Citrus Sinensis ID: 002768
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | 2.2.26 [Sep-21-2011] | |||||||
| Q43128 | 947 | ATPase 10, plasma membran | yes | no | 0.990 | 0.923 | 0.801 | 0.0 | |
| Q9M2A0 | 948 | ATPase 8, plasma membrane | no | no | 0.995 | 0.927 | 0.769 | 0.0 | |
| Q03194 | 952 | Plasma membrane ATPase 4 | N/A | no | 0.995 | 0.923 | 0.776 | 0.0 | |
| Q9SH76 | 949 | ATPase 6, plasma membrane | no | no | 0.995 | 0.926 | 0.761 | 0.0 | |
| Q7XPY2 | 951 | Plasma membrane ATPase OS | yes | no | 0.996 | 0.925 | 0.767 | 0.0 | |
| Q9SU58 | 960 | ATPase 4, plasma membrane | no | no | 0.996 | 0.916 | 0.766 | 0.0 | |
| Q9LV11 | 956 | ATPase 11, plasma membran | no | no | 0.996 | 0.920 | 0.763 | 0.0 | |
| Q9SJB3 | 949 | ATPase 5, plasma membrane | no | no | 0.996 | 0.927 | 0.750 | 0.0 | |
| Q08435 | 957 | Plasma membrane ATPase 1 | N/A | no | 0.996 | 0.919 | 0.762 | 0.0 | |
| P19456 | 948 | ATPase 2, plasma membrane | no | no | 0.987 | 0.919 | 0.767 | 0.0 |
| >sp|Q43128|PMA10_ARATH ATPase 10, plasma membrane-type OS=Arabidopsis thaliana GN=AHA10 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1432 bits (3706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/893 (80%), Positives = 791/893 (88%), Gaps = 18/893 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
QEN+F+KFL FMWNPLSWVMEAAA+MAI LAN GPDW+DF GIVCLLLIN+TISF E
Sbjct: 62 QENRFVKFLGFMWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFE 121
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LA KT+VLR+GQW+EQDA++LVPGDIISIKLGDIIPADARLLEGDP
Sbjct: 122 ENNAGNAAAALMARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDP 181
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ S LTGESLPVTKK ++VFSGSTCK GEIEAVVIATG +FFGK A LVDST+
Sbjct: 182 LKIDQ--SVLTGESLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTD 239
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
V GHFQQVLTSIGNFCICSIAVGM+LEII+MFP+QHRSYR GINNLLVLLIGGIPIAMPT
Sbjct: 240 VTGHFQQVLTSIGNFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPT 299
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVD+NLIEVF
Sbjct: 300 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVD 359
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
MDKD I+LLA RA+RLENQDAIDAAI++MLADP+EARANI+E+HFLPFNPVDKRTAITY
Sbjct: 360 YMDKDTILLLAGRASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITY 419
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDSDG WYRA+KGAPEQ+LNLC++K EIA +V+ IID+FAE+GLRSLAVA QE+ E +
Sbjct: 420 IDSDGKWYRATKGAPEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNN 479
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPGGPW FCGLLPLFDPPRHDS +TI RAL+LGVCVKMITGDQLAIAKETGRRLGM TNM
Sbjct: 480 SPGGPWRFCGLLPLFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNM 539
Query: 482 YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
YPSSSLLG + DE+EA+PVDELIE ADGFAGVFPEHKYEIVKILQE KHVVGMTGDGVND
Sbjct: 540 YPSSSLLGHNNDEHEAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVND 599
Query: 542 APALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKKADIGIAVADATDAAR +ADIVLT+PGLSVIISAVLTSRAIFQRM+NYT
Sbjct: 600 APALKKADIGIAVADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSI 659
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF LLALIWEYDFPPFMVLIIAILNDGTIMTISKDRV+PSP P+SWKLN+IFAT
Sbjct: 660 TIRIVLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFAT 719
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVT 710
GIVIGTYLALVTVLFYW++V T FFE HFHVKS+++NSE+VSSA+YLQVSIISQALIFVT
Sbjct: 720 GIVIGTYLALVTVLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVT 779
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RS+ WSF ERPG LL+ AF++AQL ATLIAVYA+ISFA I+G+GW WAGVIWLYS +FYI
Sbjct: 780 RSRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYI 839
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLDVIKF+ YALSGEAWNLV DRKTAFT KKDYGK+D + +S RS E
Sbjct: 840 PLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRSRSA-----EEL 894
Query: 831 NGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
G +SR S IAEQ RRRAEIARL E+H++ H+ESV++LK +D +I+AAHTV
Sbjct: 895 RGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 6 |
| >sp|Q9M2A0|PMA8_ARATH ATPase 8, plasma membrane-type OS=Arabidopsis thaliana GN=AHA8 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1394 bits (3608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/893 (76%), Positives = 780/893 (87%), Gaps = 14/893 (1%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFL FMWNPLSWVME+AA+MAIVLANGGG+ PDWQDF+GI+ LL+INSTISFIEE
Sbjct: 58 ENKFLKFLGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEE 117
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
NNAGNAAAALMA+LAPKTKVLR+G+W EQ+A++LVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NNAGNAAAALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPL 177
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 182
KIDQ SALTGESLP TK DEVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 178 KIDQ--SALTGESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNN 235
Query: 183 VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTV 242
VGHFQ+VLTSIGNFCICSI +GM++EI++M+PIQHR+YRDGI+NLLVLLIGGIPIAMPTV
Sbjct: 236 VGHFQKVLTSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTV 295
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302
LSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD++LIEVF +N
Sbjct: 296 LSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKN 355
Query: 303 MDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYI 362
MD D +VL+AARA+R+ENQDAIDA+I+ ML DPKEARA I EVHFLPFNPVDKRTAITYI
Sbjct: 356 MDSDSVVLMAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYI 415
Query: 363 DSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKES 422
D G+W+R+SKGAPEQI+ LC + E K H +ID FAERGLRSL VA Q V E TKES
Sbjct: 416 DESGDWHRSSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKES 475
Query: 423 PGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY 482
G PW F GLLPLFDPPRHDS +TIRRAL LGV VKMITGDQLAI ETGRRLGM TNMY
Sbjct: 476 DGSPWEFVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMY 535
Query: 483 PSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
PS+SLLG KDE+ +P+DELIE+ADGFAGVFPEHKYEIVK LQE+KH+ GMTGDGVND
Sbjct: 536 PSTSLLGNSKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVND 595
Query: 542 APALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKKADIGIAVADATDAAR A+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 596 APALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 655
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF+L+ALIW +DF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLNEIFAT
Sbjct: 656 TIRIVLGFMLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFAT 715
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVT 710
G+V+GTY+AL TVLF+W+ DTDFF F V+S+ N EE+ +ALYLQVSIISQALIFVT
Sbjct: 716 GVVLGTYMALTTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVT 775
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RS+SWSF+ERPG LL+ AFV+AQLVATLIAVYA+ FA I G GWGWAG IW+YS + YI
Sbjct: 776 RSRSWSFVERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYI 835
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLD++KFI+RYAL+G+AW+ + ++KTAFT+KKDYGK +R AQW L+ R+L GL + F
Sbjct: 836 PLDILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEAMF 895
Query: 831 NGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
N K+ S IAEQA+RRAE+ARL E+HTL+GHVESVV+LK LD++ IQ +TV
Sbjct: 896 NDNKNELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q03194|PMA4_NICPL Plasma membrane ATPase 4 OS=Nicotiana plumbaginifolia GN=PMA4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1388 bits (3592), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/899 (77%), Positives = 794/899 (88%), Gaps = 20/899 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
E+K LKFL FMWNPLSWVMEAAAVMAI LANG G+ PDWQDF+GI+CLL+INSTISFIE
Sbjct: 57 NESKILKFLGFMWNPLSWVMEAAAVMAIALANGDGKPPDWQDFIGIICLLVINSTISFIE 116
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPKTKVLR+G+W EQ+AA+LVPGDIIS+KLGDIIPADARLLEGDP
Sbjct: 117 ENNAGNAAAALMAGLAPKTKVLRDGRWSEQEAAILVPGDIISVKLGDIIPADARLLEGDP 176
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ SALTGESLPVTK DEVFSGSTCK GE+EAVVIATGVH+FFGKAAHLVDST
Sbjct: 177 LKIDQ--SALTGESLPVTKNPGDEVFSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTN 234
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
VGHFQ+VLT+IGNFCICSIA+GM++EIIVM+PIQHR YRDGI+NLLVLLIGGIPIAMPT
Sbjct: 235 NVGHFQKVLTAIGNFCICSIAIGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPT 294
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VDRNL+EVF +
Sbjct: 295 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAK 354
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+DK+ ++LLAARA+R+ENQDAIDA ++ MLADPKEARA I+EVHFLPFNPVDKRTA+TY
Sbjct: 355 GVDKEYVLLLAARASRVENQDAIDACMVGMLADPKEARAGIREVHFLPFNPVDKRTALTY 414
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID++ NW+RASKGAPEQIL+LC K+++ KVH+++DK+AERGLRSLAVA + V E +KE
Sbjct: 415 IDNNNNWHRASKGAPEQILDLCNAKEDVRRKVHSMMDKYAERGLRSLAVARRTVPEKSKE 474
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPGG W F GLLPLFDPPRHDS +TIRRALNLGV VKMITGDQLAIAKETGRRLGM TNM
Sbjct: 475 SPGGRWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM 534
Query: 482 YPSSSLLGRDKDENEA-LPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPS+SLLG+DKD A LP++ELIE+ADGFAGVFPEHKYEIVK LQE+KH+VGMTGDGVN
Sbjct: 535 YPSASLLGQDKDSAIASLPIEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVN 594
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALKKADIGIAVADATDAARGA+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 595 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 654
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+ +ALIW+YDF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFA
Sbjct: 655 ITIRIVFGFMFIALIWKYDFSAFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFA 714
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709
TG+V+G Y AL+TV+F+W + DTDFF F VKSL ++ EE+ SALYLQVSIISQALIFV
Sbjct: 715 TGVVLGGYQALMTVVFFWAMHDTDFFSDKFGVKSLRNSDEEMMSALYLQVSIISQALIFV 774
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWSFLERPG LL+ AF++AQLVATLIAVYA+ +FA + G GWGWAGVIWLYS +FY
Sbjct: 775 TRSRSWSFLERPGMLLVIAFMIAQLVATLIAVYANWAFARVKGCGWGWAGVIWLYSIIFY 834
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLI---GT 826
+PLD++KF +RY LSG+AWN + D KTAFT+KKDYGKE+R AQW L+ R+L GL T
Sbjct: 835 LPLDIMKFAIRYILSGKAWNNLLDNKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPEAT 894
Query: 827 DLEFNGRKSRPSL--IAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
+L FN + S L IAEQA+RRAE+ARL E+HTL+GHVESVV+LK LD+ IQ +TV
Sbjct: 895 NL-FNEKNSYRELSEIAEQAKRRAEMARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 952
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SH76|PMA6_ARATH ATPase 6, plasma membrane-type OS=Arabidopsis thaliana GN=AHA6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1379 bits (3568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/894 (76%), Positives = 769/894 (86%), Gaps = 15/894 (1%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFL FMWNPLSWVMEAAA+MAIVLANGGG+ PDWQDFVGI CLL+INSTISFIEE
Sbjct: 58 ENKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEE 117
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
NNAGNAAAALMA+LAPKTKVLR+G+W EQ+AA+LVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NNAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPL 177
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 182
KIDQ SALTGESLP TK DEVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 178 KIDQ--SALTGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNN 235
Query: 183 VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTV 242
VGHFQ+VLT+IGNFCICSI +GM++EII+M+PIQHR YRDGI+NLLVLLIGGIPIAMPTV
Sbjct: 236 VGHFQKVLTAIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTV 295
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302
LSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+LTVD+NLIEVF+++
Sbjct: 296 LSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKD 355
Query: 303 MDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYI 362
+DKD ++LL+ARA+R+ENQDAID +I+NML DPKEARA I EVHFLPFNPV+KRTAITYI
Sbjct: 356 VDKDYVILLSARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYI 415
Query: 363 DSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKES 422
D++G W+R SKGAPEQI+ LC K E + H IIDKFAERGLRSL VA Q V E KES
Sbjct: 416 DTNGEWHRCSKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKES 475
Query: 423 PGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY 482
G PW F GLLPLFDPPRHDS +TIRRAL+LGV VKMITGDQLAI KETGRRLGM TNMY
Sbjct: 476 AGTPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY 535
Query: 483 PSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDA 542
PSSSLL D +PVDELIE+ADGFAGVFPEHKYEIV+ LQE+KH+VGMTGDGVNDA
Sbjct: 536 PSSSLLENKDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDA 595
Query: 543 PALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------- 595
PALKKADIGIAV DATDAAR A+DIVLTEPGLSVI+SAVLTSRAIFQRMKNYT
Sbjct: 596 PALKKADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIT 655
Query: 596 ----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFATG 651
LGF+L+ALIWE+DF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATG
Sbjct: 656 IRIVLGFMLVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATG 715
Query: 652 IVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVTR 711
+V+GTY+ALVTV+F+W+ DT FF F V+SL EE+ + LYLQVSIISQALIFVTR
Sbjct: 716 VVLGTYMALVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTR 775
Query: 712 SQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIP 771
S+SWSF+ERPG LL+ AF VAQL+ATLIA YAH FA I G GWGW GVIW+YS V YIP
Sbjct: 776 SRSWSFVERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIP 835
Query: 772 LDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFN 831
LD++KFI RY LSG+AWN + + +TAFT+KKDYG+ +R AQW L+ R+L GL + F
Sbjct: 836 LDILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPESMFE 895
Query: 832 GRKSRPSL--IAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
+ L IAEQA++RAE+ARL E+HTL+GHVESVV+LK LD++ + +TV
Sbjct: 896 DTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q7XPY2|PMA1_ORYSJ Plasma membrane ATPase OS=Oryza sativa subsp. japonica GN=Os04g0656100 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1378 bits (3566), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/900 (76%), Positives = 789/900 (87%), Gaps = 20/900 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+K LKFL FMWNPLSWVME AA+MAI LANGGG+ PDW+DFVGI+ LL+INSTISFIE
Sbjct: 54 KESKILKFLGFMWNPLSWVMEMAAIMAIALANGGGKPPDWEDFVGIIVLLVINSTISFIE 113
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA+LAPKTKVLR+G+W EQ+AA+LVPGDIISIKLGDI+PADARLLEGDP
Sbjct: 114 ENNAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDIISIKLGDIVPADARLLEGDP 173
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ SALTGESLPVTK DEVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 174 LKIDQ--SALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 231
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
VGHFQ VLT+IGNFCICSIAVG+++EIIVMFPIQHR+YR GI NLLVLLIGGIPIAMPT
Sbjct: 232 QVGHFQTVLTAIGNFCICSIAVGIVIEIIVMFPIQHRAYRSGIENLLVLLIGGIPIAMPT 291
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD+NL+EVF +
Sbjct: 292 VLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFTK 351
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+DKD ++LLAARA+R ENQDAIDAA++ MLADPKEARA I+EVHFLPFNPVDKRTA+TY
Sbjct: 352 GVDKDHVLLLAARASRTENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTY 411
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID+DGNW+RASKGAPEQIL LC K+++ KVH +IDK+AERGLRSLAVA QEV E +KE
Sbjct: 412 IDADGNWHRASKGAPEQILTLCNCKEDVKRKVHAVIDKYAERGLRSLAVARQEVPEKSKE 471
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
S GGPW F GLLPLFDPPRHDS +TIR+AL+LGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 472 SAGGPWQFVGLLPLFDPPRHDSAETIRKALHLGVNVKMITGDQLAIGKETGRRLGMGTNM 531
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG++KD + EALPVDELIE+ADGFAGVFPEHKYEIVK LQEKKH+VGMTGDGVN
Sbjct: 532 YPSSALLGQNKDASLEALPVDELIEKADGFAGVFPEHKYEIVKRLQEKKHIVGMTGDGVN 591
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----- 595
DAPALKKADIGIAVADATDAAR A+DIVLTEPGLSVIISAVLTSR IFQRMKNYT
Sbjct: 592 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRCIFQRMKNYTIYAVS 651
Query: 596 ------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
LGF+L+ALIW+YDF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFA
Sbjct: 652 ITIRIVLGFLLIALIWKYDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFA 711
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709
TGIV+G+YLAL+TV+F+W + TDFF F V+S+ ++ E+ SALYLQVSI+SQALIFV
Sbjct: 712 TGIVLGSYLALMTVIFFWAMHKTDFFTDKFGVRSIRNSEHEMMSALYLQVSIVSQALIFV 771
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWSF+ERPG LL+ AF++AQLVAT +AVYA+ FA I G+GWGWAGVIWLYS VFY
Sbjct: 772 TRSRSWSFIERPGLLLVTAFMLAQLVATFLAVYANWGFARIKGIGWGWAGVIWLYSIVFY 831
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGL----IG 825
PLD+ KF +R+ LSG AW+ + + K AFT+KKDYG+E+R AQW + R+L GL +
Sbjct: 832 FPLDIFKFFIRFVLSGRAWDNLLENKIAFTTKKDYGREEREAQWATAQRTLHGLQPPEVA 891
Query: 826 TDLEFNGRKSRPSL--IAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
++ FN + S L IAEQA+RRAEIARL E++TL+GHVESVV+LK LD++ IQ +TV
Sbjct: 892 SNTLFNDKSSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQNYTV 951
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SU58|PMA4_ARATH ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=AHA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1370 bits (3547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 691/901 (76%), Positives = 785/901 (87%), Gaps = 21/901 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+KFLKFL FMWNPLSWVMEAAA+MAI LANGGG+ PDWQDFVGI+ LL+INSTISFIE
Sbjct: 62 KESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIE 121
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPK KVLR+G+W EQDAA+LVPGDIISIKLGDI+PADARLLEGDP
Sbjct: 122 ENNAGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDP 181
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ SALTGESLPVTK + D V+SGSTCK GEIEAVVIATGVH+FFGKAAHLVD+T
Sbjct: 182 LKIDQ--SALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN 239
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
+GHFQQVLT+IGNFCICSIAVGM++EI+VM+PIQHR+YR GI+NLLVLLIGGIPIAMPT
Sbjct: 240 QIGHFQQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPT 299
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+LTVD+NLIEVF +
Sbjct: 300 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMK 359
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+D D +VL+AARA+RLENQDAIDAAI+ MLADPK+ARA I+EVHFLPFNP DKRTA+TY
Sbjct: 360 GVDADTVVLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTY 419
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID++GN +R SKGAPEQILNL K EI +VH +IDKFAERGLRSLAVA Q+V E K+
Sbjct: 420 IDNEGNTHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKD 479
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
S GGPW F GL+PLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 480 SAGGPWQFVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNM 539
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG++KDE+ ALPVDELIE+ADGFAGVFPEHKYEIVK LQ +KH+ GMTGDGVN
Sbjct: 540 YPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 599
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----- 595
DAPALKKADIGIAVADATDAAR A+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 600 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 659
Query: 596 ------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
LGF+LLALIW++DFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFA
Sbjct: 660 ITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFA 719
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEE----VSSALYLQVSIISQA 705
TG+V G+Y+A++TV+F+WV TDFF F V +L + + ++SA+YLQVSIISQA
Sbjct: 720 TGVVFGSYMAMMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQA 779
Query: 706 LIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYS 765
LIFVTRS+SWSF+ERPG LM AF++AQLVATLIAVYA+ SFA I G+GWGWAGVIWLY+
Sbjct: 780 LIFVTRSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYN 839
Query: 766 FVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIG 825
+FYIPLD IKF +RYALSG AW+LV +++ AFT +KD+GKE R QW + R+L GL
Sbjct: 840 IIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQA 899
Query: 826 TDLE-FNGRK--SRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHT 882
D + F R S + +AE+A+RRAEIARL E+HTL+GHVESVVRLK LD+ IQ A+T
Sbjct: 900 PDTKMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYT 959
Query: 883 V 883
V
Sbjct: 960 V 960
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9LV11|PMA11_ARATH ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=AHA11 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1368 bits (3542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/901 (76%), Positives = 784/901 (87%), Gaps = 21/901 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+KFLKFL FMWNPLSWVMEAAA+MAI LANGGG+ PDWQDFVGI+ LL+INSTISFIE
Sbjct: 58 KESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIE 117
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPK KVLR+G+W EQDAA+LVPGDIISIKLGDI+PADARLLEGDP
Sbjct: 118 ENNAGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDP 177
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ+S LTGESLPVTK D V+SGSTCK GE+EAVVIATGVH+FFGKAAHLVD+T
Sbjct: 178 LKIDQSS--LTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTN 235
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
VGHFQQVLT+IGNFCICSIAVGMI+EI+VM+PIQHR+YR GI+NLLVLLIGGIPIAMPT
Sbjct: 236 HVGHFQQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPT 295
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+LTVD+NLIEVF +
Sbjct: 296 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK 355
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+D D +VL+AA+A+RLENQDAIDAAI+ MLADPKEARA ++EVHFLPFNP DKRTA+TY
Sbjct: 356 GVDADTVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTY 415
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDSDG +R SKGAPEQILNL + EI +VH +IDKFAERGLRSLAVA QEV E TKE
Sbjct: 416 IDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKE 475
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
S GGPW F GL+PLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 476 SAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 535
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG+ KDE+ ALP+D+LIE+ADGFAGVFPEHKYEIVK LQ +KH+ GMTGDGVN
Sbjct: 536 YPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----- 595
DAPALKKADIGIAVADATDAAR A+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 596 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655
Query: 596 ------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
LGF+LLALIW++DFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFA
Sbjct: 656 ITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFA 715
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEE----VSSALYLQVSIISQA 705
TG+V G+Y+A++TV+F+W TDFF F V +L + + ++SA+YLQVSIISQA
Sbjct: 716 TGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQA 775
Query: 706 LIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYS 765
LIFVTRS+SWS++ERPG LL+ AF++AQLVATLIAVYA+ SFA I G+GWGWAGVIWLY+
Sbjct: 776 LIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYN 835
Query: 766 FVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIG 825
VFYIPLD+IKF++RYALSG AW+LV +++ AFT +KD+GKE R QW + R+L GL
Sbjct: 836 IVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQA 895
Query: 826 TDLEFNGRKSR---PSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHT 882
D + ++ S +AE+A+RRAEIARL E+HTL+GHVESVVRLK LD+ IQ A+T
Sbjct: 896 PDAKMFPERTHFNELSQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIETIQQAYT 955
Query: 883 V 883
V
Sbjct: 956 V 956
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q9SJB3|PMA5_ARATH ATPase 5, plasma membrane-type OS=Arabidopsis thaliana GN=AHA5 PE=3 SV=3 | Back alignment and function description |
|---|
Score = 1361 bits (3523), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/898 (75%), Positives = 778/898 (86%), Gaps = 18/898 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+K LKFL FMWNPLSWVME AA+MAI LANGGG+ PDWQDFVGIVCLLLINSTISFIE
Sbjct: 54 KESKLLKFLGFMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIE 113
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPKTKVLR+ QW EQ+A++LVPGD+ISIKLGDIIPADARLL+GDP
Sbjct: 114 ENNAGNAAAALMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDP 173
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ+S LTGES+PVTK +DEVFSGS CK GEIEA+VIATGVH+FFGKAAHLVD+T
Sbjct: 174 LKIDQSS--LTGESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTN 231
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
+GHFQ+VLTSIGNFCICSIA+G+I+E++VM+PIQ R YRDGI+NLLVLLIGGIPIAMP+
Sbjct: 232 QIGHFQKVLTSIGNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPS 291
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+A GSHRL QQGAITKRMTAIEEMAGMDVLC DKTGTLTLN+LTVD+NL+EVF +
Sbjct: 292 VLSVTMATGSHRLFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAK 351
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+ K+ + LLAARA+R+ENQDAIDAAI+ MLADPKEARA ++EVHF PFNPVDKRTA+TY
Sbjct: 352 GVGKEHVFLLAARASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTY 411
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
+DSDGNW+RASKGAPEQILNLC K+++ KVH +IDKFAERGLRSLAVA QEV E K+
Sbjct: 412 VDSDGNWHRASKGAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKD 471
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
+PGGPW GLLPLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 472 APGGPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 531
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG+ KD + ALPVDELIE+ADGFAGVFPEHKYEIV LQ++ H+ GMTGDGVN
Sbjct: 532 YPSSALLGQVKDSSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVN 591
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALKKADIGIAV DATDAARGA+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 592 DAPALKKADIGIAVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 651
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+ +ALIW++DF PFMVLIIAILNDGTIMTISKDR+KPSP+PDSWKL +IF+
Sbjct: 652 ITIRIVFGFMFIALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFS 711
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709
TG+V+G Y AL+TV+F+WV+ D+DFF +F V+ LS E++ +ALYLQVSIISQALIFV
Sbjct: 712 TGVVLGGYQALMTVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFV 771
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWS+ E PG LL+ AFV+AQLVAT IAVYA+ SFA I G GWGWAGVIWLYSF+ Y
Sbjct: 772 TRSRSWSYAECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTY 831
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLE 829
IPLD++KF +RY LSG+AW + + KTAFT+KKDYGKE+R AQW + R+L GL +
Sbjct: 832 IPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKN 891
Query: 830 --FNGRKSRPSL--IAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
FN + S L IAEQA+RRAE+ RL EI+TL+GHVESVV+LK LD++ IQ +TV
Sbjct: 892 NIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|Q08435|PMA1_NICPL Plasma membrane ATPase 1 OS=Nicotiana plumbaginifolia GN=PMA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1357 bits (3512), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/901 (76%), Positives = 777/901 (86%), Gaps = 21/901 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+++K LKFL FMWNPLSWVMEAAA+MAI LANGGG+ PDWQDFVGI+ LL+INSTISFIE
Sbjct: 59 KDSKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLIINSTISFIE 118
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPK KVLR+G+WKE+DAAVLVPGDIISIKLGDIIPADARLLEGDP
Sbjct: 119 ENNAGNAAAALMARLAPKAKVLRDGRWKEEDAAVLVPGDIISIKLGDIIPADARLLEGDP 178
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ SALTGESLPVTK D V+SGSTCK GEIEA+VIATGVH+FFGKAAHLVDST
Sbjct: 179 LKIDQ--SALTGESLPVTKGPGDGVYSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTN 236
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
VGHFQ+VLT+IGNFCICSIAVGMI+EIIVM+PIQHR+YR GI+NLLVLLIGGIPIAMPT
Sbjct: 237 QVGHFQKVLTAIGNFCICSIAVGMIIEIIVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPT 296
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+LTVD+NLIEVF +
Sbjct: 297 VLSVTMAIGSHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAK 356
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+D DM+VL+AARA+R ENQDAIDAAI+ MLADPKEARA I+E+HFLPFNP DKRTA+TY
Sbjct: 357 GVDADMVVLMAARASRTENQDAIDAAIVGMLADPKEARAGIREIHFLPFNPTDKRTALTY 416
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
+D +G +R SKGAPEQILNL K +I +VH +IDKFAERGLRSL VA QEV E KE
Sbjct: 417 LDGEGKMHRVSKGAPEQILNLAHNKSDIERRVHAVIDKFAERGLRSLGVAYQEVPEGRKE 476
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
S GGPW F GLLPLFDPPRHDS +TIRRALNLGV VKM+TGDQLAI KETGRRLGM TNM
Sbjct: 477 SAGGPWQFIGLLPLFDPPRHDSAETIRRALNLGVNVKMVTGDQLAIGKETGRRLGMGTNM 536
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG+ KDE+ ALP+DELIE+ADGFAGVFPEHKYEIVK LQ +KH+ GMTGDGVN
Sbjct: 537 YPSSALLGQTKDESISALPIDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 596
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----- 595
DAPALKKADIGIAV DATDAAR A+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 597 DAPALKKADIGIAVDDATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 656
Query: 596 ------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
LGF+LLALIW++DFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIF
Sbjct: 657 ITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFT 716
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNS----EEVSSALYLQVSIISQA 705
TGIV+G YLA++TV+F+W T+FF F V +L + +++SA+YLQVSIISQA
Sbjct: 717 TGIVLGGYLAMMTVIFFWAAYKTNFFPHVFGVSTLEKTATDDFRKLASAIYLQVSIISQA 776
Query: 706 LIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYS 765
LIFVTRS+SWSF+ERPG LL+ AFV+AQLVATLIAVYA+ SFA I G+GWGWAGVIW+Y+
Sbjct: 777 LIFVTRSRSWSFVERPGFLLVIAFVIAQLVATLIAVYANWSFAAIEGIGWGWAGVIWIYN 836
Query: 766 FVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIG 825
VFYIPLD+IKF +RYALSG AW+LVF+R+ AFT KKD+GKE R QW + R+L GL
Sbjct: 837 LVFYIPLDIIKFFIRYALSGRAWDLVFERRIAFTRKKDFGKEQRELQWAHAQRTLHGLQV 896
Query: 826 TDLEFNGRKS---RPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHT 882
D + + + +AE+A+RRAEIARL E+HTL+GHVESVV+LK LD+ IQ A+T
Sbjct: 897 PDTKLFSEATNFNELNQLAEEAKRRAEIARLRELHTLKGHVESVVKLKGLDIETIQQAYT 956
Query: 883 V 883
V
Sbjct: 957 V 957
|
The plasma membrane ATPase of plants and fungi is a hydrogen ion pump. The proton gradient it generates drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Nicotiana plumbaginifolia (taxid: 4092) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
| >sp|P19456|PMA2_ARATH ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=AHA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 1353 bits (3502), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 683/890 (76%), Positives = 768/890 (86%), Gaps = 18/890 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+K LKFL FMWNPLSWVME AA+MAI LANG G+ PDWQDFVGI+CLL+INSTISFIE
Sbjct: 54 KESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIE 113
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPKTKVLR+G+W EQ+AA+LVPGDI+SIKLGDIIPADARLLEGDP
Sbjct: 114 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP 173
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LK+DQ SALTGESLPVTK EVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 174 LKVDQ--SALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 231
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
VGHFQ+VLT+IGNFCICSIA+GM++EIIVM+PIQ R YRDGI+NLLVLLIGGIPIAMPT
Sbjct: 232 QVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPT 291
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD+NL+EVF +
Sbjct: 292 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCK 351
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
++KD ++L AA A+R+ENQDAIDAA++ MLADPKEARA I+EVHFLPFNPVDKRTA+TY
Sbjct: 352 GVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTY 411
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID GNW+R SKGAPEQIL L K +++ KV +IIDK+AERGLRSLAVA Q V E TKE
Sbjct: 412 IDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKE 471
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPG PW F GLLPLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 472 SPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 531
Query: 482 YPSSSLLGRDKDENEA-LPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG KD N A +PV+ELIE+ADGFAGVFPEHKYEIVK LQE+KH+VGMTGDGVN
Sbjct: 532 YPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVN 591
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALKKADIGIAVADATDAARGA+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 592 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 651
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+L+ALIWE+DF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFA
Sbjct: 652 ITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFA 711
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709
TG+V+G Y A++TV+F+W TDFF F V+S+ N+ E+ A+YLQVSIISQALIFV
Sbjct: 712 TGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFV 771
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWSF+ERPGALLM AF++AQL+ATLIAVYA+ FA I G+GWGWAGVIWLYS V Y
Sbjct: 772 TRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTY 831
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTD-- 827
PLDV KF +RY LSG+AW +F+ KTAFT KKDYGKE+R AQW L+ R+L GL +
Sbjct: 832 FPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWALAQRTLHGLQPKEAV 891
Query: 828 --LEFNGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLN 875
G S IAEQA+RRAEIARL E+HTL+GHVESVV+LK LD+
Sbjct: 892 NIFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVVKLKGLDIE 941
|
The plasma membrane H(+) ATPase of plants and fungi generates a proton gradient that drives the active transport of nutrients by H(+)-symport. The resulting external acidification and/or internal alkinization may mediate growth responses. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 6 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | ||||||
| 224138528 | 950 | autoinhibited H+ ATPase [Populus trichoc | 0.993 | 0.923 | 0.891 | 0.0 | |
| 359482987 | 952 | PREDICTED: ATPase 10, plasma membrane-ty | 0.992 | 0.920 | 0.891 | 0.0 | |
| 297742915 | 970 | unnamed protein product [Vitis vinifera] | 0.992 | 0.903 | 0.874 | 0.0 | |
| 84627379 | 950 | P-type ATPase [Petunia x hybrida] gi|115 | 0.994 | 0.924 | 0.864 | 0.0 | |
| 5669167 | 950 | plasma membrane proton ATPase [Nicotiana | 0.994 | 0.924 | 0.852 | 0.0 | |
| 147853720 | 938 | hypothetical protein VITISV_027896 [Viti | 0.967 | 0.910 | 0.876 | 0.0 | |
| 356506116 | 934 | PREDICTED: ATPase 10, plasma membrane-ty | 0.976 | 0.922 | 0.851 | 0.0 | |
| 42562116 | 947 | H+-transporting ATPase [Arabidopsis thal | 0.990 | 0.923 | 0.801 | 0.0 | |
| 75214754 | 948 | putative plasma membrane ATPase [Capsell | 0.995 | 0.927 | 0.765 | 0.0 | |
| 225446002 | 954 | PREDICTED: plasma membrane ATPase 4 isof | 0.996 | 0.922 | 0.783 | 0.0 |
| >gi|224138528|ref|XP_002326625.1| autoinhibited H+ ATPase [Populus trichocarpa] gi|222833947|gb|EEE72424.1| autoinhibited H+ ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1635 bits (4234), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 795/892 (89%), Positives = 847/892 (94%), Gaps = 15/892 (1%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFL FMWNPLSWVMEAAA+MAI LANGGGQGPDWQDFVGI+CLL+INSTISF+EE
Sbjct: 63 ENKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGQGPDWQDFVGIICLLIINSTISFVEE 122
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
NNAGNAA+ALMA LAPKTKVLR+GQWKEQDAA+LVPGDIISIKLGDIIPAD+RLLEGD L
Sbjct: 123 NNAGNAASALMARLAPKTKVLRDGQWKEQDAAILVPGDIISIKLGDIIPADSRLLEGDSL 182
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 182
KIDQA+ LTGESLPVTK+T DEV+SGSTCK GEIEAVVIATGV+SFFGKAAHLVDSTEV
Sbjct: 183 KIDQAT--LTGESLPVTKRTGDEVYSGSTCKQGEIEAVVIATGVNSFFGKAAHLVDSTEV 240
Query: 183 VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTV 242
VGHFQ+VLT+IGNFCICSIAVGMILEII+MFP+QHRSYRDGINNLLVLLIGGIPIAMPTV
Sbjct: 241 VGHFQKVLTAIGNFCICSIAVGMILEIIIMFPVQHRSYRDGINNLLVLLIGGIPIAMPTV 300
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302
LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFN++
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNKD 360
Query: 303 MDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYI 362
MDKDMIVLLAARA+RLENQDAIDAAI+NMLADPKEAR NI+EVHFLPFNPVDKRTAITYI
Sbjct: 361 MDKDMIVLLAARASRLENQDAIDAAIVNMLADPKEARENIREVHFLPFNPVDKRTAITYI 420
Query: 363 DSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKES 422
DSDGNWYRASKGAPEQILN+ KEK EI+ KVH II+KFAERGLRSL VA QEV E T+ES
Sbjct: 421 DSDGNWYRASKGAPEQILNMSKEKDEISGKVHAIIEKFAERGLRSLGVAFQEVPEKTRES 480
Query: 423 PGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY 482
PGGPWTFCGLLPLFDPPRHDS +TIRRALNLGV VKMITGDQLAIAKETGRRLGM TNMY
Sbjct: 481 PGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMY 540
Query: 483 PSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDA 542
PSS+LLGRD+DENEALPVDELIE+ADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDA
Sbjct: 541 PSSTLLGRDRDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDA 600
Query: 543 PALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------- 595
PALKKADIGIAVAD+TDAAR A+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 601 PALKKADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT 660
Query: 596 ----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFATG 651
LGF LLALIWEYDFPPFMVLIIAILNDGTIMTIS+DRVKPSPRPDSWKL EIFATG
Sbjct: 661 IRIVLGFALLALIWEYDFPPFMVLIIAILNDGTIMTISQDRVKPSPRPDSWKLEEIFATG 720
Query: 652 IVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVTR 711
IVIGTYLALVTVLFYW+V+DT+FFETHFHV+S+SSN+EEVSSA+YLQVSIISQALIFVTR
Sbjct: 721 IVIGTYLALVTVLFYWIVIDTNFFETHFHVRSISSNTEEVSSAVYLQVSIISQALIFVTR 780
Query: 712 SQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIP 771
SQSWSFLERPG LLMCAFVVAQLVAT+IAVYAHISFAYI G+GWGWAGVIWLYS VFY+P
Sbjct: 781 SQSWSFLERPGILLMCAFVVAQLVATIIAVYAHISFAYIRGIGWGWAGVIWLYSLVFYVP 840
Query: 772 LDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFN 831
LD+IKF +RYALSGEAWNL+FDRKTAF+SKKDYGKEDR A+WILS RSLQGL+ TD +FN
Sbjct: 841 LDIIKFTIRYALSGEAWNLLFDRKTAFSSKKDYGKEDREAKWILSQRSLQGLMATDQDFN 900
Query: 832 GRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
GR+S +LIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLN+IQ AHTV
Sbjct: 901 GRRS--TLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNLIQTAHTV 950
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359482987|ref|XP_002263048.2| PREDICTED: ATPase 10, plasma membrane-type-like isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1605 bits (4156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/895 (89%), Positives = 844/895 (94%), Gaps = 19/895 (2%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG+GPDWQDFVGI+CLL+INSTISFIEE
Sbjct: 63 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGEGPDWQDFVGILCLLIINSTISFIEE 122
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
NNAGNAAAALMA LAPKTKVLR+G W+EQDAA+LVPGDIISIKLGDIIPADARLLEGDPL
Sbjct: 123 NNAGNAAAALMARLAPKTKVLRDGHWQEQDAAILVPGDIISIKLGDIIPADARLLEGDPL 182
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 182
KIDQ SALTGESLPVTK+T DEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV
Sbjct: 183 KIDQ--SALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 240
Query: 183 VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTV 242
+GHFQ+VLTSIGNFCICSIAVGMILEIIVMFPIQHRSYR+GINNLLVLLIGGIPIAMPTV
Sbjct: 241 IGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRNGINNLLVLLIGGIPIAMPTV 300
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302
LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVF ++
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFAKD 360
Query: 303 MDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYI 362
MDKD +VLLAARA+RLENQDAID AIINMLADPKEARANI EVHFLPFNPVDKRTAITYI
Sbjct: 361 MDKDTVVLLAARASRLENQDAIDTAIINMLADPKEARANITEVHFLPFNPVDKRTAITYI 420
Query: 363 DSDGNWYRASKGAPEQ---ILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMT 419
DS+GNW RASKGAPEQ ILNLC+EK+EIA KVH IIDKFAERGLRSL VA QEV E T
Sbjct: 421 DSNGNWIRASKGAPEQYPHILNLCQEKEEIAGKVHAIIDKFAERGLRSLGVAYQEVPEQT 480
Query: 420 KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT 479
KESPGGPWTFCGLLPLFDPPRHDS +TIRRALNLGVCVKMITGDQLAIAKETGRRLGM T
Sbjct: 481 KESPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGT 540
Query: 480 NMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGV 539
NMYPSSSLLGR+KDE+E LPVDELIE+ADGFAGVFPEHKYEIV+ILQEKKHV GMTGDGV
Sbjct: 541 NMYPSSSLLGREKDESEVLPVDELIEKADGFAGVFPEHKYEIVRILQEKKHVCGMTGDGV 600
Query: 540 NDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT---- 595
NDAPALKKADIGIAVADATDAAR AADIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 601 NDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAV 660
Query: 596 -------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIF 648
LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSP+PDSWKLNEIF
Sbjct: 661 SITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPKPDSWKLNEIF 720
Query: 649 ATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIF 708
ATG+VIGTYLALVTVLFYWV+ T FF+THFHV +L S +EE+SSA+YLQVSIISQALIF
Sbjct: 721 ATGVVIGTYLALVTVLFYWVIDSTTFFQTHFHVSTLKS-TEEISSAIYLQVSIISQALIF 779
Query: 709 VTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVF 768
VTRSQSWSF+ERPGALLMCAFVVAQLVATLIAVYA ISFA ISG+GWGWAGVIW+YS +F
Sbjct: 780 VTRSQSWSFMERPGALLMCAFVVAQLVATLIAVYAEISFASISGIGWGWAGVIWIYSVIF 839
Query: 769 YIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDL 828
Y+PLD+IKF VRYALSGEAWNL+FDRKTAFTSKKDYGKEDR A+W+LS R++QGL+ ++L
Sbjct: 840 YVPLDIIKFTVRYALSGEAWNLLFDRKTAFTSKKDYGKEDREAKWVLSQRTIQGLMSSEL 899
Query: 829 EFNGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
E NGR+S SLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLD+NVIQAAHTV
Sbjct: 900 EINGRRS--SLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDINVIQAAHTV 952
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297742915|emb|CBI35782.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1599 bits (4141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 798/913 (87%), Positives = 844/913 (92%), Gaps = 37/913 (4%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG+GPDWQDFVGI+CLL+INSTISFIEE
Sbjct: 63 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGEGPDWQDFVGILCLLIINSTISFIEE 122
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
NNAGNAAAALMA LAPKTKVLR+G W+EQDAA+LVPGDIISIKLGDIIPADARLLEGDPL
Sbjct: 123 NNAGNAAAALMARLAPKTKVLRDGHWQEQDAAILVPGDIISIKLGDIIPADARLLEGDPL 182
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 182
KIDQ SALTGESLPVTK+T DEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV
Sbjct: 183 KIDQ--SALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 240
Query: 183 VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTV 242
+GHFQ+VLTSIGNFCICSIAVGMILEIIVMFPIQHRSYR+GINNLLVLLIGGIPIAMPTV
Sbjct: 241 IGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRNGINNLLVLLIGGIPIAMPTV 300
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302
LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVF ++
Sbjct: 301 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFAKD 360
Query: 303 MDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYI 362
MDKD +VLLAARA+RLENQDAID AIINMLADPKEARANI EVHFLPFNPVDKRTAITYI
Sbjct: 361 MDKDTVVLLAARASRLENQDAIDTAIINMLADPKEARANITEVHFLPFNPVDKRTAITYI 420
Query: 363 DSDGNWYRASKGAPEQ---------------------ILNLCKEKKEIAVKVHTIIDKFA 401
DS+GNW RASKGAPEQ ILNLC+EK+EIA KVH IIDKFA
Sbjct: 421 DSNGNWIRASKGAPEQYPHHSKKKKKQNKNSRFSFLYILNLCQEKEEIAGKVHAIIDKFA 480
Query: 402 ERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMIT 461
ERGLRSL VA QEV E TKESPGGPWTFCGLLPLFDPPRHDS +TIRRALNLGVCVKMIT
Sbjct: 481 ERGLRSLGVAYQEVPEQTKESPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMIT 540
Query: 462 GDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEI 521
GDQLAIAKETGRRLGM TNMYPSSSLLGR+KDE+E LPVDELIE+ADGFAGVFPEHKYEI
Sbjct: 541 GDQLAIAKETGRRLGMGTNMYPSSSLLGREKDESEVLPVDELIEKADGFAGVFPEHKYEI 600
Query: 522 VKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAV 581
V+ILQEKKHV GMTGDGVNDAPALKKADIGIAVADATDAAR AADIVLTEPGLSVIISAV
Sbjct: 601 VRILQEKKHVCGMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAV 660
Query: 582 LTSRAIFQRMKNYT-----------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISK 630
LTSRAIFQRMKNYT LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISK
Sbjct: 661 LTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISK 720
Query: 631 DRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEE 690
DRVKPSP+PDSWKLNEIFATG+VIGTYLALVTVLFYWV+ T FF+THFHV +L S +EE
Sbjct: 721 DRVKPSPKPDSWKLNEIFATGVVIGTYLALVTVLFYWVIDSTTFFQTHFHVSTLKS-TEE 779
Query: 691 VSSALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYI 750
+SSA+YLQVSIISQALIFVTRSQSWSF+ERPGALLMCAFVVAQLVATLIAVYA ISFA I
Sbjct: 780 ISSAIYLQVSIISQALIFVTRSQSWSFMERPGALLMCAFVVAQLVATLIAVYAEISFASI 839
Query: 751 SGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRA 810
SG+GWGWAGVIW+YS +FY+PLD+IKF VRYALSGEAWNL+FDRKTAFTSKKDYGKEDR
Sbjct: 840 SGIGWGWAGVIWIYSVIFYVPLDIIKFTVRYALSGEAWNLLFDRKTAFTSKKDYGKEDRE 899
Query: 811 AQWILSHRSLQGLIGTDLEFNGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLK 870
A+W+LS R++QGL+ ++LE NGR+S SLIAEQARRRAEIARLGEIHTLRGHVESVVRLK
Sbjct: 900 AKWVLSQRTIQGLMSSELEINGRRS--SLIAEQARRRAEIARLGEIHTLRGHVESVVRLK 957
Query: 871 NLDLNVIQAAHTV 883
NLD+NVIQAAHTV
Sbjct: 958 NLDINVIQAAHTV 970
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|84627379|gb|ABC59935.1| P-type ATPase [Petunia x hybrida] gi|115493785|gb|ABI98399.1| P-type ATPase [Petunia x hybrida] | Back alignment and taxonomy information |
|---|
Score = 1555 bits (4025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 772/893 (86%), Positives = 828/893 (92%), Gaps = 15/893 (1%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+ENKF+KFL FMWNPLSWVMEAAA+MAI LANGGGQGPDWQDFVGIVCLLLINSTISFIE
Sbjct: 62 RENKFIKFLGFMWNPLSWVMEAAAIMAIALANGGGQGPDWQDFVGIVCLLLINSTISFIE 121
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAP+TKVLR+G+W+E+DAA+LVPGDIISIKLGDIIPADARLLEGDP
Sbjct: 122 ENNAGNAAAALMARLAPRTKVLRDGRWQEKDAAILVPGDIISIKLGDIIPADARLLEGDP 181
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LK+DQ SALTGESLPVTKKT DEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST+
Sbjct: 182 LKVDQ--SALTGESLPVTKKTGDEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTQ 239
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
V GHFQ+VL SIGNFCICSIA+GMILEIIVMFP+Q+RSYR GINNLLVLLIGGIPIAMPT
Sbjct: 240 VTGHFQKVLASIGNFCICSIAMGMILEIIVMFPVQNRSYRTGINNLLVLLIGGIPIAMPT 299
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLT+DRNLIEVF +
Sbjct: 300 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTIDRNLIEVFQK 359
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+MDKDM+VLLAARA+RLENQDAIDAA+INMLADPKEARANI+EVHFLPFNPVDKRTAITY
Sbjct: 360 DMDKDMVVLLAARASRLENQDAIDAAVINMLADPKEARANIREVHFLPFNPVDKRTAITY 419
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDSDG WYRASKGAPEQIL LC+EK++IA KVHTIIDKFAERGLRSLAV+ QE+ E +KE
Sbjct: 420 IDSDGKWYRASKGAPEQILTLCQEKQQIAAKVHTIIDKFAERGLRSLAVSFQEIPENSKE 479
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPGGPW FCGLLPLFDPPRHDS +TIRRALNLGVCVKMITGDQLAIAKETGRRLGM TNM
Sbjct: 480 SPGGPWQFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNM 539
Query: 482 YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
YPS SL GRDKDE EALPVDELIE+ADGFAGVFPEHKYEIVKILQ +HVVGMTGDGVND
Sbjct: 540 YPSCSLFGRDKDETEALPVDELIEKADGFAGVFPEHKYEIVKILQMNEHVVGMTGDGVND 599
Query: 542 APALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKKADIGIAVADATDAAR AAD+VLTEPGLSVI+SAVLTSRAIFQRMKNYT
Sbjct: 600 APALKKADIGIAVADATDAARSAADLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSI 659
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF+LLALIW+YDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT
Sbjct: 660 TIRIVLGFMLLALIWKYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 719
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVT 710
G+V+GTYLALVTVLFYW+ T FFE HFHVKSLS +SEE+SSA+YLQVSIISQALIFVT
Sbjct: 720 GVVLGTYLALVTVLFYWLADSTQFFEAHFHVKSLSGSSEEMSSAVYLQVSIISQALIFVT 779
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RSQSWSF ERPGALLM AFVVAQLVATLIAVYAHISFA + G+GWGWAGVIWLYS +FYI
Sbjct: 780 RSQSWSFTERPGALLMFAFVVAQLVATLIAVYAHISFASVRGIGWGWAGVIWLYSLIFYI 839
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLD+IKF V YAL+GEAWNL+FD+KTAFTSKKDYG+EDR AQW+LS RSLQ +I EF
Sbjct: 840 PLDIIKFAVCYALTGEAWNLLFDKKTAFTSKKDYGREDREAQWVLSQRSLQRVISP--EF 897
Query: 831 NGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
R RPS+IAEQA+RRAEI RL E++TLRGH+ESV RLKNLDLN IQ AHTV
Sbjct: 898 EPRSRRPSMIAEQAKRRAEITRLRELYTLRGHIESVARLKNLDLNKIQTAHTV 950
|
Source: Petunia x hybrida Species: Petunia x hybrida Genus: Petunia Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|5669167|gb|AAD46188.1| plasma membrane proton ATPase [Nicotiana plumbaginifolia] | Back alignment and taxonomy information |
|---|
Score = 1552 bits (4019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 761/893 (85%), Positives = 823/893 (92%), Gaps = 15/893 (1%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+ENKFLKFL FMWNP SWVMEAAA+MAI LANGGGQGPDWQDFVGIVCLLLINSTISFIE
Sbjct: 62 RENKFLKFLRFMWNPCSWVMEAAAIMAIGLANGGGQGPDWQDFVGIVCLLLINSTISFIE 121
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAP+TKVLR+G+W+E+DAA+LVPGDIISIKLGDIIPADARLLEGDP
Sbjct: 122 ENNAGNAAAALMARLAPRTKVLRDGRWQEKDAAILVPGDIISIKLGDIIPADARLLEGDP 181
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LK+DQ SALTGESLP+TKKT DEVFSGSTCKHGEIEAVVIATGV+SFFGKAAHLVDSTE
Sbjct: 182 LKVDQ--SALTGESLPITKKTGDEVFSGSTCKHGEIEAVVIATGVNSFFGKAAHLVDSTE 239
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
GHFQ+VL SIGNFCICSIAVGMI EII+M+ +Q RSYR GINNLLVLLIGGIPIAMPT
Sbjct: 240 ASGHFQKVLASIGNFCICSIAVGMIFEIIIMYAVQRRSYRTGINNLLVLLIGGIPIAMPT 299
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVF R
Sbjct: 300 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFQR 359
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+MDKDM+VLLAARA+RLENQDAIDAAIIN+LADPKEARANI++VHFLPFNPVDKRTAITY
Sbjct: 360 DMDKDMVVLLAARASRLENQDAIDAAIINVLADPKEARANIRQVHFLPFNPVDKRTAITY 419
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDSDG WYRASKGAPEQIL+LC+EK++I+ KVHTIID+FAERGLRSLAVA QE+ E +KE
Sbjct: 420 IDSDGKWYRASKGAPEQILDLCQEKQQISAKVHTIIDRFAERGLRSLAVAFQEIPENSKE 479
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPGGPW FCGLLPLFDPPRHDS +TIRRALNLGVCVKMITGDQLAIAKETGRRLGM TNM
Sbjct: 480 SPGGPWAFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNM 539
Query: 482 YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
YPS S GRDKDENEALPVDELIE+ADGFAGVFPEHKYEIVKILQ H+VGMTGDGVND
Sbjct: 540 YPSFSFFGRDKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQANGHIVGMTGDGVND 599
Query: 542 APALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKKADIGIAVADATDAAR A+D+VLTEPGLSVI+SAVLTSRAIFQRMKNYT
Sbjct: 600 APALKKADIGIAVADATDAARSASDLVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSI 659
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF+LLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLNEIFAT
Sbjct: 660 TIRIVLGFMLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPGPDSWKLNEIFAT 719
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVT 710
GIVIGTYLALV+VLFYW+ T FFETHFHVKS+S N+EE+S+A+YLQVSIISQALIFVT
Sbjct: 720 GIVIGTYLALVSVLFYWLADSTLFFETHFHVKSISGNTEEISAAIYLQVSIISQALIFVT 779
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RSQSWSF+ERPG LLM AFVVAQLVATLIAVYAHI FA ISG+GWGWAGVIWLYS +FYI
Sbjct: 780 RSQSWSFIERPGLLLMFAFVVAQLVATLIAVYAHIEFASISGIGWGWAGVIWLYSLIFYI 839
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLD+IKFIVRY L+G+AWNL+FD+KTAFTSKKDYG+EDR +W+LS R+LQG+I EF
Sbjct: 840 PLDIIKFIVRYGLTGDAWNLLFDKKTAFTSKKDYGREDRETKWVLSVRTLQGVISP--EF 897
Query: 831 NGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
+ RPS+IAEQA+RRAEI RL E++TLRGH+ESV RLKNLD N IQ AHTV
Sbjct: 898 ETKSRRPSMIAEQAKRRAEITRLRELYTLRGHIESVARLKNLDFNKIQTAHTV 950
|
Source: Nicotiana plumbaginifolia Species: Nicotiana plumbaginifolia Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147853720|emb|CAN80223.1| hypothetical protein VITISV_027896 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1551 bits (4015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 770/878 (87%), Positives = 817/878 (93%), Gaps = 24/878 (2%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG+GPDWQDFVGI+CLL+INSTISFIEE
Sbjct: 63 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGEGPDWQDFVGILCLLIINSTISFIEE 122
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
NNAGNAAAALMA LAPKTKVLR+G W+EQDAA+LVPGDIISIKLGDIIPADARLLEGDPL
Sbjct: 123 NNAGNAAAALMARLAPKTKVLRDGHWQEQDAAILVPGDIISIKLGDIIPADARLLEGDPL 182
Query: 123 KIDQAS----------SALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGK 172
KIDQA+ SALTGESLPVTK+T DEVFSGSTCKHGEIEAVVIATGVHSFFGK
Sbjct: 183 KIDQANIFDKLNCFSLSALTGESLPVTKRTGDEVFSGSTCKHGEIEAVVIATGVHSFFGK 242
Query: 173 AAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLI 232
AAHLVDSTEV+GHFQ+VLTSIGNFCICSIAVGMILEIIVMFPIQHRSYR+GINNLLVLLI
Sbjct: 243 AAHLVDSTEVIGHFQKVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRNGINNLLVLLI 302
Query: 233 GGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVD 292
GGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVD
Sbjct: 303 GGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVD 362
Query: 293 RNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNP 352
RNLIEVF ++MDKD +VLLAARA+RLENQDAID AIINMLADPKEARANI EVHFLPFNP
Sbjct: 363 RNLIEVFAKDMDKDTVVLLAARASRLENQDAIDTAIINMLADPKEARANITEVHFLPFNP 422
Query: 353 VDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAI 412
VDKRTAITYIDS+GNW RASKGAPEQILNLC+EK+EIA KVH IIDKFAERGLRSL VA
Sbjct: 423 VDKRTAITYIDSNGNWIRASKGAPEQILNLCQEKEEIAGKVHAIIDKFAERGLRSLGVAY 482
Query: 413 QEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG 472
QEV E TKESPGGPWTFCGLLPLFDPPRHDS +TIRRALNLGVCVKMITGDQLAIAKETG
Sbjct: 483 QEVPEQTKESPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETG 542
Query: 473 RRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVV 532
RRLGM TNMYPSSSLLGR+KDE+E LPVDELIE+ADGFAGVFPEHKYEIV+ILQEKKHV
Sbjct: 543 RRLGMGTNMYPSSSLLGREKDESEVLPVDELIEKADGFAGVFPEHKYEIVRILQEKKHVC 602
Query: 533 GMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMK 592
GMTGDGVNDAPALKKADIGIAVADATDAAR AADIVLTEPGLSVIISAVLTSRAIFQRMK
Sbjct: 603 GMTGDGVNDAPALKKADIGIAVADATDAARSAADIVLTEPGLSVIISAVLTSRAIFQRMK 662
Query: 593 NYT-----------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDS 641
NYT LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSP+PDS
Sbjct: 663 NYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPKPDS 722
Query: 642 WKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSI 701
WKLNEIFATG+VIGTYLALVTVLFYWV+ T FF+THFHV +L S +EE+SSA+YLQVSI
Sbjct: 723 WKLNEIFATGVVIGTYLALVTVLFYWVIDSTTFFQTHFHVSTLKS-TEEISSAIYLQVSI 781
Query: 702 ISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVI 761
ISQALIFVTRSQSWSF+ERPGALLMCAFVVAQLVATLIAVYA ISFA ISG+GWGWAGVI
Sbjct: 782 ISQALIFVTRSQSWSFMERPGALLMCAFVVAQLVATLIAVYAEISFASISGIGWGWAGVI 841
Query: 762 WLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQ 821
W+YS +FY+PLD+IKF VRYALSGEAWNL+FDRKTAFTSKKDYGKEDR A+W+LS R++Q
Sbjct: 842 WIYSVIFYVPLDIIKFTVRYALSGEAWNLLFDRKTAFTSKKDYGKEDREAKWVLSQRTIQ 901
Query: 822 GLIGTDLEFNGRKSRPSLIAEQARRRAEIARLGEIHTL 859
GL+ ++LE NGR+S SLIAEQARRRAEIAR E +
Sbjct: 902 GLMSSELEINGRRS--SLIAEQARRRAEIARYMEFRSF 937
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356506116|ref|XP_003521833.1| PREDICTED: ATPase 10, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1521 bits (3938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 760/893 (85%), Positives = 824/893 (92%), Gaps = 31/893 (3%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+ENK LKFLSFMWNPLSWVMEAAA+MAI+LANGGG+GPDWQDF+GI+CLL+INSTISFIE
Sbjct: 62 KENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFIGIICLLVINSTISFIE 121
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPKTKVLR+GQW+EQDAA+LVPGDIISIKLGDIIPADARLLEGDP
Sbjct: 122 ENNAGNAAAALMARLAPKTKVLRDGQWQEQDAAILVPGDIISIKLGDIIPADARLLEGDP 181
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ SALTGESLPVTK+T +EVFSGSTCKHGEIEAVVIATGVHSFFGKAA+LVDSTE
Sbjct: 182 LKIDQ--SALTGESLPVTKRTGNEVFSGSTCKHGEIEAVVIATGVHSFFGKAAYLVDSTE 239
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
VVGHFQ+VLTSIGNFCICSIA+GMI EII+MFP++HRSYRDGINNLLVLLIGGIPIAMPT
Sbjct: 240 VVGHFQKVLTSIGNFCICSIAIGMIFEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPT 299
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR
Sbjct: 300 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 359
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
NMDKD +VLLAARAARLENQDAID A++NMLADPKEARANI EVHFLPFNPVDKRTAITY
Sbjct: 360 NMDKDTVVLLAARAARLENQDAIDTAVVNMLADPKEARANITEVHFLPFNPVDKRTAITY 419
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID DGN++RASKGAPEQIL+LC+EK +IA KVHTIIDKFAERGLRSLAVA QE+ E +K+
Sbjct: 420 IDFDGNFHRASKGAPEQILDLCQEKDQIAKKVHTIIDKFAERGLRSLAVAYQEIPEKSKD 479
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPGGPWTFCGLLPLFDPPRHDS +TIRRALNLGVCVKMITGDQLAIAKETGRRLGM TNM
Sbjct: 480 SPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNM 539
Query: 482 YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
YPSSSLLGR+K+E+EALP+DEL+E ADGFAGV+PEHKYEIVKILQEK+HVVGMTGDGVND
Sbjct: 540 YPSSSLLGREKEEHEALPIDELVEMADGFAGVYPEHKYEIVKILQEKQHVVGMTGDGVND 599
Query: 542 APALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKKADIGIAV+DATDAAR AAD+VLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 600 APALKKADIGIAVSDATDAARSAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 659
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF LLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFAT
Sbjct: 660 TIRIVLGFALLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFAT 719
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVT 710
GIVIGTYLALVTVLFYW +V+T FFE+HFHV S+SS+SE+VSSA+YLQVSIISQALIFVT
Sbjct: 720 GIVIGTYLALVTVLFYWAIVETTFFESHFHVSSISSDSEKVSSAVYLQVSIISQALIFVT 779
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RS+ WSFLERPG LLMCAFV+AQLVAT+IAVYA+ISF I G+GW WAGVIWLYS +FY+
Sbjct: 780 RSRGWSFLERPGVLLMCAFVIAQLVATIIAVYAYISFGKIRGIGWRWAGVIWLYSIIFYV 839
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLD+IKF VRY LSGEAW L+F+RKTAFT KKDYGKE+RAA+ E
Sbjct: 840 PLDIIKFTVRYGLSGEAWKLIFERKTAFTYKKDYGKEERAAK----------------EE 883
Query: 831 NGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
NGR S SLIAE+ARRRAEIARLGEIH+LRGHV+SV+RLKN D N+IQ+AHTV
Sbjct: 884 NGRGS--SLIAEKARRRAEIARLGEIHSLRGHVQSVLRLKNFDQNLIQSAHTV 934
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42562116|ref|NP_173169.2| H+-transporting ATPase [Arabidopsis thaliana] gi|12585313|sp|Q43128.2|PMA10_ARATH RecName: Full=ATPase 10, plasma membrane-type; AltName: Full=Proton pump 10 gi|13162530|gb|AAD50009.3|AC007651_4 H+-transporting ATPase AHA10 [Arabidopsis thaliana] gi|13096793|gb|AAB32310.2| plasma membrane H(+)-ATPase isoform AHA10 [Arabidopsis thaliana] gi|332191444|gb|AEE29565.1| H+-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1432 bits (3706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/893 (80%), Positives = 791/893 (88%), Gaps = 18/893 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
QEN+F+KFL FMWNPLSWVMEAAA+MAI LAN GPDW+DF GIVCLLLIN+TISF E
Sbjct: 62 QENRFVKFLGFMWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFE 121
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LA KT+VLR+GQW+EQDA++LVPGDIISIKLGDIIPADARLLEGDP
Sbjct: 122 ENNAGNAAAALMARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDP 181
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ S LTGESLPVTKK ++VFSGSTCK GEIEAVVIATG +FFGK A LVDST+
Sbjct: 182 LKIDQ--SVLTGESLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTD 239
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
V GHFQQVLTSIGNFCICSIAVGM+LEII+MFP+QHRSYR GINNLLVLLIGGIPIAMPT
Sbjct: 240 VTGHFQQVLTSIGNFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPT 299
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVD+NLIEVF
Sbjct: 300 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVD 359
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
MDKD I+LLA RA+RLENQDAIDAAI++MLADP+EARANI+E+HFLPFNPVDKRTAITY
Sbjct: 360 YMDKDTILLLAGRASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITY 419
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDSDG WYRA+KGAPEQ+LNLC++K EIA +V+ IID+FAE+GLRSLAVA QE+ E +
Sbjct: 420 IDSDGKWYRATKGAPEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNN 479
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPGGPW FCGLLPLFDPPRHDS +TI RAL+LGVCVKMITGDQLAIAKETGRRLGM TNM
Sbjct: 480 SPGGPWRFCGLLPLFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNM 539
Query: 482 YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
YPSSSLLG + DE+EA+PVDELIE ADGFAGVFPEHKYEIVKILQE KHVVGMTGDGVND
Sbjct: 540 YPSSSLLGHNNDEHEAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVND 599
Query: 542 APALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKKADIGIAVADATDAAR +ADIVLT+PGLSVIISAVLTSRAIFQRM+NYT
Sbjct: 600 APALKKADIGIAVADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSI 659
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF LLALIWEYDFPPFMVLIIAILNDGTIMTISKDRV+PSP P+SWKLN+IFAT
Sbjct: 660 TIRIVLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFAT 719
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVT 710
GIVIGTYLALVTVLFYW++V T FFE HFHVKS+++NSE+VSSA+YLQVSIISQALIFVT
Sbjct: 720 GIVIGTYLALVTVLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVT 779
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RS+ WSF ERPG LL+ AF++AQL ATLIAVYA+ISFA I+G+GW WAGVIWLYS +FYI
Sbjct: 780 RSRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYI 839
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLDVIKF+ YALSGEAWNLV DRKTAFT KKDYGK+D + +S RS E
Sbjct: 840 PLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRSRSA-----EEL 894
Query: 831 NGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
G +SR S IAEQ RRRAEIARL E+H++ H+ESV++LK +D +I+AAHTV
Sbjct: 895 RGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75214754|gb|ABA18104.1| putative plasma membrane ATPase [Capsella rubella] | Back alignment and taxonomy information |
|---|
Score = 1418 bits (3671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/893 (76%), Positives = 781/893 (87%), Gaps = 14/893 (1%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFL FMWNPLSWVME+AA+MAIVLANGGG+ PDWQDF+GI+ LL+INSTISFIEE
Sbjct: 58 ENKFLKFLGFMWNPLSWVMESAAIMAIVLANGGGKPPDWQDFIGIMVLLIINSTISFIEE 117
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
NNAGNAA+ALMA+LAPKTKVLR+G+W EQ+AA+LVPGD+ISIKLGDI+PADARLL+GDPL
Sbjct: 118 NNAGNAASALMANLAPKTKVLRDGKWGEQEAAILVPGDLISIKLGDIVPADARLLQGDPL 177
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 182
KIDQ SALTGESLPVTK DEVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 178 KIDQ--SALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNN 235
Query: 183 VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTV 242
VGHFQ+VLTSIGNFCICSI +GM++EI++M+PIQHR+YRDGI+NLLVLLIGGIPIAMPTV
Sbjct: 236 VGHFQKVLTSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTV 295
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302
LSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD++LIEVF RN
Sbjct: 296 LSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPRN 355
Query: 303 MDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYI 362
MD D +VL+AARA+R+ENQDAIDA+I+ ML DPKEARA I EVHFLPFNPVDKRTAITYI
Sbjct: 356 MDTDSVVLMAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYI 415
Query: 363 DSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKES 422
D +G+W+R+SKGAPEQI+ LC + E K H +ID FAERGLRSL VA Q V E TKES
Sbjct: 416 DENGDWHRSSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKES 475
Query: 423 PGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY 482
G PW F GLLPLFDPPRHDS +TIRRAL LGV VKMITGDQLAI ETGRRLGM TNMY
Sbjct: 476 DGSPWEFVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMY 535
Query: 483 PSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
PS+SLLG KD++ +P+DELIE+ADGFAGVFPEHKYEIVK LQE+KH+ GMTGDGVND
Sbjct: 536 PSTSLLGNSKDDSLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVND 595
Query: 542 APALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKKADIGIAVADATDAAR A+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 596 APALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 655
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF+L+ALIW +DF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLNEIFAT
Sbjct: 656 TIRIVLGFMLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFAT 715
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVT 710
G+V+GTY+AL TVLF+W+ DT+FF F V+S+ N EE+ +ALYLQVSIISQALIFVT
Sbjct: 716 GVVLGTYMALTTVLFFWLAHDTNFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVT 775
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RS+SWSF+ERPG LL+ AF++AQLVATLIAVYA+ FA I G GWGWAGVIW+YS + YI
Sbjct: 776 RSRSWSFVERPGFLLIIAFIIAQLVATLIAVYANWGFARIIGCGWGWAGVIWIYSIITYI 835
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLD++KFI+RYAL+G+AW+ + +KTAFT+KKDYGK +R AQW L+ R+L GL + F
Sbjct: 836 PLDILKFIIRYALTGKAWDNMIQQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEAMF 895
Query: 831 NGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
+ + S IAEQA+RRAE+ARL E+HTL+GHVESVV+LK LD++ IQ +TV
Sbjct: 896 HDKNHELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
Source: Capsella rubella Species: Capsella rubella Genus: Capsella Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446002|ref|XP_002267501.1| PREDICTED: plasma membrane ATPase 4 isoform 1 [Vitis vinifera] gi|297735422|emb|CBI17862.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1415 bits (3664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/898 (78%), Positives = 795/898 (88%), Gaps = 18/898 (2%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+KFLKFL FMWNPLSWVMEAAA+MAIVLANG GQ PDWQDFVGIVCLL+INSTISFIE
Sbjct: 59 KESKFLKFLGFMWNPLSWVMEAAALMAIVLANGDGQPPDWQDFVGIVCLLVINSTISFIE 118
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPKTKVLR+G+W EQDAA+LVPGDIISIKLGDIIPADARLLEGDP
Sbjct: 119 ENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDP 178
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LK+DQ SALTGESLPVTK +DEVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 179 LKVDQ--SALTGESLPVTKHPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 236
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
VGHFQ+VLT+IGNFCICSIAVGM++EIIVM+PIQHR YRDGI+NLLVLLIGGIPIAMPT
Sbjct: 237 QVGHFQKVLTAIGNFCICSIAVGMLVEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPT 296
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VDRNL+EVF +
Sbjct: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLVEVFAK 356
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+DK+ ++LLAARA+R ENQDAIDAAI+ MLADPKEARA I+EVHFLPFNPVDKRTA+TY
Sbjct: 357 GVDKEHVLLLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTY 416
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID+DG W+RASKGAPEQIL+LCK K+++ K H+IIDKFAERGLRSLAV QEV E +KE
Sbjct: 417 IDADGKWHRASKGAPEQILDLCKCKEDVKKKAHSIIDKFAERGLRSLAVGRQEVPEKSKE 476
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
S G PW F GLLPLFDPPRHDS +TIRRALNLGV VKMITGDQLAIAKETGRRLGM TNM
Sbjct: 477 SLGSPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM 536
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPS+SLLG+DKD + ALPV+ELIE+ADGFAGVFPEHKYEIVK LQE+KH+ GMTGDGVN
Sbjct: 537 YPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVN 596
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALKKADIGIAVADATDAARGA+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 597 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 656
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+ +ALIW++DF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFA
Sbjct: 657 ITIRIVFGFLFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLREIFA 716
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709
TG+V+G YLAL+TV+F+WV+ DTDFF F VKS+ + E+ +ALYLQVS++SQALIFV
Sbjct: 717 TGVVLGGYLALMTVIFFWVMKDTDFFPDKFGVKSIRDSPHEMMAALYLQVSVVSQALIFV 776
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWSF+ERPG LL+ AF++AQLVATLIAVYA+ FA I G+GWGWAGV+W+YS VFY
Sbjct: 777 TRSRSWSFVERPGLLLVTAFIIAQLVATLIAVYANWGFARIKGMGWGWAGVVWIYSVVFY 836
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLE 829
+PLD IKF +RY LSG+AW + + KTAFT+KKDYGKE+R AQW L+ R+L GL +
Sbjct: 837 VPLDFIKFFIRYILSGKAWLNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPETS 896
Query: 830 --FNGRKSRPSL--IAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
FN + S L IAEQA+RRAE+ARL E+HTL+GHVESVV+LK LD++ IQ +TV
Sbjct: 897 NLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 954
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | ||||||
| TAIR|locus:2020372 | 947 | AHA10 "autoinhibited H(+)-ATPa | 0.990 | 0.923 | 0.726 | 0.0 | |
| TAIR|locus:2096549 | 948 | HA8 "H(+)-ATPase 8" [Arabidops | 0.995 | 0.927 | 0.699 | 0.0 | |
| TAIR|locus:2053343 | 949 | HA6 "H(+)-ATPase 6" [Arabidops | 0.995 | 0.926 | 0.694 | 0.0 | |
| TAIR|locus:2046623 | 949 | HA5 "H(+)-ATPase 5" [Arabidops | 0.996 | 0.927 | 0.683 | 0.0 | |
| TAIR|locus:2044450 | 949 | HA1 "H(+)-ATPase 1" [Arabidops | 0.996 | 0.927 | 0.688 | 0.0 | |
| TAIR|locus:2025727 | 954 | HA9 "H(+)-ATPase 9" [Arabidops | 0.996 | 0.922 | 0.679 | 0.0 | |
| TAIR|locus:2097895 | 960 | HA4 "H(+)-ATPase 4" [Arabidops | 0.933 | 0.858 | 0.722 | 0.0 | |
| TAIR|locus:2172244 | 956 | HA11 "H(+)-ATPase 11" [Arabido | 0.933 | 0.861 | 0.720 | 0.0 | |
| TAIR|locus:2165600 | 949 | HA3 "H(+)-ATPase 3" [Arabidops | 0.992 | 0.923 | 0.676 | 0.0 | |
| TAIR|locus:2081932 | 961 | HA7 "H(+)-ATPase 7" [Arabidops | 0.870 | 0.800 | 0.629 | 1.8e-252 |
| TAIR|locus:2020372 AHA10 "autoinhibited H(+)-ATPase isoform 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3294 (1164.6 bits), Expect = 0., P = 0.
Identities = 649/893 (72%), Positives = 719/893 (80%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
QEN+F+KFL FMWNPLSWVMEAAA+MAI LAN GPDW+DF GIVCLLLIN+TISF E
Sbjct: 62 QENRFVKFLGFMWNPLSWVMEAAALMAIALANSQSLGPDWEDFTGIVCLLLINATISFFE 121
Query: 62 EXXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E KT+VLR+GQW+EQDA++LVPGDIISIKLGDIIPADARLLEGDP
Sbjct: 122 ENNAGNAAAALMARLALKTRVLRDGQWQEQDASILVPGDIISIKLGDIIPADARLLEGDP 181
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ S LTGESLPVTKK ++VFSGSTCK GEIEAVVIATG +FFGK A LVDST+
Sbjct: 182 LKIDQ--SVLTGESLPVTKKKGEQVFSGSTCKQGEIEAVVIATGSTTFFGKTARLVDSTD 239
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPT 241
V GHFQQVLTSIGNFCICSIAVGM+LEII+MFP+QHRSYR AMPT
Sbjct: 240 VTGHFQQVLTSIGNFCICSIAVGMVLEIIIMFPVQHRSYRIGINNLLVLLIGGIPIAMPT 299
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC DKTGTLTLN LTVD+NLIEVF
Sbjct: 300 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNSLTVDKNLIEVFVD 359
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
MDKD I+LLA RA+RLENQDAIDAAI++MLADP+EARANI+E+HFLPFNPVDKRTAITY
Sbjct: 360 YMDKDTILLLAGRASRLENQDAIDAAIVSMLADPREARANIREIHFLPFNPVDKRTAITY 419
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDSDG WYRA+KGAPEQ+LNLC++K EIA +V+ IID+FAE+GLRSLAVA QE+ E +
Sbjct: 420 IDSDGKWYRATKGAPEQVLNLCQQKNEIAQRVYAIIDRFAEKGLRSLAVAYQEIPEKSNN 479
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPGGPW FCGLLPLFDPPRHDS +TI RAL+LGVCVKMITGDQLAIAKETGRRLGM TNM
Sbjct: 480 SPGGPWRFCGLLPLFDPPRHDSGETILRALSLGVCVKMITGDQLAIAKETGRRLGMGTNM 539
Query: 482 YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
YPSSSLLG + DE+EA+PVDELIE ADGFAGVFPEHKYEIVKILQE KHVVGMTGDGVND
Sbjct: 540 YPSSSLLGHNNDEHEAIPVDELIEMADGFAGVFPEHKYEIVKILQEMKHVVGMTGDGVND 599
Query: 542 APALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKK LT+PGLSVIISAVLTSRAIFQRM+NYT
Sbjct: 600 APALKKADIGIAVADATDAARSSADIVLTDPGLSVIISAVLTSRAIFQRMRNYTVYAVSI 659
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF LLALIWEYDFPPFMVLIIAILNDGTIMTISKDRV+PSP P+SWKLN+IFAT
Sbjct: 660 TIRIVLGFTLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVRPSPTPESWKLNQIFAT 719
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVT 710
GIVIGTYLALVTVLFYW++V T FFE HFHVK A+YLQVSIISQALIFVT
Sbjct: 720 GIVIGTYLALVTVLFYWIIVSTTFFEKHFHVKSIANNSEQVSSAMYLQVSIISQALIFVT 779
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RS+ WSF ERPG LL+ AF++AQL ATLIAVYA+ISFA I+G+GW WAGVIWLYS +FYI
Sbjct: 780 RSRGWSFFERPGTLLIFAFILAQLAATLIAVYANISFAKITGIGWRWAGVIWLYSLIFYI 839
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLDVIKF+ YALSGEAWNLV DRKTAFT KKDYGK+D + +S RS E
Sbjct: 840 PLDVIKFVFHYALSGEAWNLVLDRKTAFTYKKDYGKDDGSPNVTISQRSRSAE-----EL 894
Query: 831 NGRKSRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
G +SR S L E+H++ H+ESV++LK +D +I+AAHTV
Sbjct: 895 RGSRSRASWIAEQTRRRAEIARLLEVHSVSRHLESVIKLKQIDQRMIRAAHTV 947
|
|
| TAIR|locus:2096549 HA8 "H(+)-ATPase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3185 (1126.2 bits), Expect = 0., P = 0.
Identities = 625/893 (69%), Positives = 710/893 (79%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFL FMWNPLSWVME+AA+MAIVLANGGG+ PDWQDF+GI+ LL+INSTISFIEE
Sbjct: 58 ENKFLKFLGFMWNPLSWVMESAAIMAIVLANGGGKAPDWQDFIGIMVLLIINSTISFIEE 117
Query: 63 XXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
PKTKVLR+G+W EQ+A++LVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NNAGNAAAALMANLAPKTKVLRDGKWGEQEASILVPGDLISIKLGDIVPADARLLEGDPL 177
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 182
KIDQ SALTGESLP TK DEVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 178 KIDQ--SALTGESLPTTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNN 235
Query: 183 VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPTV 242
VGHFQ+VLTSIGNFCICSI +GM++EI++M+PIQHR+YRD AMPTV
Sbjct: 236 VGHFQKVLTSIGNFCICSIGLGMLIEILIMYPIQHRTYRDGIDNLLVLLIGGIPIAMPTV 295
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302
LSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD++LIEVF +N
Sbjct: 296 LSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKSLIEVFPKN 355
Query: 303 MDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYI 362
MD D +VL+AARA+R+ENQDAIDA+I+ ML DPKEARA I EVHFLPFNPVDKRTAITYI
Sbjct: 356 MDSDSVVLMAARASRIENQDAIDASIVGMLGDPKEARAGITEVHFLPFNPVDKRTAITYI 415
Query: 363 DSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKES 422
D G+W+R+SKGAPEQI+ LC + E K H +ID FAERGLRSL VA Q V E TKES
Sbjct: 416 DESGDWHRSSKGAPEQIIELCNLQGETKRKAHEVIDGFAERGLRSLGVAQQTVPEKTKES 475
Query: 423 PGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY 482
G PW F GLLPLFDPPRHDS +TIRRAL LGV VKMITGDQLAI ETGRRLGM TNMY
Sbjct: 476 DGSPWEFVGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGIETGRRLGMGTNMY 535
Query: 483 PSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541
PS+SLLG KDE+ +P+DELIE+ADGFAGVFPEHKYEIVK LQE+KH+ GMTGDGVND
Sbjct: 536 PSTSLLGNSKDESLVGIPIDELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVND 595
Query: 542 APALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYT------ 595
APALKK LTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 596 APALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSI 655
Query: 596 -----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFAT 650
LGF+L+ALIW +DF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKLNEIFAT
Sbjct: 656 TIRIVLGFMLVALIWRFDFAPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLNEIFAT 715
Query: 651 GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVT 710
G+V+GTY+AL TVLF+W+ DTDFF F V+ ALYLQVSIISQALIFVT
Sbjct: 716 GVVLGTYMALTTVLFFWLAHDTDFFSKTFGVRSIQGNEEELMAALYLQVSIISQALIFVT 775
Query: 711 RSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYI 770
RS+SWSF+ERPG LL+ AFV+AQLVATLIAVYA+ FA I G GWGWAG IW+YS + YI
Sbjct: 776 RSRSWSFVERPGFLLLIAFVIAQLVATLIAVYANWGFARIVGCGWGWAGGIWVYSIITYI 835
Query: 771 PLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEF 830
PLD++KFI+RYAL+G+AW+ + ++KTAFT+KKDYGK +R AQW L+ R+L GL + F
Sbjct: 836 PLDILKFIIRYALTGKAWDNMINQKTAFTTKKDYGKGEREAQWALAQRTLHGLPPPEAMF 895
Query: 831 NGRKSRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
N K+ S L E+HTL+GHVESVV+LK LD++ IQ +TV
Sbjct: 896 NDNKNELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 948
|
|
| TAIR|locus:2053343 HA6 "H(+)-ATPase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3163 (1118.5 bits), Expect = 0., P = 0.
Identities = 621/894 (69%), Positives = 701/894 (78%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
ENKFLKFL FMWNPLSWVMEAAA+MAIVLANGGG+ PDWQDFVGI CLL+INSTISFIEE
Sbjct: 58 ENKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGRPPDWQDFVGITCLLIINSTISFIEE 117
Query: 63 XXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
PKTKVLR+G+W EQ+AA+LVPGD+ISIKLGDI+PADARLLEGDPL
Sbjct: 118 NNAGNAAAALMANLAPKTKVLRDGRWGEQEAAILVPGDLISIKLGDIVPADARLLEGDPL 177
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV 182
KIDQ SALTGESLP TK DEVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 178 KIDQ--SALTGESLPATKHQGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNN 235
Query: 183 VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPTV 242
VGHFQ+VLT+IGNFCICSI +GM++EII+M+PIQHR YRD AMPTV
Sbjct: 236 VGHFQKVLTAIGNFCICSIGIGMLIEIIIMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTV 295
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302
LSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+LTVD+NLIEVF+++
Sbjct: 296 LSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSKD 355
Query: 303 MDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYI 362
+DKD ++LL+ARA+R+ENQDAID +I+NML DPKEARA I EVHFLPFNPV+KRTAITYI
Sbjct: 356 VDKDYVILLSARASRVENQDAIDTSIVNMLGDPKEARAGITEVHFLPFNPVEKRTAITYI 415
Query: 363 DSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKES 422
D++G W+R SKGAPEQI+ LC K E + H IIDKFAERGLRSL VA Q V E KES
Sbjct: 416 DTNGEWHRCSKGAPEQIIELCDLKGETKRRAHEIIDKFAERGLRSLGVARQRVPEKDKES 475
Query: 423 PGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY 482
G PW F GLLPLFDPPRHDS +TIRRAL+LGV VKMITGDQLAI KETGRRLGM TNMY
Sbjct: 476 AGTPWEFVGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNMY 535
Query: 483 PSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDA 542
PSSSLL D +PVDELIE+ADGFAGVFPEHKYEIV+ LQE+KH+VGMTGDGVNDA
Sbjct: 536 PSSSLLENKDDTTGGVPVDELIEKADGFAGVFPEHKYEIVRKLQERKHIVGMTGDGVNDA 595
Query: 543 PALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYT------- 595
PALKK LTEPGLSVI+SAVLTSRAIFQRMKNYT
Sbjct: 596 PALKKADIGIAVDDATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIT 655
Query: 596 ----LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFATG 651
LGF+L+ALIWE+DF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFATG
Sbjct: 656 IRIVLGFMLVALIWEFDFSPFMVLIIAILNDGTIMTISKDRVKPSPIPDSWKLKEIFATG 715
Query: 652 IVIGTYLALVTVLFYWVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFVTR 711
+V+GTY+ALVTV+F+W+ DT FF F V+ LYLQVSIISQALIFVTR
Sbjct: 716 VVLGTYMALVTVVFFWLAHDTTFFSDKFGVRSLQGKDEELIAVLYLQVSIISQALIFVTR 775
Query: 712 SQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIP 771
S+SWSF+ERPG LL+ AF VAQL+ATLIA YAH FA I G GWGW GVIW+YS V YIP
Sbjct: 776 SRSWSFVERPGLLLLIAFFVAQLIATLIATYAHWEFARIKGCGWGWCGVIWIYSIVTYIP 835
Query: 772 LDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFN 831
LD++KFI RY LSG+AWN + + +TAFT+KKDYG+ +R AQW L+ R+L GL + F
Sbjct: 836 LDILKFITRYTLSGKAWNNMIENRTAFTTKKDYGRGEREAQWALAQRTLHGLKPPESMFE 895
Query: 832 GRKSRPSLXXXXXXXXXXX--XXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
+ L L E+HTL+GHVESVV+LK LD++ + +TV
Sbjct: 896 DTATYTELSEIAEQAKKRAEVARLREVHTLKGHVESVVKLKGLDIDNLNQHYTV 949
|
|
| TAIR|locus:2046623 HA5 "H(+)-ATPase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3122 (1104.1 bits), Expect = 0., P = 0.
Identities = 614/898 (68%), Positives = 711/898 (79%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+K LKFL FMWNPLSWVME AA+MAI LANGGG+ PDWQDFVGIVCLLLINSTISFIE
Sbjct: 54 KESKLLKFLGFMWNPLSWVMEVAALMAIALANGGGRPPDWQDFVGIVCLLLINSTISFIE 113
Query: 62 EXXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E PKTKVLR+ QW EQ+A++LVPGD+ISIKLGDIIPADARLL+GDP
Sbjct: 114 ENNAGNAAAALMAGLAPKTKVLRDNQWSEQEASILVPGDVISIKLGDIIPADARLLDGDP 173
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ+S LTGES+PVTK +DEVFSGS CK GEIEA+VIATGVH+FFGKAAHLVD+T
Sbjct: 174 LKIDQSS--LTGESIPVTKNPSDEVFSGSICKQGEIEAIVIATGVHTFFGKAAHLVDNTN 231
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPT 241
+GHFQ+VLTSIGNFCICSIA+G+I+E++VM+PIQ R YRD AMP+
Sbjct: 232 QIGHFQKVLTSIGNFCICSIALGIIVELLVMYPIQRRRYRDGIDNLLVLLIGGIPIAMPS 291
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+A GSHRL QQGAITKRMTAIEEMAGMDVLC DKTGTLTLN+LTVD+NL+EVF +
Sbjct: 292 VLSVTMATGSHRLFQQGAITKRMTAIEEMAGMDVLCCDKTGTLTLNKLTVDKNLVEVFAK 351
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+ K+ + LLAARA+R+ENQDAIDAAI+ MLADPKEARA ++EVHF PFNPVDKRTA+TY
Sbjct: 352 GVGKEHVFLLAARASRIENQDAIDAAIVGMLADPKEARAGVREVHFFPFNPVDKRTALTY 411
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
+DSDGNW+RASKGAPEQILNLC K+++ KVH +IDKFAERGLRSLAVA QEV E K+
Sbjct: 412 VDSDGNWHRASKGAPEQILNLCNCKEDVRRKVHGVIDKFAERGLRSLAVARQEVLEKKKD 471
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
+PGGPW GLLPLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 472 APGGPWQLVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 531
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG+ KD + ALPVDELIE+ADGFAGVFPEHKYEIV LQ++ H+ GMTGDGVN
Sbjct: 532 YPSSALLGQVKDSSLGALPVDELIEKADGFAGVFPEHKYEIVHRLQQRNHICGMTGDGVN 591
Query: 541 DAPALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALKK LTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 592 DAPALKKADIGIAVVDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 651
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+ +ALIW++DF PFMVLIIAILNDGTIMTISKDR+KPSP+PDSWKL +IF+
Sbjct: 652 ITIRIVFGFMFIALIWQFDFSPFMVLIIAILNDGTIMTISKDRMKPSPQPDSWKLRDIFS 711
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFV 709
TG+V+G Y AL+TV+F+WV+ D+DFF +F V+ ALYLQVSIISQALIFV
Sbjct: 712 TGVVLGGYQALMTVVFFWVMKDSDFFSNYFGVRPLSQRPEQMMAALYLQVSIISQALIFV 771
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWS+ E PG LL+ AFV+AQLVAT IAVYA+ SFA I G GWGWAGVIWLYSF+ Y
Sbjct: 772 TRSRSWSYAECPGLLLLGAFVIAQLVATFIAVYANWSFARIEGAGWGWAGVIWLYSFLTY 831
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLE 829
IPLD++KF +RY LSG+AW + + KTAFT+KKDYGKE+R AQW + R+L GL +
Sbjct: 832 IPLDLLKFGIRYVLSGKAWLNLLENKTAFTTKKDYGKEEREAQWAAAQRTLHGLQPAEKN 891
Query: 830 --FNGRKSRPSLXXXXXXXXXXXXX--LGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
FN + S L L EI+TL+GHVESVV+LK LD++ IQ +TV
Sbjct: 892 NIFNEKNSYSELSQIAEQAKRRAEVVRLREINTLKGHVESVVKLKGLDIDTIQQHYTV 949
|
|
| TAIR|locus:2044450 HA1 "H(+)-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3121 (1103.7 bits), Expect = 0., P = 0.
Identities = 618/898 (68%), Positives = 704/898 (78%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+K LKFL FMWNPLSWVMEAAA+MAI LANG + PDWQDFVGI+CLL+INSTISFIE
Sbjct: 54 KESKILKFLGFMWNPLSWVMEAAALMAIALANGDNRPPDWQDFVGIICLLVINSTISFIE 113
Query: 62 EXXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E PKTKVLR+G+W EQ+AA+LVPGDI+SIKLGDIIPADARLLEGDP
Sbjct: 114 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP 173
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LK+DQ SALTGESLPVTK EVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 174 LKVDQ--SALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 231
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPT 241
VGHFQ+VLTSIGNFCICSIA+G+ +EI+VM+PIQHR YRD AMPT
Sbjct: 232 QVGHFQKVLTSIGNFCICSIAIGIAIEIVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPT 291
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD+NL+EVF +
Sbjct: 292 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCK 351
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
++KD ++L AA A+R+ENQDAIDAA++ MLADPKEARA I+EVHFLPFNPVDKRTA+TY
Sbjct: 352 GVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTY 411
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDSDGNW+R SKGAPEQIL+L + ++ KV + IDK+AERGLRSLAVA Q V E TKE
Sbjct: 412 IDSDGNWHRVSKGAPEQILDLANARPDLRKKVLSCIDKYAERGLRSLAVARQVVPEKTKE 471
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPGGPW F GLLPLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 472 SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 531
Query: 482 YPSSSLLGRDKDENEA-LPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPS++LLG DKD N A +PV+ELIE+ADGFAGVFPEHKYEIVK LQE+KH+VGMTGDGVN
Sbjct: 532 YPSAALLGTDKDSNIASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVN 591
Query: 541 DAPALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALKK LTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 592 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 651
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+L+ALIWE+DF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFA
Sbjct: 652 ITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFA 711
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFV 709
TGIV+G Y A+++V+F+W TDFF F V+ A+YLQVSIISQALIFV
Sbjct: 712 TGIVLGGYQAIMSVIFFWAAHKTDFFSDKFGVRSIRDNNDELMGAVYLQVSIISQALIFV 771
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWSF+ERPGALLM AFV+AQLVATLIAVYA +FA + G+GWGWAGVIW+YS V Y
Sbjct: 772 TRSRSWSFVERPGALLMIAFVIAQLVATLIAVYADWTFAKVKGIGWGWAGVIWIYSIVTY 831
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGT-DL 828
P D++KF +RY LSG+AW +FD +TAFT+KKDYG +R AQW + R+L GL D+
Sbjct: 832 FPQDILKFAIRYILSGKAWASLFDNRTAFTTKKDYGIGEREAQWAQAQRTLHGLQPKEDV 891
Query: 829 EF---NGRKSRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
G S L E+HTL+GHVESV +LK LD++ +TV
Sbjct: 892 NIFPEKGSYRELSEIAEQAKRRAEIARLRELHTLKGHVESVAKLKGLDIDTAGHHYTV 949
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| TAIR|locus:2025727 HA9 "H(+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3112 (1100.5 bits), Expect = 0., P = 0.
Identities = 610/898 (67%), Positives = 705/898 (78%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+ENK LKFL FMWNPLSWVME AA+MAI LANGGG+ PDWQDFVGI LL+INSTISFIE
Sbjct: 59 KENKVLKFLGFMWNPLSWVMELAAIMAIALANGGGRPPDWQDFVGITVLLIINSTISFIE 118
Query: 62 EXXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E PKTKVLR+G+W EQ+AA+LVPGDIISIKLGDI+PAD RLL+GDP
Sbjct: 119 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIVPADGRLLDGDP 178
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ SALTGESLPVTK EV+SGSTCK GE+EAVVIATGVH+FFGKAAHLVDST
Sbjct: 179 LKIDQ--SALTGESLPVTKHPGQEVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDSTN 236
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPT 241
GHFQ+VLT+IGNFCICSIA+GM++EI+VM+PIQ R+YRD AMPT
Sbjct: 237 QEGHFQKVLTAIGNFCICSIAIGMLIEIVVMYPIQKRAYRDGIDNLLVLLIGGIPIAMPT 296
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+LTVD++++EVF +
Sbjct: 297 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMVEVFVK 356
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
++DKD +++ AARA+R+ENQDAIDA I+ ML DP+EAR I EVHF PFNPVDKRTAITY
Sbjct: 357 DLDKDQLLVNAARASRVENQDAIDACIVGMLGDPREAREGITEVHFFPFNPVDKRTAITY 416
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID++GNW+R SKGAPEQI+ LC +++ + + H IIDKFA+RGLRSLAV Q VSE K
Sbjct: 417 IDANGNWHRVSKGAPEQIIELCNLREDASKRAHDIIDKFADRGLRSLAVGRQTVSEKDKN 476
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPG PW F GLLPLFDPPRHDS +TIRRAL+LGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 477 SPGEPWQFLGLLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIGKETGRRLGMGTNM 536
Query: 482 YPSSSLLGRDKDENEA-LPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG+DKDE+ A LPVDELIE+ADGFAGVFPEHKYEIVK LQE KH+ GMTGDGVN
Sbjct: 537 YPSSALLGQDKDESIASLPVDELIEKADGFAGVFPEHKYEIVKRLQEMKHICGMTGDGVN 596
Query: 541 DAPALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALK+ LTEPGLSVI+SAVLTSRAIFQRMKNYT+
Sbjct: 597 DAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVS 656
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+LLALIW++DF PFMVLI+AILNDGTIMTISKDRVKPSP PDSWKL EIFA
Sbjct: 657 ITIRIVMGFMLLALIWKFDFSPFMVLIVAILNDGTIMTISKDRVKPSPLPDSWKLKEIFA 716
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFV 709
TG+V+GTYLA++TV+F+W TDFF F V+ A+YLQVSI+SQALIFV
Sbjct: 717 TGVVLGTYLAVMTVVFFWAAESTDFFSAKFGVRSISGNPHELTAAVYLQVSIVSQALIFV 776
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWS++ERPG L+ AF +AQL+ATLIAVYA+ +FA I G+GWGWAGVIWLYS VFY
Sbjct: 777 TRSRSWSYVERPGFWLISAFFMAQLIATLIAVYANWNFARIRGIGWGWAGVIWLYSIVFY 836
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGL--IGTD 827
IPLD++KFI+RY+LSG AW+ V + KTAFTSKKDYGK +R AQW + R+L GL T
Sbjct: 837 IPLDILKFIIRYSLSGRAWDNVIENKTAFTSKKDYGKGEREAQWAQAQRTLHGLQPAQTS 896
Query: 828 LEFNGRKSRPSLXXXXXXXXXXX--XXLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
FN + + L L E HTL+GHVESVV+ K LD+ IQ +T+
Sbjct: 897 DMFNDKSTYRELSEIADQAKRRAEVARLRERHTLKGHVESVVKQKGLDIEAIQQHYTL 954
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| TAIR|locus:2097895 HA4 "H(+)-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3103 (1097.4 bits), Expect = 0., P = 0.
Identities = 608/842 (72%), Positives = 686/842 (81%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+KFLKFL FMWNPLSWVMEAAA+MAI LANGGG+ PDWQDFVGI+ LL+INSTISFIE
Sbjct: 62 KESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIE 121
Query: 62 EXXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E PK KVLR+G+W EQDAA+LVPGDIISIKLGDI+PADARLLEGDP
Sbjct: 122 ENNAGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDP 181
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ SALTGESLPVTK + D V+SGSTCK GEIEAVVIATGVH+FFGKAAHLVD+T
Sbjct: 182 LKIDQ--SALTGESLPVTKSSGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTN 239
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPT 241
+GHFQQVLT+IGNFCICSIAVGM++EI+VM+PIQHR+YR AMPT
Sbjct: 240 QIGHFQQVLTAIGNFCICSIAVGMLIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPT 299
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+LTVD+NLIEVF +
Sbjct: 300 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFMK 359
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+D D +VL+AARA+RLENQDAIDAAI+ MLADPK+ARA I+EVHFLPFNP DKRTA+TY
Sbjct: 360 GVDADTVVLMAARASRLENQDAIDAAIVGMLADPKDARAGIQEVHFLPFNPTDKRTALTY 419
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID++GN +R SKGAPEQILNL K EI +VH +IDKFAERGLRSLAVA Q+V E K+
Sbjct: 420 IDNEGNTHRVSKGAPEQILNLAHNKSEIERRVHAVIDKFAERGLRSLAVAYQDVPEGRKD 479
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
S GGPW F GL+PLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 480 SAGGPWQFVGLMPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGTNM 539
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG++KDE+ ALPVDELIE+ADGFAGVFPEHKYEIVK LQ +KH+ GMTGDGVN
Sbjct: 540 YPSSALLGQNKDESIVALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 599
Query: 541 DAPALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYT----- 595
DAPALKK LTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 600 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 659
Query: 596 ------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
LGF+LLALIW++DFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFA
Sbjct: 660 ITIRIVLGFMLLALIWQFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFA 719
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHV----KXXXXXXXXXXXALYLQVSIISQA 705
TG+V G+Y+A++TV+F+WV TDFF F V K A+YLQVSIISQA
Sbjct: 720 TGVVFGSYMAMMTVIFFWVSYKTDFFPRTFGVATLEKTAHDDFRKLASAIYLQVSIISQA 779
Query: 706 LIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYS 765
LIFVTRS+SWSF+ERPG LM AF++AQLVATLIAVYA+ SFA I G+GWGWAGVIWLY+
Sbjct: 780 LIFVTRSRSWSFVERPGIFLMIAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYN 839
Query: 766 FVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIG 825
+FYIPLD IKF +RYALSG AW+LV +++ AFT +KD+GKE R QW + R+L GL
Sbjct: 840 IIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQA 899
Query: 826 TD 827
D
Sbjct: 900 PD 901
|
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| TAIR|locus:2172244 HA11 "H(+)-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3100 (1096.3 bits), Expect = 0., P = 0.
Identities = 607/842 (72%), Positives = 686/842 (81%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+KFLKFL FMWNPLSWVMEAAA+MAI LANGGG+ PDWQDFVGI+ LL+INSTISFIE
Sbjct: 58 KESKFLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIITLLVINSTISFIE 117
Query: 62 EXXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E PK KVLR+G+W EQDAA+LVPGDIISIKLGDI+PADARLLEGDP
Sbjct: 118 ENNAGNAAAALMARLAPKAKVLRDGRWGEQDAAILVPGDIISIKLGDIVPADARLLEGDP 177
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQ+S LTGESLPVTK D V+SGSTCK GE+EAVVIATGVH+FFGKAAHLVD+T
Sbjct: 178 LKIDQSS--LTGESLPVTKGPGDGVYSGSTCKQGELEAVVIATGVHTFFGKAAHLVDTTN 235
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPT 241
VGHFQQVLT+IGNFCICSIAVGMI+EI+VM+PIQHR+YR AMPT
Sbjct: 236 HVGHFQQVLTAIGNFCICSIAVGMIIEIVVMYPIQHRAYRPGIDNLLVLLIGGIPIAMPT 295
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+LTVD+NLIEVF +
Sbjct: 296 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFTK 355
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+D D +VL+AA+A+RLENQDAIDAAI+ MLADPKEARA ++EVHFLPFNP DKRTA+TY
Sbjct: 356 GVDADTVVLMAAQASRLENQDAIDAAIVGMLADPKEARAGVREVHFLPFNPTDKRTALTY 415
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDSDG +R SKGAPEQILNL + EI +VH +IDKFAERGLRSLAVA QEV E TKE
Sbjct: 416 IDSDGKMHRVSKGAPEQILNLAHNRAEIERRVHAVIDKFAERGLRSLAVAYQEVPEGTKE 475
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
S GGPW F GL+PLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 476 SAGGPWQFMGLMPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 535
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG+ KDE+ ALP+D+LIE+ADGFAGVFPEHKYEIVK LQ +KH+ GMTGDGVN
Sbjct: 536 YPSSALLGQHKDESIGALPIDDLIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVN 595
Query: 541 DAPALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYT----- 595
DAPALKK LTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 596 DAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 655
Query: 596 ------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
LGF+LLALIW++DFPPFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL+EIFA
Sbjct: 656 ITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLSEIFA 715
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHV----KXXXXXXXXXXXALYLQVSIISQA 705
TG+V G+Y+A++TV+F+W TDFF F V K A+YLQVSIISQA
Sbjct: 716 TGVVFGSYMAMMTVIFFWAAYKTDFFPRTFGVSTLEKTAHDDFRKLASAIYLQVSIISQA 775
Query: 706 LIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYS 765
LIFVTRS+SWS++ERPG LL+ AF++AQLVATLIAVYA+ SFA I G+GWGWAGVIWLY+
Sbjct: 776 LIFVTRSRSWSYVERPGMLLVVAFILAQLVATLIAVYANWSFAAIEGIGWGWAGVIWLYN 835
Query: 766 FVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIG 825
VFYIPLD+IKF++RYALSG AW+LV +++ AFT +KD+GKE R QW + R+L GL
Sbjct: 836 IVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKDFGKEQRELQWAHAQRTLHGLQA 895
Query: 826 TD 827
D
Sbjct: 896 PD 897
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| TAIR|locus:2165600 HA3 "H(+)-ATPase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3097 (1095.3 bits), Expect = 0., P = 0.
Identities = 606/896 (67%), Positives = 704/896 (78%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+K LKFL FMWNPLSWVMEAAA+MAI LANGGG+ PDWQDFVGIVCLL+INSTISF+E
Sbjct: 55 KESKLLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIVCLLVINSTISFVE 114
Query: 62 EXXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E PKTKVLR+G+W EQ+A++LVPGDI+SIKLGDIIPADARLLEGDP
Sbjct: 115 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEASILVPGDIVSIKLGDIIPADARLLEGDP 174
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LK+DQ SALTGESLP TK +EVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 175 LKVDQ--SALTGESLPATKGPGEEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 232
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPT 241
VGHFQ+VLT+IGNFCICSIAVG+ +EI+VM+PIQ R YRD AMPT
Sbjct: 233 QVGHFQKVLTAIGNFCICSIAVGIAIEIVVMYPIQRRHYRDGIDNLLVLLIGGIPIAMPT 292
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSH+LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD+NLIEV+ +
Sbjct: 293 VLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVYCK 352
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
++KD ++L AARA+R+ENQDAIDAA++ MLADPKEARA I+E+HFLPFNPVDKRTA+T+
Sbjct: 353 GVEKDEVLLFAARASRVENQDAIDAAMVGMLADPKEARAGIREIHFLPFNPVDKRTALTF 412
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
IDS+GNW+R SKGAPEQIL+LC + ++ +VH+ IDK+AERGLRSLAV+ Q V E TKE
Sbjct: 413 IDSNGNWHRVSKGAPEQILDLCNARADLRKRVHSTIDKYAERGLRSLAVSRQTVPEKTKE 472
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
S G PW F G+LPLFDPPRHDS +TIRRAL+LGV VKMITGDQLAIAKETGRRLGM +NM
Sbjct: 473 SSGSPWEFVGVLPLFDPPRHDSAETIRRALDLGVNVKMITGDQLAIAKETGRRLGMGSNM 532
Query: 482 YPSSSLLGRDKDENEA-LPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSSSLLG+ KDE A +PV++LIE+ADGFAGVFPEHKYEIVK LQE+KH+ GMTGDGVN
Sbjct: 533 YPSSSLLGKHKDEAMAHIPVEDLIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVN 592
Query: 541 DAPALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALKK LTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 593 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 652
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+L+ALIW++DF PFMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFA
Sbjct: 653 ITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFA 712
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKXXXXXXXXXXXALYLQVSIISQALIFV 709
TG+V+G Y+A++TV+F+W TDFF FHV+ ALYLQVSI+SQALIFV
Sbjct: 713 TGVVLGGYMAIMTVVFFWAAYKTDFFPRTFHVRDLRGSEHEMMSALYLQVSIVSQALIFV 772
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWSF ERPG L+ AF VAQL+AT IAVY + FA I G+GWGWAGVIWLYS VFY
Sbjct: 773 TRSRSWSFTERPGYFLLIAFWVAQLIATAIAVYGNWEFARIKGIGWGWAGVIWLYSIVFY 832
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTD-- 827
PLD++KF +RY L+G AW + D +TAFT+K++YG E+R AQW + R+L GL T+
Sbjct: 833 FPLDIMKFAIRYILAGTAWKNIIDNRTAFTTKQNYGIEEREAQWAHAQRTLHGLQNTETA 892
Query: 828 --LEFNGRKSRPSLXXXXXXXXXXXXXLGEIHTLRGHVESVVRLKNLDLNVIQAAH 881
+ G S L E+HTL+GHVESVV+LK LD+ A H
Sbjct: 893 NVVPERGGYRELSEIANQAKRRAEIARLRELHTLKGHVESVVKLKGLDIET--AGH 946
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| TAIR|locus:2081932 HA7 "H(+)-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2431 (860.8 bits), Expect = 1.8e-252, P = 1.8e-252
Identities = 503/799 (62%), Positives = 591/799 (73%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+K LKFL FMWNPLSWVMEAAA+MAI LA+GGG+ D+ DFVGIV LLLINSTISF+E
Sbjct: 57 KESKILKFLGFMWNPLSWVMEAAALMAIGLAHGGGKPADYHDFVGIVVLLLINSTISFVE 116
Query: 62 EXXXXXXXXXXXXXXXPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E PK K +R+G+W E DAA LVPGDI+SIKLGDIIPADARLLEGDP
Sbjct: 117 ENNAGNAAAALMAQLAPKAKAVRDGKWNEIDAAELVPGDIVSIKLGDIIPADARLLEGDP 176
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LKIDQA+ LTGESLPVTK V+SGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 177 LKIDQAT--LTGESLPVTKNPGASVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTT 234
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDXXXXXXXXXXXXXXXAMPT 241
VGHFQ+VLT+IGNFCICSIAVGM +EI+V++ +Q R YR AMPT
Sbjct: 235 HVGHFQKVLTAIGNFCICSIAVGMAIEIVVIYGLQKRGYRVGIDNLLVLLIGGIPIAMPT 294
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIG+HRL+QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD+NLIEVF R
Sbjct: 295 VLSVTMAIGAHRLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFKR 354
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
+D+DM VL+AARAARLENQDAID AI++ML+DPKEARA IKE+HFLPF+P ++RTA+TY
Sbjct: 355 GIDRDMAVLMAARAARLENQDAIDTAIVSMLSDPKEARAGIKELHFLPFSPANRRTALTY 414
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
+D +G +R SKGAPE+IL++ K EI KVH IDKFAERGLRSL +A QEV + +
Sbjct: 415 LDGEGKMHRVSKGAPEEILDMAHNKLEIKEKVHATIDKFAERGLRSLGLAYQEVPDGDVK 474
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
GGPW F LLPLFDPPRHDS TI RAL+LGV VKMITGDQLAIAKETGRRLGM TNM
Sbjct: 475 GEGGPWDFVALLPLFDPPRHDSAQTIERALHLGVSVKMITGDQLAIAKETGRRLGMGTNM 534
Query: 482 YPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSSSLL D N E + VDELIE ADGFAGVFPEHKYEIVK LQ +KH+ GMTGDGVN
Sbjct: 535 YPSSSLLS---DNNTEGVSVDELIENADGFAGVFPEHKYEIVKRLQSRKHICGMTGDGVN 591
Query: 541 DAPALKKXXXXXXXXXXXXXXXXXXXXXLTEPGLSVIISAVLTSRAIFQRMKNYTL---- 596
DAPALKK LTEPGLSVIISAVLTSRAIFQRMKNYT+
Sbjct: 592 DAPALKKADIGIAVDDATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 651
Query: 597 -------GFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+LL + WE+DFPPFMVL+IAILNDGTIMTISKDRVKPSP PD WKL EIFA
Sbjct: 652 ITIRIVMGFMLLCVFWEFDFPPFMVLVIAILNDGTIMTISKDRVKPSPTPDCWKLKEIFA 711
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKXXXXXXXXXXX---ALYLQVSIISQAL 706
TG+V+G YLA++TV+F+W +T+FF FHV+ A +L + S
Sbjct: 712 TGVVLGAYLAIMTVVFFWAAYETNFFHNIFHVRNFNQHHFKMKDKKVAAHLNEQMASAVY 771
Query: 707 IFV-TRSQSWSFLERPGALLMCAFVVAQLVATLIA-VYAHISFAYISGVG-WGWAGVI-- 761
+ V T SQ+ F+ R + +FV +IA + A + + IS + W +AG+
Sbjct: 772 LQVSTISQALIFVTRSRSW---SFVERPGFLLVIAFLIAQLVASVISAMANWPFAGIRSI 828
Query: 762 -WLYSFVFYIPLDVIKFIV 779
W ++ V +I +++ +++
Sbjct: 829 GWGWTGVIWI-FNIVTYML 846
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P19456 | PMA2_ARATH | 3, ., 6, ., 3, ., 6 | 0.7674 | 0.9875 | 0.9198 | no | no |
| P49380 | PMA1_KLULA | 3, ., 6, ., 3, ., 6 | 0.3706 | 0.8176 | 0.8031 | yes | no |
| Q9LV11 | PMA11_ARATH | 3, ., 6, ., 3, ., 6 | 0.7635 | 0.9966 | 0.9205 | no | no |
| P19657 | PMA2_YEAST | 3, ., 6, ., 3, ., 6 | 0.3590 | 0.8607 | 0.8025 | yes | no |
| Q58623 | Y1226_METJA | 3, ., 6, ., 3, ., - | 0.4083 | 0.8289 | 0.9093 | yes | no |
| Q43128 | PMA10_ARATH | 3, ., 6, ., 3, ., 6 | 0.8017 | 0.9909 | 0.9239 | yes | no |
| Q08435 | PMA1_NICPL | 3, ., 6, ., 3, ., 6 | 0.7624 | 0.9966 | 0.9195 | N/A | no |
| Q08436 | PMA3_NICPL | 3, ., 6, ., 3, ., 6 | 0.7580 | 0.9966 | 0.9205 | N/A | no |
| P83970 | PMA1_WHEAT | 3, ., 6, ., 3, ., 6 | 0.7533 | 0.9966 | 0.9253 | N/A | no |
| Q42556 | PMA9_ARATH | 3, ., 6, ., 3, ., 6 | 0.7472 | 0.9966 | 0.9224 | no | no |
| Q03194 | PMA4_NICPL | 3, ., 6, ., 3, ., 6 | 0.7764 | 0.9954 | 0.9233 | N/A | no |
| Q9SJB3 | PMA5_ARATH | 3, ., 6, ., 3, ., 6 | 0.7505 | 0.9966 | 0.9272 | no | no |
| P22180 | PMA1_SOLLC | 3, ., 6, ., 3, ., 6 | 0.7558 | 0.9966 | 0.9205 | N/A | no |
| Q9M2A0 | PMA8_ARATH | 3, ., 6, ., 3, ., 6 | 0.7693 | 0.9954 | 0.9272 | no | no |
| Q9SU58 | PMA4_ARATH | 3, ., 6, ., 3, ., 6 | 0.7669 | 0.9966 | 0.9166 | no | no |
| Q7XPY2 | PMA1_ORYSJ | 3, ., 6, ., 3, ., 6 | 0.7677 | 0.9966 | 0.9253 | yes | no |
| P20431 | PMA3_ARATH | 3, ., 6, ., 3, ., 6 | 0.7483 | 0.9875 | 0.9188 | no | no |
| P20649 | PMA1_ARATH | 3, ., 6, ., 3, ., 6 | 0.7572 | 0.9966 | 0.9272 | no | no |
| P23980 | PMA2_SOLLC | 3, ., 6, ., 3, ., 6 | 0.7286 | 0.7757 | 0.9730 | N/A | no |
| Q9SH76 | PMA6_ARATH | 3, ., 6, ., 3, ., 6 | 0.7617 | 0.9954 | 0.9262 | no | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 883 | |||
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-166 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-111 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-89 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-70 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-70 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-66 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-62 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-61 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 6e-60 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 3e-55 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-54 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-54 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 6e-40 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 2e-38 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-34 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-33 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 9e-29 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-27 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 4e-27 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 3e-26 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-24 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-20 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 5e-20 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 8e-14 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 6e-13 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 6e-07 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 1e-06 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-06 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-05 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 9e-05 | |
| PRK01158 | 230 | PRK01158, PRK01158, phosphoglycolate phosphatase; | 5e-04 | |
| TIGR01487 | 215 | TIGR01487, Pglycolate_arch, phosphoglycolate phosp | 0.001 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 0.002 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 1102 bits (2853), Expect = 0.0
Identities = 428/753 (56%), Positives = 535/753 (71%), Gaps = 35/753 (4%)
Query: 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
+ LKFL F WNPLSWVMEAAA++AI L N W DFV I+ LLL+N+TI FIEE
Sbjct: 24 VSPLLKFLGFFWNPLSWVMEAAAIIAIALEN-------WVDFVIILGLLLLNATIGFIEE 76
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
N AGNA AL LAPK +VLR+G+W+E A+ LVPGD++ +K+GDI+PAD RL EGD +
Sbjct: 77 NKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYI 136
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE- 181
++DQA ALTGESLPVTKKT D +SGST K GE EAVV ATG+++FFGKAA LV STE
Sbjct: 137 QVDQA--ALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTET 194
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
GH Q++L+ IG F I I V +++E++V+F + S+R+G+ LVLL+GGIPIAMP
Sbjct: 195 GSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMPA 254
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+A+G+ L+++ AI R+TAIEE+AGMD+LCSDKTGTLTLN+L++D L F
Sbjct: 255 VLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFN 312
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
DKD ++L AA A+R E+QDAID A++ D KEAR K + F+PF+PVDKRT T
Sbjct: 313 GFDKDDVLLYAALASREEDQDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATV 372
Query: 362 IDSD-GNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK 420
D + G ++ +KGAP+ IL+LC KKEI KV +D+ A RG R+L VA +
Sbjct: 373 EDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVA--------R 424
Query: 421 ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATN 480
G W F GLLPLFDPPRHD+ +TI RA +LGV VKM+TGD LAIAKET RRLG+ TN
Sbjct: 425 TDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN 484
Query: 481 MYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
+Y + LL D ++ + E++E+ADGFA VFPEHKYEIV+ILQ++ H+VGMTGDGVN
Sbjct: 485 IYTADVLLKGDNRDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVN 544
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----- 595
DAPALKKAD+GIAVA ATDAAR AADIVLTEPGLSVI+ A+L SR IFQRMK+Y
Sbjct: 545 DAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIA 604
Query: 596 ------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
F LL LI + FPP MV+IIAILNDGTIMTI+ D VKPS P W L E+F
Sbjct: 605 ETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMTIAYDNVKPSKLPQRWNLREVFT 664
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709
V+G YL + T L + +DT FF F ++ L N + S +YLQVSI A IFV
Sbjct: 665 MSTVLGIYLVISTFLLLAIALDTTFFIDKFGLQLLHGN---LQSFIYLQVSISGHATIFV 721
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVY 742
TR+ + + ERPG LL AFV+AQ++AT IAVY
Sbjct: 722 TRTHGFFWSERPGKLLFGAFVIAQIIATFIAVY 754
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 508 bits (1309), Expect = e-166
Identities = 243/857 (28%), Positives = 381/857 (44%), Gaps = 98/857 (11%)
Query: 6 FLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNA 65
KFL +P ++ AA+ + A G D + I+ +++IN+ + F++E A
Sbjct: 71 LKKFLRQFKDPFIILLLVAAL---LSAFVGDWVDAGVDAIVILLVVVINALLGFVQEYRA 127
Query: 66 GNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKID 125
A AL +PK KVLR+G++ E A+ LVPGDI+ ++ GD++PAD RLLE L++D
Sbjct: 128 EKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVD 187
Query: 126 QASSALTGESLPVTKKTADE--------------VFSGSTCKHGEIEAVVIATGVHSFFG 171
+ SALTGESLPV K+ +FSG+T G + +V+ATG + FG
Sbjct: 188 E--SALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFG 245
Query: 172 KAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNL--- 227
K A L+ + EV Q+ L +G F + V ++ ++F + +G+
Sbjct: 246 KIARLLPTKKEVKTPLQRKLNKLGKF----LLVLALVLGALVFVVGLFRGGNGLLESFLT 301
Query: 228 -LVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL 286
L L + +P +P V+++ LA+G+ R+++ AI + + AIE + +DV+CSDKTGTLT
Sbjct: 302 ALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQ 361
Query: 287 NRLTV---------DRNLIEVFNRNMDKDMIVLLAARA--ARLENQ------DAIDAAII 329
N++TV + + +L AA E D + A++
Sbjct: 362 NKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALV 421
Query: 330 ------NMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLC 383
D + +PF+ KR ++ +G + KGAPE IL C
Sbjct: 422 EFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERC 481
Query: 384 KEKKEIAV-------KVHTIIDKFAERGLRSLAVAIQEVSE----MTKESPGGPWTFCGL 432
K E+ + + + A GLR LAVA +++ + F GL
Sbjct: 482 KSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGL 541
Query: 433 LPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRD- 491
+ DPPR D + I G+ V MITGD + A + G+ + + G +
Sbjct: 542 TGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAEL 601
Query: 492 --KDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD 549
+ E + EL+EE FA V PE K IV+ LQ+ HVV MTGDGVNDAPALK AD
Sbjct: 602 DALSDEE---LAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAAD 658
Query: 550 IGIAVAD-ATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNY-------TLGFVLL 601
+GIA+ TDAA+ AADIVL + + I+ AV+ R ++ +K + +G VL
Sbjct: 659 VGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLT 718
Query: 602 ALI------WEYDFPPFMVLIIAILNDGTI---MTISK---DRVKPSPRPDSWKL--NEI 647
LI + P +L I +L D + + D +K PR L +I
Sbjct: 719 LLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRKI 778
Query: 648 FATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALI 707
F I+I L+ + + +++ + L + + + + +I L
Sbjct: 779 FWRFILIIGLLSAILFILTFLLY---LLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLT 835
Query: 708 FVTRSQS---WSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLY 764
RS+ S L L A +V ++ LI + WL
Sbjct: 836 LAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPP--LNLKIFQPTPLSLFEWLI 893
Query: 765 SFVFYIPLDVIKFIVRY 781
+ + L I Y
Sbjct: 894 AIAVALLLLYIVVSELY 910
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 352 bits (906), Expect = e-111
Identities = 187/593 (31%), Positives = 281/593 (47%), Gaps = 83/593 (13%)
Query: 47 IVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK--VLREGQWKEQDAAVLVPGDIISI 104
I+ L+L+ + ++ A + +L L VLR G WKE A LVPGD++ +
Sbjct: 2 ILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 105 KLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKK----------TADEVFSGSTCKH 154
K G+ +PAD LL G +D+ S LTGES PV K T D VF+G+
Sbjct: 61 KSGETVPADGVLLSGS-CFVDE--SNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFG 117
Query: 155 GEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMF 213
G + VV TG+ + G+ A +V + E Q + NF + + L + +
Sbjct: 118 GTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYL 177
Query: 214 PIQHRSYRDG---INNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEM 270
I+ + L++L+ +P A+P ++V LA+G RL+++G + + + A+EE+
Sbjct: 178 FIRGWDPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKGILVRNLNALEEL 237
Query: 271 AGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAI-- 328
+D LCSDKTGTLT N++T+ V+ +D L A + D ++ A+
Sbjct: 238 GKVDYLCSDKTGTLTKNKMTLQG----VYIDGGKEDNSSSLVACDNNYLSGDPMEKALLK 293
Query: 329 -INMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKK 387
++ + K + PF+ V KR ++ DG+ KGAPE IL C +
Sbjct: 294 SAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNNYE 353
Query: 388 EIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTI 447
E + A +GLR LA A +E+ F GL+ DP R D+ +TI
Sbjct: 354 E-------KYLELARQGLRVLAFASKELE--------DDLEFLGLITFEDPLRPDAKETI 398
Query: 448 RRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA 507
G+ V MITGD + AK + LG+
Sbjct: 399 EELKAAGIKVVMITGDNVLTAKAIAKELGI------------------------------ 428
Query: 508 DGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADI 567
D FA V PE K +IV+ LQ+K H+V MTGDGVNDAPALKKAD+GIA+ A+ AADI
Sbjct: 429 DVFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-----GAKAAADI 483
Query: 568 VLTEPGLSVIISAVLTSRAIFQRMKNYTLGFVLLALIWEYDFPPFMVLIIAIL 620
VL + LS I+ AV R IF +K+ + A+ Y+ + ++ I+
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKS----NIFWAIA--YNLILIPLALLLIV 530
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 302 bits (774), Expect = 4e-89
Identities = 221/758 (29%), Positives = 361/758 (47%), Gaps = 118/758 (15%)
Query: 2 QENKFLKFLS-FMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFI 60
E+ + KFLS F+ NPL ++ A+AV+++ + N D V I +LI T+ F+
Sbjct: 47 DESLWKKFLSQFVKNPLILLLIASAVISVFMGN-------IDDAVSITLAILIVVTVGFV 99
Query: 61 EENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGD 120
+E + + AL + P+ ++REG+ + A+ LVPGD++ + +GD +PAD R++E
Sbjct: 100 QEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAV 159
Query: 121 PLKIDQASSALTGESLPVTKKTA--------------DEVFSGSTCKHGEIEAVVIATGV 166
L ID+ S LTGE+ PV+K TA + F G+ + G + +V+ TG
Sbjct: 160 DLSIDE--SNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGS 217
Query: 167 HSFFGKAAHLVDSTEVVGH-FQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGIN 225
++ FG ++ + E Q+ + +G + ++ G+I I ++ Q + + +
Sbjct: 218 NTEFGAVFKMMQAIEKPKTPLQKSMDLLGK-QLSLVSFGVIGVICLVGWFQGKDWLEMFT 276
Query: 226 NLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 285
+ L + IP +P +++VTLA+G R+S++ AI +++ ++E + ++V+CSDKTGTLT
Sbjct: 277 ISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLT 336
Query: 286 LNRLTVDR--------NLIEVFNRNMDKDMIV----------------LLAA---RAARL 318
N +TV + ++ + N ++IV L A A+
Sbjct: 337 KNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKF 396
Query: 319 ENQDAI------DAAIINMLA-----DPKEARANIKEVHFLPFNPVDKRTAITYIDSDGN 367
N+ D A+I +L D +E + EV PF+ K A+ +
Sbjct: 397 RNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEV---PFSSERKWMAVKCVHRQDR 453
Query: 368 WYRAS-KGAPEQILNLCKEKKEIAVKVHTIID-----------KFAERGLRSLAVAIQEV 415
KGA EQ+L C ++ K T+ + A GLR +A A
Sbjct: 454 SEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFA---- 509
Query: 416 SEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRL 475
G TF GL+ + DPPR + + + GV + MITGD A RRL
Sbjct: 510 ----SGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRL 565
Query: 476 GMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMT 535
GM S S+ G D + + +++ + FA PEHK +IVK LQ++ VV MT
Sbjct: 566 GMP--SKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMT 623
Query: 536 GDGVNDAPALKKADIGIAVAD-ATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNY 594
GDGVNDAPALK ADIG+A+ TD A+ AAD++LT+ + I+SA+ + IF +KN+
Sbjct: 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNF 683
Query: 595 ----------TLGFVLLALIWEYDFP--PFMVLIIAILNDGT------IMTISKDRVKPS 636
L + LA + + P +L I IL DG + + KD ++
Sbjct: 684 ITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKP 743
Query: 637 PRPDSWK------LNEIFATGIVIGTYLALVTVLFYWV 668
PRP + K + +I + I+I T+ +
Sbjct: 744 PRPRNDKILTKDLIKKILVSAIIIVV----GTLFVFVR 777
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 249 bits (638), Expect = 2e-70
Identities = 197/700 (28%), Positives = 318/700 (45%), Gaps = 88/700 (12%)
Query: 45 VGIVCLLLINSTI-SFIEENNAGNAAAALMAHLAPKTKVLR------EGQWKEQDAAVLV 97
I+ L+++ S + FI+E+ A AA AL + VLR G E LV
Sbjct: 91 TVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALV 150
Query: 98 PGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADE------------ 145
PGD+I + GDIIPADAR++ L I+Q SALTGESLPV K D+
Sbjct: 151 PGDLIELAAGDIIPADARVISARDLFINQ--SALTGESLPVEKFVEDKRARDPEILEREN 208
Query: 146 -VFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVG 204
F G+ G +AVV+ATG ++FG A F + + S+ I
Sbjct: 209 LCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLI----RF 264
Query: 205 MILEIIVMFPIQHRSYRDGINNLLVLL---IGGIPIAMPTVLSVTLAIGSHRLSQQGAIT 261
M++ + V+ I D + L L +G P +P ++S LA G+ +S++ I
Sbjct: 265 MLVMVPVVLMINGLMKGDWLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIV 324
Query: 262 KRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQ 321
K ++AI+ MD+LC+DKTGTLT +++ ++ I+ ++ + + + +
Sbjct: 325 KELSAIQNFGAMDILCTDKTGTLTQDKIELE-KHIDSSGETSERVLKMAWLNSYFQTGWK 383
Query: 322 DAIDAAIINMLAD--PKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQI 379
+ +D A++ L + ++ + K+V +PF+ +R ++ + KGA E++
Sbjct: 384 NVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEM 443
Query: 380 LNLCKEKKE----------IAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTF 429
L +C K+ ++ + + +G+R +AVA TK G F
Sbjct: 444 LTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVA-------TKTLKVGEADF 496
Query: 430 C----------GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT 479
G L DPP+ + + I G+ VK++TGD + + +G+
Sbjct: 497 TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA 556
Query: 480 NMYPSSSLLGRDKDENEALPVDELIEEADG---FAGVFPEHKYEIVKILQEKKHVVGMTG 536
N + LLG D E L +EL E FA + P K I+ +L++ H VG G
Sbjct: 557 NDF----LLGADI---EELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLG 609
Query: 537 DGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNY-- 594
DG+NDAPAL+KAD+GI+V A D A+ A+DI+L E L V+ V+ R F + Y
Sbjct: 610 DGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLK 669
Query: 595 -----TLGFVLLALIWEYDFPPFM------VLIIAILNDGTIMTISKDRVKPS--PRPDS 641
G V L+ F PF+ +LI +L D + +T+ D++ +P
Sbjct: 670 MTASSNFGNVFSVLV-ASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQ 728
Query: 642 WKLNEIFATGIVIG---TYLALVTVLFYWVVVDTDFFETH 678
W+ + + IG + + T L W V + E
Sbjct: 729 WEQKGMGRFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQ 768
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 250 bits (640), Expect = 2e-70
Identities = 185/613 (30%), Positives = 293/613 (47%), Gaps = 103/613 (16%)
Query: 47 IVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLR------EGQWKEQDAAVLVPGD 100
I ++ I++ ++FI+E + AA AL A ++ VLR E W E LVPGD
Sbjct: 128 IALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGD 187
Query: 101 IISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTK----KTADE---------VF 147
II + GD+IPAD R+L+ L + QA +LTGESLPV K + + F
Sbjct: 188 IIKLAAGDMIPADLRILQARDLFVAQA--SLTGESLPVEKFATTRQPEHSNPLECDTLCF 245
Query: 148 SGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE-VVGHFQQVLTSIGNFCICSIAVGMI 206
G+ G +AVVIATG +++FG+ A V + FQQ I ++ +I
Sbjct: 246 MGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQ--------GISRVSWLLI 297
Query: 207 LEIIVMFPIQHRSYRDGINNLLVLLIGG--------------------IPIAMPTVLSVT 246
++VM P+ VLLI G P +P +++ T
Sbjct: 298 RFMLVMAPV-------------VLLINGYTKGDWWEAALFALSVAVGLTPEMLPMIVTST 344
Query: 247 LAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKD 306
LA G+ +LS+Q I KR+ AI+ MD+LC+DKTGTLT +++ ++ + ++ + ++
Sbjct: 345 LARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENH-TDISGKTSER- 402
Query: 307 MIVLLAARAARLEN------QDAIDAAIINMLADPKEAR--ANIKEVHFLPFNPVDKRTA 358
VL +A L + ++ +D A++ + + + +++ +PF+ +R +
Sbjct: 403 --VL---HSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMS 457
Query: 359 ITYIDSDGNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSL 408
+ ++ + KGA E+ILN+C + + ++ + D +GLR +
Sbjct: 458 VVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVV 517
Query: 409 AVAIQEVSEMTKESPG----GPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQ 464
AVA + + + G + DPP+ + ++ GV VK++TGD
Sbjct: 518 AVATKYLPA-REGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDS 576
Query: 465 LAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDEL---IEEADGFAGVFPEHKYEI 521
+A + +G+ L+G D E L DEL E FA + P HK I
Sbjct: 577 ELVAAKVCHEVGLDAGEV----LIGSDI---ETLSDDELANLAERTTLFARLTPMHKERI 629
Query: 522 VKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAV 581
V +L+ + HVVG GDG+NDAPAL+ ADIGI+V A D AR AADI+L E L V+ V
Sbjct: 630 VTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGV 689
Query: 582 LTSRAIFQRMKNY 594
+ R F M Y
Sbjct: 690 IEGRRTFANMLKY 702
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 239 bits (612), Expect = 1e-66
Identities = 185/635 (29%), Positives = 291/635 (45%), Gaps = 80/635 (12%)
Query: 15 NPLSWVMEAAA----VMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAA 70
NP +V+ A L G+ D + I+ ++L++ + F +E + AA
Sbjct: 81 NPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAE 140
Query: 71 ALMAHLAPKTKVLR------EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 124
AL A + VLR E +E LVPGDI+ + GD+IPAD RL+E L I
Sbjct: 141 ALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFI 200
Query: 125 DQASSALTGESLPVTK---------KTADEV--------------FSGSTCKHGEIEAVV 161
QA LTGE+LPV K K+AD + F G+ G AVV
Sbjct: 201 SQA--VLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVV 258
Query: 162 IATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYR 221
+ATG ++FG A + T F + + S+ I M++ + V+ I +
Sbjct: 259 VATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLI----RFMLVMVPVVLLINGFTKG 314
Query: 222 DGINNLLVLL---IGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 278
D + LL L +G P +P ++S LA G+ ++++ + KR+ AI+ MDVLC+
Sbjct: 315 DWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCT 374
Query: 279 DKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLEN------QDAIDAAIINML 332
DKTGTLT +R+ ++ +L + + KD VL + A L + ++ +D A++
Sbjct: 375 DKTGTLTQDRIILEHHL----DVSGRKDERVL---QLAWLNSFHQSGMKNLMDQAVVA-F 426
Query: 333 ADPKEARA---NIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEI 389
A+ ++V LPF+ V +R ++ D+ G KGA E++L + ++
Sbjct: 427 AEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD- 485
Query: 390 AVKVHTIID-----------KFAERGLRSLAVAIQEVSEMTKESP-----GGPWTFCGLL 433
V + + + G R L VA +E+ + G L
Sbjct: 486 GDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFL 545
Query: 434 PLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKD 493
DPP+ + I GV VK++TGD + + R +G+ P LLG + +
Sbjct: 546 TFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLE----PGEPLLGTEIE 601
Query: 494 ENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 553
+ + +EE FA + P K ++K LQ H VG GDG+NDAPAL+ AD+GI+
Sbjct: 602 AMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGIS 661
Query: 554 VADATDAARGAADIVLTEPGLSVIISAVLTSRAIF 588
V D A+ +ADI+L E L V+ V+ R F
Sbjct: 662 VDSGADIAKESADIILLEKSLMVLEEGVIKGRETF 696
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 228 bits (582), Expect = 1e-62
Identities = 175/671 (26%), Positives = 288/671 (42%), Gaps = 93/671 (13%)
Query: 3 ENKFLKFLSFMWNPLSWVM----EAAAVMAIVLA------NGGGQGPDWQDFVGIVCLLL 52
E FL +W LS AAV+++VL W + V I+ ++
Sbjct: 81 EKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVI 140
Query: 53 INSTISFIEENNAGNAAAALM-AHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIP 111
+ ++ + + L A K V+R GQ ++ +V GDI+S+ GD++P
Sbjct: 141 LVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVP 200
Query: 112 ADARLLEGDPLKIDQASSALTGESLPVTKKTADEVF--SGSTCKHGEIEAVVIATGVHSF 169
AD + G L+ID++S +TGES P+ K + F SG+ G +V A GV+SF
Sbjct: 201 ADGVFISGLSLEIDESS--ITGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSF 258
Query: 170 FGKAAHLV-----DSTEVVGHFQQVLTSIGNF----CICSIAVGMILEIIVMFPIQHRSY 220
GK + DST + ++ IG F + V + + + R
Sbjct: 259 GGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDT 318
Query: 221 RDGINNLLVLLIGGIPI---AMPTVL--SVT--LAIGSHRLSQQGAITKRMTAIEEMAGM 273
+ L I + I A+P L +VT LA ++ + + + + A E M
Sbjct: 319 EEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSA 378
Query: 274 DVLCSDKTGTLTLNRLTVDRNLI-------EVFNRNMDK----DMIVLLAARAARLENQD 322
+CSDKTGTLT N ++V + I RN+ K ++ ++ ++ E D
Sbjct: 379 TAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVD 438
Query: 323 A----------IDAAIINM----LADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNW 368
+ A+++ L D +E RA K V PFN K ++ S G +
Sbjct: 439 RGGKRAFIGSKTECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKY 498
Query: 369 YRASKGAPEQILNLCK---------------EKKEIAVKVHTIIDKFAERGLRSLAVA-- 411
KGA E +L C+ +K A +I+ A LR++ +A
Sbjct: 499 REFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCA----DVIEPLASDALRTICLAYR 554
Query: 412 -IQEVSEMTKESPGGPWTFCGLLPLFDPPR---HDSVDTIRRALNLGVCVKMITGDQLAI 467
K+ P T G++ + DP R ++V +RA G+ V+M+TGD +
Sbjct: 555 DFAPEEFPRKDYPNKGLTLIGVVGIKDPLRPGVREAVQECQRA---GITVRMVTGDNIDT 611
Query: 468 AKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADG---FAGVFPEHKYEIVKI 524
AK R G+ T L + E +L +E+ A P K +V +
Sbjct: 612 AKAIARNCGILT-----FGGLAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLM 666
Query: 525 LQEKKHVVGMTGDGVNDAPALKKADIGIAVADA-TDAARGAADIVLTEPGLSVIISAVLT 583
L++ VV +TGDG NDAPALK AD+G ++ + T+ A+ A+DI+L + + I+ AV
Sbjct: 667 LKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKW 726
Query: 584 SRAIFQRMKNY 594
R ++ ++ +
Sbjct: 727 GRNVYDNIRKF 737
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 221 bits (566), Expect = 2e-61
Identities = 151/572 (26%), Positives = 233/572 (40%), Gaps = 85/572 (14%)
Query: 45 VGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKT--KVLREGQWKEQDAAVLVPGDII 102
++ L L+ + + A A AL+ LAPKT V +G+ +E + GDI+
Sbjct: 178 AMLIFLFLLGRYLEARAKGRARRAIRALLD-LAPKTATVVRGDGEEEEVPVEEVQVGDIV 236
Query: 103 SIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVI 162
++ G+ IP D ++ G +D+ S LTGESLPV KK DEVF+G+ G + V
Sbjct: 237 LVRPGERIPVDGVVVSGSSS-VDE--SMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVT 293
Query: 163 ATGVHSFFGKAAHLV-DSTEVVGHFQQVLTSI-GNFCICSIAVGMILEIIVMFPIQHRSY 220
G + + LV ++ Q++ + F + + + +
Sbjct: 294 RVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGGGDWE 353
Query: 221 RDGINNLLVLLIGGIPIAMPTVLSVTLAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCS 278
L VL+I P A+ L+ AI G R +++G + K A+E +A +D +
Sbjct: 354 TALYRALAVLVIA-CPCAL--GLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVF 410
Query: 279 DKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEA 338
DKTGTLT + V +V + D+D ++ LAA + + AI+
Sbjct: 411 DKTGTLTEGKPEV----TDVVALDGDEDELLALAAALEQHSEH-PLAKAIVK-------- 457
Query: 339 RANIKEVHFLPFNPVDKRTAIT----YIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVH 394
A + + V+ I + DG G + E+ +
Sbjct: 458 AAAERGLP-----DVEDFEEIPGRGVEAEVDGERVLV--GNARLLG----EEGIDLPLLS 506
Query: 395 TIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLG 454
I+ G + VA+ G++ L D R D+ + I LG
Sbjct: 507 ERIEALESEGKTVVFVAVDG-------------KLVGVIALADELRPDAKEAIAALKALG 553
Query: 455 VCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF 514
+ V M+TGD A+ + LG I+E A +
Sbjct: 554 IKVVMLTGDNRRTAEAIAKELG---------------------------IDEV--RAELL 584
Query: 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGL 574
PE K EIV+ LQ + V M GDG+NDAPAL AD+GIA+ TD A AAD+VL L
Sbjct: 585 PEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDL 644
Query: 575 SVIISAVLTSRAIFQRMK-NYTLGFVL-LALI 604
S + A+ SRA + +K N F I
Sbjct: 645 SAVPEAIDLSRATRRIIKQNLFWAFGYNAIAI 676
|
Length = 713 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 213 bits (545), Expect = 6e-60
Identities = 154/602 (25%), Positives = 247/602 (41%), Gaps = 103/602 (17%)
Query: 50 LLLINSTISFIEENNAGNAAAAL--MAHLAPKTKVLREGQWKEQDAAV--LVPGDIISIK 105
LL + +EE G A+ AL + LAP T + +G E++ V L GDI+ ++
Sbjct: 24 LLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVR 83
Query: 106 LGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATG 165
G+ IP D ++ G+ +D+ SALTGES+PV KK DEVF+G+ G + V G
Sbjct: 84 PGERIPVDGVVISGESE-VDE--SALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLG 140
Query: 166 VHSFFGKAAHLVDSTEVV-GHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGI 224
S + LV+ + Q++ I ++ + ++ +L +V + +
Sbjct: 141 EDSTLAQIVELVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---GALGAL 197
Query: 225 NNLLVLLIGGIPIAMPTVLSVTLAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTG 282
L +L+ P A+ L+ +AI +++G + K A+E++A + + DKTG
Sbjct: 198 YRALAVLVVACPCAL--GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTG 255
Query: 283 TLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQD--AIDAAIINMLADPKEARA 340
TLT + TV IE + + +L A AA LE + AI+ A
Sbjct: 256 TLTTGKPTVVD--IEPLDDASISEEELL--ALAAALEQSSSHPLARAIVR--------YA 303
Query: 341 NIKEVHFLPFNPVDKRTAI-----TYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHT 395
+ + D +D + + A
Sbjct: 304 KKRGLE--LPKQEDVEEVPGKGVEATVDGGEEVRIGNPR-----FLELAIEPISASPDL- 355
Query: 396 IIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTI---RRALN 452
+++ +G + VA+ G++ L D R ++ + I +RA
Sbjct: 356 -LNEGESQGKTVVFVAVDG-------------ELLGVIALRDQLRPEAKEAIAALKRAGG 401
Query: 453 LGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG 512
+ + M+TGD + A+ LG I+E A
Sbjct: 402 IKLV--MLTGDNRSAAEAVAAELG---------------------------IDEV--HAE 430
Query: 513 VFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEP 572
+ PE K IVK LQE+ VV M GDG+NDAPAL AD+GIA+ +D A AADIVL
Sbjct: 431 LLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLND 490
Query: 573 GLSVIISAVLTSRAIFQRMKN-------YTLGFVLLALIWEYDFPPFMVL------IIAI 619
LS + +A+ SR + +K Y L + LA VL ++ +
Sbjct: 491 DLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLPLWLLAVLLHEGSTVLVV 550
Query: 620 LN 621
LN
Sbjct: 551 LN 552
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 200 bits (512), Expect = 3e-55
Identities = 157/587 (26%), Positives = 245/587 (41%), Gaps = 89/587 (15%)
Query: 27 MAIVLANGGGQGPDWQDFVGIVCLLLINSTIS-FIEENNAGNAAAAL--MAHLAPKT--K 81
+ +LAN G F +L+ + ++E G A+ AL +A L P T
Sbjct: 36 LVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATL 95
Query: 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKK 141
+ +G+ +E +L PGDI+ + G+ IP D ++EG+ ++D+ S +TGESLPV KK
Sbjct: 96 LTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGES-EVDE--SLVTGESLPVPKK 152
Query: 142 TADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEV----VGHFQQVLTSIGNFC 197
D V +G+ G + ATG + + LV + + + F
Sbjct: 153 VGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGY--FV 210
Query: 198 ICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLS----VTLAIGSHR 253
IA+ +I +I + L + + + IA P L +A+ +
Sbjct: 211 PVVIAIALITFVIWLILGAD------FVFALEVAVTVLIIACPCALGLATPTVIAVATGL 264
Query: 254 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAA 313
++ G + K A+E A +D + DKTGTLT + TV + VF D+D ++ LAA
Sbjct: 265 AAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTV--TDVHVFG-ESDRDELLALAA 321
Query: 314 RAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASK 373
+ AI++ K D + I I +G +
Sbjct: 322 ALEAGSEH-PLAKAIVSYA----------KAKGITLSQVSDFKA-IPGIGVEG----TVE 365
Query: 374 GAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLL 433
G Q+ N K E +K D E G + +V + V+ G+L
Sbjct: 366 GHTIQLGN-EKLLGENGLK----TDGEVEEGGGTTSV-LVAVNG----------ELAGVL 409
Query: 434 PLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKD 493
L D + ++ + I+ G+ M+TGD AK + LG
Sbjct: 410 ALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELG----------------- 452
Query: 494 ENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 553
IE A V P+ K ++K LQEK VV M GDG+NDAPAL +AD+GIA
Sbjct: 453 ----------IENV--RAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQADVGIA 500
Query: 554 VADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMK-NYTLGFV 599
+ TD A AAD+VL L+ + +A+ SR +R+K N F
Sbjct: 501 IGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFG 547
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 2e-54
Identities = 76/225 (33%), Positives = 130/225 (57%), Gaps = 6/225 (2%)
Query: 47 IVCLLLINSTISFIEENNAGNAAAALMAHLAPK-TKVLREGQWKEQDAAVLVPGDIISIK 105
I+ L+LIN+ + +E A A AL L P V+R+G+ +E A LV GDI+ +K
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 106 LGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATG 165
GD +PAD R++EG L++D+ SALTGESLPV K D VF+G+ GE++ +V ATG
Sbjct: 62 PGDRVPADGRIIEGS-LEVDE--SALTGESLPVEKSRGDTVFAGTVVLSGELKVIVTATG 118
Query: 166 VHSFFGKAAHLVDSTEVV-GHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGI 224
+ GK A LV+ + Q++L + + I + + + + +++ + + + +
Sbjct: 119 EDTELGKIARLVEEAKSAKTPLQRLLDKLAKI-LVPIVLALAILVFLIWFFRGGDFLEAL 177
Query: 225 NNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEE 269
L +L+ P A+P + + LA+G+ RL+++G + K ++A+E
Sbjct: 178 LRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 3e-54
Identities = 191/722 (26%), Positives = 321/722 (44%), Gaps = 124/722 (17%)
Query: 5 KFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQD-FVGIV--CLLLINSTISFIE 61
KF + L ++ L W+ +A + + P + ++G+V +++I S+ +
Sbjct: 65 KFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQ 124
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E + + + + V+R+G+ +A +V GD++ +K GD IPAD R++
Sbjct: 125 EAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG 184
Query: 122 LKIDQASSALTGESLPVTK----------KTADEVFSGSTCKHGEIEAVVIATGVHSFFG 171
K+D +S+LTGES P T+ +T + F + C G +V+ TG + G
Sbjct: 185 CKVD--NSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMG 242
Query: 172 KAAHLVDSTEV--------VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDG 223
+ A L E + HF ++T + F +G+ I+ + I ++ +
Sbjct: 243 RIASLASGLENGKTPIAIEIEHFIHIITGVAVF------LGVSFFILSL--ILGYTWLEA 294
Query: 224 INNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 283
+ L+ +++ +P + ++V L + + R++++ + K + A+E + +CSDKTGT
Sbjct: 295 VIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGT 354
Query: 284 LTLNRLTV-----DRNLIEV------FNRNMDKD--------MIVLLAARAARLENQ--- 321
LT NR+TV D + E + DK I L RA Q
Sbjct: 355 LTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENV 414
Query: 322 ---------DAIDAAIINM----LADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNW 368
DA ++A++ L E R +V +PFN +K + + D
Sbjct: 415 PILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRD 474
Query: 369 YR---ASKGAPEQILNLC-------------KEKKEIAVKVHTIIDKFAER--GLRSLAV 410
R KGAPE+IL C +E KE + + ER G L +
Sbjct: 475 PRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYL 534
Query: 411 AIQEVSEMTK------ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQ 464
++ E + P F GL+ + DPPR D + + + G+ V M+TGD
Sbjct: 535 PDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDH 594
Query: 465 ----LAIAK---------ETGRRLGMATNMYPSSSLLGRD-----------KD-ENEALP 499
AIAK ET + N+ P S + RD KD +E L
Sbjct: 595 PITAKAIAKGVGIISEGNETVEDIAARLNI-PVSQVNPRDAKACVVHGSDLKDMTSEQL- 652
Query: 500 VDELIEEADG--FAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADA 557
DE+++ FA P+ K IV+ Q + +V +TGDGVND+PALKKADIG+A+ A
Sbjct: 653 -DEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIA 711
Query: 558 -TDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGFVLLALIWEYDFPPFMVLI 616
+D ++ AAD++L + + I++ V R IF +K ++ + L + I E PF++ I
Sbjct: 712 GSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKK-SIAYTLTSNIPE--ITPFLIFI 768
Query: 617 IA 618
IA
Sbjct: 769 IA 770
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 6e-40
Identities = 115/363 (31%), Positives = 166/363 (45%), Gaps = 52/363 (14%)
Query: 372 SKGAPEQILNLCKE---KKEIAV--------KVHTIIDKFAER-GLRSLAVAIQEV---- 415
KGAPE +L C AV + ++I + LR LA+A +++
Sbjct: 449 VKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPR 508
Query: 416 SEMTKESPGGPW------TFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAK 469
E P TF G++ + DPPR + D I + G+ V MITGD A+
Sbjct: 509 EEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAE 568
Query: 470 ETGRRLGM--ATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE 527
RR+G+ S GR+ DE A F+ V P HK E+V++LQE
Sbjct: 569 AICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE 628
Query: 528 KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAI 587
+ +V MTGDGVNDAPALKKADIGIA+ T+ A+ A+D+VL + + I++AV RAI
Sbjct: 629 QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAI 688
Query: 588 FQRMKNY-------TLG-----FVLLALIWEYDFPPFMVLIIAILNDGTIMTI------S 629
+ MK + +G F+ AL P +L + ++ DG T
Sbjct: 689 YNNMKQFIRYMISSNIGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPD 748
Query: 630 KDRVKPSPR-PDSWKLNE-IFATGIVIGTYLALVTV--------LFYWVVVDTDFFETHF 679
KD + PR PD + +F +V+G Y+ L TV L ++ D D F T
Sbjct: 749 KDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCP 808
Query: 680 HVK 682
+
Sbjct: 809 DFE 811
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 154 bits (391), Expect = 2e-38
Identities = 152/697 (21%), Positives = 252/697 (36%), Gaps = 162/697 (23%)
Query: 73 MAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKL--GDIIPADARLLEGDPLKIDQASSA 130
M H V+R G+W + LVPGDI+SI +P D+ LL G + ++++
Sbjct: 224 MVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCI-VNESM-- 280
Query: 131 LTGESLPVTKKTADE------------------VFSG-------STCKHGEIEAVVIATG 165
LTGES+PV K + +F G A+V+ TG
Sbjct: 281 LTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTG 340
Query: 166 VHSFFGKAAH-LVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGI 224
+ G+ ++ V F + F +G I II + + +
Sbjct: 341 FSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKDGRPLGKIIL 400
Query: 225 NNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 284
+L ++ I +P A+P LS+ + RL ++G I +DV C DKTGTL
Sbjct: 401 RSLDIITIV-VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTL 459
Query: 285 TLNRL-----------------------TVDRNLIEVF---------NRN-----MDKDM 307
T + L + +DK M
Sbjct: 460 TEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKM 519
Query: 308 I-----VLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTA-ITY 361
L + + + D +I + F+ +R + I
Sbjct: 520 FEATGWTLEEDDESAEPTS-----ILAVVRTDDPPQELSI--IRRFQFSSALQRMSVIVS 572
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVA--------IQ 413
+ + + KGAPE I +LC + + ++ + G R LA+A +Q
Sbjct: 573 TNDERSPDAFVKGAPETIQSLCS-PETVPSDYQEVLKSYTREGYRVLALAYKELPKLTLQ 631
Query: 414 EVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQL----AIAK 469
+ ++++++ TF G + +P + D+ + I+ + MITGD +A+
Sbjct: 632 KAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVAR 691
Query: 470 ETG-----RRLGMATNMYPSSS----LLGRDKDEN------EALP--------------- 499
E G L +A P S + D +P
Sbjct: 692 ECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASR 751
Query: 500 --------------------VDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGV 539
+ L+ FA + P+ K +V++LQ+ + VGM GDG
Sbjct: 752 YHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGA 811
Query: 540 NDAPALKKADIGIAVADATDAARGAADIVLTEPGLS----VII---SAVLTSRAIFQRMK 592
ND ALK+AD+GI++++A A AA +S VI A++TS +F+ M
Sbjct: 812 NDCGALKQADVGISLSEAE--ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYM- 868
Query: 593 NYTLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTIS 629
L +LI Y + LI + L DG +TI
Sbjct: 869 ------ALYSLIQFYSV-SILYLIGSNLGDGQFLTID 898
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 141 bits (357), Expect = 2e-34
Identities = 90/299 (30%), Positives = 151/299 (50%), Gaps = 32/299 (10%)
Query: 23 AAAVMAIVLANGGGQGPDWQDFVG---IVCLLLINSTISFIEENNAGNAAAALMAHLAPK 79
AA ++ VLA FV I+ +L+ N+ + +E NA A AL + +
Sbjct: 15 LAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEH 74
Query: 80 TKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVT 139
KVLR+G+W A LVPGDI+ + +GD +PAD R+L L++DQ S LTGES+ V
Sbjct: 75 AKVLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQ--SILTGESVSVN 132
Query: 140 KKT-------------ADEVFSGSTCKHGEIEAVVIATGVHSFFGK-AAHLVDSTEVVGH 185
K T + +FSG+ G+ VV+ TG+ + GK + + +
Sbjct: 133 KHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTP 192
Query: 186 FQQVLTSIGNFCICSIAVGMILEIIVMFPIQH--------RSYRDGINNLLV---LLIGG 234
Q+ L G + S +G+I ++ + I H + I + L +
Sbjct: 193 LQKKLDEFGE--LLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIYYFKIAVALAVAA 250
Query: 235 IPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDR 293
IP +P V++ LA+G+ +++++ AI +++ ++E + V+CSDKTGTLT N+++V +
Sbjct: 251 IPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCK 309
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 1e-33
Identities = 144/584 (24%), Positives = 236/584 (40%), Gaps = 97/584 (16%)
Query: 15 NPLSWVMEAAAVMAIVL---ANGGGQGPDWQDFVGIVCLLLI------NSTISFIEENNA 65
NP+ +V+E +++ L + G + F + ++L N + E
Sbjct: 32 NPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGK 91
Query: 66 GNAAAALMAHLAPKTKVLRE-GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKI 124
A + ++LR G + A L GDI+ ++ G+IIP+D ++EG
Sbjct: 92 AQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEG----- 146
Query: 125 DQAS---SALTGESLPVTKKTA---DEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVD 178
AS SA+TGES PV +++ V G+ ++ + A +F + LV+
Sbjct: 147 -VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVE 205
Query: 179 STEVVGHFQQVLTSIGNFCICSIAVGMILEIIV--MFPIQHRSYRDGIN--NLLVLLIGG 234
E Q+ I I + +I + V ++P S + L+ LL+
Sbjct: 206 GAER----QKTPNEIALT-ILLSGLTLIFLLAVATLYPFAIYSGGGAASVTVLVALLVCL 260
Query: 235 IPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NRLTVDR 293
IP + +LS G R++Q I A+E +D L DKTGT+TL NR +
Sbjct: 261 IPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASE- 319
Query: 294 NLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVH----FLP 349
I V ++++ AA+ A L ++ +I+ LA ++ F+P
Sbjct: 320 -FIPV-PGVSEEELAD--AAQLASLADETPEGRSIVE-LAKKLGIELREDDLQSHAEFVP 374
Query: 350 FNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE-KKEIAVKVHTIIDKFAERGLRSL 408
F +T ++ +D G KGA + I +E I + +D+ + G L
Sbjct: 375 FT---AQTRMSGVDLPGG-REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPL 430
Query: 409 AVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQ---- 464
V G++ L D + + +G+ MITGD
Sbjct: 431 VVVENGR-------------ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTA 477
Query: 465 LAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKI 524
AIA E G VD+ I EA PE K +++
Sbjct: 478 AAIAAEAG---------------------------VDDFIAEAT------PEDKLALIRQ 504
Query: 525 LQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIV 568
Q + +V MTGDG NDAPAL +AD+G+A+ T AA+ AA++V
Sbjct: 505 EQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 548
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (309), Expect = 9e-29
Identities = 159/619 (25%), Positives = 234/619 (37%), Gaps = 165/619 (26%)
Query: 13 MW-NPLSWVMEAAAVMAIVL--ANGGGQGPDWQDFVGIVCLLLINSTISF--IEENNA-- 65
NP+ +V+E +++ +L A Q F + L L T+ F E A
Sbjct: 30 QIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLW-FTVLFANFAEALAEG 88
Query: 66 -GNAAAA--------LMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARL 116
G A A A K+ G +E A L GDI+ ++ G+IIPAD +
Sbjct: 89 RGKAQADSLRGAKKDTFAR-----KLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEV 143
Query: 117 LEGDPLKIDQAS---SALTGESLPVTKKTADEVFS---GSTCKHGEIEAVVIATGVHSFF 170
+EG AS SA+TGES PV +++ + S G+ I + A SF
Sbjct: 144 IEG------VASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFL 197
Query: 171 GKAAHLVDSTE--------VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRD 222
+ LV+ + + LT I +L + + P S
Sbjct: 198 DRMIALVEGAKRQKTPNEIALTILLAGLTII-----------FLLVVATLPPFAAYSGGA 246
Query: 223 -GINNLLVLLIGGIPIAMPTVLSVTLAIG---SHRLSQQGAITKRMTAIEEMAGMDVLCS 278
I L+ LL+ IP + +LS AIG R+ Q I A+E +D L
Sbjct: 247 LSITVLVALLVCLIPTTIGGLLS---AIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLL 303
Query: 279 DKTGTLTL-NRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADP-- 335
DKTGT+TL NR + L E + DAA ++ LAD
Sbjct: 304 DKTGTITLGNRQASE-----------------FLPVPGVTEE--ELADAAQLSSLADETP 344
Query: 336 ---------------KEARANIKEVHFLPFNPVDKRTAITY---IDSDGNWYRASKGAPE 377
+E F+PF +A T +D DG R KGA +
Sbjct: 345 EGRSIVVLAKQRFNLRERDLQSLHATFVPF------SAQTRMSGVDLDGREIR--KGAVD 396
Query: 378 QILNLCKEKK-EIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLF 436
I + ++ +D+ A +G L VA G++ L
Sbjct: 397 AIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVAEDNR-------------VLGVIYLK 443
Query: 437 D---PPRHDSVDTIRRALNLGVCVKMITGD-QL---AIAKETGRRLGMATNMYPSSSLLG 489
D P + +R+ +G+ MITGD L AIA E G
Sbjct: 444 DIVKPGIKERFAELRK---MGIKTVMITGDNPLTAAAIAAEAG----------------- 483
Query: 490 RDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD 549
VD+ + EA PE K +++ Q + +V MTGDG NDAPAL +AD
Sbjct: 484 ----------VDDFLAEAT------PEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQAD 527
Query: 550 IGIAVADATDAARGAADIV 568
+G+A+ T AA+ A ++V
Sbjct: 528 VGVAMNSGTQAAKEAGNMV 546
|
Length = 679 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 2e-27
Identities = 142/599 (23%), Positives = 257/599 (42%), Gaps = 93/599 (15%)
Query: 15 NPLSWVMEAAAVMAIVLANGGGQGPDWQDFVG-----------IVCLLLINSTISFIEEN 63
NP+ +V+E ++A+ L PD I+ L L+ + S
Sbjct: 32 NPIMFVVEVGMLLALGLT----IYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAE 87
Query: 64 NAGNAAAALMAHLAPKTKVLR---EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGD 120
G A A + + K R +G ++ DA+ L G I+ + G+ IP D ++++G
Sbjct: 88 GRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKG- 146
Query: 121 PLKIDQASSALTGESLPVTKKTA---DEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLV 177
+D+ SA+TGES PV K++ D V G++ +E + + HSF K LV
Sbjct: 147 LATVDE--SAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLV 204
Query: 178 DSTEVVGHFQQVLTSIGNFCIC-SIAVGMILEIIVMFPI-QHRSYRDGINNLLVLLIGGI 235
+ ++ I F + ++ + ++ I+ M+P+ + ++ I L+ L + I
Sbjct: 205 EGATR----KKTPNEIALFTLLMTLTIIFLVVILTMYPLAKFLNFNLSIAMLIALAVCLI 260
Query: 236 PIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NRLTVDRN 294
P + +LS G R++Q + K ++E ++VL DKTGT+T NR+
Sbjct: 261 PTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADA-- 318
Query: 295 LIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVD 354
I V + + ++ ++ AA + + + D + I LA + + ++PF
Sbjct: 319 FIPVKSSSFER---LVKAAYESSIAD-DTPEGRSIVKLAYKQHIDLPQEVGEYIPFTAET 374
Query: 355 KRTAITYIDSDGNWYRASKGAPEQILNLCKEKK-EIAVKVHTIIDKFAERGLRSLAVAIQ 413
+ + + + + KGAP ++ KE I V + ++ +++G L V
Sbjct: 375 RMSGVKFTTRE-----VYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVLED 429
Query: 414 EVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGD-QLA---IAK 469
G++ L D + V+ R +G+ M TGD +L IAK
Sbjct: 430 NE-------------ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAK 476
Query: 470 ETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKK 529
E G VD + E PE K +++ Q K
Sbjct: 477 EAG---------------------------VDRFVAECK------PEDKINVIREEQAKG 503
Query: 530 HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIF 588
H+V MTGDG NDAPAL +A++G+A+ T +A+ AA+++ + + ++ VL + +
Sbjct: 504 HIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLL 562
|
Length = 673 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 118 bits (297), Expect = 4e-27
Identities = 87/340 (25%), Positives = 147/340 (43%), Gaps = 47/340 (13%)
Query: 296 IEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDK 355
I VF + D L N++ + + + K A + + PF+ K
Sbjct: 482 IHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQH---NEKPGSAQFEFIAEFPFDSEIK 538
Query: 356 RTAITYIDSDGNWYRA-SKGAPEQILNLCKEKK-EIAVKVHTIID-----------KFAE 402
R A Y D+ G Y +KGA E+I+ C + VK+ + D A
Sbjct: 539 RMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA 598
Query: 403 RGLRSLAVAIQEVSE------------MTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRA 450
GLR LA A + + + + + F GL+ ++DPPR++S + +
Sbjct: 599 EGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKC 658
Query: 451 LNLGVCVKMITGDQLAIAKETGRRLG-MATNMY------------PSSSLLGRDKDENEA 497
G+ V M+TGD AK + +G + N S +E +
Sbjct: 659 HQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDD 718
Query: 498 LPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-D 556
L L+ A P+ K ++++ L +K MTGDGVND+P+LK A++GIA+ +
Sbjct: 719 LKALCLV-----IARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGIN 773
Query: 557 ATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTL 596
+D A+ A+DIVL++ + I++A+ R +F + + L
Sbjct: 774 GSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVL 813
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 3e-26
Identities = 140/582 (24%), Positives = 236/582 (40%), Gaps = 86/582 (14%)
Query: 11 SFMWNPLSWVMEAAAVMAIVL----ANGGGQGPDWQDFVGIVCLLLINSTI--SFIEENN 64
+ NP+ +++ +++ + A+ G G + F I+ +L + + +F E
Sbjct: 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVA 87
Query: 65 AGNAAAALMAHLAPKTKVL-----REGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEG 119
G A + K +G + A L GDI+ ++ GD+IP D ++EG
Sbjct: 88 EGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEG 147
Query: 120 DPLKIDQASSALTGESLPVTKKTADEVFS---GSTCKHGEIEAVVIATGVHSFFGKAAHL 176
+D+ SA+TGES PV K++ + S G+ + A +F + L
Sbjct: 148 VA-SVDE--SAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIAL 204
Query: 177 VDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDG----INNLLVLLI 232
V+ + ++ +I + ++ + +L ++P + G + L+ LL+
Sbjct: 205 VEGAQRRKTPNEIALTI---LLIALTLVFLLVTATLWPF---AAYGGNAISVTVLVALLV 258
Query: 233 GGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTL-NRLTV 291
IP + +LS G R+ I A+E +D L DKTGT+TL NRL
Sbjct: 259 CLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLAS 318
Query: 292 DRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFN 351
+ I + + AA+ A L + D + I +LA R + + F
Sbjct: 319 E--FIPAQGVDEKT---LADAAQLASLAD-DTPEGKSIVILAKQLGIREDDVQSLHATFV 372
Query: 352 PVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKK-EIAVKVHTIIDKFAERGLRSLAV 410
+T ++ I+ D N KGA + I + I + +D+ A +G L V
Sbjct: 373 EFTAQTRMSGINLD-NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVV 431
Query: 411 AIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQ----LA 466
G++ L D + + + +G+ MITGD A
Sbjct: 432 CEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAA 478
Query: 467 IAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQ 526
IA E G VD+ I EA PE K +++ Q
Sbjct: 479 IAAEAG---------------------------VDDFIAEAT------PEDKIALIRQEQ 505
Query: 527 EKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIV 568
+ +V MTGDG NDAPAL +AD+G+A+ T AA+ AA++V
Sbjct: 506 AEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMV 547
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 3e-25
Identities = 89/315 (28%), Positives = 137/315 (43%), Gaps = 64/315 (20%)
Query: 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPG 99
DW + I ++ +N I FI+E A +L +P V+R G+ D+ LVPG
Sbjct: 80 DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPG 139
Query: 100 DIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT------------ADEV- 146
DI +K GD IPAD RL+E D+ + LTGESLPV K D +
Sbjct: 140 DICLLKTGDTIPADLRLIETKNFDTDE--ALLTGESLPVIKDAHATFGKEEDTPIGDRIN 197
Query: 147 --FSGSTCKHGEIEAVVIATGVHSFFGKAA---------------------------HLV 177
FS S G + + IAT ++S G A L
Sbjct: 198 LAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILK 257
Query: 178 DSTEVVGHF---------QQVLTSIGNFCICSIAVGMILEIIVM----FPIQHRSYRDGI 224
+ +V G F + L+ + C + +I IIVM F + I
Sbjct: 258 VTKKVTGAFLGLNVGTPLHRKLSKLAVILFC---IAIIFAIIVMAAHKFDVDKEVAIYAI 314
Query: 225 NNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTL 284
L I IP ++ VLS+T+A+G+ +S++ I +++ A+E + ++ +CSDKTGT+
Sbjct: 315 C----LAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTI 370
Query: 285 TLNRLTVDRNLIEVF 299
T ++ + I F
Sbjct: 371 TQGKMIARQIWIPRF 385
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 1e-24
Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 13/250 (5%)
Query: 50 LLLINSTISFIEENNAGNAAAALMA--HLAPKTKVLREGQWKEQ-DAAVLVPGDIISIKL 106
LLL+ S +EE +G A AL A LAP T + G E+ L GD++ +K
Sbjct: 24 LLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKP 83
Query: 107 GDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGV 166
G+ +P D +L G +D+ SALTGES+PV K DEVF+G+ G + VV
Sbjct: 84 GERVPVDGVVLSGTST-VDE--SALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPA 140
Query: 167 HSFFGKAAHLV-DSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGIN 225
S K +LV ++ Q+ + + + + +V ++ + +
Sbjct: 141 DSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--RWPFWVY 198
Query: 226 NLLVLLIGGIPIAMPTVLSVTLAI--GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGT 283
LVLL+ P A+ V+S A ++ G + K A+E +A + + DKTGT
Sbjct: 199 RALVLLVVASPCAL--VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGT 256
Query: 284 LTLNRLTVDR 293
LT R V
Sbjct: 257 LTTGRPKVVD 266
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 96.7 bits (241), Expect = 2e-20
Identities = 64/177 (36%), Positives = 84/177 (47%), Gaps = 38/177 (21%)
Query: 432 LLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQL----AIAKETGRRLGMATNMYPSSSL 487
LL + DP R DSV ++R G + M+TGD AIAKE G
Sbjct: 644 LLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAG--------------- 688
Query: 488 LGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK 547
+DE+I AGV P+ K E +K LQ + V M GDG+NDAPAL +
Sbjct: 689 ------------IDEVI------AGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQ 730
Query: 548 ADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLG-FVLLAL 603
AD+GIA+ +D A A I L L + A+ SRA + MK LG F+ +L
Sbjct: 731 ADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSL 787
|
Length = 834 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 94.7 bits (236), Expect = 5e-20
Identities = 63/180 (35%), Positives = 88/180 (48%), Gaps = 35/180 (19%)
Query: 428 TFCGLLPLFDPPRHDSVDTIRRALNLGVC-VKMITGDQLAIAKETGRRLGMATNMYPSSS 486
T+ G + L D PR D+ + I LG+ V M+TGD+ A+A+ R LG
Sbjct: 352 TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG---------- 401
Query: 487 LLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALK 546
+DE+ A + PE K EIVK L+EK V M GDG+NDAPAL
Sbjct: 402 -------------IDEV------HAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALA 442
Query: 547 KADIGIAV-ADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGFVLLALIW 605
AD+GIA+ A +D A AD+VL LS + A+ + +R + V++AL
Sbjct: 443 AADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAI----RLARRTRRIVKQNVVIALGI 498
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 8e-14
Identities = 78/234 (33%), Positives = 117/234 (50%), Gaps = 40/234 (17%)
Query: 71 ALMAHLAPKTKV-LREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQAS- 128
ALMA L P+T LR+G+ +E A L PGD+I + G +PAD +LL AS
Sbjct: 236 ALMA-LVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPF------ASF 288
Query: 129 --SALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE----- 181
SALTGES+PV + T ++V +G+T + V++ S + HL++ E
Sbjct: 289 DESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAP 348
Query: 182 ---VVGHFQQVLTSIGNFCICSIAVGMILEIIV---MF--PIQHRSYRDGINNLLVLLIG 233
+ F ++ T I + +L I+V +F P Q YR L +LLI
Sbjct: 349 IERFIDRFSRIYTPA-------IMLVALLVILVPPLLFAAPWQEWIYR----GLTLLLI- 396
Query: 234 GIPIAMPTVLSVTLAIGS--HRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 285
G P A+ V+S AI S +++GA+ K A+E++ + + DKTGTLT
Sbjct: 397 GCPCAL--VISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLT 448
|
Length = 741 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 6e-13
Identities = 50/159 (31%), Positives = 64/159 (40%), Gaps = 31/159 (19%)
Query: 428 TFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSL 487
GL+ L D R D+ I LG+ M+TGD A LG+
Sbjct: 558 DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI---------- 607
Query: 488 LGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK 547
D AG+ PE K + V L + + M GDG+NDAPA+K
Sbjct: 608 --------------------DFRAGLLPEDKVKAVTELN-QHAPLAMVGDGINDAPAMKA 646
Query: 548 ADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRA 586
A IGIA+ TD A AD LT L + + SRA
Sbjct: 647 ASIGIAMGSGTDVALETADAALTHNRLRGLAQMIELSRA 685
|
Length = 741 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 6e-07
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 322 DAIDAAIIN----MLADPKEARANIKEVHFLPFNPVDKR-TAITYIDSDGNWYRASKGAP 376
D ++A++ + D +E RA V +PFN KR + + ++ D + KGAP
Sbjct: 22 DPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAP 81
Query: 377 EQILNLCK 384
E+IL C
Sbjct: 82 ERILERCS 89
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 1e-06
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 504 IEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---ADATDA 560
I FAG PE K +I++ L+++ V M G+G ND AL++AD+GI +
Sbjct: 68 IPVERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPER 127
Query: 561 ARGAADIVLTEPGLSVIISA 580
AD+VL E + +
Sbjct: 128 LLLTADVVLKEIAEILDLLK 147
|
Length = 152 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 2e-06
Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 18/119 (15%)
Query: 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGR 490
GL+ L DP + + ++ G+ + ++TGD A R LG+ + +
Sbjct: 87 GLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSA----DL 142
Query: 491 DKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD 549
P ++ E A ++ L K V M GDGVND PA K A
Sbjct: 143 YGLVGVGKPDPKIFELA--------------LEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 47.8 bits (114), Expect = 2e-05
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 26/223 (11%)
Query: 76 LAPKT-KVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGE 134
L P T +V+ + K A + PG ++ + GD +P D + +G+ +D+A LTGE
Sbjct: 320 LTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAW-LDEA--MLTGE 376
Query: 135 SLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLV----DSTEVVGHFQQVL 190
+P K D V +G+ + G + A G H+ + +V S +G +
Sbjct: 377 PIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKI 436
Query: 191 TSIGNFCICSIAVGMILEIIVMF--PIQHRSYRDGINNLLVLLIGGIPIAMP------TV 242
+++ F + + ++ I F P Y LV+ + IA P T
Sbjct: 437 SAV--FVPVVVVIALVSAAIWYFFGPAPQIVYT------LVIATTVLIIACPCALGLATP 488
Query: 243 LSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLT 285
+S+ +G R ++ G + + A++ + +D L DKTGTLT
Sbjct: 489 MSIISGVG--RAAEFGVLVRDADALQRASTLDTLVFDKTGTLT 529
|
Length = 834 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 9e-05
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 13/90 (14%)
Query: 501 DELIEEADGFAG------VFPEHKYEIVKILQEK-----KHVVGMTGDGVNDAPALKKAD 549
+ L E G V +K + + IL K ++ V GDG ND +K A
Sbjct: 130 NRLEVEDGKLTGLVEGPIVDASYKGKTLLILLRKEGISPENTV-AVGDGANDLSMIKAAG 188
Query: 550 IGIAVADATDAARGAADIVLTEPGLSVIIS 579
+GIA +A + ADI + + L+ I+
Sbjct: 189 LGIAF-NAKPKLQQKADICINKKDLTDILP 217
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|234910 PRK01158, PRK01158, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 5e-04
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 536 GDGVNDAPALKKADIGIAVADATDAARGAADIVLTEP 572
GD ND + A G+AVA+A + + AAD V +
Sbjct: 180 GDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKS 216
|
Length = 230 |
| >gnl|CDD|213628 TIGR01487, Pglycolate_arch, phosphoglycolate phosphatase, TA0175-type | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 35/109 (32%), Positives = 48/109 (44%), Gaps = 18/109 (16%)
Query: 479 TNMYPSSSL--LGRDKDENEALPVDELIEE------ADGFAGVF---PEHKYEIVKILQE 527
+N YP +SL + KD +E V E+I+E A GFA K V+ L+E
Sbjct: 101 SNEYPRASLVIMREGKDVDE---VREIIKERGLNLVASGFAIHIMKKGVDKGVGVEKLKE 157
Query: 528 ----KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEP 572
K V GD ND + +AVA+A D + AD V + P
Sbjct: 158 LLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANADDQLKEIADYVTSNP 206
|
This group of Archaeal sequences, now known to be phosphoglycolate phosphatases, is most closely related to the sucrose-phosphate phosphatases from plants and cyanobacteria (TIGR01485). Together, these two models comprise a subfamily model (TIGR01482). TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Length = 215 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 37.6 bits (88), Expect = 0.002
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVL 31
+ + L+FL NPL +++ AAAV++ +L
Sbjct: 46 KTSPLLRFLRQFHNPLIYILLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 883 | |||
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.94 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.63 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.07 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.05 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.98 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.94 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.85 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.83 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.82 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 98.81 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.81 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.8 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.79 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.77 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.75 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.73 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 98.72 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.66 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.64 | |
| PLN02887 | 580 | hydrolase family protein | 98.63 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.62 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.6 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.59 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.52 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.52 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.47 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.43 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.38 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.37 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.34 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.31 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.29 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.28 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.24 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.13 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.13 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.1 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.04 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.99 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.83 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.83 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.75 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.74 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.63 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.62 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 97.51 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.47 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 97.41 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.41 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.37 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.33 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.23 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.14 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.07 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.04 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.01 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.97 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 96.93 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.92 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.83 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.8 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.77 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.74 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.74 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.66 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.66 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.59 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.54 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.48 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.46 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.29 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.26 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.19 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.19 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.07 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.0 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.94 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 95.93 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.75 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.73 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.69 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.68 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.66 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 95.57 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.53 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 95.49 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.46 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 95.45 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.43 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 95.29 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 95.1 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 95.02 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.8 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.74 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 94.7 | |
| PLN02940 | 382 | riboflavin kinase | 94.67 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.41 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 94.24 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.15 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.0 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.73 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 93.71 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.61 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 93.56 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 93.41 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 93.37 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 93.32 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 93.13 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.07 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 92.83 | |
| PLN02811 | 220 | hydrolase | 92.31 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 91.94 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 91.64 | |
| PLN03017 | 366 | trehalose-phosphatase | 91.37 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 91.27 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 90.82 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 90.77 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 90.08 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.22 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 88.64 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 88.34 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 87.54 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 86.8 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 85.86 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 84.61 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 83.5 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 83.25 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 82.75 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 82.58 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 81.13 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 80.63 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 80.51 |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-190 Score=1544.48 Aligned_cols=873 Identities=81% Similarity=1.249 Sum_probs=854.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
|+|.+++|+.+||||++|+|++||++++.+.+++|.++||.||++|++++++|+.++|+||++|+++.++|++.++++++
T Consensus 58 ken~~lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~Kak 137 (942)
T KOG0205|consen 58 KESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAK 137 (942)
T ss_pred hhhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccE
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEE
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVV 161 (883)
Q Consensus 82 V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V 161 (883)
|+|||+|.++++++||||||+.++.||+||||+||++|+.|+||| |+|||||+||+|++||.+||||+|++|++.++|
T Consensus 138 VlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD~LkiDQ--SAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVV 215 (942)
T KOG0205|consen 138 VLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGDPLKIDQ--SALTGESLPVTKHPGDEVFSGSTCKQGEIEAVV 215 (942)
T ss_pred EeecCeeeeeeccccccCceeeeccCCEecCccceecCCccccch--hhhcCCccccccCCCCceecccccccceEEEEE
Confidence 999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred EEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhH
Q 002768 162 IATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241 (883)
Q Consensus 162 ~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~ 241 (883)
++||.+|++||.+++++.+.+.+|||++++.|+++|++++++++++.+.++|+.+++.++..+.+.+++++++||+|||.
T Consensus 216 iATg~~TF~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R~~r~~i~nLlvllIGgiPiamPt 295 (942)
T KOG0205|consen 216 IATGVHTFFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVMYPIQHRLYRDGIDNLLVLLIGGIPIAMPT 295 (942)
T ss_pred EEeccceeehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhheheeeecccccccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccC
Q 002768 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQ 321 (883)
Q Consensus 242 ~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~ 321 (883)
++++++++|+.+|+++|+++|+++|+|+|+.+|++|+|||||||.||++|++..++.+.++.++|++++.|+++++.+++
T Consensus 296 VlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~ 375 (942)
T KOG0205|consen 296 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQ 375 (942)
T ss_pred eeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcCh
Confidence 99999999999999999999999999999999999999999999999999998877888999999999999999999999
Q ss_pred ChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHH
Q 002768 322 DAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFA 401 (883)
Q Consensus 322 ~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a 401 (883)
|++|.|++.++.||++++.+|+++++.||||.+||.+.++.++||++++++||||+.|++.|+.+.++++++++.+++|+
T Consensus 376 DAID~A~v~~L~dPKeara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~A 455 (942)
T KOG0205|consen 376 DAIDAAIVGMLADPKEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFA 455 (942)
T ss_pred hhHHHHHHHhhcCHHHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCC
Q 002768 402 ERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481 (883)
Q Consensus 402 ~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~ 481 (883)
++|+|.|+||++..++..++..+.+|+|+|+..+.||||+|+.++|++....|++|+|+|||+..+++++++++|+.+|+
T Consensus 456 eRGlRSLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnm 535 (942)
T KOG0205|consen 456 ERGLRSLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNM 535 (942)
T ss_pred HhcchhhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCCCC-CCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHH
Q 002768 482 YPSSSLLGRDKDE-NEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDA 560 (883)
Q Consensus 482 ~~~~~l~g~~~~~-~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ 560 (883)
|++..+.|.+.++ +...++++++++++.||.++||||+++|+.||++||.|+|+|||+||+||||+||+|||+.++||+
T Consensus 536 ypss~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atda 615 (942)
T KOG0205|consen 536 YPSSALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDA 615 (942)
T ss_pred CCchhhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhh
Confidence 9999999988655 488899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHhhcCCCChHHHHHHHHHhhhhhcccc
Q 002768 561 ARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-----------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTIS 629 (883)
Q Consensus 561 ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~-----------~~~~~~~~~~~~~~~~~~il~i~~~~d~~~~~l~ 629 (883)
||.+|||||++|++|.|+.++..+|.+|+||++|+ ++|++++++|.|.|+|++++++++++|++.|+++
T Consensus 616 ar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~alIw~~df~pfmvliiailnd~t~mtis 695 (942)
T KOG0205|consen 616 ARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWEFDFSPFMVLIIAILNDGTIMTIS 695 (942)
T ss_pred hcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhcCCceEEEE
Confidence 99999999999999999999999999999999987 5678888999999999999999999999999999
Q ss_pred cCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Q 002768 630 KDRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709 (883)
Q Consensus 630 ~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 709 (883)
+|+++|+|.|++|+++++|..++++|.|+++++..+||..+.+.||+..||++...++..+...++|+++++++|+++|+
T Consensus 696 ~d~v~psp~pdswkl~~ifatgvVlgtyma~~tvif~w~~~~t~ff~~~f~v~~~~~~~~~~~~a~ylqvsi~sqaliFv 775 (942)
T KOG0205|consen 696 KDRVKPSPTPDSWKLKEIFATGVVLGTYMAIMTVIFFWAAYTTDFFPRTFGVRSLFGNEHELMSALYLQVSIISQALIFV 775 (942)
T ss_pred cccCCCCCCCcccchhhhheeeeEehhHHHHHHHHHhhhhccccccccccceeeccCCHHHHHHhhhhhheehhceeeEE
Confidence 99999999999999999999999999999999999999999999999999999988888899999999999999999999
Q ss_pred HhcCCCccccchhHHHHHHHHHHHHHHHHHHHhhcccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhh
Q 002768 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGEAWN 789 (883)
Q Consensus 710 ~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 789 (883)
+|+++|+|.++|+++++.+++.++++++++++|.+|.|....+++|.|..++|+++++.++++++.|+..||.++|++|.
T Consensus 776 trsr~w~~~erpg~~L~~af~~aqliatliavya~w~~a~i~~igw~w~gviw~ysi~~y~~ld~~kf~~~y~lsg~a~~ 855 (942)
T KOG0205|consen 776 TRSRSWSFVERPGWLLLIAFFAAQLIATLIAVYANWSFARITGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALSGKAWD 855 (942)
T ss_pred EeccCCccccCcHHHHHHHHHHHHHHHHHHHHHheecccceecceeeeeeeEEEEEEEEEEechhhheehhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccccccccCCCCchhhhhhHhhhhhccccccCCCcccCCCCCCcchhHHHHHhhhhHHhhhhhccccchhhhhhhc
Q 002768 790 LVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQGLIGTDLEFNGRKSRPSLIAEQARRRAEIARLGEIHTLRGHVESVVRL 869 (883)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 869 (883)
+.+++|.++++|++|++.+++++||.+||++||.++++ +.|++++++++|||+|++|||+.|+||||+||++|+
T Consensus 856 ~~~~~k~~~~~kk~~~~~~~~a~~~~~qrt~~~lq~~~------~~~~~~~a~~~~~~ae~~r~~e~~~l~g~vesv~kl 929 (942)
T KOG0205|consen 856 RLIENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPE------GRELSEIAEEAKRRAEIARLRELHTLKGHVESVVKL 929 (942)
T ss_pred HHhcCcchhhhccccchhhhhhHHHHhhhhhcccCCCc------cchhhHHHHHHhhhhhhhhccchhhhhhhhHhhhhh
Confidence 99999999999999999999999999999999999884 259999999999999999999999999999999999
Q ss_pred cCCChhhhhhcccC
Q 002768 870 KNLDLNVIQAAHTV 883 (883)
Q Consensus 870 ~~~~~~~~~~~~~~ 883 (883)
||+|++++ |||||
T Consensus 930 k~~d~~~~-~~~t~ 942 (942)
T KOG0205|consen 930 KGLDIETI-QHYTV 942 (942)
T ss_pred cccchhhh-hhccC
Confidence 99999999 99997
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-135 Score=1146.56 Aligned_cols=769 Identities=29% Similarity=0.435 Sum_probs=622.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
+|.|+++|+||.||++.+|+++|++||++. .|.|++.|.+++++|.+++++||||++|++++|+++.||.|+|
T Consensus 47 ~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~-------~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V 119 (972)
T KOG0202|consen 47 ESLWKLVLEQFDNPLILILLLSAAISFVLA-------DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHV 119 (972)
T ss_pred CcHHHHHHHHHHhHHHHHHHHHHHHHHHHH-------hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceE
Confidence 689999999999999999999999999994 8889999999999999999999999999999999999999999
Q ss_pred EECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccC--------------CCeeee
Q 002768 83 LREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT--------------ADEVFS 148 (883)
Q Consensus 83 ~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~--------------g~~v~a 148 (883)
+|+|+.+.+++.||||||||.|+-||+||||.||+|..++.||| |.|||||.||.|.. .+++|+
T Consensus 120 ~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDe--S~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFs 197 (972)
T KOG0202|consen 120 LRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKSLRIDE--SSLTGESEPVSKDTDAVPKDENADVQDKKNIAFS 197 (972)
T ss_pred EecCcccceehhccCCCCEEEEecCCccccceeEEeeeeeeeec--ccccCCcccccccCccccCCCCCccccceeeEee
Confidence 99999999999999999999999999999999999999999999 99999999999954 257999
Q ss_pred eeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHH-HHHHHHHH-hHhhc---c-c---C
Q 002768 149 GSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIA-VGMILEII-VMFPI---Q-H---R 218 (883)
Q Consensus 149 Gs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~-i~~~~~~~-~~~~~---~-~---~ 218 (883)
||.|..|.++|+|+.||.+|++|++.+.++++ +.++|+|+.++.+++.+.-.+. +++.+..+ +.|+. . + +
T Consensus 198 GT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk 277 (972)
T KOG0202|consen 198 GTLVVAGRAKGIVIGTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFK 277 (972)
T ss_pred cceeecCceeEEEEeccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchh
Confidence 99999999999999999999999999999988 6699999999999988652222 22221111 12211 1 2 2
Q ss_pred chHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe
Q 002768 219 SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV 298 (883)
Q Consensus 219 ~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~ 298 (883)
.+.+-+..++++.+++||+|||.++++++++|.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++++..
T Consensus 278 ~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~ 357 (972)
T KOG0202|consen 278 GALYYFKIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPD 357 (972)
T ss_pred chhhhhhHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecc
Confidence 33445666789999999999999999999999999999999999999999999999999999999999999999987531
Q ss_pred cc-----------CCCC------------------hH---HHHHHHHHHhcc--c---------cCChHHHHHHHHhC--
Q 002768 299 FN-----------RNMD------------------KD---MIVLLAARAARL--E---------NQDAIDAAIINMLA-- 333 (883)
Q Consensus 299 ~~-----------~~~~------------------~~---~~l~~a~~~~~~--~---------~~~~~~~ai~~~~~-- 333 (883)
.. .+++ .+ +++..++.|... . .++|.|.|+...+.
T Consensus 358 ~~~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm 437 (972)
T KOG0202|consen 358 GGTATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKM 437 (972)
T ss_pred cccccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHc
Confidence 10 0011 11 233444444321 1 34688888765431
Q ss_pred ---ChH---H-----------HhhcccEeEeecCCCCCceEEEEEEcCCCc--EEEEEcCcHHHHHhhhhc---------
Q 002768 334 ---DPK---E-----------ARANIKEVHFLPFNPVDKRTAITYIDSDGN--WYRASKGAPEQILNLCKE--------- 385 (883)
Q Consensus 334 ---~~~---~-----------~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~--~~~~~KGa~e~il~~c~~--------- 385 (883)
+.. . ....++....+||++++|+|++.+.+..|+ +..|+|||+|.|+++|+.
T Consensus 438 ~l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~ 517 (972)
T KOG0202|consen 438 GLPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTK 517 (972)
T ss_pred CCCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCcee
Confidence 111 0 112234558999999999999999876554 688999999999999953
Q ss_pred ---cHHHHHHHHHHHHHHHhcCCeEeEEeeecccc-----------cccCCCCCCceEEeecCCCCCCCccHHHHHHHHH
Q 002768 386 ---KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE-----------MTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRAL 451 (883)
Q Consensus 386 ---~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~-----------~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~ 451 (883)
.+..++.+.+...+|+++|+|+|++|+++.+. ..+...|.+|+|+|++++.||||++++++|+.|+
T Consensus 518 ~pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~ 597 (972)
T KOG0202|consen 518 VPLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCR 597 (972)
T ss_pred eeCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHH
Confidence 24568889999999999999999999997663 1234568999999999999999999999999999
Q ss_pred hCCCeEEEEccCcHHHHHHHHHHcCCCCCC--CCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcC
Q 002768 452 NLGVCVKMITGDQLAIAKETGRRLGMATNM--YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKK 529 (883)
Q Consensus 452 ~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g 529 (883)
++||+|+|||||+.+||++||+++|+..+. ....+++|+++|+++++++++.+.+..+|||++|+||.+||++||++|
T Consensus 598 ~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~g 677 (972)
T KOG0202|consen 598 QAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRG 677 (972)
T ss_pred HcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcC
Confidence 999999999999999999999999997643 356799999999999999999999999999999999999999999999
Q ss_pred CEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH------------H
Q 002768 530 HVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT------------L 596 (883)
Q Consensus 530 ~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~------------~ 596 (883)
++|+|||||+|||||||+|||||||| +|||+||+|||+||.||||++|+.||++||.+|+|||+|+ +
T Consensus 678 eivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~ 757 (972)
T KOG0202|consen 678 EVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVL 757 (972)
T ss_pred CEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999999999 9999999999999999999999999999999999999998 2
Q ss_pred HHHHHHHhhcCCCChHHHHHHHHHhhhhh-cccccCCCCC------CCCCCc-cchHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 597 GFVLLALIWEYDFPPFMVLIIAILNDGTI-MTISKDRVKP------SPRPDS-WKLNEIFATGIVIGTYLALVTVLFYWV 668 (883)
Q Consensus 597 ~~~~~~~~~~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~------~~~p~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~ 668 (883)
.++..++.++.+++|+|+||+|+++|++| ++++++++.+ |+.++. .....+|.+.+.+|.|+.+.++..|++
T Consensus 758 I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~ 837 (972)
T KOG0202|consen 758 IFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVW 837 (972)
T ss_pred HHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhH
Confidence 23334455678899999999999999997 8999988743 222222 234578888899999999999866655
Q ss_pred HHhccccccccccccC----------CCChHH-----HHHHHHHHHHHHHHHH-HHHHhcCCCccccch---hHHHHHHH
Q 002768 669 VVDTDFFETHFHVKSL----------SSNSEE-----VSSALYLQVSIISQAL-IFVTRSQSWSFLERP---GALLMCAF 729 (883)
Q Consensus 669 ~~~~~~~~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~~~---~~~l~~~~ 729 (883)
-+... +.+.+.+.. .++... ...+|.+++.++..++ .+++|+...+.+..| |.|+++++
T Consensus 838 ~~~~~--~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai 915 (972)
T KOG0202|consen 838 WMYGA--DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAI 915 (972)
T ss_pred HHhcC--CCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHH
Confidence 43211 111111100 000000 1224455555555543 577888766654432 56777777
Q ss_pred HHHHHHHHHHHHhhc--ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 730 VVAQLVATLIAVYAH--ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 730 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
.++.+.. +..+|.+ -..++..+++|.-|++++.+++.+++++|++|++.|+..
T Consensus 916 ~~S~~~~-f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 916 ALSFVLH-FLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred HHHHHhh-heEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 7654443 3334433 223467888888888889999999999999999998765
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-128 Score=1166.12 Aligned_cols=717 Identities=58% Similarity=0.918 Sum_probs=629.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
+++.|+.|+++|++|++|+|++++++++++ ++|.++++|++++++|..++++||+++++++++|+++.+++++
T Consensus 23 ~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~-------~~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~ 95 (755)
T TIGR01647 23 KVSPLLKFLGFFWNPLSWVMEAAAIIAIAL-------ENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKAR 95 (755)
T ss_pred CCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------cchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 457899999999999999999999999998 4899999999999999999999999999999999999999999
Q ss_pred EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEE
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVV 161 (883)
Q Consensus 82 V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V 161 (883)
|+|||++++|+++||||||+|.+++||+|||||+|++|+++.||| |+|||||.||.|++||.+|+||.|.+|+++++|
T Consensus 96 V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDe--S~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V 173 (755)
T TIGR01647 96 VLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQ--AALTGESLPVTKKTGDIAYSGSTVKQGEAEAVV 173 (755)
T ss_pred EEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCceEEEc--ccccCCccceEeccCCeeeccCEEEccEEEEEE
Confidence 999999999999999999999999999999999999999889999 999999999999999999999999999999999
Q ss_pred EEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhh
Q 002768 162 IATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMP 240 (883)
Q Consensus 162 ~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp 240 (883)
++||.+|++|||+++++++ ..++|+|+.+++++++++..+++.+++.+++.+...+.+|.+++..++++++++|||+||
T Consensus 174 ~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~vlv~a~P~~Lp 253 (755)
T TIGR01647 174 TATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGRGESFREGLQFALVLLVGGIPIAMP 253 (755)
T ss_pred EEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCcchH
Confidence 9999999999999999887 467899999999998876554444433333333324678888999999999999999999
Q ss_pred HHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhcccc
Q 002768 241 TVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLEN 320 (883)
Q Consensus 241 ~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~ 320 (883)
++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++. ...+.+.++++.+++.++...+
T Consensus 254 ~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~--~~~~~~~~~~l~~a~~~~~~~~ 331 (755)
T TIGR01647 254 AVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILP--FFNGFDKDDVLLYAALASREED 331 (755)
T ss_pred HHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEe--cCCCCCHHHHHHHHHHhCCCCC
Confidence 99999999999999999999999999999999999999999999999999998752 2223667788888887765667
Q ss_pred CChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceEEEEEEcC-CCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHH
Q 002768 321 QDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDS-DGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDK 399 (883)
Q Consensus 321 ~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~ 399 (883)
+||+|.|+++++.+....+..++.++++||+|.+|+|++++.+. +|+.+.++||+||.++++|++..+.++++++.+++
T Consensus 332 ~~pi~~Ai~~~~~~~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~ 411 (755)
T TIGR01647 332 QDAIDTAVLGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDE 411 (755)
T ss_pred CChHHHHHHHHHHHhHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHH
Confidence 79999999998766554556788899999999999999988765 37788899999999999998777777888899999
Q ss_pred HHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC
Q 002768 400 FAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT 479 (883)
Q Consensus 400 ~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 479 (883)
++++|+|++++|+++ .|++|+|+|+++++||||||++++|++||++||+|+|+||||+.||+++|+++||..
T Consensus 412 ~~~~G~rvl~vA~~~--------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~ 483 (755)
T TIGR01647 412 LASRGYRALGVARTD--------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGT 483 (755)
T ss_pred HHhCCCEEEEEEEEc--------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 999999999999973 367899999999999999999999999999999999999999999999999999975
Q ss_pred CCCC-CCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEecccc
Q 002768 480 NMYP-SSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADAT 558 (883)
Q Consensus 480 ~~~~-~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gt 558 (883)
+.+. .....|.+.+.++++++++.+++.++|||++||||+++|+.||++||+|+|||||+||+||||+|||||||++||
T Consensus 484 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gt 563 (755)
T TIGR01647 484 NIYTADVLLKGDNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGAT 563 (755)
T ss_pred CCcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCc
Confidence 4332 223455566677888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH-------H---H-HHHHHHhhcCCCChHHHHHHHHHhhhhhcc
Q 002768 559 DAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-------L---G-FVLLALIWEYDFPPFMVLIIAILNDGTIMT 627 (883)
Q Consensus 559 d~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~-------~---~-~~~~~~~~~~~~~~~~il~i~~~~d~~~~~ 627 (883)
|+||++||+||++|||++|++++++||++|+||+||+ + . +.+..+.++++++|+|++|+++++|++.++
T Consensus 564 dvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~~l~~~~il~~~l~~d~~~~~ 643 (755)
T TIGR01647 564 DAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNFYFPPIMVVIIAILNDGTIMT 643 (755)
T ss_pred HHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcchhHHHHHHHHHHHhHhHhh
Confidence 9999999999999999999999999999999999987 1 1 122223456779999999999999998899
Q ss_pred cccCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHH-H
Q 002768 628 ISKDRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQA-L 706 (883)
Q Consensus 628 l~~d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 706 (883)
+++|++.|+++|++|...+++..++++|++.++.++++|++.+...++...++.. .......+++|...+++|. .
T Consensus 644 l~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~t~~f~~~~~~~~~~ 719 (755)
T TIGR01647 644 IAYDNVKPSKLPQRWNLREVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQ----LLHGNLQSLIYLQVSISGQAT 719 (755)
T ss_pred ccCCCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhccccc----ccHhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998887776422221111110 1122345666666677776 4
Q ss_pred HHHHhcCCCccccchhHHHHHHHHHHHHHHHHHHH
Q 002768 707 IFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAV 741 (883)
Q Consensus 707 i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 741 (883)
+|++|+++.+|.++|++++++++++.++++++++.
T Consensus 720 ~~~~r~~~~~~~~~p~~~l~~~~~~~~~~~~~~~~ 754 (755)
T TIGR01647 720 IFVTRTHGFFWSERPGKLLFIAFVIAQIIATFIAV 754 (755)
T ss_pred HheeccCCCCcccCCcHHHHHHHHHHHHHHHHHhh
Confidence 89999999999999999999999988888777654
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-126 Score=1170.14 Aligned_cols=750 Identities=31% Similarity=0.480 Sum_probs=608.0
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCh----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDW----QDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLA 77 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~----~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~ 77 (883)
+.++|.+|++||++|+.++|+++++++++++ .| .++..|++++++|++++++||+++++++++|+++.+
T Consensus 67 ~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~-------~~~~~~~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~ 139 (917)
T COG0474 67 KRSLLKKFLRQFKDPFIILLLVAALLSAFVG-------DWVDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSS 139 (917)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cccccCcceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3589999999999999999999999999994 66 566789999999999999999999999999999999
Q ss_pred CeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccC--------------C
Q 002768 78 PKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT--------------A 143 (883)
Q Consensus 78 ~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~--------------g 143 (883)
++++|+|||++++|+++||||||||.|++||+||||+||+++++++||| |+|||||.|+.|.+ .
T Consensus 140 ~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdE--s~LTGES~pv~K~~~~~~~~~~~~~~d~~ 217 (917)
T COG0474 140 PKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDE--SALTGESLPVEKQALPLTKSDAPLGLDRD 217 (917)
T ss_pred CceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecCceEEc--ccccCCCcchhccccccccccccccCCcc
Confidence 9999999999999999999999999999999999999999999999999 99999999999963 4
Q ss_pred CeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHH
Q 002768 144 DEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRD 222 (883)
Q Consensus 144 ~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 222 (883)
+++|+||.+++|++.++|++||.+|++|++++++... ...+|+|+.+++++++++...+++.++.+++.+...+.+|.+
T Consensus 218 n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 297 (917)
T COG0474 218 NMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLE 297 (917)
T ss_pred ceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence 7899999999999999999999999999999999998 789999999999998876554444444333333322334789
Q ss_pred HHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCC
Q 002768 223 GINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRN 302 (883)
Q Consensus 223 ~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~ 302 (883)
.+..+++++++++|++||+.+++++++|+.+|+++++++|+++++|+||++|+||||||||||+|+|+|.+++......+
T Consensus 298 ~~~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~ 377 (917)
T COG0474 298 SFLTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKD 377 (917)
T ss_pred HHHHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999885420111
Q ss_pred CC------h---HHHHHHHHHHhcc--c------cCChHHHHHHHHhCC------hHHHhhcccEeEeecCCCCCceEEE
Q 002768 303 MD------K---DMIVLLAARAARL--E------NQDAIDAAIINMLAD------PKEARANIKEVHFLPFNPVDKRTAI 359 (883)
Q Consensus 303 ~~------~---~~~l~~a~~~~~~--~------~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pF~~~~k~~sv 359 (883)
.+ . ..++..++.|+.. . .+||+|.|++..+.+ ....+..+++++++||||.||||++
T Consensus 378 ~~~~~~~~~~~~~~~l~~~~lc~~~~~~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsv 457 (917)
T COG0474 378 IDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSV 457 (917)
T ss_pred ccccccccchHHHHHHHHHHhcCcccccccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEE
Confidence 22 0 1244555555422 2 469999999998753 3444556678999999999999999
Q ss_pred EEEcCCCcEEEEEcCcHHHHHhhhhc-------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc----CCCCCCce
Q 002768 360 TYIDSDGNWYRASKGAPEQILNLCKE-------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK----ESPGGPWT 428 (883)
Q Consensus 360 ~~~~~~g~~~~~~KGa~e~il~~c~~-------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~----~~~e~~l~ 428 (883)
++++.+|+++.++|||||.|+++|+. .++.++.+++..++|+++||||+++||+..+..+. +..|++|+
T Consensus 458 iv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~ 537 (917)
T COG0474 458 IVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLV 537 (917)
T ss_pred EEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccccchhhhhhccce
Confidence 99977777999999999999999974 45677889999999999999999999997765443 57899999
Q ss_pred EEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcC
Q 002768 429 FCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEAD 508 (883)
Q Consensus 429 ~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 508 (883)
|+|+++|+||||+|++++|+.|+++||+||||||||+.||++||++||+..+.....+++|.+++.++++++.+.+++.+
T Consensus 538 ~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~ 617 (917)
T COG0474 538 FLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELS 617 (917)
T ss_pred eehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCc
Confidence 99999999999999999999999999999999999999999999999998764334589999999999999999999999
Q ss_pred cEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHH
Q 002768 509 GFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAI 587 (883)
Q Consensus 509 vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~ 587 (883)
||||++|+||+++|+.||++||+|+|||||+||+||||+|||||||| +|||+||+||||++++++|++|+.+|++||++
T Consensus 618 VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~ 697 (917)
T COG0474 618 VFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRV 697 (917)
T ss_pred EEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHH
Confidence 99999999999999999999999999999999999999999999998 79999999999999999999999999999999
Q ss_pred HHHHHHHH-------HH----HHHH-HHhhc-CCCChHHHHHHHHHhhhhh-cccccCC-----CCC-CCCCCcc-chHH
Q 002768 588 FQRMKNYT-------LG----FVLL-ALIWE-YDFPPFMVLIIAILNDGTI-MTISKDR-----VKP-SPRPDSW-KLNE 646 (883)
Q Consensus 588 ~~~i~~~~-------~~----~~~~-~~~~~-~~~~~~~il~i~~~~d~~~-~~l~~d~-----~~~-~~~p~~~-~~~~ 646 (883)
|+|++|++ ++ +++. .+.+. +||+++|++|+|+++|++| ++++.++ +++ +++|.+. +..+
T Consensus 698 ~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~ 777 (917)
T COG0474 698 YVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRPPRGPEEGLFNRK 777 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCcccccccCCCCccccccchh
Confidence 99999988 11 1111 11122 5799999999999999985 7777654 233 3355542 2344
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHH-HHHHHHhcCCCccccc---h
Q 002768 647 IFAT-GIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQ-ALIFVTRSQSWSFLER---P 721 (883)
Q Consensus 647 ~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~r~~~~~~~~~---~ 721 (883)
.++. .+..|...++.+++.|.+.+... .....+.. .......+++|...++.| +..+.+|+.+.+|++. +
T Consensus 778 ~~~~~i~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 852 (917)
T COG0474 778 IFWRFILIIGLLSAILFILTFLLYLLGF-IANTLGLD----LFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFS 852 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc-cccccchh----hHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhccccc
Confidence 5555 45556666766666666554321 11111100 013334444555555555 4589999877666554 4
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcc--cccccCcchhhHHHHHHHHH
Q 002768 722 GALLMCAFVVAQLVATLIAVYAHI--SFAYISGVGWGWAGVIWLYS 765 (883)
Q Consensus 722 ~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 765 (883)
++.++++++++.++..++.++... ..+...++++.-|+.+..++
T Consensus 853 n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 898 (917)
T COG0474 853 NKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVA 898 (917)
T ss_pred CHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHH
Confidence 555555544444444333332221 23445555544344433333
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-125 Score=1153.16 Aligned_cols=755 Identities=27% Similarity=0.421 Sum_probs=623.9
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
+.|+|+.|+++|++|++++|++++++++++ ++|.++++|++++++|..++++||+|+++++++|+++.+++++
T Consensus 90 ~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~-------~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ 162 (902)
T PRK10517 90 PLPWWVHLWVCYRNPFNILLTILGAISYAT-------EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTAT 162 (902)
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHH-------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEE
Confidence 357999999999999999999999999998 4899999999999999999999999999999999999999999
Q ss_pred EEEC------CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCC-----------
Q 002768 82 VLRE------GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD----------- 144 (883)
Q Consensus 82 V~Rd------g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~----------- 144 (883)
|+|| |++++|+++||||||+|.|++||+|||||+|++|+++.||| |+|||||.||.|++++
T Consensus 163 ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDE--S~LTGES~PV~K~~~~~~~~~~~~~~~ 240 (902)
T PRK10517 163 VLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQ--ASLTGESLPVEKFATTRQPEHSNPLEC 240 (902)
T ss_pred EEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEe--cCcCCCCCceecccccccccccCcccc
Confidence 9999 78999999999999999999999999999999999899999 9999999999999874
Q ss_pred --eeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchH
Q 002768 145 --EVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYR 221 (883)
Q Consensus 145 --~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~ 221 (883)
++|+||.|.+|+++++|++||.+|++|||+++++++ .+++|+|+.+++++++++...++.+.+.++ .+.+...+|.
T Consensus 241 ~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~-i~~~~~~~~~ 319 (902)
T PRK10517 241 DTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLL-INGYTKGDWW 319 (902)
T ss_pred ccceeeCceEeeeeEEEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhh-HHHHhcCCHH
Confidence 799999999999999999999999999999999887 678999999999988765433333322222 2223345788
Q ss_pred HHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccC
Q 002768 222 DGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301 (883)
Q Consensus 222 ~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~ 301 (883)
+++..++++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.. . ..
T Consensus 320 ~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~--~-~~ 396 (902)
T PRK10517 320 EAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHT--D-IS 396 (902)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEe--c-CC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998753 1 12
Q ss_pred CCChHHHHHHHHHHhccc--cCChHHHHHHHHhCCh--HHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHH
Q 002768 302 NMDKDMIVLLAARAARLE--NQDAIDAAIINMLADP--KEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPE 377 (883)
Q Consensus 302 ~~~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e 377 (883)
+.+.++++.+++.++... .+||+|.|++.++... ......|+.++++||||.+|+|++++.+.++.+..++||+||
T Consensus 397 ~~~~~~ll~~a~l~~~~~~~~~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e 476 (902)
T PRK10517 397 GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALE 476 (902)
T ss_pred CCCHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchH
Confidence 345566777776655432 4689999998876532 223456888999999999999999887667777899999999
Q ss_pred HHHhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc---CCCCCCceEEeecCCCCCCCccHH
Q 002768 378 QILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK---ESPGGPWTFCGLLPLFDPPRHDSV 444 (883)
Q Consensus 378 ~il~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~---~~~e~~l~~lG~i~l~D~~R~~~~ 444 (883)
.++++|+. +++..+++.+..++++++|+|++++||++++..+. ...|++++|+|+++|+||||||++
T Consensus 477 ~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~ 556 (902)
T PRK10517 477 EILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTA 556 (902)
T ss_pred HHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHH
Confidence 99999964 12445677888899999999999999998754321 123679999999999999999999
Q ss_pred HHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHH
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKI 524 (883)
Q Consensus 445 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 524 (883)
++|++|+++||+|+|+||||+.||.++|+++||. +..+++|.+++.++++++++.+++.++|||++||||+++|+.
T Consensus 557 ~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~----~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~ 632 (902)
T PRK10517 557 PALKALKASGVTVKILTGDSELVAAKVCHEVGLD----AGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTL 632 (902)
T ss_pred HHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----ccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHH
Confidence 9999999999999999999999999999999995 346899999999999999999999999999999999999999
Q ss_pred HhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH---------
Q 002768 525 LQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT--------- 595 (883)
Q Consensus 525 lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~--------- 595 (883)
||++||+|+|||||+||+||||+||||||||+|||+||++||+||+||||++|+++|++||++|+||+||+
T Consensus 633 Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~ 712 (902)
T PRK10517 633 LKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFG 712 (902)
T ss_pred HHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred -HHHHHH-HHhhc-CCCChHHHHHHHHHhhhhhcccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 596 -LGFVLL-ALIWE-YDFPPFMVLIIAILNDGTIMTISKDRVKPSP--RPDSWKLNEIFATGIVIGTYLALVTVLFYWVVV 670 (883)
Q Consensus 596 -~~~~~~-~~~~~-~~~~~~~il~i~~~~d~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 670 (883)
+..+++ .++++ +|++|+|++|+|+++|...+++++|++.+.. +|++|....+....++.|.+.+++++..|++++
T Consensus 713 ~v~~~~~~~~~~~~~pl~~~qiL~inl~~D~~~~al~~d~~~~~~m~~p~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 792 (902)
T PRK10517 713 NVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMW 792 (902)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhHHhhcCCCCChhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111222 22344 5889999999999999777999999988764 788888877777788889998887776666543
Q ss_pred hccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCc-cccchhHHHHHHHHHHHHHHHHHHHhhccccc
Q 002768 671 DTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWS-FLERPGALLMCAFVVAQLVATLIAVYAHISFA 748 (883)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 748 (883)
.. ++... ........+.+|...+++|.+ +|++|+++.+ |.++|.+..++..++.+++.+++++....+++
T Consensus 793 ~~------~~~~~--~~~~~~~~~~~F~~~~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 864 (902)
T PRK10517 793 WV------FHANT--PETQTLFQSGWFVVGLLSQTLIVHMIRTRRIPFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYL 864 (902)
T ss_pred HH------ccccc--hhhHhHHHHHHHHHHHHHHHHHHHhhccCCCCcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhh
Confidence 21 11100 000011222347777788875 7999997644 44455555555545555555555522223455
Q ss_pred ccCcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 749 YISGVG--WGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 749 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
.+.+++ +..|+++++++.. ++.++.|..+.+.+
T Consensus 865 ~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 865 QLQALPLSYFPWLVAILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred CCcCCChhHHHHHHHHHHHHH--HHHHHHHHHHHHhh
Confidence 677777 4444444444433 55777777655443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-124 Score=1148.08 Aligned_cols=763 Identities=25% Similarity=0.402 Sum_probs=623.1
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANG----GGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAP 78 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~----~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~ 78 (883)
.++|+.|++||++|+.++|+++++++++++.. .+...+|.++++|++++++|..++++||++++++.++|+++.++
T Consensus 69 ~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~ 148 (903)
T PRK15122 69 PHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRT 148 (903)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 57899999999999999999999999998532 12335899999999999999999999999999999999999999
Q ss_pred eeEEEEC------CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccC----------
Q 002768 79 KTKVLRE------GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT---------- 142 (883)
Q Consensus 79 ~~~V~Rd------g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~---------- 142 (883)
+++|+|| |++++|+++||||||+|.|++||+|||||+|++|+++.||| |+|||||.|+.|++
T Consensus 149 ~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDE--S~LTGES~PV~K~~~~~~~~~~~~ 226 (903)
T PRK15122 149 TATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQ--AVLTGEALPVEKYDTLGAVAGKSA 226 (903)
T ss_pred ceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEc--cccCCCCcceeeeccccccccccc
Confidence 9999999 48999999999999999999999999999999999899999 99999999999985
Q ss_pred -------------CCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 143 -------------ADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEI 209 (883)
Q Consensus 143 -------------g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~ 209 (883)
+|++|+||.|.+|+++++|++||.+|++|||++++.+.+.++++|+.++++++++.....+++.+.+
T Consensus 227 ~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~ 306 (903)
T PRK15122 227 DALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVL 306 (903)
T ss_pred cccccccCCcccccceEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3689999999999999999999999999999999988666789999999988765433222222211
Q ss_pred HhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCce
Q 002768 210 IVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRL 289 (883)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m 289 (883)
++ ..+...+|.+++..++++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|
T Consensus 307 ~~-~~~~~~~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m 385 (903)
T PRK15122 307 LI-NGFTKGDWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRI 385 (903)
T ss_pred hh-hhhccCCHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeE
Confidence 11 12234578889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeEEEEEeccCCCChHHHHHHHHHHhcc--ccCChHHHHHHHHhCChH--HHhhcccEeEeecCCCCCceEEEEEEcCC
Q 002768 290 TVDRNLIEVFNRNMDKDMIVLLAARAARL--ENQDAIDAAIINMLADPK--EARANIKEVHFLPFNPVDKRTAITYIDSD 365 (883)
Q Consensus 290 ~v~~~~i~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~ai~~~~~~~~--~~~~~~~~l~~~pF~~~~k~~sv~~~~~~ 365 (883)
+|.+.+ .. .+.+.++++.+++.++.. ..+||+|.|++.++.+.. .....++.++.+||++.+|+|++++++.+
T Consensus 386 ~V~~~~--~~-~~~~~~~~l~~a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~ 462 (903)
T PRK15122 386 ILEHHL--DV-SGRKDERVLQLAWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQ 462 (903)
T ss_pred EEEEEE--cC-CCCChHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCC
Confidence 998864 11 233455667766654332 246899999998865321 12346788999999999999999988767
Q ss_pred CcEEEEEcCcHHHHHhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc-----CCCCCCceEE
Q 002768 366 GNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK-----ESPGGPWTFC 430 (883)
Q Consensus 366 g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~-----~~~e~~l~~l 430 (883)
|+++.++|||||.++++|+. +++.++++.+..++++++|+|++++||++++..+. +..|++++|+
T Consensus 463 ~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~l 542 (903)
T PRK15122 463 GQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIR 542 (903)
T ss_pred CcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEE
Confidence 88899999999999999963 23446677888899999999999999998754321 2357899999
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcE
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGF 510 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vf 510 (883)
|+++++||||||++++|++|+++||+|+|+||||+.||.++|+++||.. ..+++|.+++.++++++.+.+++.++|
T Consensus 543 Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~----~~vi~G~el~~~~~~el~~~v~~~~Vf 618 (903)
T PRK15122 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP----GEPLLGTEIEAMDDAALAREVEERTVF 618 (903)
T ss_pred EEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC----CCccchHhhhhCCHHHHHHHhhhCCEE
Confidence 9999999999999999999999999999999999999999999999953 468999999999999999999999999
Q ss_pred EEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHH
Q 002768 511 AGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQR 590 (883)
Q Consensus 511 ar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~ 590 (883)
||++||||+++|+.||++||+|+|||||+||+||||+||||||||+|||+||++||+||+||||++|++++++||++|+|
T Consensus 619 Ar~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~n 698 (903)
T PRK15122 619 AKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGN 698 (903)
T ss_pred EEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH----------HHHHHH-Hhhc-CCCChHHHHHHHHHhhhhhcccccCCCCCCC--CCCccchHHHHHHHHHHHH
Q 002768 591 MKNYTL----------GFVLLA-LIWE-YDFPPFMVLIIAILNDGTIMTISKDRVKPSP--RPDSWKLNEIFATGIVIGT 656 (883)
Q Consensus 591 i~~~~~----------~~~~~~-~~~~-~~~~~~~il~i~~~~d~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~g~ 656 (883)
|+||+. ..++++ ++++ +|++|+|++|+|+++|+..+++++|++.+.. +|.+|..+.+-...+.+|.
T Consensus 699 I~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~~~lal~~d~~~~~~m~~P~~~~~~~~~~~~~~~g~ 778 (903)
T PRK15122 699 IIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGP 778 (903)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHhhcCCCCCHhhcCCCCCCChhhhHHHHHHHHH
Confidence 999871 111111 2223 6788999999999999877999999886543 5666655433334445677
Q ss_pred HHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCccccc-hhHHHHHHHHHHHH
Q 002768 657 YLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLER-PGALLMCAFVVAQL 734 (883)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~~-~~~~l~~~~~~~~~ 734 (883)
+.+++++..|++.+.. +. .+.. .......+.+|...+++|.+ +|++|+++.+++++ +.+..+++.++.++
T Consensus 779 ~~~~~~~~~~~~~~~~--~~--~~~~----~~~~~~~t~~f~~l~~~q~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~ 850 (903)
T PRK15122 779 TSSIFDITTFALMWFV--FA--ANSV----EMQALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSTAALPVLLTTGLIMA 850 (903)
T ss_pred HHHHHHHHHHHHHHHH--hc--cCcH----hhhhhhHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHH
Confidence 7766666555543211 10 0100 00011234557777888865 89999976444444 44444444444455
Q ss_pred HHHHHHHhhcccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 735 VATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 735 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
+.+++++.....++.+.++++..|++++.+++.++++.++.|.++++.+
T Consensus 851 ~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 851 IGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred HHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 5555554111234568888888888888888888888999886655444
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-123 Score=1139.98 Aligned_cols=754 Identities=25% Similarity=0.402 Sum_probs=617.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
.++|+.|+++|++|++|+|++++++++++ ++|.++++|++++++|..++++||+|++++.++|+++.+++++|
T Consensus 57 ~~~~~~~~~~~~~p~~~iL~~~a~ls~~~-------~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V 129 (867)
T TIGR01524 57 VPNLRLLIRAFNNPFIYILAMLMGVSYLT-------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATV 129 (867)
T ss_pred CCHHHHHHHHHhhHHHHHHHHHHHHHHHH-------hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEE
Confidence 47899999999999999999999999988 48999999999999999999999999999999999999999999
Q ss_pred EE------CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCC------------
Q 002768 83 LR------EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD------------ 144 (883)
Q Consensus 83 ~R------dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~------------ 144 (883)
+| ||++++|+++||||||+|.+++||+|||||+|++|+++.||| |+|||||.|+.|.+|+
T Consensus 130 ~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDE--S~LTGES~PV~K~~~~~~~~~~~~~~~~ 207 (867)
T TIGR01524 130 LRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQ--SALTGESLPVEKFVEDKRARDPEILERE 207 (867)
T ss_pred EEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEc--ccccCCCCcccccCCccccccccccccc
Confidence 99 999999999999999999999999999999999999899999 9999999999999875
Q ss_pred -eeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHH
Q 002768 145 -EVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDG 223 (883)
Q Consensus 145 -~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 223 (883)
++|+||.|.+|+++++|++||.+|++||+++++.+.+.++|+|+.++++++++....++.+++.+ +.+.+...+|.++
T Consensus 208 n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~ 286 (867)
T TIGR01524 208 NLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVL-MINGLMKGDWLEA 286 (867)
T ss_pred cceecCCeEEEeEEEEEEEEEcCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhe-ehHHHhcCCHHHH
Confidence 69999999999999999999999999999999988766789999999999886554433333222 2222334578888
Q ss_pred HHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCC
Q 002768 224 INNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNM 303 (883)
Q Consensus 224 ~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~ 303 (883)
+..++++++++|||+||++++++++.|+++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+.. . ..+.
T Consensus 287 ~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~--~-~~~~ 363 (867)
T TIGR01524 287 FLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHI--D-SSGE 363 (867)
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEe--c-CCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998853 1 1234
Q ss_pred ChHHHHHHHHHHhccc--cCChHHHHHHHHhCCh--HHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHH
Q 002768 304 DKDMIVLLAARAARLE--NQDAIDAAIINMLADP--KEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQI 379 (883)
Q Consensus 304 ~~~~~l~~a~~~~~~~--~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~i 379 (883)
+.++++.+++.++..+ ..||+|.|++.++.+. ...+..++.++.+||||.+|+|++++++.++..+.++||+||.+
T Consensus 364 ~~~~~l~~a~l~~~~~~~~~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~i 443 (867)
T TIGR01524 364 TSERVLKMAWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEM 443 (867)
T ss_pred CHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHH
Confidence 5566777666554432 3599999999886532 22345678899999999999999988765566788999999999
Q ss_pred Hhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc---CCCCCCceEEeecCCCCCCCccHHHH
Q 002768 380 LNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK---ESPGGPWTFCGLLPLFDPPRHDSVDT 446 (883)
Q Consensus 380 l~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~---~~~e~~l~~lG~i~l~D~~R~~~~~~ 446 (883)
+++|+. +++.++++++.+++++++|+|++++|+++++..+. +..|++|+|+|+++++||||+|++++
T Consensus 444 l~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~a 523 (867)
T TIGR01524 444 LTVCTHKRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEA 523 (867)
T ss_pred HHhchhhhcCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHH
Confidence 999964 23445678888999999999999999998765321 12478899999999999999999999
Q ss_pred HHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHh
Q 002768 447 IRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQ 526 (883)
Q Consensus 447 I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq 526 (883)
|++|+++||+|+|+||||+.||+++|+++||.. ..+++|.+++.++++++.+.+++.++|||++||||+++|+.||
T Consensus 524 I~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~----~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq 599 (867)
T TIGR01524 524 IAALFKNGINVKVLTGDNEIVTARICQEVGIDA----NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLK 599 (867)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC----CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHH
Confidence 999999999999999999999999999999963 3688999999999999999999999999999999999999999
Q ss_pred hcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH----------H
Q 002768 527 EKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----------L 596 (883)
Q Consensus 527 ~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~----------~ 596 (883)
++||+|+|||||+||+||||+||||||||+|+|+||++||+||++|||++|+.+|++||++|+||+||+ +
T Consensus 600 ~~G~vVam~GDGvNDapALk~AdVGIAmg~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~ 679 (867)
T TIGR01524 600 KAGHTVGFLGDGINDAPALRKADVGISVDTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNV 679 (867)
T ss_pred hCCCEEEEECCCcccHHHHHhCCEEEEeCCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999987 1
Q ss_pred HHHHH-HHhhc-CCCChHHHHHHHHHhhhhhcccccCCCCCCC--CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 597 GFVLL-ALIWE-YDFPPFMVLIIAILNDGTIMTISKDRVKPSP--RPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDT 672 (883)
Q Consensus 597 ~~~~~-~~~~~-~~~~~~~il~i~~~~d~~~~~l~~d~~~~~~--~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 672 (883)
..+++ .++++ +|++|+|++|+|+++|...+++++|++.+.. +|.+|..+.+....++.|++.+++++..|++.+..
T Consensus 680 ~~~~~~~~~~~~~pl~~~qil~inl~~d~~~~al~~~~~~~~~m~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 759 (867)
T TIGR01524 680 FSVLVASAFIPFLPMLSLHLLIQNLLYDFSQLTLPWDKMDREFLKKPHQWEQKGMGRFMLCIGPVSSIFDIATFLLMWFV 759 (867)
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHhhcCCCCChHhhCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 22233 6899999999999999767999999987653 56667766677777788888877777666554321
Q ss_pred cccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCccccc-hhHHHHHHHHHHHHHHHHHHHhhccccccc
Q 002768 673 DFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLER-PGALLMCAFVVAQLVATLIAVYAHISFAYI 750 (883)
Q Consensus 673 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (883)
. +... . .......+.+|...+++|.+ +|++|+++.+++++ +.+..+++.++.+++.++++..+...++.+
T Consensus 760 ~------~~~~-~-~~~~~~~t~~f~~~~~~~~~~~~~~R~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~ 831 (867)
T TIGR01524 760 F------SANT-V-EEQALFQSGWFVVGLLSQTLVVHMIRTEKIPFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGL 831 (867)
T ss_pred h------cccc-h-hhhhHHHHHHHHHHHHHHHHHHHhhCcCCCCcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhcc
Confidence 0 0000 0 01112244557777788865 89999976444444 444444444444445445443210123456
Q ss_pred Ccch--hhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 751 SGVG--WGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 751 ~~~~--~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
.+++ |..|++++.++.+ ++.++.|.++.+.+
T Consensus 832 ~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~~~~~ 864 (867)
T TIGR01524 832 VSLPLSYFPWLIAILVGYM--ATMQLVKTFYIRRF 864 (867)
T ss_pred ccCCccHHHHHHHHHHHHH--HHHHHHHHHHHHhc
Confidence 6553 3333443444433 56788887655443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-123 Score=1153.37 Aligned_cols=765 Identities=25% Similarity=0.385 Sum_probs=612.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
++|+|+.|++||++|+.++|++++++++++ ++|.++++|++++++|+.++++||+++++++++|+++.+++++
T Consensus 49 ~~s~~~~~l~q~~~~~~~iL~~aails~~~-------~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ 121 (1053)
T TIGR01523 49 GIDAKAMLLHQVCNAMCMVLIIAAAISFAM-------HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAH 121 (1053)
T ss_pred CCCHHHHHHHHHhCHHHHHHHHHHHHHHHH-------hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceE
Confidence 358999999999999999999999999998 4899999999999999999999999999999999999999999
Q ss_pred EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC---------------Cee
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---------------DEV 146 (883)
Q Consensus 82 V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---------------~~v 146 (883)
|+|||++++|+++||||||||.|++||+|||||||+++++|.||| |+|||||.||.|.+. +++
T Consensus 122 ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDE--S~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~l 199 (1053)
T TIGR01523 122 VIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDE--ALLTGESLPVIKDAHATFGKEEDTPIGDRINLA 199 (1053)
T ss_pred EEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCceEEEc--hhhcCCCCceeccccccccccccCCcccCCCcc
Confidence 999999999999999999999999999999999999999999999 999999999999742 468
Q ss_pred eeeeeEeeCceEEEEEEccchhhhhhHhhhhcccc------------------------------------ccChHHHHH
Q 002768 147 FSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE------------------------------------VVGHFQQVL 190 (883)
Q Consensus 147 ~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~------------------------------------~~~~~~~~~ 190 (883)
|+||.|.+|+++++|++||.+|++|||++++.+.. .++|+|+.+
T Consensus 200 f~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l 279 (1053)
T TIGR01523 200 FSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKL 279 (1053)
T ss_pred ccCceEEeeeEEEEEEEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHH
Confidence 99999999999999999999999999999886431 138999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhh
Q 002768 191 TSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEM 270 (883)
Q Consensus 191 ~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~L 270 (883)
+++++++....++..++.++..+ . ..+...+...++++++++|++||+++++++++|++||++++++||+++++|+|
T Consensus 280 ~~l~~~l~~i~~~~~~~~~~~~~-~--~~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtL 356 (1053)
T TIGR01523 280 SKLAVILFCIAIIFAIIVMAAHK-F--DVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEAL 356 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-h--hhhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhc
Confidence 99998754433222222221111 1 12245667788999999999999999999999999999999999999999999
Q ss_pred cCceEEEeCCcCccccCceeeeEEEEEe---c---c--CCC---------------------------------------
Q 002768 271 AGMDVLCSDKTGTLTLNRLTVDRNLIEV---F---N--RNM--------------------------------------- 303 (883)
Q Consensus 271 g~v~~i~~DKTGTLT~n~m~v~~~~i~~---~---~--~~~--------------------------------------- 303 (883)
|++++||+|||||||+|+|+|.++++.. + + .++
T Consensus 357 G~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (1053)
T TIGR01523 357 GAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEI 436 (1053)
T ss_pred cCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999876421 0 0 000
Q ss_pred C-------h--HHHHHHHHHHhcc------------ccCChHHHHHHHHhCCh----------HHH--------------
Q 002768 304 D-------K--DMIVLLAARAARL------------ENQDAIDAAIINMLADP----------KEA-------------- 338 (883)
Q Consensus 304 ~-------~--~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~----------~~~-------------- 338 (883)
+ + ..++..++.|+.. ..+||+|.|++.++... .+.
T Consensus 437 ~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1053)
T TIGR01523 437 DLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQH 516 (1053)
T ss_pred ccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccc
Confidence 0 0 1244445555321 12599999998875311 011
Q ss_pred -----hhcccEeEeecCCCCCceEEEEEEcCCC-cEEEEEcCcHHHHHhhhhc------------cHHHHHHHHHHHHHH
Q 002768 339 -----RANIKEVHFLPFNPVDKRTAITYIDSDG-NWYRASKGAPEQILNLCKE------------KKEIAVKVHTIIDKF 400 (883)
Q Consensus 339 -----~~~~~~l~~~pF~~~~k~~sv~~~~~~g-~~~~~~KGa~e~il~~c~~------------~~~~~~~~~~~~~~~ 400 (883)
+..|+.++.+||||.+|||++++++.+| ++++++|||||.|+++|+. +++.++++.+.+++|
T Consensus 517 ~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 596 (1053)
T TIGR01523 517 NEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESL 596 (1053)
T ss_pred cccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHH
Confidence 2347789999999999999999986544 4788999999999999963 134567788899999
Q ss_pred HhcCCeEeEEeeecccccc------------cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHH
Q 002768 401 AERGLRSLAVAIQEVSEMT------------KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIA 468 (883)
Q Consensus 401 a~~G~R~l~vA~~~~~~~~------------~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA 468 (883)
+++|+|||++||+++++.+ .+..|++|+|+|+++++||||+|++++|++|+++||+|+|+||||+.||
T Consensus 597 a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA 676 (1053)
T TIGR01523 597 AAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETA 676 (1053)
T ss_pred HhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 9999999999999876431 1245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCC--------CCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcC
Q 002768 469 KETGRRLGMATNM--------YPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540 (883)
Q Consensus 469 ~~ia~~lGi~~~~--------~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvN 540 (883)
.++|+++||..+. ....+++|.+++.++++++++++++..||||++|+||+++|+.||++|++|+|||||+|
T Consensus 677 ~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvN 756 (1053)
T TIGR01523 677 KAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVN 756 (1053)
T ss_pred HHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcc
Confidence 9999999996431 12468899999999999999999999999999999999999999999999999999999
Q ss_pred CHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHhh----
Q 002768 541 DAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----------LGFVLLALIW---- 605 (883)
Q Consensus 541 DapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~----------~~~~~~~~~~---- 605 (883)
|+||||+|||||||| +|+|+||++||++|++|||++|+.++++||++|+||+|++ +.++++..++
T Consensus 757 DapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~ 836 (1053)
T TIGR01523 757 DSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDEN 836 (1053)
T ss_pred hHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc
Confidence 999999999999999 8999999999999999999999999999999999999987 1111221222
Q ss_pred ---cCCCChHHHHHHHHHhhhhh-cccccCCCCC-----CCCC-C-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 002768 606 ---EYDFPPFMVLIIAILNDGTI-MTISKDRVKP-----SPRP-D-SWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDF 674 (883)
Q Consensus 606 ---~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~-----~~~p-~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 674 (883)
.+|++|+|++|+|+++|+++ +++++|++.+ +|++ + +...++++...+++|+++++.+++.|++.+....
T Consensus 837 g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~ 916 (1053)
T TIGR01523 837 GKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFG 916 (1053)
T ss_pred CCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 26788999999999999875 8899887643 2222 2 2233466777888999999988877765432100
Q ss_pred ccc-------ccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccc------------------chhHHHHHH
Q 002768 675 FET-------HFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLE------------------RPGALLMCA 728 (883)
Q Consensus 675 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~------------------~~~~~l~~~ 728 (883)
.+. .++..+ .....+.+++|.+.+++|+. .|++|+.+.+.+. ..+.+++++
T Consensus 917 ~~~~~~~~~~~~~~~~---~~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~ 993 (1053)
T TIGR01523 917 SGNLGHDCDAHYHAGC---NDVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWA 993 (1053)
T ss_pred Cccccccccccccccc---cchhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHH
Confidence 000 000000 11234567888888888875 7899986544221 124455555
Q ss_pred HHHHHHHHHHHHHhhc-c--cccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 729 FVVAQLVATLIAVYAH-I--SFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 729 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
++++.++..+ .+|.+ . .++.+.+++|.| +.+++++++.++..|++|++.|++.
T Consensus 994 ~~~~~~l~~~-~~~~p~~~~~~f~~~~l~~~w-~~~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 994 IAFAAVSAFP-TIYIPVINDDVFKHKPIGAEW-GLAAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred HHHHHHHHHH-HHhhhhhhhhhhccCCcchHH-HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5544333322 22322 2 256778888855 4568888899999999999877554
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-118 Score=1100.41 Aligned_cols=746 Identities=28% Similarity=0.420 Sum_probs=619.0
Q ss_pred CchHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCee
Q 002768 2 QENKFLKFLSFM-WNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKT 80 (883)
Q Consensus 2 ~~~~~~~~l~~~-~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~ 80 (883)
++|+|+.|++|| ++|++++|++++++++++ ++|.+++.|+++++++..++++||+++++++++|+++.++++
T Consensus 47 ~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~-------g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~ 119 (884)
T TIGR01522 47 DESLWKKFLSQFVKNPLILLLIASAVISVFM-------GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPEC 119 (884)
T ss_pred CCCHHHHHHHHHhhChHHHHHHHHHHHHHHH-------cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCee
Confidence 368999999999 999999999999999998 489999999999999999999999999999999999999999
Q ss_pred EEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCC--------------ee
Q 002768 81 KVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD--------------EV 146 (883)
Q Consensus 81 ~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~--------------~v 146 (883)
+|+|||++++|+++||||||+|.+++||+|||||+|++|+++.||| |+|||||.|+.|++|+ ++
T Consensus 120 ~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDE--S~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v 197 (884)
T TIGR01522 120 HLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDE--SNLTGETTPVSKVTAPIPAATNGDLAERSNIA 197 (884)
T ss_pred EEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCceEEEc--ccccCCCcceecccccccccccccccccCceE
Confidence 9999999999999999999999999999999999999998889999 9999999999999874 79
Q ss_pred eeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHH
Q 002768 147 FSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGIN 225 (883)
Q Consensus 147 ~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 225 (883)
|+||.|.+|+++++|++||.+|++||++++++++ ..++|+|+.++++++++....++.+++.+++.| +.+.+|.+++.
T Consensus 198 ~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 276 (884)
T TIGR01522 198 FMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW-FQGKDWLEMFT 276 (884)
T ss_pred EeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCHHHHHH
Confidence 9999999999999999999999999999999886 568999999999998765433222222222223 34567888999
Q ss_pred HHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEec-c---C
Q 002768 226 NLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVF-N---R 301 (883)
Q Consensus 226 ~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~-~---~ 301 (883)
..+++++++|||+||++++++++.|+.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++.... . .
T Consensus 277 ~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~ 356 (884)
T TIGR01522 277 ISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLN 356 (884)
T ss_pred HHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998763210 0 0
Q ss_pred --CC-------------------ChHHHHHHHHHHhccc--------cCChHHHHHHHHhCCh--HHHhhcccEeEeecC
Q 002768 302 --NM-------------------DKDMIVLLAARAARLE--------NQDAIDAAIINMLADP--KEARANIKEVHFLPF 350 (883)
Q Consensus 302 --~~-------------------~~~~~l~~a~~~~~~~--------~~~~~~~ai~~~~~~~--~~~~~~~~~l~~~pF 350 (883)
+. +...++..++.|+... .+||+|.|++.++... +..+..++.++.+||
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF 436 (884)
T TIGR01522 357 AVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPF 436 (884)
T ss_pred CCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCC
Confidence 00 0123445555544321 2479999999886432 223456888999999
Q ss_pred CCCCceEEEEEEc-CCCcEEEEEcCcHHHHHhhhhc-----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccc
Q 002768 351 NPVDKRTAITYID-SDGNWYRASKGAPEQILNLCKE-----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEM 418 (883)
Q Consensus 351 ~~~~k~~sv~~~~-~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~ 418 (883)
+|.+|||+++++. .+|+++.++||+||.|++.|.. +++.++++.+.+++++++|+|++++||+++
T Consensus 437 ~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~~~~--- 513 (884)
T TIGR01522 437 SSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPE--- 513 (884)
T ss_pred CCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEEEcC---
Confidence 9999999998875 3577889999999999999963 134466788888999999999999999974
Q ss_pred ccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcc
Q 002768 419 TKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEAL 498 (883)
Q Consensus 419 ~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~ 498 (883)
+.+|+|+|+++++||||+|++++|++|+++||+++|+|||++.||.++|+++||..+ ...+++|.+++.++++
T Consensus 514 -----~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~--~~~~v~g~~l~~~~~~ 586 (884)
T TIGR01522 514 -----KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSK--TSQSVSGEKLDAMDDQ 586 (884)
T ss_pred -----CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--CCceeEhHHhHhCCHH
Confidence 467999999999999999999999999999999999999999999999999999754 3457889999999999
Q ss_pred cHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHH
Q 002768 499 PVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVI 577 (883)
Q Consensus 499 ~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i 577 (883)
++++.+++.++|||++|+||.++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|||++|
T Consensus 587 ~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i 666 (884)
T TIGR01522 587 QLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATI 666 (884)
T ss_pred HHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 7999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH----------HHH--HHHHHhhcCCCChHHHHHHHHHhhhhh-cccccCCCCC-----CCC-
Q 002768 578 ISAVLTSRAIFQRMKNYT----------LGF--VLLALIWEYDFPPFMVLIIAILNDGTI-MTISKDRVKP-----SPR- 638 (883)
Q Consensus 578 ~~ai~~gR~~~~~i~~~~----------~~~--~~~~~~~~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~-----~~~- 638 (883)
++++++||++|+||+|++ +.+ +...+.++.|++|+|++|+|+++|+++ +++++|++.+ +|+
T Consensus 667 ~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~ 746 (884)
T TIGR01522 667 LSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKDVMRKPPRP 746 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChhHhhCCCCC
Confidence 999999999999999987 111 112223467899999999999999986 8899877633 222
Q ss_pred CCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCCc
Q 002768 639 PDSW-KLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSWS 716 (883)
Q Consensus 639 p~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~ 716 (883)
++.. ..+.++..+++.|+++++.++++|++.+.. +......++++|.+.+++|++ .|++|+++.+
T Consensus 747 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-------------~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~ 813 (884)
T TIGR01522 747 RNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQD-------------GVITARDTTMTFTCFVFFDMFNALACRSQTKS 813 (884)
T ss_pred CCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcC-------------CcchhhHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence 2222 234677778889999888877666554310 011234567788888888875 7999997665
Q ss_pred ccc---chhHHHHHHHHHHHHHHHHHHHhhc--ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 717 FLE---RPGALLMCAFVVAQLVATLIAVYAH--ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRY 781 (883)
Q Consensus 717 ~~~---~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~ 781 (883)
+++ .++.++++++++..++. ++.+|.+ ..++.+.|++|..|+.+++++++.+++.+++|++.|+
T Consensus 814 ~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~ 882 (884)
T TIGR01522 814 VFEIGFFSNRMFNYAVGGSIIGQ-LLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERS 882 (884)
T ss_pred ccccCcccCHHHHHHHHHHHHHH-HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 443 13444544444433322 2222311 2456788899999999999999999999999988664
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-118 Score=1107.56 Aligned_cols=778 Identities=22% Similarity=0.354 Sum_probs=622.7
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGG------GQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAH 75 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~------~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~ 75 (883)
+.++|++|+++|++|++++|+++++++++..... ....+|.+++++++++++|+.++++||+|+++++++|+++
T Consensus 59 ~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~ 138 (997)
T TIGR01106 59 TTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNM 138 (997)
T ss_pred CCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4579999999999999999999999988764211 1224789999999999999999999999999999999999
Q ss_pred CCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCC----------e
Q 002768 76 LAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTAD----------E 145 (883)
Q Consensus 76 ~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~----------~ 145 (883)
.+++++|+|||++++|+++||||||+|.|++||+|||||+|++|+++.||| |+|||||.|+.|.+++ +
T Consensus 139 ~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~Vde--S~LTGES~pv~K~~~~~~~~~~~~~n~ 216 (997)
T TIGR01106 139 VPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDN--SSLTGESEPQTRSPEFTHENPLETRNI 216 (997)
T ss_pred CCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEc--cccCCCCCceeccCCCcccCccccCCe
Confidence 999999999999999999999999999999999999999999998889999 9999999999998874 6
Q ss_pred eeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHH
Q 002768 146 VFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGI 224 (883)
Q Consensus 146 v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~ 224 (883)
+|+||.|.+|++.++|++||.+|++||+++++++. .+++|+|+.++++++.+....+++.++.+ +.+...+.+|.+++
T Consensus 217 l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 295 (997)
T TIGR01106 217 AFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFF-ILSLILGYTWLEAV 295 (997)
T ss_pred EEeccEeeeeeEEEEEEEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcCCHHHHH
Confidence 99999999999999999999999999999998876 56799999999998876543333222222 22233456788888
Q ss_pred HHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe--cc-C
Q 002768 225 NNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV--FN-R 301 (883)
Q Consensus 225 ~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~-~ 301 (883)
..++++++++|||+||++++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.++++.. +. .
T Consensus 296 ~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~ 375 (997)
T TIGR01106 296 IFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEAD 375 (997)
T ss_pred HHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999876421 10 0
Q ss_pred C--------CCh-----HHHHHHHHHHhcc---------------ccCChHHHHHHHHhC----ChHHHhhcccEeEeec
Q 002768 302 N--------MDK-----DMIVLLAARAARL---------------ENQDAIDAAIINMLA----DPKEARANIKEVHFLP 349 (883)
Q Consensus 302 ~--------~~~-----~~~l~~a~~~~~~---------------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~p 349 (883)
+ .+. +.++..++.|+.. ..+||+|.|++.++. +..+.+..++.++.+|
T Consensus 376 ~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~p 455 (997)
T TIGR01106 376 TTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIP 455 (997)
T ss_pred CccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEec
Confidence 0 111 1345555555321 125899999988753 3344566789999999
Q ss_pred CCCCCceEEEEEEc--C-CCcEEEEEcCcHHHHHhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccc
Q 002768 350 FNPVDKRTAITYID--S-DGNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVS 416 (883)
Q Consensus 350 F~~~~k~~sv~~~~--~-~g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~ 416 (883)
|+|+||||++++.. . ++++++++|||||.|+++|+. +++.++.+.+.+++++++|+||+++||++++
T Consensus 456 F~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~ 535 (997)
T TIGR01106 456 FNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLP 535 (997)
T ss_pred cCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecC
Confidence 99999999988763 2 246789999999999999963 2345677888999999999999999999876
Q ss_pred cccc--------C---CCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC---
Q 002768 417 EMTK--------E---SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--- 482 (883)
Q Consensus 417 ~~~~--------~---~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--- 482 (883)
+.+. + ..|++|+|+|+++++||||+|++++|++|+++||+|+|+|||++.+|.++|+++|+..+..
T Consensus 536 ~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~ 615 (997)
T TIGR01106 536 DEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETV 615 (997)
T ss_pred cccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccch
Confidence 4321 1 1278999999999999999999999999999999999999999999999999999964321
Q ss_pred -------------------CCCcccCCCCCCCCcccHHHHHHhcC--cEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCC
Q 002768 483 -------------------PSSSLLGRDKDENEALPVDELIEEAD--GFAGVFPEHKYEIVKILQEKKHVVGMTGDGVND 541 (883)
Q Consensus 483 -------------------~~~~l~g~~~~~~~~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvND 541 (883)
...+++|.+++.++++++++.+++.+ ||||++|+||+++|+.||++|++|+|+|||+||
T Consensus 616 ~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND 695 (997)
T TIGR01106 616 EDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVND 695 (997)
T ss_pred hhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCccc
Confidence 02478999999999999999998876 999999999999999999999999999999999
Q ss_pred HHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH-------HH---HHHHH--HhhcCC
Q 002768 542 APALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-------LG---FVLLA--LIWEYD 608 (883)
Q Consensus 542 apALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~-------~~---~~~~~--~~~~~~ 608 (883)
+||||+|||||||| +|+|+||++||+||+||||++|+++|++||++|+|++|++ +. .+++. +..+.|
T Consensus 696 ~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~p 775 (997)
T TIGR01106 696 SPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANIPLP 775 (997)
T ss_pred HHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCcch
Confidence 99999999999999 7999999999999999999999999999999999999988 11 11111 223457
Q ss_pred CChHHHHHHHHHhhhhh-cccccCCCCC------CCCCCc--cchHHHHHHH-HHHHHHHHHHHHHHHHHHHhc-ccccc
Q 002768 609 FPPFMVLIIAILNDGTI-MTISKDRVKP------SPRPDS--WKLNEIFATG-IVIGTYLALVTVLFYWVVVDT-DFFET 677 (883)
Q Consensus 609 ~~~~~il~i~~~~d~~~-~~l~~d~~~~------~~~p~~--~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~-~~~~~ 677 (883)
++|+|++|+|+++|+++ +++++|++.+ |+.|+. ...+.++..+ +..|+++++..+++|++.+.. +|...
T Consensus 776 l~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~ 855 (997)
T TIGR01106 776 LGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPL 855 (997)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 88999999999999974 8999887643 222221 2223344443 456888888888776654421 11100
Q ss_pred -cccc---------ccCCCC------------hHHHHHHHHHHHHHHHHHH-HHHHhcCCCccc--cchhHHHHHHHHHH
Q 002768 678 -HFHV---------KSLSSN------------SEEVSSALYLQVSIISQAL-IFVTRSQSWSFL--ERPGALLMCAFVVA 732 (883)
Q Consensus 678 -~~~~---------~~~~~~------------~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~--~~~~~~l~~~~~~~ 732 (883)
.++. .+..+. .....++++|...+++|++ .+++|+++.+++ ..++.+++.++++.
T Consensus 856 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~ 935 (997)
T TIGR01106 856 HLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEE 935 (997)
T ss_pred cccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHH
Confidence 0110 000000 0014577888888999976 799999765533 23455565555544
Q ss_pred HHHHHHHHHhhc-ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 002768 733 QLVATLIAVYAH-ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYA 782 (883)
Q Consensus 733 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~ 782 (883)
.++..++.+... ..++.+.+++|.+|+.+++++++.++..++.|++.|++
T Consensus 936 ~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 936 TALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred HHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 444333332221 34567888999999999999999998999999887653
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-117 Score=1101.69 Aligned_cols=767 Identities=22% Similarity=0.333 Sum_probs=611.6
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANG------GGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAH 75 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~------~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~ 75 (883)
++++|+.|+++|++|++++|+++++++++++.. .++..+|.++++|+++++++..+++++|++++++.++|++.
T Consensus 83 ~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~ 162 (941)
T TIGR01517 83 PKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNRE 162 (941)
T ss_pred CCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhc
Confidence 357899999999999999999999999998632 12234899999999999999999999999999999999864
Q ss_pred -CCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCe--eeeeeeE
Q 002768 76 -LAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADE--VFSGSTC 152 (883)
Q Consensus 76 -~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~--v~aGs~v 152 (883)
.+++++|+|||++++|+++||||||+|.+++||+|||||+|++|+.+.||| |+|||||.|+.|++|+. +|+||.|
T Consensus 163 ~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdE--S~LTGES~pv~K~~~~~n~v~~GT~v 240 (941)
T TIGR01517 163 KSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDE--SSITGESDPIKKGAPKDSFLLSGTVV 240 (941)
T ss_pred cCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEe--cccCCCCCcccccCCCCceEEeCCeE
Confidence 478999999999999999999999999999999999999999997789999 99999999999998876 9999999
Q ss_pred eeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHh---Hhhcc---c---------
Q 002768 153 KHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIV---MFPIQ---H--------- 217 (883)
Q Consensus 153 ~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~---~~~~~---~--------- 217 (883)
.+|+++++|++||.+|++||+++++.+++.++|+|+.++++++++...+++.+++.+++ .+... +
T Consensus 241 ~~G~~~~iV~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (941)
T TIGR01517 241 NEGSGRMLVTAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDA 320 (941)
T ss_pred EeeEEEEEEEEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhh
Confidence 99999999999999999999999998876778999999998877543222211111111 11111 1
Q ss_pred CchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEE
Q 002768 218 RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIE 297 (883)
Q Consensus 218 ~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 297 (883)
.++.+.+..++++++++|||+||++++++++.++.+|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..
T Consensus 321 ~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~ 400 (941)
T TIGR01517 321 QTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIG 400 (941)
T ss_pred HHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEe
Confidence 24567788889999999999999999999999999999999999999999999999999999999999999999987643
Q ss_pred ec--c-CC----CC--hHHHHHHHHHH-hcc-----------ccCChHHHHHHHHhC----ChHHHhhcccEeEeecCCC
Q 002768 298 VF--N-RN----MD--KDMIVLLAARA-ARL-----------ENQDAIDAAIINMLA----DPKEARANIKEVHFLPFNP 352 (883)
Q Consensus 298 ~~--~-~~----~~--~~~~l~~a~~~-~~~-----------~~~~~~~~ai~~~~~----~~~~~~~~~~~l~~~pF~~ 352 (883)
.. . .+ .+ ..+++..++.+ +.. ..+||+|.|++.++. +..+.+..++.++.+||+|
T Consensus 401 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s 480 (941)
T TIGR01517 401 EQRFNVRDVLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNS 480 (941)
T ss_pred cceEecCcccccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCC
Confidence 11 0 00 01 11223333332 221 125899999998763 3333445677888999999
Q ss_pred CCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhcc----------HHHHHHHHHHHHHHHhcCCeEeEEeeeccccccc--
Q 002768 353 VDKRTAITYIDSDGNWYRASKGAPEQILNLCKEK----------KEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTK-- 420 (883)
Q Consensus 353 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~----------~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~-- 420 (883)
.+|||+++++..+++++.++|||||.++++|+.. .+.++++++.+++++++|+|++++||++++..+.
T Consensus 481 ~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~ 560 (941)
T TIGR01517 481 ERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPR 560 (941)
T ss_pred CCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccc
Confidence 9999999988766778899999999999999641 0235678888999999999999999998754322
Q ss_pred -CCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCccc
Q 002768 421 -ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALP 499 (883)
Q Consensus 421 -~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~ 499 (883)
+..|++|+|+|+++++||||+|++++|++||++||+|+|+||||+.||.++|++|||.++ +..+++|.+++.+.+++
T Consensus 561 ~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~--~~~vi~G~~~~~l~~~e 638 (941)
T TIGR01517 561 KDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF--GGLAMEGKEFRRLVYEE 638 (941)
T ss_pred ccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCC--CceEeeHHHhhhCCHHH
Confidence 234789999999999999999999999999999999999999999999999999999754 24688999999999999
Q ss_pred HHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHH
Q 002768 500 VDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLSVII 578 (883)
Q Consensus 500 ~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~ 578 (883)
+++++++.++|||++|+||+++|+.||++|++|+|||||+||+||||+|||||||| +|+|+|+++||++|++|+|++|+
T Consensus 639 l~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~ 718 (941)
T TIGR01517 639 MDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIV 718 (941)
T ss_pred HHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-------HHHH-----HHHhhcCCCChHHHHHHHHHhhhh-hcccccCCCCCC---CCCCc-
Q 002768 579 SAVLTSRAIFQRMKNYTL-------GFVL-----LALIWEYDFPPFMVLIIAILNDGT-IMTISKDRVKPS---PRPDS- 641 (883)
Q Consensus 579 ~ai~~gR~~~~~i~~~~~-------~~~~-----~~~~~~~~~~~~~il~i~~~~d~~-~~~l~~d~~~~~---~~p~~- 641 (883)
.++++||++|+||+|++. ..++ ..+.+.++++|+|++|+|+++|++ ++++++|++.+. ++|.+
T Consensus 719 ~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~ 798 (941)
T TIGR01517 719 RAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGR 798 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCC
Confidence 999999999999999871 1111 122245689999999999999986 488888876432 12222
Q ss_pred ---cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HHHHhcCCC-c
Q 002768 642 ---WKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IFVTRSQSW-S 716 (883)
Q Consensus 642 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~-~ 716 (883)
...+.++..++++|+++++.+++++++... ++... +............++++|.+.+++|.+ .+++|+.+. +
T Consensus 799 ~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~ 875 (941)
T TIGR01517 799 NAPLISRSMWKNILGQAGYQLVVTFILLFAGGS--IFDVS-GPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERN 875 (941)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhccc-CcccccccccchhhHHHHHHHHHHHHHHHHHHccCCccc
Confidence 223456777888899988888777665431 11100 000000001234556777777777764 789988543 2
Q ss_pred -c---ccchhHHHHHHHHHHHHHHHHHHHhhcccccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002768 717 -F---LERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFI 778 (883)
Q Consensus 717 -~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 778 (883)
| ++| .+++.++.+..++..++..+. ..++++.+++|..|+.+++++++.+++.++.|++
T Consensus 876 ~~~~~~~n--~~~~~~~~~~~~l~~~~~~~~-~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 876 VFEGLFKN--RIFVTIMGFTFGFQVIIVEFG-GSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLI 938 (941)
T ss_pred cccccccc--HHHHHHHHHHHHHHHHHHHHH-HHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2 233 344443333333322222222 3455778889999999899999888888888875
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-116 Score=1083.98 Aligned_cols=767 Identities=28% Similarity=0.401 Sum_probs=610.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC
Q 002768 9 FLSFMWNPLSWVMEAAAVMAIVLANGG---GQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE 85 (883)
Q Consensus 9 ~l~~~~~~~~~~l~~aail~~~~~~~~---~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 85 (883)
|++||++|++++|+++++++++++... ....+|.++++|++++++|+.++++||+++++++++|+++.+++++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 578999999999999999999986432 12258999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC-------------CeeeeeeeE
Q 002768 86 GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA-------------DEVFSGSTC 152 (883)
Q Consensus 86 g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g-------------~~v~aGs~v 152 (883)
|++++|+++||||||+|.|++||+|||||+|++|+.+.||| |+|||||.|+.|.++ +++|+||.|
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~Vde--S~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQ--SILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecceEEEc--ccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 99999999999999999999999999999999998889999 999999999999876 789999999
Q ss_pred eeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-----ccCch----HH
Q 002768 153 KHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPI-----QHRSY----RD 222 (883)
Q Consensus 153 ~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~-----~~~~~----~~ 222 (883)
.+|+++++|++||.+|++||+++++.+. ++++|+|+.+++++.++...+++.+++.+++.+.. ...+| ..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 9999999999999999999999998876 66899999999998876443332222222211110 11122 22
Q ss_pred HHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe----
Q 002768 223 GINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV---- 298 (883)
Q Consensus 223 ~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~---- 298 (883)
.+..++++++++|||+||++++++++.|+++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++...
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 3445678899999999999999999999999999999999999999999999999999999999999999876421
Q ss_pred -------ccCCCC-------------------hHHHHHHHHHHhcc------------ccCChHHHHHHHHhCChH----
Q 002768 299 -------FNRNMD-------------------KDMIVLLAARAARL------------ENQDAIDAAIINMLADPK---- 336 (883)
Q Consensus 299 -------~~~~~~-------------------~~~~l~~a~~~~~~------------~~~~~~~~ai~~~~~~~~---- 336 (883)
.+.+++ .+.++..++.|+.. ..+||.|.|++.++.+..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~ 398 (917)
T TIGR01116 319 SLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPAT 398 (917)
T ss_pred ccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCch
Confidence 000010 12234445555431 125899999987643210
Q ss_pred ----------------HHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhc-----------cHHH
Q 002768 337 ----------------EARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE-----------KKEI 389 (883)
Q Consensus 337 ----------------~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~ 389 (883)
..+..++.++.+||||.+|||++++++ ++++++++|||||.|+++|+. +++.
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~-~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~ 477 (917)
T TIGR01116 399 KNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKP-STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKM 477 (917)
T ss_pred hcccccccccccchhHHHHhhcceeeecccChhhCeEEEEEee-CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHH
Confidence 124567789999999999999999875 467889999999999999963 1345
Q ss_pred HHHHHHHHHHHHh-cCCeEeEEeeecccccc----------cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEE
Q 002768 390 AVKVHTIIDKFAE-RGLRSLAVAIQEVSEMT----------KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVK 458 (883)
Q Consensus 390 ~~~~~~~~~~~a~-~G~R~l~vA~~~~~~~~----------~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~ 458 (883)
++++.+.+++|++ +|+||+++||+.+++.. .+..|++|+|+|+++++||||+|++++|++||++||+++
T Consensus 478 ~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~ 557 (917)
T TIGR01116 478 KNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVI 557 (917)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEE
Confidence 6778889999999 99999999999986421 134588999999999999999999999999999999999
Q ss_pred EEccCcHHHHHHHHHHcCCCCCCC--CCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEc
Q 002768 459 MITGDQLAIAKETGRRLGMATNMY--PSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTG 536 (883)
Q Consensus 459 miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~G 536 (883)
|+|||+..||.++|+++|+..+.. ....++|.+++.+++++..+.+.+..+|||++|+||.++|+.+|++|++|+|+|
T Consensus 558 miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iG 637 (917)
T TIGR01116 558 MITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTG 637 (917)
T ss_pred EecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEec
Confidence 999999999999999999975322 124678888888888888888888899999999999999999999999999999
Q ss_pred CCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH-------HH---HHHH--HHh
Q 002768 537 DGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT-------LG---FVLL--ALI 604 (883)
Q Consensus 537 DGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~-------~~---~~~~--~~~ 604 (883)
||+||+||||+||||||||+|+|+||++||+++.+|||++|++++++||++|+|++|++ +. ..++ .+.
T Consensus 638 DG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~ 717 (917)
T TIGR01116 638 DGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG 717 (917)
T ss_pred CCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999987 11 1111 223
Q ss_pred hcCCCChHHHHHHHHHhhhhh-cccccCCCCC------CCCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccc
Q 002768 605 WEYDFPPFMVLIIAILNDGTI-MTISKDRVKP------SPRPD-SWKLNEIFATGIVIGTYLALVTVLFYWVVVDT-DFF 675 (883)
Q Consensus 605 ~~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~------~~~p~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~ 675 (883)
++.+|+|+|++|+|+++|+++ ++++++++.+ |+.+. +...++++..+++.|+++++.+++.|++.+.. .+.
T Consensus 718 ~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 797 (917)
T TIGR01116 718 IPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFT 797 (917)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 457899999999999999875 7888876533 22222 22345678888999999998877666554321 111
Q ss_pred ccc--c--ccccCCC------ChHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccc---chhHHHHHHHHHHHHHHHHHHH
Q 002768 676 ETH--F--HVKSLSS------NSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLE---RPGALLMCAFVVAQLVATLIAV 741 (883)
Q Consensus 676 ~~~--~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~ 741 (883)
... . +..+..+ .....+.+++|.+.+++|+. .|++|+++.++++ .++.+++.++++..++. ++.+
T Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~-~~~~ 876 (917)
T TIGR01116 798 GCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALH-FLIL 876 (917)
T ss_pred cccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHH-HHHH
Confidence 100 0 0000000 01234567888888899975 7999997655432 12444544444333322 2222
Q ss_pred hhc--ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 742 YAH--ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIV 779 (883)
Q Consensus 742 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 779 (883)
|.+ ..++++.|++|..|+++++++++.++..+++|++.
T Consensus 877 ~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 877 YVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 221 24567889999999999999999999999999775
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-116 Score=995.22 Aligned_cols=769 Identities=23% Similarity=0.328 Sum_probs=598.4
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCe
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG-QGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMA-HLAPK 79 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~-~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~-~~~~~ 79 (883)
++++|+-.++.+.+.-.++|++||++|+.+++... -+..|++++.|++.+++..++..+.+|+.++....|.+ ....+
T Consensus 142 ~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k 221 (1034)
T KOG0204|consen 142 PKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIK 221 (1034)
T ss_pred CccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceE
Confidence 35788888888889999999999999999987543 35689999988876554333344444444444444432 33567
Q ss_pred eEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccC--CCeeeeeeeEeeCce
Q 002768 80 TKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKT--ADEVFSGSTCKHGEI 157 (883)
Q Consensus 80 ~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~--g~~v~aGs~v~~G~~ 157 (883)
..|+|||+.++|+..|||||||+.|+.||.|||||++++|++|.+|| |++||||.++.|.+ ..+++|||.+.+|.+
T Consensus 222 ~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDE--SSlTGESd~v~k~~~~dPfLlSGTkv~eGsg 299 (1034)
T KOG0204|consen 222 FQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDE--SSLTGESDHVQKSLDKDPFLLSGTKVMEGSG 299 (1034)
T ss_pred EEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEec--ccccCCCcceeccCCCCCeEeecceeecCcc
Confidence 89999999999999999999999999999999999999999999999 99999999999987 468999999999999
Q ss_pred EEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHH---HHHHHHHHHHHHhHhhcc-----cC---ch----H
Q 002768 158 EAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCI---CSIAVGMILEIIVMFPIQ-----HR---SY----R 221 (883)
Q Consensus 158 ~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~---~~i~i~~~~~~~~~~~~~-----~~---~~----~ 221 (883)
+++|+++|++|+.|++..++... +.++|+|-.+++++...- ..++...++.++..|... +. .+ .
T Consensus 300 kMlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~ 379 (1034)
T KOG0204|consen 300 KMLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYI 379 (1034)
T ss_pred eEEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHH
Confidence 99999999999999999999887 588999988888765421 111111122222222221 11 11 1
Q ss_pred HHHH----HHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEE
Q 002768 222 DGIN----NLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIE 297 (883)
Q Consensus 222 ~~~~----~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~ 297 (883)
+.+. ..+.++++++|+|||+++++++|+++++|.+.+.+||+++|+|+||+.++||+|||||||+|+|+|.+.++.
T Consensus 380 ~~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~ 459 (1034)
T KOG0204|consen 380 QEFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIG 459 (1034)
T ss_pred HHHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeec
Confidence 1222 233567889999999999999999999999999999999999999999999999999999999999997763
Q ss_pred eccCC--------CChHH--HHH-HHHHHhc-------------cccCChHHHHHHHHh----CChHHHhhcccEeEeec
Q 002768 298 VFNRN--------MDKDM--IVL-LAARAAR-------------LENQDAIDAAIINML----ADPKEARANIKEVHFLP 349 (883)
Q Consensus 298 ~~~~~--------~~~~~--~l~-~a~~~~~-------------~~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~p 349 (883)
..... .++.. ++. -.+.++. ...++|.++|++++. .+.+..|...+.++++|
T Consensus 460 ~~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~ 539 (1034)
T KOG0204|consen 460 SEHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYP 539 (1034)
T ss_pred cccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEec
Confidence 22211 22211 111 1111111 012479999998874 35667788889999999
Q ss_pred CCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhc-----------cHHHHHHHHHHHHHHHhcCCeEeEEeeeccccc
Q 002768 350 FNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE-----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEM 418 (883)
Q Consensus 350 F~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~ 418 (883)
|||.+|+|+++++.++|..|.++|||+|.++..|+. +++.+..+++.++.||++|+|++|+||++..+.
T Consensus 540 FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~ 619 (1034)
T KOG0204|consen 540 FNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAG 619 (1034)
T ss_pred cCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccC
Confidence 999999999999977776349999999999999975 244566889999999999999999999984332
Q ss_pred -------c-cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCC
Q 002768 419 -------T-KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGR 490 (883)
Q Consensus 419 -------~-~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~ 490 (883)
+ .+..+++++++|+++++||.|||++++|+.|++|||+|.|+||||..||++||.+|||.++..+-..++|.
T Consensus 620 ~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~ 699 (1034)
T KOG0204|consen 620 PDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGK 699 (1034)
T ss_pred CCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecch
Confidence 1 23567899999999999999999999999999999999999999999999999999999887667899999
Q ss_pred CCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEee
Q 002768 491 DKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVL 569 (883)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL 569 (883)
++++.++++.++++++.+|+||.+|.||+-+|+.|+++||+||.||||.||+||||+||||.||| .|||+|||+|||||
T Consensus 700 eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 700 EFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIII 779 (1034)
T ss_pred hhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHhhcCCCChHHHHHHHHHhhhh-hcccccCCCCC-
Q 002768 570 TEPGLSVIISAVLTSRAIFQRMKNYT------------LGFVLLALIWEYDFPPFMVLIIAILNDGT-IMTISKDRVKP- 635 (883)
Q Consensus 570 ~~~~~~~i~~ai~~gR~~~~~i~~~~------------~~~~~~~~~~~~~~~~~~il~i~~~~d~~-~~~l~~d~~~~- 635 (883)
+||||++|+++++|||.+|+||+||+ +.|+.....-..|++.+|+||+|+++|.+ ++++++|++.+
T Consensus 780 ~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~ 859 (1034)
T KOG0204|consen 780 LDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDE 859 (1034)
T ss_pred EcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChH
Confidence 99999999999999999999999998 22333333346789999999999999998 49999987643
Q ss_pred ------CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHH-HH
Q 002768 636 ------SPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQAL-IF 708 (883)
Q Consensus 636 ------~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~ 708 (883)
-.|..+...+-++...+.+++|+.++.+.+.+... .. |+.+...++.+..+.++.|...+++|.+ =+
T Consensus 860 Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~--~i----f~~~~~~~~~~~~~nTiIFNtFV~~qvFNEi 933 (1034)
T KOG0204|consen 860 LMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGK--SI----FGLNGPLHSPPSVHNTIIFNTFVFCQVFNEI 933 (1034)
T ss_pred HhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcch--hh----hccCCCCCCchhhheeeehhHHHHHHHHHHH
Confidence 22334444456777778889999888776655443 12 2222222234455667777888888865 47
Q ss_pred HHhcCC-Ccccc-chhHHHHHHHHHHHHHHHHHHHhhcccccccCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002768 709 VTRSQS-WSFLE-RPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFI 778 (883)
Q Consensus 709 ~~r~~~-~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 778 (883)
+.|.-. .+.|. .-..+++++++.+.++..++.+.....|+...+++|..|+++..+.++.+..-.+.|.+
T Consensus 934 naRki~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~i 1005 (1034)
T KOG0204|consen 934 NARKIDERNVFKGIFRNRLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCI 1005 (1034)
T ss_pred hhcchhHHhHHHHHhcCceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheec
Confidence 777632 22221 00111222222222333333333233456789999999988888887777666555544
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-107 Score=1016.07 Aligned_cols=702 Identities=21% Similarity=0.269 Sum_probs=549.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK 81 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~ 81 (883)
++++|+.|+++|++|+.+++++++++++.- .+|.++++|+++++++..+++++++++.++++++.. .+++++
T Consensus 161 ~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~-------~~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~ 232 (1054)
T TIGR01657 161 VPSFLELLKEEVLHPFYVFQVFSVILWLLD-------EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVI 232 (1054)
T ss_pred CCCHHHHHHHHHhchHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEE
Confidence 358899999999999999999887776653 478999999999999999999999999999888754 578999
Q ss_pred EEECCeEEEEEccCcCCCcEEEEe--CCCeecccEEEEeeCCeeEeccccccCCccccccccCC----------------
Q 002768 82 VLREGQWKEQDAAVLVPGDIISIK--LGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---------------- 143 (883)
Q Consensus 82 V~Rdg~~~~i~~~~Lv~GDiv~l~--~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---------------- 143 (883)
|+|||+|++|+++||||||+|.|+ +||+|||||+|++|+ +.||| |+|||||.|+.|.+.
T Consensus 233 V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~g~-~~VdE--S~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~ 309 (1054)
T TIGR01657 233 VIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGS-CIVNE--SMLTGESVPVLKFPIPDNGDDDEDLFLYETS 309 (1054)
T ss_pred EEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEeCc-EEEec--ccccCCccceecccCCccccccccccccccc
Confidence 999999999999999999999999 999999999999996 69999 999999999999862
Q ss_pred --CeeeeeeeEee-------CceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Q 002768 144 --DEVFSGSTCKH-------GEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMF 213 (883)
Q Consensus 144 --~~v~aGs~v~~-------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~ 213 (883)
+++|+||.|.+ |.+.++|++||.+|..|++.+++... +..+++++...++..++++..+++.+. .++..
T Consensus 310 ~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~-~~~~~ 388 (1054)
T TIGR01657 310 KKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIY-TIIEL 388 (1054)
T ss_pred cceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 25999999985 78999999999999999999988766 556788888877766543322222222 11122
Q ss_pred hcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeE
Q 002768 214 PIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDR 293 (883)
Q Consensus 214 ~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~ 293 (883)
...+.++...+..++.+++++||++||++++++++.|+.||+|+|++||++.++|++|++|++|||||||||+|+|+|.+
T Consensus 389 ~~~~~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~ 468 (1054)
T TIGR01657 389 IKDGRPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRG 468 (1054)
T ss_pred HHcCCcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEe
Confidence 22356788889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEEeccCC----------CChHHHHHHHHHHhcc------ccCChHHHHHHHHhCCh----HH--H-------------
Q 002768 294 NLIEVFNRN----------MDKDMIVLLAARAARL------ENQDAIDAAIINMLADP----KE--A------------- 338 (883)
Q Consensus 294 ~~i~~~~~~----------~~~~~~l~~a~~~~~~------~~~~~~~~ai~~~~~~~----~~--~------------- 338 (883)
++....... .....++...+.|... ..+||+|.|++.+.+.. .. .
T Consensus 469 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 548 (1054)
T TIGR01657 469 VQGLSGNQEFLKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDP 548 (1054)
T ss_pred EecccCccccccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCC
Confidence 753211000 0112223333333321 23799999999975311 00 0
Q ss_pred hhcccEeEeecCCCCCceEEEEEEcC-CCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccc
Q 002768 339 RANIKEVHFLPFNPVDKRTAITYIDS-DGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE 417 (883)
Q Consensus 339 ~~~~~~l~~~pF~~~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~ 417 (883)
...++.++.+||+|.+|||+++++.. +++.+.++|||||.|+++|+.. ..++++++.+++|+++|+||||+||+++++
T Consensus 549 ~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~-~~p~~~~~~~~~~a~~G~RVLalA~k~l~~ 627 (1054)
T TIGR01657 549 PQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE-TVPSDYQEVLKSYTREGYRVLALAYKELPK 627 (1054)
T ss_pred CceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc-CCChhHHHHHHHHHhcCCEEEEEEEeecCc
Confidence 14577889999999999999999864 3567899999999999999853 346778889999999999999999999863
Q ss_pred c--------ccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCC------
Q 002768 418 M--------TKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYP------ 483 (883)
Q Consensus 418 ~--------~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~------ 483 (883)
. +++..|++|+|+|+++|+||+|||++++|++|+++||+|+|+||||+.||.++|+++||..+...
T Consensus 628 ~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~ 707 (1054)
T TIGR01657 628 LTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEA 707 (1054)
T ss_pred cchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeec
Confidence 2 23456899999999999999999999999999999999999999999999999999999643210
Q ss_pred ---------------------------------------------CCcccCCCCCC---CCcccHHHHHHhcCcEEEeCh
Q 002768 484 ---------------------------------------------SSSLLGRDKDE---NEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 484 ---------------------------------------------~~~l~g~~~~~---~~~~~~~~~~~~~~vfar~~P 515 (883)
..+++|++++. ..++++.+++++..||||++|
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP 787 (1054)
T TIGR01657 708 EPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAP 787 (1054)
T ss_pred ccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCH
Confidence 01222322221 233467788889999999999
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 516 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
+||.++|+.||+.|++|+|||||+||+||||+|||||||+++ |++ .|||+++.+|+|++|+++|++||+++.|+++..
T Consensus 788 ~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-das-~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~ 865 (1054)
T TIGR01657 788 DQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-EAS-VAAPFTSKLASISCVPNVIREGRCALVTSFQMF 865 (1054)
T ss_pred HHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-cce-eecccccCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999865 555 799999999999999999999999999987643
Q ss_pred ----------HHHHHHHHhhcCCCChHHHHHHHHHhhhhh-cccccCCCCCC---CCCCc-cchHHHHHHHHHHHHHHHH
Q 002768 596 ----------LGFVLLALIWEYDFPPFMVLIIAILNDGTI-MTISKDRVKPS---PRPDS-WKLNEIFATGIVIGTYLAL 660 (883)
Q Consensus 596 ----------~~~~~~~~~~~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~~---~~p~~-~~~~~~~~~~~~~g~~~~~ 660 (883)
+..+.+......+++++|++|++++.+.++ ++++.+++.+. .+|.. ......+...+.++++..+
T Consensus 866 ~~~~~~~~~~~~~~~~l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~~~l~~~~~~~si~~q~~i~~~ 945 (1054)
T TIGR01657 866 KYMALYSLIQFYSVSILYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPPSNLFSVYILTSVLIQFVLHIL 945 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCCccccCHHHHHHHHHHHHHHHH
Confidence 111122223457899999999999999885 78887766432 23433 3334566666777888888
Q ss_pred HHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 002768 661 VTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVTRSQSWSFL 718 (883)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~r~~~~~~~ 718 (883)
..++.|++.....|+..................++.|.++.+.++..+..++.+.+|.
T Consensus 946 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~~~~~~~~~~~~~~g~pf~ 1003 (1054)
T TIGR01657 946 SQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLFFVSSFQYLITAIVNSKGPPFR 1003 (1054)
T ss_pred HHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHHHHHHHHHHHheEEEcCCcchh
Confidence 7777776665444432111100000011223344445555566666777777655543
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-107 Score=915.98 Aligned_cols=778 Identities=22% Similarity=0.372 Sum_probs=625.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CCCCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG-----QGPDW-QDFVGIVCLLLINSTISFIEENNAGNAAAALMAHL 76 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~-----~~~~~-~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~ 76 (883)
.+.|.+|++|+++-+.++++++++++++.+...- .+.+- +-++++..++++..+..|+||.+..+-+++.+++.
T Consensus 82 t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~ 161 (1019)
T KOG0203|consen 82 TPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLV 161 (1019)
T ss_pred ChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccc
Confidence 3689999999999999999999999998653211 11121 22334445566778899999999999999999999
Q ss_pred CCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC----------Cee
Q 002768 77 APKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA----------DEV 146 (883)
Q Consensus 77 ~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g----------~~v 146 (883)
|+.+.|+|||+...+.++|||+||+|.++-||+||||.|++++.++++|+ |+|||||.|..+++. |+.
T Consensus 162 P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdn--sslTGesEP~~~~~~~t~~~~~Et~Ni~ 239 (1019)
T KOG0203|consen 162 PQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDN--SSLTGESEPQTRSPEFTHENPLETRNIA 239 (1019)
T ss_pred hhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecceeEec--cccccccCCccCCccccccCchhheeee
Confidence 99999999999999999999999999999999999999999999999999 999999999998763 679
Q ss_pred eeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHH
Q 002768 147 FSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGIN 225 (883)
Q Consensus 147 ~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~ 225 (883)
|.+|.+.+|.++++|++||.+|.+|+|+.+...- ..++|+++.++++..+..... +.+.+.++..-...++.|..++.
T Consensus 240 f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vA-i~~~i~fF~~~~~~gy~~l~avv 318 (1019)
T KOG0203|consen 240 FFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVA-IFLGISFFILALILGYEWLRAVV 318 (1019)
T ss_pred eeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHH-HHHHHHHHHHHHhhcchhHHHhh
Confidence 9999999999999999999999999999988764 778899999988876643322 22222222122223678888888
Q ss_pred HHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccC----
Q 002768 226 NLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR---- 301 (883)
Q Consensus 226 ~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~---- 301 (883)
.++.++++.+|++||..++++++.-++||+++++++|++.++|+||+.++||+|||||||+|+|+|.+.+....-.
T Consensus 319 ~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~ 398 (1019)
T KOG0203|consen 319 FLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADT 398 (1019)
T ss_pred hhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeec
Confidence 8999999999999999999999999999999999999999999999999999999999999999999887531100
Q ss_pred ------------CCChHHHHHHHHHHhcc---------------ccCChHHHHHHHHh----CChHHHhhcccEeEeecC
Q 002768 302 ------------NMDKDMIVLLAARAARL---------------ENQDAIDAAIINML----ADPKEARANIKEVHFLPF 350 (883)
Q Consensus 302 ------------~~~~~~~l~~a~~~~~~---------------~~~~~~~~ai~~~~----~~~~~~~~~~~~l~~~pF 350 (883)
+..-..+..++..|++. ..+|+.+.|++++. ++..+.|...+.+..+||
T Consensus 399 ~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipf 478 (1019)
T KOG0203|consen 399 TEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPF 478 (1019)
T ss_pred hhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCc
Confidence 01112345555555432 23578899988864 445677888899999999
Q ss_pred CCCCceEEEEEEcC---CCcEEEEEcCcHHHHHhhhhc----------cHHHHHHHHHHHHHHHhcCCeEeEEeeecccc
Q 002768 351 NPVDKRTAITYIDS---DGNWYRASKGAPEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE 417 (883)
Q Consensus 351 ~~~~k~~sv~~~~~---~g~~~~~~KGa~e~il~~c~~----------~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~ 417 (883)
||.+|+.-.+.... +.+..+..|||||.++++|+. ++...+.+++...++...|-||+++++..+++
T Consensus 479 NSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~ 558 (1019)
T KOG0203|consen 479 NSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPD 558 (1019)
T ss_pred ccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcch
Confidence 99999987777643 357788999999999999974 34667788888999999999999999999876
Q ss_pred ccc-----------CCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----
Q 002768 418 MTK-----------ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY---- 482 (883)
Q Consensus 418 ~~~-----------~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---- 482 (883)
.+. .-.-.+|.|+|++++.||||..+|+++.+||++||+|+|+||||+.||+++|+++||..+..
T Consensus 559 ~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e 638 (1019)
T KOG0203|consen 559 EKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVE 638 (1019)
T ss_pred hcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhh
Confidence 432 12346799999999999999999999999999999999999999999999999999754211
Q ss_pred ------------------CCCcccCCCCCCCCcccHHHHHHhcC--cEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCH
Q 002768 483 ------------------PSSSLLGRDKDENEALPVDELIEEAD--GFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDA 542 (883)
Q Consensus 483 ------------------~~~~l~g~~~~~~~~~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDa 542 (883)
..-++.|.|+.+++.+++++++.+.. ||||.||+||+.||+.+|++|.+|+.||||+||+
T Consensus 639 ~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDs 718 (1019)
T KOG0203|consen 639 DIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDS 718 (1019)
T ss_pred hhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCC
Confidence 12357899999999999999999887 9999999999999999999999999999999999
Q ss_pred HhhhhCCeeEEec-cccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH----------H--HHHHHHHhhcCCC
Q 002768 543 PALKKADIGIAVA-DATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----------L--GFVLLALIWEYDF 609 (883)
Q Consensus 543 pALk~AdVGIam~-~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~----------~--~~~~~~~~~~~~~ 609 (883)
||||+|||||||| .|+|++|+|||+||+||||++|+..|++||-+|+|+||.+ + +++.+.+.++.++
T Consensus 719 PALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLpl 798 (1019)
T KOG0203|consen 719 PALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLPL 798 (1019)
T ss_pred hhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCccc
Confidence 9999999999999 9999999999999999999999999999999999999966 1 2233444567778
Q ss_pred ChHHHHHHHHHhhhhh-cccccCCC------CCCCCCCc--cchHHHHHH-HHHHHHHHHHHHHHHHHHHH-hccccccc
Q 002768 610 PPFMVLIIAILNDGTI-MTISKDRV------KPSPRPDS--WKLNEIFAT-GIVIGTYLALVTVLFYWVVV-DTDFFETH 678 (883)
Q Consensus 610 ~~~~il~i~~~~d~~~-~~l~~d~~------~~~~~p~~--~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~-~~~~~~~~ 678 (883)
.++.+|.|.+.+|..| ++++|+.. ++|+.|.. .-+++++.+ ++.+|+++++..|+.|+..+ .++|++..
T Consensus 799 gtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~ 878 (1019)
T KOG0203|consen 799 GTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRT 878 (1019)
T ss_pred chhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 8999999999999986 89999865 23334433 334555544 57889999999997766554 45665532
Q ss_pred c----------ccccCCCCh------H------HHHHHHHHHHHHHHHHH-HHHHhcCCCcc--ccchhHHHHHHHHHHH
Q 002768 679 F----------HVKSLSSNS------E------EVSSALYLQVSIISQAL-IFVTRSQSWSF--LERPGALLMCAFVVAQ 733 (883)
Q Consensus 679 ~----------~~~~~~~~~------~------~~~~~~~~~~~~~~~~~-i~~~r~~~~~~--~~~~~~~l~~~~~~~~ 733 (883)
. +++++.++. + ....+.||...+..|+. ++.+.+++-+. .+..|+.+.+++++-.
T Consensus 879 L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~ 958 (1019)
T KOG0203|consen 879 LVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFET 958 (1019)
T ss_pred HHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHH
Confidence 1 112222221 1 12334455556677764 55555555443 3456788888888777
Q ss_pred HHHHHHHHhhc-ccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 002768 734 LVATLIAVYAH-ISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVRYAL 783 (883)
Q Consensus 734 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~ 783 (883)
++++++++... ...+++.|+.|.||+..+.++++.|+.+|++|++.|.+=
T Consensus 959 ~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~P 1009 (1019)
T KOG0203|consen 959 CLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRYP 1009 (1019)
T ss_pred HHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhCC
Confidence 77666654432 223468899999999999999999999999999998653
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-98 Score=878.98 Aligned_cols=526 Identities=24% Similarity=0.373 Sum_probs=438.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCh--hhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhccCCC-eeE
Q 002768 11 SFMWNPLSWVMEAAAVMAIVLANGGG--QGPDW--QDFVGIVCLLLINSTISFIE----ENNAGNAAAALMAHLAP-KTK 81 (883)
Q Consensus 11 ~~~~~~~~~~l~~aail~~~~~~~~~--~~~~~--~~~~~i~~~~li~~~i~~~~----e~~a~~~~~~L~~~~~~-~~~ 81 (883)
.+|+||+.|+++++++++++++.... ....| ...+.|+++++++.+++.++ |+|+++++++|+++.++ +++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~ 107 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKAR 107 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEE
Confidence 57899999999999999998863211 01122 34667777777777777777 78999999999999887 786
Q ss_pred -EEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC---CeeeeeeeEeeCce
Q 002768 82 -VLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---DEVFSGSTCKHGEI 157 (883)
Q Consensus 82 -V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---~~v~aGs~v~~G~~ 157 (883)
|.|||++++|++++|+|||+|.+++||+|||||++++|+. .||| |+|||||.||.|++| +.+|+||.+.+|++
T Consensus 108 ~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~~-~VDE--SaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~ 184 (673)
T PRK14010 108 RIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGLA-TVDE--SAITGESAPVIKESGGDFDNVIGGTSVASDWL 184 (673)
T ss_pred EEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcce-EEec--chhcCCCCceeccCCCccCeeecCceeecceE
Confidence 7899999999999999999999999999999999999986 9999 999999999999999 88999999999999
Q ss_pred EEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc-ccCchHHHHHHHHHHHHhhc
Q 002768 158 EAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPI-QHRSYRDGINNLLVLLIGGI 235 (883)
Q Consensus 158 ~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~-~~~~~~~~~~~~l~llv~~i 235 (883)
+++|+++|.+|++||++++++++ ++++|+|..+..+...+.+ +++ +++ +..+++ ...++...+...+++++++|
T Consensus 185 ~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-i~l-~~~--~~~~~~~~~~~~~~~~~~~val~V~~I 260 (673)
T PRK14010 185 EVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-IFL-VVI--LTMYPLAKFLNFNLSIAMLIALAVCLI 260 (673)
T ss_pred EEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-HHH-HHH--HHHHHHHhhccHHHHHHHHHHHHHHhh
Confidence 99999999999999999999987 6789998766555332211 111 111 111111 11234445677788889999
Q ss_pred CchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHH
Q 002768 236 PIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARA 315 (883)
Q Consensus 236 P~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~ 315 (883)
||+||..++++++.|+.+|+|+|+++|+++++|+||++|++|||||||||+|++.+.++. .. .+.+.++++..++.+
T Consensus 261 P~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~--~~-~~~~~~~ll~~a~~~ 337 (673)
T PRK14010 261 PTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFI--PV-KSSSFERLVKAAYES 337 (673)
T ss_pred hhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEE--eC-CCccHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999877766532 22 244556666666665
Q ss_pred hccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccH-HHHHHHH
Q 002768 316 ARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKK-EIAVKVH 394 (883)
Q Consensus 316 ~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~~~~ 394 (883)
+. .+.||++.|++.++.+.... ......+++||++.+|+|++.+ +|+ .+.||+|+.++++|.... .....++
T Consensus 338 ~~-~s~~P~~~AIv~~a~~~~~~-~~~~~~~~~pF~~~~k~~gv~~---~g~--~i~kGa~~~il~~~~~~g~~~~~~~~ 410 (673)
T PRK14010 338 SI-ADDTPEGRSIVKLAYKQHID-LPQEVGEYIPFTAETRMSGVKF---TTR--EVYKGAPNSMVKRVKEAGGHIPVDLD 410 (673)
T ss_pred cC-CCCChHHHHHHHHHHHcCCC-chhhhcceeccccccceeEEEE---CCE--EEEECCHHHHHHHhhhcCCCCchHHH
Confidence 54 45689999999876422100 0011235689999999999864 344 455999999999997421 1233466
Q ss_pred HHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHH
Q 002768 395 TIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRR 474 (883)
Q Consensus 395 ~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~ 474 (883)
+.+++++++|+|+++++.+ ++++|+++++||||+|++++|++||++||+++|+||||+.||.++|++
T Consensus 411 ~~~~~~a~~G~~~l~v~~~-------------~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~e 477 (673)
T PRK14010 411 ALVKGVSKKGGTPLVVLED-------------NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKE 477 (673)
T ss_pred HHHHHHHhCCCeEEEEEEC-------------CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHH
Confidence 6778899999999998743 389999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 475 LGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 475 lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
+||. ++|||++||||+++|+.+|++|++|+|||||+||+|||++|||||||
T Consensus 478 lGI~-----------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM 528 (673)
T PRK14010 478 AGVD-----------------------------RFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAM 528 (673)
T ss_pred cCCc-----------------------------eEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEe
Confidence 9995 37999999999999999999999999999999999999999999999
Q ss_pred ccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 555 ADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 555 ~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
|+|||+||++||+||+||||++|++++++||++|.|+++++
T Consensus 529 gsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~ 569 (673)
T PRK14010 529 NSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLT 569 (673)
T ss_pred CCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-97 Score=931.98 Aligned_cols=761 Identities=17% Similarity=0.216 Sum_probs=554.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC
Q 002768 6 FLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE 85 (883)
Q Consensus 6 ~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 85 (883)
++.|++||.+|+++++++++++++++...... .+...++++++++++.+.+++|+++++++.++++ +++++|+||
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~--~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n---~~~~~v~~~ 92 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVPILSPTY--RGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVN---NRLTEVLEG 92 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC--ccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHh---CcEEEEECC
Confidence 58899999999999999999999987544332 2333455566666889999999999999987654 589999997
Q ss_pred -CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCC----eeEeccccccCCccccccccCC-----------------
Q 002768 86 -GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQASSALTGESLPVTKKTA----------------- 143 (883)
Q Consensus 86 -g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----l~Vde~es~LTGEs~pv~K~~g----------------- 143 (883)
|++++++++||+|||+|.|++||+||||++|+++++ +.||| |+|||||.|+.|++.
T Consensus 93 ~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~--s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~ 170 (1057)
T TIGR01652 93 HGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVET--ANLDGETNLKLRQALEETQKMLDEDDIKNFSG 170 (1057)
T ss_pred CCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEe--eccCCeecceEeecchhhhccCChhhHhhceE
Confidence 899999999999999999999999999999999655 79999 999999999988641
Q ss_pred -------------------------------CeeeeeeeEee-CceEEEEEEccchhhhhhHhhhhccccccChHHHHHH
Q 002768 144 -------------------------------DEVFSGSTCKH-GEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLT 191 (883)
Q Consensus 144 -------------------------------~~v~aGs~v~~-G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~ 191 (883)
+.+++||.+++ |.++|+|++||.+|++++.... ...+.+++++.++
T Consensus 171 ~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~--~~~k~s~le~~ln 248 (1057)
T TIGR01652 171 EIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ--APSKRSRLEKELN 248 (1057)
T ss_pred EEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCC--CcccccHHHHHHh
Confidence 35788999998 9999999999999988764322 2356789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhhccc----Cch---------------HHHHHHHHHHHHhhcCchhhHHHHHHHHHhH-
Q 002768 192 SIGNFCICSIAVGMILEIIVMFPIQH----RSY---------------RDGINNLLVLLIGGIPIAMPTVLSVTLAIGS- 251 (883)
Q Consensus 192 ~i~~~~~~~i~i~~~~~~~~~~~~~~----~~~---------------~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~- 251 (883)
++..++++..++.+++..++...+.. ..| ...+..++.++..++|++||+++++++++++
T Consensus 249 ~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~ 328 (1057)
T TIGR01652 249 FLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAY 328 (1057)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHH
Confidence 99877654433333333332211111 011 1256677889999999999999999999999
Q ss_pred -----hhhhcc----eEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe--ccCCC-----------------
Q 002768 252 -----HRLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV--FNRNM----------------- 303 (883)
Q Consensus 252 -----~~l~k~----~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~~~----------------- 303 (883)
.+|.++ ++++|+++++|+||++++||+|||||||+|+|++.++++.. +..+.
T Consensus 329 ~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~ 408 (1057)
T TIGR01652 329 FINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVEN 408 (1057)
T ss_pred HHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccc
Confidence 788864 59999999999999999999999999999999999987531 11000
Q ss_pred --------------C----------------hHHHHHHHHHHhcc--------------ccCChHHHHHHHHhCChH---
Q 002768 304 --------------D----------------KDMIVLLAARAARL--------------ENQDAIDAAIINMLADPK--- 336 (883)
Q Consensus 304 --------------~----------------~~~~l~~a~~~~~~--------------~~~~~~~~ai~~~~~~~~--- 336 (883)
+ ..+++..++.|... ..++|.|.|++.++...+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~ 488 (1057)
T TIGR01652 409 ENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVF 488 (1057)
T ss_pred cccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEE
Confidence 0 01233333444221 125899999998753210
Q ss_pred ---------------HHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhc-cHHHHHHHHHHHHHH
Q 002768 337 ---------------EARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE-KKEIAVKVHTIIDKF 400 (883)
Q Consensus 337 ---------------~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-~~~~~~~~~~~~~~~ 400 (883)
.....|+.++.+||+|.||||++++++++|++++++|||||.|+++|.. .++.++++.+.+++|
T Consensus 489 ~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~~~~ 568 (1057)
T TIGR01652 489 FERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENY 568 (1057)
T ss_pred EEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccchhHHHHHHHHHHHH
Confidence 0123578899999999999999999988888899999999999999985 345677889999999
Q ss_pred HhcCCeEeEEeeecccccc-------------------------cCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCC
Q 002768 401 AERGLRSLAVAIQEVSEMT-------------------------KESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV 455 (883)
Q Consensus 401 a~~G~R~l~vA~~~~~~~~-------------------------~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI 455 (883)
+++|+||+++|+|.+++.+ .+..|++|+|+|+++++||||+|++++|+.|+++||
T Consensus 569 a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGI 648 (1057)
T TIGR01652 569 ASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGI 648 (1057)
T ss_pred HHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCC
Confidence 9999999999999987532 134589999999999999999999999999999999
Q ss_pred eEEEEccCcHHHHHHHHHHcCCCCCCCCC---------------------------------------CcccCCCCCCCC
Q 002768 456 CVKMITGDQLAIAKETGRRLGMATNMYPS---------------------------------------SSLLGRDKDENE 496 (883)
Q Consensus 456 ~v~miTGD~~~tA~~ia~~lGi~~~~~~~---------------------------------------~~l~g~~~~~~~ 496 (883)
+|||+|||+++||.+||++|||..+.... .+++|.+++...
T Consensus 649 kv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l 728 (1057)
T TIGR01652 649 KIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYAL 728 (1057)
T ss_pred eEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHH
Confidence 99999999999999999999997543211 133444333221
Q ss_pred c----ccHHHHHHhcC--cEEEeChhhHHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCeeEEec--cccHHHhhcccE
Q 002768 497 A----LPVDELIEEAD--GFAGVFPEHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIAVA--DATDAARGAADI 567 (883)
Q Consensus 497 ~----~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGIam~--~gtd~ak~aADi 567 (883)
+ ..+.+++.+++ ||||++|+||.++|+.+|+. |++|+|||||+||+||||+|||||++. +|. .|+.+||+
T Consensus 729 ~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~-qA~~aaD~ 807 (1057)
T TIGR01652 729 DEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGM-QAVMASDF 807 (1057)
T ss_pred hhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHH-HHHHhhhh
Confidence 1 12444566666 99999999999999999998 999999999999999999999999884 233 46779999
Q ss_pred eecCCChhHHHHHH-HHHHHHHHHHHHHH-------HHHHHHHHh------h--cCCCChHHHHHHHHHhhhhh-ccccc
Q 002768 568 VLTEPGLSVIISAV-LTSRAIFQRMKNYT-------LGFVLLALI------W--EYDFPPFMVLIIAILNDGTI-MTISK 630 (883)
Q Consensus 568 vL~~~~~~~i~~ai-~~gR~~~~~i~~~~-------~~~~~~~~~------~--~~~~~~~~il~i~~~~d~~~-~~l~~ 630 (883)
++.+ |+.|..++ .+||++|+|+++++ +.+++..++ | ..+|.+++++++|++++.+| ++++.
T Consensus 808 ~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~ 885 (1057)
T TIGR01652 808 AIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGV 885 (1057)
T ss_pred hhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 9974 99999998 88999999999977 111111111 1 12467788999999999876 67754
Q ss_pred -CCCCC------CC------CCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHH
Q 002768 631 -DRVKP------SP------RPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYL 697 (883)
Q Consensus 631 -d~~~~------~~------~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (883)
|+..+ .| +.+.....+.|..|++.|++++++.+++.++.+...... ..|. ..+.....+.+|.
T Consensus 886 ~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g~---~~~~~~~~~~~~~ 961 (1057)
T TIGR01652 886 FDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSGS---LDDFSSVGVIVFT 961 (1057)
T ss_pred hcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCc---ccchhhHHHHHHH
Confidence 33311 11 122333456788899999999988876655544321111 1111 1122334455555
Q ss_pred HHHHHHHHHHHHHhcCCCccccchhHHHHHHHHHHHHHHHHHHHhh-c---ccccccCcchhhHHHHHHHHHHHHHHHHH
Q 002768 698 QVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYA-H---ISFAYISGVGWGWAGVIWLYSFVFYIPLD 773 (883)
Q Consensus 698 ~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 773 (883)
.+.+..++. ....++.|+|......|..+.+.+. ...++..+. . ++.+.....++.+|+.+++..++.++|+.
T Consensus 962 ~~~~~~~~~-~~~~~~~wt~~~~~~~~~S~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~ 1038 (1057)
T TIGR01652 962 ALVVIVNLK-IALEINRWNWISLITIWGSILVWLI--FVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRF 1038 (1057)
T ss_pred HHHHHHHHH-HHHHHhHhHHHHHHHHHHHHHHHHH--HHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 554444432 2334456766533333322222111 111111010 0 01111122346677787888888899999
Q ss_pred HHHHHHHHhccc
Q 002768 774 VIKFIVRYALSG 785 (883)
Q Consensus 774 ~~K~~~~~~~~~ 785 (883)
++|++.+.+.|.
T Consensus 1039 ~~~~~~~~~~P~ 1050 (1057)
T TIGR01652 1039 TYKAIQRLFRPP 1050 (1057)
T ss_pred HHHHHHHHcCCC
Confidence 999998888873
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-95 Score=857.27 Aligned_cols=521 Identities=25% Similarity=0.324 Sum_probs=442.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC----CCC---CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-eeEE
Q 002768 11 SFMWNPLSWVMEAAAVMAIVLANGG----GQG---PDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAP-KTKV 82 (883)
Q Consensus 11 ~~~~~~~~~~l~~aail~~~~~~~~----~~~---~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~-~~~V 82 (883)
.||+||+.++++++++++++++... +.. ..|...+.+++.++++..++.++|+|+++.+++|+++.++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 5899999999999999999986321 111 1233344555556667778889999999999999998875 7999
Q ss_pred EECCe-EEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCe---eeeeeeEeeCceE
Q 002768 83 LREGQ-WKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADE---VFSGSTCKHGEIE 158 (883)
Q Consensus 83 ~Rdg~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~---v~aGs~v~~G~~~ 158 (883)
+|||+ +++|++++|+|||+|.+++||+|||||++++|+. .||| |+|||||.||.|++|+. +|+||.|.+|+++
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~a-~VDE--SaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~ 185 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVA-SVDE--SAITGESAPVIRESGGDFSSVTGGTRVLSDWIV 185 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEccE-EEEc--ccccCCCCceEeCCCCccCeEEeceEEEeeeEE
Confidence 99988 9999999999999999999999999999999974 9999 99999999999999998 9999999999999
Q ss_pred EEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCc
Q 002768 159 AVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPI 237 (883)
Q Consensus 159 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~ 237 (883)
++|+++|.+|++|||.++++++ .+++|+|..++.+..++...+++.++....+.+. .+.. .++...+++++++|||
T Consensus 186 i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~~-~g~~--~~l~~~iallV~aiP~ 262 (679)
T PRK01122 186 IRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAAY-SGGA--LSITVLVALLVCLIPT 262 (679)
T ss_pred EEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH-hCch--HHHHHHHHHHHHcccc
Confidence 9999999999999999999987 6789999887776555433222222221111111 1222 3678889999999999
Q ss_pred hhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhc
Q 002768 238 AMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAAR 317 (883)
Q Consensus 238 aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~ 317 (883)
+++..++++...|+.+|+|+|+++|+++++|+||++|++|||||||||+|+|++.+++ .. .+.+.++++.+++.++.
T Consensus 263 alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~a~~~s~ 339 (679)
T PRK01122 263 TIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFL--PV-PGVTEEELADAAQLSSL 339 (679)
T ss_pred hhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEE--eC-CCCCHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999998764 22 35667777777776655
Q ss_pred cccCChHHHHHHHHhCCh---HHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhcc-HHHHHHH
Q 002768 318 LENQDAIDAAIINMLADP---KEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEK-KEIAVKV 393 (883)
Q Consensus 318 ~~~~~~~~~ai~~~~~~~---~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~~ 393 (883)
.. .||.++|++.++.+. ......++..+++||++.++++++.+ +| ..+.||++|.+++.|... ...++++
T Consensus 340 ~s-~hP~~~AIv~~a~~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~---~g--~~~~kGa~e~il~~~~~~g~~~~~~~ 413 (679)
T PRK01122 340 AD-ETPEGRSIVVLAKQRFNLRERDLQSLHATFVPFSAQTRMSGVDL---DG--REIRKGAVDAIRRYVESNGGHFPAEL 413 (679)
T ss_pred CC-CCchHHHHHHHHHhhcCCCchhhccccceeEeecCcCceEEEEE---CC--EEEEECCHHHHHHHHHhcCCcChHHH
Confidence 44 479999998876431 11111245677899999988887643 35 467899999999999642 2334667
Q ss_pred HHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHH
Q 002768 394 HTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGR 473 (883)
Q Consensus 394 ~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~ 473 (883)
++.+++++++|+|++++|++. +++|+++++||+|||++++|++||++||+++|+||||+.||.+||+
T Consensus 414 ~~~~~~~a~~G~~~l~va~~~-------------~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~ 480 (679)
T PRK01122 414 DAAVDEVARKGGTPLVVAEDN-------------RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 480 (679)
T ss_pred HHHHHHHHhCCCcEEEEEECC-------------eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH
Confidence 888899999999999999753 8999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 474 RLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 474 ~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
++||+ ++|||++||||+++|+.+|++|++|+|||||+||+|||++||||||
T Consensus 481 elGId-----------------------------~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIA 531 (679)
T PRK01122 481 EAGVD-----------------------------DFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVA 531 (679)
T ss_pred HcCCc-----------------------------EEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEE
Confidence 99994 3799999999999999999999999999999999999999999999
Q ss_pred eccccHHHhhcccEeecCCChhHHHHHHHHHHHHH
Q 002768 554 VADATDAARGAADIVLTEPGLSVIISAVLTSRAIF 588 (883)
Q Consensus 554 m~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~ 588 (883)
||+|||+||++||+||+||||++|++++++||++.
T Consensus 532 MgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~ 566 (679)
T PRK01122 532 MNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLL 566 (679)
T ss_pred eCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999977
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-91 Score=864.92 Aligned_cols=754 Identities=15% Similarity=0.153 Sum_probs=535.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC
Q 002768 6 FLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE 85 (883)
Q Consensus 6 ~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 85 (883)
.+.+++||..+.++++++.+++++++..+.. ..+...+++++++++.++.+.+++++++++.++.+ +.+++|+|+
T Consensus 104 P~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~--~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N---~~~~~v~~~ 178 (1178)
T PLN03190 104 PRNLFEQFHRVAYIYFLVIAVLNQLPQLAVF--GRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIEN---NRLAWVLVD 178 (1178)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhCCCcccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhc---CcEEEEEEC
Confidence 4677899999999999999999998765443 23455677888888889999999999999887764 578999999
Q ss_pred CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCC----eeEeccccccCCccccccccCC------------------
Q 002768 86 GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQASSALTGESLPVTKKTA------------------ 143 (883)
Q Consensus 86 g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----l~Vde~es~LTGEs~pv~K~~g------------------ 143 (883)
|+++++++++|+|||+|.+++||.||||++|++++. ++||+ |+|||||.|+.|.++
T Consensus 179 ~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdt--s~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~ 256 (1178)
T PLN03190 179 DQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQT--INLDGESNLKTRYAKQETLSKIPEKEKINGLIK 256 (1178)
T ss_pred CeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEc--cccCCeeeeeEecccchhhhcchhhhhceEEEE
Confidence 999999999999999999999999999999998543 68999 999999999999753
Q ss_pred ---------------------------CeeeeeeeEeeC-ceEEEEEEccchhhhhhHhhhhcc-ccccChHHHHHHHHH
Q 002768 144 ---------------------------DEVFSGSTCKHG-EIEAVVIATGVHSFFGKAAHLVDS-TEVVGHFQQVLTSIG 194 (883)
Q Consensus 144 ---------------------------~~v~aGs~v~~G-~~~~~V~~tG~~T~~gki~~l~~~-~~~~~~~~~~~~~i~ 194 (883)
+.+++||.+++. .++|+|++||.+|+.. ..... ..+.+++++.+|++.
T Consensus 257 ~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~---~N~~~~~~K~S~le~~~N~~v 333 (1178)
T PLN03190 257 CEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM---LNNSGAPSKRSRLETRMNLEI 333 (1178)
T ss_pred EeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh---hcCCCCCCCccHHHHHHhHHH
Confidence 225556666654 5999999999999732 11112 256789999999988
Q ss_pred HHHHHHHHHHHHHHHHhH--hhccc-C-----ch-----------------------HHHHHHHHHHHHhhcCchhhHHH
Q 002768 195 NFCICSIAVGMILEIIVM--FPIQH-R-----SY-----------------------RDGINNLLVLLIGGIPIAMPTVL 243 (883)
Q Consensus 195 ~~~~~~i~i~~~~~~~~~--~~~~~-~-----~~-----------------------~~~~~~~l~llv~~iP~aLp~~~ 243 (883)
.++++..++.+++..+.. |.... . .| ...+...++++..+||++|++.+
T Consensus 334 i~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtl 413 (1178)
T PLN03190 334 IILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISM 413 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeH
Confidence 765544433333322221 21100 0 00 01122234666789999999999
Q ss_pred HHHHHHhHhhhhcce----------EEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEe--ccC----------
Q 002768 244 SVTLAIGSHRLSQQG----------AITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEV--FNR---------- 301 (883)
Q Consensus 244 ~~~l~~~~~~l~k~~----------ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~--~~~---------- 301 (883)
+++...++..+.+.. +.+|+.+.+|+||+|++||+|||||||+|+|++.++.+.. ++.
T Consensus 414 eivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~ 493 (1178)
T PLN03190 414 ELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHA 493 (1178)
T ss_pred HHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhh
Confidence 999988787776543 8899999999999999999999999999999999987621 100
Q ss_pred -------C----------C------------C-h-----HHHHHHHHHHhcc------------------ccCChHHHHH
Q 002768 302 -------N----------M------------D-K-----DMIVLLAARAARL------------------ENQDAIDAAI 328 (883)
Q Consensus 302 -------~----------~------------~-~-----~~~l~~a~~~~~~------------------~~~~~~~~ai 328 (883)
+ . + + .+.+...+.|... ...+|.|.|+
T Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~AL 573 (1178)
T PLN03190 494 GYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQAL 573 (1178)
T ss_pred ccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHH
Confidence 0 0 0 0 1233333433221 1137999999
Q ss_pred HHHhCCh----------------HHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhcc--HHHH
Q 002768 329 INMLADP----------------KEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEK--KEIA 390 (883)
Q Consensus 329 ~~~~~~~----------------~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~--~~~~ 390 (883)
+..+.+. ...+..|+.++.+||+|+||||++++++++|+.++++|||||.|+++|+.. ++.+
T Consensus 574 v~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~ 653 (1178)
T PLN03190 574 VYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVI 653 (1178)
T ss_pred HHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhH
Confidence 9876431 123567889999999999999999999888889999999999999999753 3467
Q ss_pred HHHHHHHHHHHhcCCeEeEEeeeccccccc-------------------------CCCCCCceEEeecCCCCCCCccHHH
Q 002768 391 VKVHTIIDKFAERGLRSLAVAIQEVSEMTK-------------------------ESPGGPWTFCGLLPLFDPPRHDSVD 445 (883)
Q Consensus 391 ~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~-------------------------~~~e~~l~~lG~i~l~D~~R~~~~~ 445 (883)
+++.+.+++|+++|+|||++|||.+++.+. +..|++|+++|+++++||||+|+++
T Consensus 654 ~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~ 733 (1178)
T PLN03190 654 RATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPE 733 (1178)
T ss_pred HHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHH
Confidence 788999999999999999999999865321 2458999999999999999999999
Q ss_pred HHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCC----------------------------------------
Q 002768 446 TIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS---------------------------------------- 485 (883)
Q Consensus 446 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~---------------------------------------- 485 (883)
+|+.|+++||+|||+|||+.+||.+||++|||.++.....
T Consensus 734 ~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 813 (1178)
T PLN03190 734 AIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAA 813 (1178)
T ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccc
Confidence 9999999999999999999999999999999975432111
Q ss_pred -------cccCCCCCCCCc----ccHHHHHHhcC--cEEEeChhhHHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCee
Q 002768 486 -------SLLGRDKDENEA----LPVDELIEEAD--GFAGVFPEHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 486 -------~l~g~~~~~~~~----~~~~~~~~~~~--vfar~~Pe~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVG 551 (883)
++.|..++.+.+ +.+.+++.+++ +|||++|+||+++|+.+|++ +++|+|+|||+||+||||+||||
T Consensus 814 ~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVG 893 (1178)
T PLN03190 814 ASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVG 893 (1178)
T ss_pred cCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCee
Confidence 111211111111 23556666666 69999999999999999997 58999999999999999999999
Q ss_pred EEec--cccHHHhhcccEeecCCChhHHHHHH-HHHHHHHHHHHHHH-------HHHHHHHHhhc--------CCCChHH
Q 002768 552 IAVA--DATDAARGAADIVLTEPGLSVIISAV-LTSRAIFQRMKNYT-------LGFVLLALIWE--------YDFPPFM 613 (883)
Q Consensus 552 Iam~--~gtd~ak~aADivL~~~~~~~i~~ai-~~gR~~~~~i~~~~-------~~~~~~~~~~~--------~~~~~~~ 613 (883)
|++. +|.+|++ |||+++.+ |.-+..++ .|||+.|+|+.+.+ +.+.+..++|. ..|.++.
T Consensus 894 IGIsG~EG~qA~~-aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~ 970 (1178)
T PLN03190 894 VGISGQEGRQAVM-ASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWS 970 (1178)
T ss_pred eeecCchhHHHHH-hhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHH
Confidence 9874 5666655 99999965 55566665 48999999998766 22222222221 1244566
Q ss_pred HHHHHHHhhhhh-cccc-cCCCCC------------CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 002768 614 VLIIAILNDGTI-MTIS-KDRVKP------------SPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHF 679 (883)
Q Consensus 614 il~i~~~~d~~~-~~l~-~d~~~~------------~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 679 (883)
+.+.|++...+| +.++ +|+..+ ..+.+.....+.|+.|++.|++.+++.+++.++.+.....
T Consensus 971 ~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~---- 1046 (1178)
T PLN03190 971 SVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTI---- 1046 (1178)
T ss_pred HHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc----
Confidence 777777665554 5553 454322 1233344456789999999999999888766555432111
Q ss_pred ccccCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccchhHHHHHHHHHHH-HHHHHHHHhhc-ccccccCcchhhH
Q 002768 680 HVKSLSSNSEEVSSALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQ-LVATLIAVYAH-ISFAYISGVGWGW 757 (883)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 757 (883)
+. .......++.+.++.++. ....++.|+|.....+|+.+.+.+.. ++...++.... +.+. ....++.+
T Consensus 1047 ~~-------~~~~~~~~~~~v~~vnl~-i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~f 1117 (1178)
T PLN03190 1047 DG-------SSIGDLWTLAVVILVNLH-LAMDIIRWNWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIF-HIAKTGSF 1117 (1178)
T ss_pred Cc-------eeEhHhhhhHHHHHHHHH-HHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHH-HHhccHHH
Confidence 11 011222333333333332 22344467665443333322221111 11111110000 1111 11224667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 002768 758 AGVIWLYSFVFYIPLDVIKFIVRYALSG 785 (883)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~K~~~~~~~~~ 785 (883)
|+.+++..++.++|+.++|++.|.+.|.
T Consensus 1118 wl~ill~~~~~l~p~~~~~~~~~~~~P~ 1145 (1178)
T PLN03190 1118 WLCLLAIVVAALLPRFVVKVLYQYFTPC 1145 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8888888888999999999999999874
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-90 Score=814.11 Aligned_cols=529 Identities=23% Similarity=0.298 Sum_probs=442.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---C---CCCCChhhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-ee
Q 002768 11 SFMWNPLSWVMEAAAVMAIVLANG---G---GQGPDWQDF---VGIVCLLLINSTISFIEENNAGNAAAALMAHLAP-KT 80 (883)
Q Consensus 11 ~~~~~~~~~~l~~aail~~~~~~~---~---~~~~~~~~~---~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~-~~ 80 (883)
.||+||+.++++++++++++++.. . +....|++. +.+++.++++..++.++|+|+++++++|++..++ .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 578999999999999999998542 1 111246663 3344456777888889999999999999998877 48
Q ss_pred EEEE-CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCe---eeeeeeEeeCc
Q 002768 81 KVLR-EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADE---VFSGSTCKHGE 156 (883)
Q Consensus 81 ~V~R-dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~---v~aGs~v~~G~ 156 (883)
+|+| ||++++|++++|+|||+|.+++||+|||||++++|+ +.||| |+|||||.||.|++|+. +|+||.|.+|+
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDE--SaLTGES~PV~K~~g~~~~~V~aGT~v~~G~ 184 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDE--SAITGESAPVIKESGGDFASVTGGTRILSDW 184 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEc--ccccCCCCceeecCCCCcceeecCcEEEeeE
Confidence 8885 999999999999999999999999999999999996 59999 99999999999999985 99999999999
Q ss_pred eEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhc
Q 002768 157 IEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGI 235 (883)
Q Consensus 157 ~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~i 235 (883)
+.++|+++|.+|++|||.++++++ .+++|+|..++.+..++...+++..+. +..+..+. ....++...+++++++|
T Consensus 185 ~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~--~~~~~~~~-~~~~~~~~lvallV~ai 261 (675)
T TIGR01497 185 LVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTAT--LWPFAAYG-GNAISVTVLVALLVCLI 261 (675)
T ss_pred EEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhc-ChhHHHHHHHHHHHHhC
Confidence 999999999999999999999987 668999988877765543222211111 11111111 12235677789999999
Q ss_pred CchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHH
Q 002768 236 PIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARA 315 (883)
Q Consensus 236 P~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~ 315 (883)
||+++...+.....|+.+|+|+|+++|+++++|+||++|++|||||||||+|+|++.+++ .. .+.+.++++.+++.+
T Consensus 262 P~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~--~~-~~~~~~~ll~~aa~~ 338 (675)
T TIGR01497 262 PTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFI--PA-QGVDEKTLADAAQLA 338 (675)
T ss_pred chhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEE--ec-CCCcHHHHHHHHHHh
Confidence 998887777777789999999999999999999999999999999999999999998864 22 355677777777776
Q ss_pred hccccCChHHHHHHHHhCChHH--HhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhcc-HHHHHH
Q 002768 316 ARLENQDAIDAAIINMLADPKE--ARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEK-KEIAVK 392 (883)
Q Consensus 316 ~~~~~~~~~~~ai~~~~~~~~~--~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~-~~~~~~ 392 (883)
+.. ++||.++|++.++.+... ....++..++.||++.++++++.+. +| ..+.||+||.+++.|... ...+.+
T Consensus 339 ~~~-s~hP~a~Aiv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~~~~~~ 413 (675)
T TIGR01497 339 SLA-DDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGGHIPTD 413 (675)
T ss_pred cCC-CCCcHHHHHHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCCCCcHH
Confidence 554 457999999887643211 1112345678999999877765433 45 367899999999988532 123456
Q ss_pred HHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHH
Q 002768 393 VHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG 472 (883)
Q Consensus 393 ~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia 472 (883)
+++.+++++++|+|++++|++. +++|++++.||+|||++++|++||++||+++|+|||+..+|.++|
T Consensus 414 ~~~~~~~~a~~G~r~l~va~~~-------------~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA 480 (675)
T TIGR01497 414 LDQAVDQVARQGGTPLVVCEDN-------------RIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA 480 (675)
T ss_pred HHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 7788889999999999999864 899999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 473 RRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 473 ~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
+++||. +++||++||||.++|+.+|++|+.|+|+|||+||+|||++|||||
T Consensus 481 ~~lGI~-----------------------------~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGi 531 (675)
T TIGR01497 481 AEAGVD-----------------------------DFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGV 531 (675)
T ss_pred HHcCCC-----------------------------EEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 999994 369999999999999999999999999999999999999999999
Q ss_pred EeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 553 AVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 553 am~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
||++|+|+||++||++++||||++|++++++||+++-+....+
T Consensus 532 Am~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~ 574 (675)
T TIGR01497 532 AMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALT 574 (675)
T ss_pred EeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999997766544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-87 Score=791.11 Aligned_cols=491 Identities=28% Similarity=0.411 Sum_probs=426.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE-CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEe
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLR-EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLE 118 (883)
Q Consensus 40 ~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~R-dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~ 118 (883)
+|.+..+++++++++.+++-+-..|+++++++|.++.|.++++++ ||++++||.+||+|||+|.+++||+||+||++++
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~ 252 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVS 252 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEe
Confidence 347788889999999999999999999999999999999997776 5669999999999999999999999999999999
Q ss_pred eCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHH
Q 002768 119 GDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFC 197 (883)
Q Consensus 119 g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~ 197 (883)
|++ .||| |+|||||.||.|++||.||+||.+.+|..+.+|+++|.+|.++||.++++++ .+++|.|+..++++.++
T Consensus 253 G~s-~vDe--S~iTGEs~PV~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~f 329 (713)
T COG2217 253 GSS-SVDE--SMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYF 329 (713)
T ss_pred CcE-Eeec--chhhCCCCCEecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHcc
Confidence 998 8999 9999999999999999999999999999999999999999999999999999 78899999999999988
Q ss_pred HHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEE
Q 002768 198 ICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 277 (883)
Q Consensus 198 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~ 277 (883)
...+++..++.+++++.....+|..++..++++|+++|||+|.++.|+++..|..+.+|+|+++|+.+++|+++++|+++
T Consensus 330 vp~vl~ia~l~f~~w~~~~~~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvv 409 (713)
T COG2217 330 VPVVLVIAALTFALWPLFGGGDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVV 409 (713)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEE
Confidence 77554444444443333333678899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceE
Q 002768 278 SDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRT 357 (883)
Q Consensus 278 ~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~ 357 (883)
||||||||+|+++|.++. ..+ + ++++++.+++..+..+ +||+.+|+++++.+.. ....+..+.+|-. .-.
T Consensus 410 FDKTGTLT~G~p~v~~v~--~~~-~-~e~~~L~laAalE~~S-~HPiA~AIv~~a~~~~--~~~~~~~~~i~G~---Gv~ 479 (713)
T COG2217 410 FDKTGTLTEGKPEVTDVV--ALD-G-DEDELLALAAALEQHS-EHPLAKAIVKAAAERG--LPDVEDFEEIPGR---GVE 479 (713)
T ss_pred EeCCCCCcCCceEEEEEe--cCC-C-CHHHHHHHHHHHHhcC-CChHHHHHHHHHHhcC--CCCccceeeeccC---cEE
Confidence 999999999999999865 332 3 7788888888776654 5799999999764322 1112223333311 111
Q ss_pred EEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCC
Q 002768 358 AITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFD 437 (883)
Q Consensus 358 sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D 437 (883)
+ . .+|+.+ ..|++..+.+.-.. ... ..+..+.+.++|..++.++.+. +++|+++++|
T Consensus 480 ~-~---v~g~~v--~vG~~~~~~~~~~~---~~~-~~~~~~~~~~~G~t~v~va~dg-------------~~~g~i~~~D 536 (713)
T COG2217 480 A-E---VDGERV--LVGNARLLGEEGID---LPL-LSERIEALESEGKTVVFVAVDG-------------KLVGVIALAD 536 (713)
T ss_pred E-E---ECCEEE--EEcCHHHHhhcCCC---ccc-hhhhHHHHHhcCCeEEEEEECC-------------EEEEEEEEeC
Confidence 1 1 256544 45999877542111 111 4556778889999999999987 8999999999
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++|+|++++|++||+.|+++.|+||||..+|+++|+++||. +++|++.|||
T Consensus 537 ~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId-----------------------------~v~AellPed 587 (713)
T COG2217 537 ELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID-----------------------------EVRAELLPED 587 (713)
T ss_pred CCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-----------------------------hheccCCcHH
Confidence 99999999999999999999999999999999999999995 4799999999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
|.++|+.||++|++|+|+|||+||+|||++||||||||+|||+|+++||++|++++++.++.+++.+|+++++||+++
T Consensus 588 K~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl 665 (713)
T COG2217 588 KAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNL 665 (713)
T ss_pred HHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999983
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-82 Score=766.69 Aligned_cols=502 Identities=27% Similarity=0.354 Sum_probs=434.9
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcC
Q 002768 18 SWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLV 97 (883)
Q Consensus 18 ~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv 97 (883)
..++.++++.+++. +.|.++.+++++++++..++.++++|+++.+++|+++.|++++|+|||++++|++++|+
T Consensus 190 ~~L~~~a~~~a~~~-------~~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~ 262 (741)
T PRK11033 190 ETLMSVAAIGALFI-------GATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLR 262 (741)
T ss_pred cHHHHHHHHHHHHH-------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCC
Confidence 34455566666655 47888999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhh
Q 002768 98 PGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLV 177 (883)
Q Consensus 98 ~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~ 177 (883)
|||+|.+++||+|||||+|++|+. .||| |+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+|||.+++
T Consensus 263 ~GDiv~v~~G~~IP~Dg~vi~g~~-~vde--s~lTGEs~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv 339 (741)
T PRK11033 263 PGDVIEVAAGGRLPADGKLLSPFA-SFDE--SALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLI 339 (741)
T ss_pred CCCEEEECCCCEEecceEEEECcE-Eeec--ccccCCCCCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHH
Confidence 999999999999999999999985 8999 9999999999999999999999999999999999999999999999999
Q ss_pred ccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhc
Q 002768 178 DST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQ 256 (883)
Q Consensus 178 ~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k 256 (883)
+++ .+++|+|+.++++++++...+++..++.+++++.+.+.+|..++...+++++++|||+|.++.|+++..+..+++|
T Consensus 340 ~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar 419 (741)
T PRK11033 340 EEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAAR 419 (741)
T ss_pred HHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHH
Confidence 988 6689999999999998766555544444444334456678888999999999999999999999999999999999
Q ss_pred ceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChH
Q 002768 257 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPK 336 (883)
Q Consensus 257 ~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~ 336 (883)
+|+++|+.+++|+|+++|++|||||||||+|+|+|.++. .+ .+.++++++.+++..+. .++||+++|+++++.+.
T Consensus 420 ~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~aa~~e~-~s~hPia~Ai~~~a~~~- 494 (741)
T PRK11033 420 RGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIH--PA-TGISESELLALAAAVEQ-GSTHPLAQAIVREAQVR- 494 (741)
T ss_pred CCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEE--ec-CCCCHHHHHHHHHHHhc-CCCCHHHHHHHHHHHhc-
Confidence 999999999999999999999999999999999998864 22 24667777777765543 45689999999875421
Q ss_pred HHhhcccEeEeecCCCCCceEEEE-EE-cCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeec
Q 002768 337 EARANIKEVHFLPFNPVDKRTAIT-YI-DSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQE 414 (883)
Q Consensus 337 ~~~~~~~~l~~~pF~~~~k~~sv~-~~-~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~ 414 (883)
+. .+||.+..+.+.-. ++ ..+|+.+. .|+|+.+.+ ..+.+.+.++++.++|+|+++++++.
T Consensus 495 ----~~----~~~~~~~~~~~~g~Gv~~~~~g~~~~--ig~~~~~~~-------~~~~~~~~~~~~~~~g~~~v~va~~~ 557 (741)
T PRK11033 495 ----GL----AIPEAESQRALAGSGIEGQVNGERVL--ICAPGKLPP-------LADAFAGQINELESAGKTVVLVLRND 557 (741)
T ss_pred ----CC----CCCCCcceEEEeeEEEEEEECCEEEE--Eecchhhhh-------ccHHHHHHHHHHHhCCCEEEEEEECC
Confidence 11 24666665554321 11 23566554 488887754 12334556678899999999999865
Q ss_pred ccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCC
Q 002768 415 VSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDE 494 (883)
Q Consensus 415 ~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~ 494 (883)
+++|+++++|++|+|++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 558 -------------~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---------------- 608 (741)
T PRK11033 558 -------------DVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---------------- 608 (741)
T ss_pred -------------EEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------
Confidence 899999999999999999999999999999999999999999999999984
Q ss_pred CCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCCh
Q 002768 495 NEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGL 574 (883)
Q Consensus 495 ~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~ 574 (883)
.+++++|+||.++|+.||+. +.|+|+|||+||+|||++||||||||+|+|+++++||++++++++
T Consensus 609 --------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~adivl~~~~l 673 (741)
T PRK11033 609 --------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETADAALTHNRL 673 (741)
T ss_pred --------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCH
Confidence 26778999999999999965 589999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHH
Q 002768 575 SVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 575 ~~i~~ai~~gR~~~~~i~~~~ 595 (883)
..++.++++||++++|||+++
T Consensus 674 ~~l~~~i~~sr~~~~~I~~nl 694 (741)
T PRK11033 674 RGLAQMIELSRATHANIRQNI 694 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999985
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-80 Score=707.58 Aligned_cols=607 Identities=24% Similarity=0.355 Sum_probs=465.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
++.+..++++.-+|+.....+..+++..- .++..+..|+++-+.+...+.+|+++..+.+..+-. ....++|
T Consensus 183 k~i~~iLv~EvL~PfYlFQ~fSv~lW~~d-------~Y~~YA~cI~iisv~Si~~sv~e~r~qs~rlr~mv~-~~~~V~V 254 (1140)
T KOG0208|consen 183 KSISQILVKEVLNPFYLFQAFSVALWLAD-------SYYYYAFCIVIISVYSIVLSVYETRKQSIRLRSMVK-FTCPVTV 254 (1140)
T ss_pred ccHHHHHHHhccchHHHHHhHHhhhhhcc-------cchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEE
Confidence 47788999999999988777766665543 244446667777777888899999998888877753 4578999
Q ss_pred EECCeEEEEEccCcCCCcEEEEeC-CCeecccEEEEeeCCeeEeccccccCCccccccccCC------------------
Q 002768 83 LREGQWKEQDAAVLVPGDIISIKL-GDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA------------------ 143 (883)
Q Consensus 83 ~Rdg~~~~i~~~~Lv~GDiv~l~~-Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g------------------ 143 (883)
+|||.|++|+++|||||||+.+.+ |-..|||++|++|++ .||| |+|||||.||.|.|-
T Consensus 255 ~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~c-ivNE--smLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~ 331 (1140)
T KOG0208|consen 255 IRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGDC-IVNE--SMLTGESVPVTKTPLPMGTDSLDSITISMSTNS 331 (1140)
T ss_pred EECCEEEEEeccccccccEEEECCCCeEeecceEEEeCcE-Eeec--ccccCCcccccccCCccccccCcCeeechhhcC
Confidence 999999999999999999999999 999999999999997 7999 999999999999873
Q ss_pred -CeeeeeeeEee------CceEEEEEEccchhhhhhHhhhhcccc-ccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhc
Q 002768 144 -DEVFSGSTCKH------GEIEAVVIATGVHSFFGKAAHLVDSTE-VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPI 215 (883)
Q Consensus 144 -~~v~aGs~v~~------G~~~~~V~~tG~~T~~gki~~l~~~~~-~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~ 215 (883)
+.+|+||.+.+ |.+.++|++||-+|..|++.+.+-.++ ....+-+-.-++..++.+...++.+ ..++.+..
T Consensus 332 rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfi-y~~i~l~~ 410 (1140)
T KOG0208|consen 332 RHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFI-YTAIVLNL 410 (1140)
T ss_pred cceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHhHhHHH
Confidence 35999999975 779999999999999999988877652 2222333332222222221122222 22223334
Q ss_pred ccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEE
Q 002768 216 QHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNL 295 (883)
Q Consensus 216 ~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~ 295 (883)
.+.+....+..++-++...+|.|||.++++....+..||.|+||.|.+++.+...|++|++|||||||||++.+.+-.+.
T Consensus 411 ~g~~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~ 490 (1140)
T KOG0208|consen 411 LGVPLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVV 490 (1140)
T ss_pred cCCCHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEE
Confidence 56778888999999999999999999999999999999999999999999999999999999999999999999986654
Q ss_pred EEecc--CC----------------------CCh-HHHHHHHHHHhcc------ccCChHHHHHHHHhC-----------
Q 002768 296 IEVFN--RN----------------------MDK-DMIVLLAARAARL------ENQDAIDAAIINMLA----------- 333 (883)
Q Consensus 296 i~~~~--~~----------------------~~~-~~~l~~a~~~~~~------~~~~~~~~ai~~~~~----------- 333 (883)
...-+ .+ ..+ ..+....+.|... -.+||+|..+.+..+
T Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~ 570 (1140)
T KOG0208|consen 491 PVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDE 570 (1140)
T ss_pred eccccccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccch
Confidence 21000 00 001 0122222222221 135777654433210
Q ss_pred -------------ChHH--------H-hhcccEeEeecCCCCCceEEEEEEcC-CCcEEEEEcCcHHHHHhhhhccHHHH
Q 002768 334 -------------DPKE--------A-RANIKEVHFLPFNPVDKRTAITYIDS-DGNWYRASKGAPEQILNLCKEKKEIA 390 (883)
Q Consensus 334 -------------~~~~--------~-~~~~~~l~~~pF~~~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~ 390 (883)
+|.+ . ...+..++.+||+|.-+||||++.++ +.+.+.|+|||||.|.+.|+. +.++
T Consensus 571 ~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p-~tvP 649 (1140)
T KOG0208|consen 571 ATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP-ETVP 649 (1140)
T ss_pred hhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc-ccCC
Confidence 1110 0 01366788999999999999999864 567889999999999999985 3567
Q ss_pred HHHHHHHHHHHhcCCeEeEEeeeccccc--------ccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEcc
Q 002768 391 VKVHTIIDKFAERGLRSLAVAIQEVSEM--------TKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITG 462 (883)
Q Consensus 391 ~~~~~~~~~~a~~G~R~l~vA~~~~~~~--------~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTG 462 (883)
..+++.++.|+.+|+|++|+|+|+++.. .++..|++++|+|++.|++++|++++.+|++|++|+|+++|+||
T Consensus 650 ~dy~evl~~Yt~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTG 729 (1140)
T KOG0208|consen 650 ADYQEVLKEYTHQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTG 729 (1140)
T ss_pred ccHHHHHHHHHhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcC
Confidence 8899999999999999999999998765 35778999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHcCCCCCCCC-------------------------CCcccCCCCCC-----------C-----------
Q 002768 463 DQLAIAKETGRRLGMATNMYP-------------------------SSSLLGRDKDE-----------N----------- 495 (883)
Q Consensus 463 D~~~tA~~ia~~lGi~~~~~~-------------------------~~~l~g~~~~~-----------~----------- 495 (883)
||..||..+||+|||..+... .....-.+.+. .
T Consensus 730 DNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG 809 (1140)
T KOG0208|consen 730 DNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSG 809 (1140)
T ss_pred CchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecC
Confidence 999999999999999643210 00000000000 0
Q ss_pred ---------CcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhccc
Q 002768 496 ---------EALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566 (883)
Q Consensus 496 ---------~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aAD 566 (883)
..+.+++++.+.+||||++|+||.++|+.||+-|+.|+|+|||+||+.|||+||+||+++++ + |.-||.
T Consensus 810 ~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSea-E-ASvAAp 887 (1140)
T KOG0208|consen 810 KTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSEA-E-ASVAAP 887 (1140)
T ss_pred chhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhhh-h-HhhcCc
Confidence 11236778888999999999999999999999999999999999999999999999999853 2 344888
Q ss_pred EeecCCChhHHHHHHHHHHH-------HHHHHHHHHH-HHHHHHHhh--cCCCChHHHHHHHHHhhhh
Q 002768 567 IVLTEPGLSVIISAVLTSRA-------IFQRMKNYTL-GFVLLALIW--EYDFPPFMVLIIAILNDGT 624 (883)
Q Consensus 567 ivL~~~~~~~i~~ai~~gR~-------~~~~i~~~~~-~~~~~~~~~--~~~~~~~~il~i~~~~d~~ 624 (883)
+.-.-++.+.+++.|++||. +|+-|--|.+ -|+...+.+ +..+..+|.+.+.++-..+
T Consensus 888 FTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~LY~~~~nl~D~Qfl~iDLlii~p 955 (1140)
T KOG0208|consen 888 FTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVVFLYLINSNLGDLQFLFIDLLIITP 955 (1140)
T ss_pred cccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhheeeeecccccchhhhhhHHHHHHH
Confidence 88888899999999999997 4555555542 232222222 4567788988888866543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-81 Score=716.75 Aligned_cols=500 Identities=25% Similarity=0.358 Sum_probs=425.4
Q ss_pred CChhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCe-EEEEEccCcCCCcEEEEeCCCeecccEEE
Q 002768 39 PDWQD-FVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQ-WKEQDAAVLVPGDIISIKLGDIIPADARL 116 (883)
Q Consensus 39 ~~~~~-~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~l 116 (883)
..++| ..+++.++.+...++-....++..++..|+++.|.++.++.+|+ .++||.+.|++||+|.+++|++||+||++
T Consensus 338 ~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~V 417 (951)
T KOG0207|consen 338 PTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVV 417 (951)
T ss_pred chhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEE
Confidence 44444 56667778888888888888999999999999999999999997 89999999999999999999999999999
Q ss_pred EeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHH
Q 002768 117 LEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGN 195 (883)
Q Consensus 117 l~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~ 195 (883)
++|++ .||| |.+|||+.||.|++|+.|.+||.+.+|.....++++|.||.+++|.++++++ .++.|+|+.+|+++.
T Consensus 418 v~Gss-~VDE--s~iTGEs~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~ 494 (951)
T KOG0207|consen 418 VDGSS-EVDE--SLITGESMPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAG 494 (951)
T ss_pred EeCce-eech--hhccCCceecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhh
Confidence 99998 9999 9999999999999999999999999999999999999999999999999999 778999999999999
Q ss_pred HHHHHHHHHHHHHHHhHhhccc----------CchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchh
Q 002768 196 FCICSIAVGMILEIIVMFPIQH----------RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMT 265 (883)
Q Consensus 196 ~~~~~i~i~~~~~~~~~~~~~~----------~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~ 265 (883)
++...+++..++.++++..+.. ..+..++..++++++++|||+|.++.|++...|....+++|+++|..+
T Consensus 495 yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge 574 (951)
T KOG0207|consen 495 YFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGE 574 (951)
T ss_pred cCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcH
Confidence 8766555544444433332222 345567788899999999999999999999999999999999999999
Q ss_pred hhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEe
Q 002768 266 AIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEV 345 (883)
Q Consensus 266 aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l 345 (883)
++|.+.++++++||||||||+|+++|.+.. ......+..+++.+++..+. ...||+.+|++.++.+..........+
T Consensus 575 ~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~--~~~~~~~~~e~l~~v~a~Es-~SeHPig~AIv~yak~~~~~~~~~~~~ 651 (951)
T KOG0207|consen 575 ALEKAHKVKTVVFDKTGTLTEGKPTVVDFK--SLSNPISLKEALALVAAMES-GSEHPIGKAIVDYAKEKLVEPNPEGVL 651 (951)
T ss_pred HHHHHhcCCEEEEcCCCceecceEEEEEEE--ecCCcccHHHHHHHHHHHhc-CCcCchHHHHHHHHHhcccccCccccc
Confidence 999999999999999999999999999865 34433566666666555443 456899999999986543111111122
Q ss_pred EeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCC
Q 002768 346 HFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGG 425 (883)
Q Consensus 346 ~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~ 425 (883)
++..|....+...+. .+|+. ++-|+-+.+...-. ...+.+++.+++....|..+.++++.+
T Consensus 652 ~~~~~pg~g~~~~~~---~~~~~--i~iGN~~~~~r~~~---~~~~~i~~~~~~~e~~g~tvv~v~vn~----------- 712 (951)
T KOG0207|consen 652 SFEYFPGEGIYVTVT---VDGNE--VLIGNKEWMSRNGC---SIPDDILDALTESERKGQTVVYVAVNG----------- 712 (951)
T ss_pred eeecccCCCcccceE---EeeeE--EeechHHHHHhcCC---CCchhHHHhhhhHhhcCceEEEEEECC-----------
Confidence 333333333221122 23444 55698887765322 234457788888889999999999988
Q ss_pred CceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHH
Q 002768 426 PWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIE 505 (883)
Q Consensus 426 ~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~ 505 (883)
+++|++.++|++|+|+..+|+.||++||++.|+||||..+|+++|+++|+.
T Consensus 713 --~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--------------------------- 763 (951)
T KOG0207|consen 713 --QLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID--------------------------- 763 (951)
T ss_pred --EEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc---------------------------
Confidence 899999999999999999999999999999999999999999999999974
Q ss_pred hcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHH
Q 002768 506 EADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSR 585 (883)
Q Consensus 506 ~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR 585 (883)
+|||++.|+||.++|+.+|++++.|+|+|||+||+|||.+||||||||.|+|+|.++|||||+.+|+..++.+|+.+|
T Consensus 764 --~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAieaADIVLmrn~L~~v~~ai~LSr 841 (951)
T KOG0207|consen 764 --NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIEAADIVLMRNDLRDVPFAIDLSR 841 (951)
T ss_pred --eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHhhCCEEEEccchhhhHHHHHHHH
Confidence 479999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHH
Q 002768 586 AIFQRMKNY 594 (883)
Q Consensus 586 ~~~~~i~~~ 594 (883)
++++|+|.+
T Consensus 842 kt~~rIk~N 850 (951)
T KOG0207|consen 842 KTVKRIKLN 850 (951)
T ss_pred HHHhhHHHH
Confidence 999999977
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-78 Score=708.33 Aligned_cols=459 Identities=38% Similarity=0.562 Sum_probs=404.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEe
Q 002768 48 VCLLLINSTISFIEENNAGNAAAALMA--HLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKID 125 (883)
Q Consensus 48 ~~~~li~~~i~~~~e~~a~~~~~~L~~--~~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vd 125 (883)
+++++++..++.+++++++++.+.|.+ ..+++++|+||| +++|++++|+|||+|.+++||+|||||+|++|+. .||
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~~-~vd 80 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGSC-FVD 80 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEccE-EEE
Confidence 456678899999999999999999998 788899999999 9999999999999999999999999999999974 999
Q ss_pred ccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHH-HHHHHHHHH
Q 002768 126 QASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIG-NFCICSIAV 203 (883)
Q Consensus 126 e~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~-~~~~~~i~i 203 (883)
| |+|||||.|+.|++||.+|+||.+.+|++++.|+++|.+|..+++..++.+. ..++++++..+++. .+++..+++
T Consensus 81 e--s~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 158 (499)
T TIGR01494 81 E--SNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLL 158 (499)
T ss_pred c--ccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHH
Confidence 9 9999999999999999999999999999999999999999999999999877 44788999999998 454443333
Q ss_pred HHHHHHHhHhhcccC--chHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCc
Q 002768 204 GMILEIIVMFPIQHR--SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 281 (883)
Q Consensus 204 ~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKT 281 (883)
+.++.++.++..... +|..++..++++++++|||+||+++++++..+..+|+++|+++|+++++|+||++|++|||||
T Consensus 159 la~~~~~~~~~~~~~~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKT 238 (499)
T TIGR01494 159 IALAVFLFWAIGLWDPNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKT 238 (499)
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCC
Confidence 222222222211112 377889999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceEEEEE
Q 002768 282 GTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361 (883)
Q Consensus 282 GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~ 361 (883)
||||+|+|+|.++.. .+ . .....||++.|++.++.. +.++..||++.++++++++
T Consensus 239 GTLT~~~~~v~~~~~--~~-~--------------~~~s~hp~~~ai~~~~~~--------~~~~~~~f~~~~~~~~~~~ 293 (499)
T TIGR01494 239 GTLTKNEMSFKKVSV--LG-G--------------EYLSGHPDERALVKSAKW--------KILNVFEFSSVRKRMSVIV 293 (499)
T ss_pred CccccCceEEEEEEe--cC-C--------------CcCCCChHHHHHHHHhhh--------cCcceeccCCCCceEEEEE
Confidence 999999999998752 11 0 123568999999887642 1235679999999999888
Q ss_pred EcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCc
Q 002768 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRH 441 (883)
Q Consensus 362 ~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~ 441 (883)
.+.++ .++||+++.+.+.|.. +.+..++++++|+|++++|++. +++|++.++|++|+
T Consensus 294 ~~~~~---~~~~G~~~~i~~~~~~-------~~~~~~~~~~~g~~~~~~a~~~-------------~~~g~i~l~d~lr~ 350 (499)
T TIGR01494 294 RGPDG---TYVKGAPEFVLSRVKD-------LEEKVKELAQSGLRVLAVASKE-------------TLLGLLGLEDPLRD 350 (499)
T ss_pred ecCCc---EEEeCCHHHHHHhhHH-------HHHHHHHHHhCCCEEEEEEECC-------------eEEEEEEecCCCch
Confidence 75323 4689999999998852 2334556788999999999886 79999999999999
Q ss_pred cHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHH
Q 002768 442 DSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEI 521 (883)
Q Consensus 442 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~i 521 (883)
|++++|+.|+++|++++|+|||++.+|..+|+++|| +++++|+||.++
T Consensus 351 ~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi--------------------------------~~~~~p~~K~~~ 398 (499)
T TIGR01494 351 DAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI--------------------------------FARVTPEEKAAL 398 (499)
T ss_pred hHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc--------------------------------eeccCHHHHHHH
Confidence 999999999999999999999999999999999986 688999999999
Q ss_pred HHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 522 VKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 522 V~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
|+.+|++|+.|+|+|||+||+|||++|||||||+ |+++||++|+++++..++.++++||++++++++++
T Consensus 399 v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~ 467 (499)
T TIGR01494 399 VEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNI 467 (499)
T ss_pred HHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999997 78999999999999999999999999999999985
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-77 Score=703.96 Aligned_cols=487 Identities=30% Similarity=0.399 Sum_probs=418.2
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcCC
Q 002768 19 WVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVP 98 (883)
Q Consensus 19 ~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv~ 98 (883)
.++.++++++++. ++|.++.+|+++++++..+++++|+|+++.+++|++..+++++|+|||+++++++++|+|
T Consensus 3 ~l~~~a~~~~~~~-------~~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~ 75 (536)
T TIGR01512 3 LLMALAALGAVAI-------GEYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKV 75 (536)
T ss_pred HHHHHHHHHHHHH-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCC
Confidence 3566777788877 379999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhc
Q 002768 99 GDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVD 178 (883)
Q Consensus 99 GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~ 178 (883)
||+|.+++||+|||||++++|+. .||| |+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|.+||+.++++
T Consensus 76 GDiv~v~~G~~iP~Dg~ii~g~~-~vde--s~lTGEs~pv~k~~g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~ 152 (536)
T TIGR01512 76 GDVVVVKPGERVPVDGVVLSGTS-TVDE--SALTGESVPVEKAPGDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVE 152 (536)
T ss_pred CCEEEEcCCCEeecceEEEeCcE-EEEe--cccCCCCCcEEeCCCCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHH
Confidence 99999999999999999999986 8999 99999999999999999999999999999999999999999999999998
Q ss_pred cc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcc
Q 002768 179 ST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQ 257 (883)
Q Consensus 179 ~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~ 257 (883)
++ .+++++|+.+++++++++..++++.++.+++++.. . .+..++..++++++++|||+||+++++++..+..+++|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 153 EAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL-K-RWPFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-ccHHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 87 67889999999999887665544444433333322 2 233378889999999999999999999999999999999
Q ss_pred eEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHH
Q 002768 258 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKE 337 (883)
Q Consensus 258 ~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~ 337 (883)
|+++|+++++|++|++|++|||||||||+|+|+|.++. ..+++.+++.. +..+.||++.|+++++.+..
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~---------~~~~l~~a~~~-e~~~~hp~~~Ai~~~~~~~~- 299 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVV---------PAEVLRLAAAA-EQASSHPLARAIVDYARKRE- 299 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEee---------HHHHHHHHHHH-hccCCCcHHHHHHHHHHhcC-
Confidence 99999999999999999999999999999999998753 12566666543 34567899999998864321
Q ss_pred HhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccc
Q 002768 338 ARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE 417 (883)
Q Consensus 338 ~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~ 417 (883)
.....+.+|. +..... .+|+.++ .|+++.+.+.. .+++.++|.+++.++.+.
T Consensus 300 ---~~~~~~~~~g----~gi~~~---~~g~~~~--ig~~~~~~~~~-------------~~~~~~~~~~~~~v~~~~--- 351 (536)
T TIGR01512 300 ---NVESVEEVPG----EGVRAV---VDGGEVR--IGNPRSLEAAV-------------GARPESAGKTIVHVARDG--- 351 (536)
T ss_pred ---CCcceEEecC----CeEEEE---ECCeEEE--EcCHHHHhhcC-------------CcchhhCCCeEEEEEECC---
Confidence 2222232221 111111 2455443 58887653321 114567888988887654
Q ss_pred cccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCC-eEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCC
Q 002768 418 MTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV-CVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENE 496 (883)
Q Consensus 418 ~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~ 496 (883)
.++|.+.++|++|||++++|++|+++|+ ++.|+|||+..+|..+++++|+.
T Consensus 352 ----------~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~------------------ 403 (536)
T TIGR01512 352 ----------TYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID------------------ 403 (536)
T ss_pred ----------EEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh------------------
Confidence 8999999999999999999999999999 99999999999999999999984
Q ss_pred cccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-cccHHHhhcccEeecCCChh
Q 002768 497 ALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DATDAARGAADIVLTEPGLS 575 (883)
Q Consensus 497 ~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gtd~ak~aADivL~~~~~~ 575 (883)
++|+++.|++|.++++.+|++++.|+|+|||.||+||+++||+||++| +|++.++++||+++++++++
T Consensus 404 -----------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~ 472 (536)
T TIGR01512 404 -----------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLS 472 (536)
T ss_pred -----------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHH
Confidence 358899999999999999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 002768 576 VIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 576 ~i~~ai~~gR~~~~~i~~~~ 595 (883)
.+.+++++||++++||++++
T Consensus 473 ~l~~~i~~~r~~~~~i~~nl 492 (536)
T TIGR01512 473 RLPQAIRLARRTRRIVKQNV 492 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999985
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-76 Score=701.01 Aligned_cols=505 Identities=28% Similarity=0.397 Sum_probs=424.8
Q ss_pred HHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECC-eEEEEEccCcC
Q 002768 19 WVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREG-QWKEQDAAVLV 97 (883)
Q Consensus 19 ~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg-~~~~i~~~~Lv 97 (883)
.++.++++++++. +.|.++.+|+++++++..+++++++|+++.++.|.+..|++++|+||| +++++++++|+
T Consensus 3 ~l~~~~~~~~~~~-------~~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~ 75 (556)
T TIGR01525 3 LLMALATIAAYAM-------GLVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQ 75 (556)
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCC
Confidence 3456667777776 378899999999999999999999999999999999999999999996 99999999999
Q ss_pred CCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhh
Q 002768 98 PGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLV 177 (883)
Q Consensus 98 ~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~ 177 (883)
|||+|.+++||+|||||+|++|+. .||| |+|||||.|+.|++||.+|+||.+.+|+++++|++||.+|++|++.+++
T Consensus 76 ~GDiv~v~~G~~iP~Dg~vi~g~~-~vde--s~lTGEs~pv~k~~g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~ 152 (556)
T TIGR01525 76 VGDIVIVRPGERIPVDGVVISGES-EVDE--SALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLV 152 (556)
T ss_pred CCCEEEECCCCEeccceEEEecce-EEee--hhccCCCCCEecCCcCEEeeceEECCceEEEEEEEecccCHHHHHHHHH
Confidence 999999999999999999999985 8999 9999999999999999999999999999999999999999999999999
Q ss_pred ccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhc
Q 002768 178 DST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQ 256 (883)
Q Consensus 178 ~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k 256 (883)
+++ ..++++|+.+++++++++..++++.++.+++++. .... .++..++++++++|||+||++++++++.+..+|++
T Consensus 153 ~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~-~~~~--~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~ 229 (556)
T TIGR01525 153 EEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLA-LGAL--GALYRALAVLVVACPCALGLATPVAILVAIGVAAR 229 (556)
T ss_pred HHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccc--hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHH
Confidence 876 6788999999999988765444433333333322 2222 77889999999999999999999999999999999
Q ss_pred ceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCC--hHHHHHHHHHHhccccCChHHHHHHHHhCC
Q 002768 257 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMD--KDMIVLLAARAARLENQDAIDAAIINMLAD 334 (883)
Q Consensus 257 ~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~--~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~ 334 (883)
+|+++|+++++|+||++|++|||||||||+|+|+|.++.. .. +.+ +++++.+++..+. ...||++.|+++++.+
T Consensus 230 ~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~--~~-~~~~~~~~~l~~a~~~e~-~~~hp~~~Ai~~~~~~ 305 (556)
T TIGR01525 230 RGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEP--LD-DASISEEELLALAAALEQ-SSSHPLARAIVRYAKK 305 (556)
T ss_pred CCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEe--cC-CCCccHHHHHHHHHHHhc-cCCChHHHHHHHHHHh
Confidence 9999999999999999999999999999999999988652 22 233 5667776665544 4568999999988653
Q ss_pred hHHHhhccc-EeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeee
Q 002768 335 PKEARANIK-EVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQ 413 (883)
Q Consensus 335 ~~~~~~~~~-~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~ 413 (883)
....... + ..+.+| .+..... .+|. ..+..|+++.+ +. .. .+ ..+.++.++++.++|+|+++++.+
T Consensus 306 ~~~~~~~-~~~~~~~~----~~gi~~~---~~g~-~~~~lg~~~~~-~~-~~-~~-~~~~~~~~~~~~~~g~~~~~v~~~ 372 (556)
T TIGR01525 306 RGLELPK-QEDVEEVP----GKGVEAT---VDGQ-EEVRIGNPRLL-EL-AA-EP-ISASPDLLNEGESQGKTVVFVAVD 372 (556)
T ss_pred cCCCccc-ccCeeEec----CCeEEEE---ECCe-eEEEEecHHHH-hh-cC-CC-chhhHHHHHHHhhCCcEEEEEEEC
Confidence 2110000 1 111221 1112221 1341 23445888766 21 11 11 122345567788999999999986
Q ss_pred cccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCC-CeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCC
Q 002768 414 EVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLG-VCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDK 492 (883)
Q Consensus 414 ~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aG-I~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~ 492 (883)
. +++|.+.++|++|||++++|++|+++| +++.|+|||+..++.++++++|+.
T Consensus 373 ~-------------~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~-------------- 425 (556)
T TIGR01525 373 G-------------ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID-------------- 425 (556)
T ss_pred C-------------EEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC--------------
Confidence 5 899999999999999999999999999 999999999999999999999994
Q ss_pred CCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCC
Q 002768 493 DENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEP 572 (883)
Q Consensus 493 ~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~ 572 (883)
++|+++.|++|.++++.+|+.|+.|+|+|||.||+||+++|||||++|++++.++++||+++.++
T Consensus 426 ---------------~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~vi~~~ 490 (556)
T TIGR01525 426 ---------------EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADIVLLND 490 (556)
T ss_pred ---------------eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCEEEeCC
Confidence 36899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHH
Q 002768 573 GLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 573 ~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
+++.+++++++||++++||++++
T Consensus 491 ~~~~l~~~i~~~r~~~~~i~~nl 513 (556)
T TIGR01525 491 DLSSLPTAIDLSRKTRRIIKQNL 513 (556)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-76 Score=692.38 Aligned_cols=478 Identities=28% Similarity=0.426 Sum_probs=405.8
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC-CeEEEEEccCcCCCcEEEEeCCCeecccEEEEe
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE-GQWKEQDAAVLVPGDIISIKLGDIIPADARLLE 118 (883)
Q Consensus 40 ~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd-g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~ 118 (883)
+|.+..+++++++++..++.+.++|+++++++|++..|++++++|+ |++++|++++|+|||+|.+++||+|||||+|++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4555666677888888889888999999999999999999999985 677999999999999999999999999999999
Q ss_pred eCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHH
Q 002768 119 GDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFC 197 (883)
Q Consensus 119 g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~ 197 (883)
|+. .||| |+|||||.|+.|++||.||+||.+.+|+++++|+++|.+|.+||+.++++++ .+++++|+..+++++++
T Consensus 133 g~~-~vde--s~lTGEs~pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~ 209 (562)
T TIGR01511 133 GES-EVDE--SLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYF 209 (562)
T ss_pred Cce-EEeh--HhhcCCCCcEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 996 8999 9999999999999999999999999999999999999999999999999887 67899999999999887
Q ss_pred HHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEE
Q 002768 198 ICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 277 (883)
Q Consensus 198 ~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~ 277 (883)
+..++++.++.+ +.| ..++..++++++++|||+|++++|+++..+..+++++|+++|+++++|+|+++|++|
T Consensus 210 ~~~v~~~a~~~~-~~~-------~~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~ 281 (562)
T TIGR01511 210 VPVVIAIALITF-VIW-------LFALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVV 281 (562)
T ss_pred HHHHHHHHHHHH-HHH-------HHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEE
Confidence 655444333322 222 247889999999999999999999999999999999999999999999999999999
Q ss_pred eCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCceE
Q 002768 278 SDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRT 357 (883)
Q Consensus 278 ~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~ 357 (883)
||||||||+|+|+|.++. ... +.++++++.+++..+. .+.||+++|+++++.+........+..+.+| .+..
T Consensus 282 fDKTGTLT~g~~~v~~i~--~~~-~~~~~~~l~~aa~~e~-~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~----g~Gi 353 (562)
T TIGR01511 282 FDKTGTLTQGKPTVTDVH--VFG-DRDRTELLALAAALEA-GSEHPLAKAIVSYAKEKGITLVEVSDFKAIP----GIGV 353 (562)
T ss_pred ECCCCCCcCCCEEEEEEe--cCC-CCCHHHHHHHHHHHhc-cCCChHHHHHHHHHHhcCCCcCCCCCeEEEC----CceE
Confidence 999999999999999864 222 4566777777766554 3458999999988643211001112222222 1122
Q ss_pred EEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCC
Q 002768 358 AITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFD 437 (883)
Q Consensus 358 sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D 437 (883)
... .+|+. +..|+++.+.+... . ++++.++|.+++.++.+. +++|++.++|
T Consensus 354 ~~~---~~g~~--~~iG~~~~~~~~~~---~--------~~~~~~~g~~~~~~~~~~-------------~~~g~~~~~d 404 (562)
T TIGR01511 354 EGT---VEGTK--IQLGNEKLLGENAI---K--------IDGKAEQGSTSVLVAVNG-------------ELAGVFALED 404 (562)
T ss_pred EEE---ECCEE--EEEECHHHHHhCCC---C--------CChhhhCCCEEEEEEECC-------------EEEEEEEecc
Confidence 222 24543 45699887643211 0 113457899999998765 8999999999
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++|||++++|++|++.|+++.|+|||+..++..+++++||. +|+++.|++
T Consensus 405 ~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------~~~~~~p~~ 454 (562)
T TIGR01511 405 QLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------------------------VRAEVLPDD 454 (562)
T ss_pred cccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------------------------EEccCChHH
Confidence 99999999999999999999999999999999999999982 478889999
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
|.++++.+|++++.|+|+|||.||+||+++||+||+||+|++.++++||+++.+++++.+++++++||++++||++++
T Consensus 455 K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~ 532 (562)
T TIGR01511 455 KAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNL 532 (562)
T ss_pred HHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999984
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-75 Score=718.20 Aligned_cols=491 Identities=24% Similarity=0.354 Sum_probs=417.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEee
Q 002768 40 DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEG 119 (883)
Q Consensus 40 ~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g 119 (883)
+|.+..+++++++++..++...+.|+.+++++|.++.|++++++|||++++|+.++|+|||+|.+++||+|||||+|++|
T Consensus 285 ~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g 364 (834)
T PRK10671 285 YYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG 364 (834)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEc
Confidence 33446788888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHH
Q 002768 120 DPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCI 198 (883)
Q Consensus 120 ~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~ 198 (883)
+. .||| |+|||||.|+.|++||.||+||.+.+|.++++|+++|.+|.+|||.++++++ ..++++|+..++++++++
T Consensus 365 ~~-~vde--S~lTGEs~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v 441 (834)
T PRK10671 365 EA-WLDE--AMLTGEPIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFV 441 (834)
T ss_pred eE-EEee--hhhcCCCCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHH
Confidence 75 9999 9999999999999999999999999999999999999999999999999987 678899999999998866
Q ss_pred HHHHHHHHHHHHhHhhcccC--chHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEE
Q 002768 199 CSIAVGMILEIIVMFPIQHR--SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVL 276 (883)
Q Consensus 199 ~~i~i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i 276 (883)
..++++.++.+++ |.+.+. .+..++..++++++++|||||++++|+++..+..+++|+|+++|+.+++|+|+++|++
T Consensus 442 ~~v~~~a~~~~~~-~~~~~~~~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v 520 (834)
T PRK10671 442 PVVVVIALVSAAI-WYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTL 520 (834)
T ss_pred HHHHHHHHHHHHH-HHHhCCchHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEE
Confidence 5444433333322 322222 2556778899999999999999999999999999999999999999999999999999
Q ss_pred EeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCCCCce
Q 002768 277 CSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKR 356 (883)
Q Consensus 277 ~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~ 356 (883)
|||||||||+|+|+|.+.. .. .+.++++++.+++..+. ...||+++|+++++.+. .... ..+|.....+
T Consensus 521 ~fDKTGTLT~g~~~v~~~~--~~-~~~~~~~~l~~a~~~e~-~s~hp~a~Ai~~~~~~~-----~~~~--~~~~~~~~g~ 589 (834)
T PRK10671 521 VFDKTGTLTEGKPQVVAVK--TF-NGVDEAQALRLAAALEQ-GSSHPLARAILDKAGDM-----TLPQ--VNGFRTLRGL 589 (834)
T ss_pred EEcCCCccccCceEEEEEE--cc-CCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHhhC-----CCCC--cccceEecce
Confidence 9999999999999998754 22 24566777777666544 45689999998875321 1111 1122222111
Q ss_pred EEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCC
Q 002768 357 TAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLF 436 (883)
Q Consensus 357 ~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~ 436 (883)
.+... .+|+. +.+|+++.+.+.... .+.+.+.++++.++|.++++++++. .++|++.+.
T Consensus 590 -Gv~~~-~~g~~--~~~G~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~v~va~~~-------------~~~g~~~l~ 648 (834)
T PRK10671 590 -GVSGE-AEGHA--LLLGNQALLNEQQVD----TKALEAEITAQASQGATPVLLAVDG-------------KAAALLAIR 648 (834)
T ss_pred -EEEEE-ECCEE--EEEeCHHHHHHcCCC----hHHHHHHHHHHHhCCCeEEEEEECC-------------EEEEEEEcc
Confidence 11111 25554 456999977543221 2345666778889999999999876 799999999
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
|++|||++++|++|++.|+++.|+|||+..+|..+++++||. ++|+++.|+
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~-----------------------------~~~~~~~p~ 699 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID-----------------------------EVIAGVLPD 699 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC-----------------------------EEEeCCCHH
Confidence 999999999999999999999999999999999999999985 368999999
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHHHHHHHHHHHHH
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT 595 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~~ 595 (883)
+|.++++.+|++|+.|+|+|||+||+|||++||+||+||+|+|.++++||+++++++++.|..++++||++++||++++
T Consensus 700 ~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl 778 (834)
T PRK10671 700 GKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNL 778 (834)
T ss_pred HHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999984
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-78 Score=730.60 Aligned_cols=768 Identities=16% Similarity=0.189 Sum_probs=543.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEEC
Q 002768 6 FLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKVLRE 85 (883)
Q Consensus 6 ~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V~Rd 85 (883)
.+.+++||.++.++++++.++++++. .+ +...|...+++++++.+.++.+.+|++|+.+....++ ..+++|.|+
T Consensus 49 Pk~l~eQf~r~aN~yFl~~~il~~ip-~~--~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN---~~~~~v~~~ 122 (1151)
T KOG0206|consen 49 PKNLFEQFHRVANLYFLFIAILQFIP-LS--PFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVN---NRKVEVLRG 122 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCc-cc--ccCccceeeceeeeehHHHHHHHHhhhhhhhccHHhh---cceeEEecC
Confidence 46788999999999999999999998 43 2246777888888889999999999999999887665 478999996
Q ss_pred Ce-EEEEEccCcCCCcEEEEeCCCeecccEEEEeeCC----eeEeccccccCCccccccccC------------------
Q 002768 86 GQ-WKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQASSALTGESLPVTKKT------------------ 142 (883)
Q Consensus 86 g~-~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----l~Vde~es~LTGEs~pv~K~~------------------ 142 (883)
+. +++..|++|++||+|.+..++.+|||.+|++++. ++|++ ++|+||++.+.|+.
T Consensus 123 ~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT--~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~ 200 (1151)
T KOG0206|consen 123 DGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVET--ANLDGETNLKVKQALECTSKLDSEDSLKNFKG 200 (1151)
T ss_pred CceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEE--eecCCccccceeeehhhhhcccccccccccCC
Confidence 44 8999999999999999999999999999998764 79999 99999999887753
Q ss_pred -----------------------------CCeeeeeeeEeeCc-eEEEEEEccchhhhhhHhhhhccccccChHHHHHHH
Q 002768 143 -----------------------------ADEVFSGSTCKHGE-IEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTS 192 (883)
Q Consensus 143 -----------------------------g~~v~aGs~v~~G~-~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~ 192 (883)
.+.++.|+.+++.+ +.++|+.||.+|++++-... ...+++.+++.++.
T Consensus 201 ~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~~n~~~--~~~Krs~ier~~n~ 278 (1151)
T KOG0206|consen 201 WIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLMQNSGK--PPSKRSRIERKMNK 278 (1151)
T ss_pred ceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHHHhcCC--Cccccchhhhhhhh
Confidence 12467888888765 79999999999987664333 33667788999888
Q ss_pred HHHHHHHHHHHHHHHHHHhHhhccc-------------C-----chHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhh
Q 002768 193 IGNFCICSIAVGMILEIIVMFPIQH-------------R-----SYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRL 254 (883)
Q Consensus 193 i~~~~~~~i~i~~~~~~~~~~~~~~-------------~-----~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l 254 (883)
+...+++.++..+++..+....... . .....+..++.++...+|++|++.+.+....++..+
T Consensus 279 ~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi 358 (1151)
T KOG0206|consen 279 IIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFI 358 (1151)
T ss_pred hHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHc
Confidence 7665444333333322221111000 0 011234456678889999999999999999887544
Q ss_pred h----------cceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCCh-------------------
Q 002768 255 S----------QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDK------------------- 305 (883)
Q Consensus 255 ~----------k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~------------------- 305 (883)
. ...+.+|+.+..|+||++++|++|||||||+|.|++.+|.+....++...
T Consensus 359 ~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~ 438 (1151)
T KOG0206|consen 359 NNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHK 438 (1151)
T ss_pred chHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccc
Confidence 3 35789999999999999999999999999999999999987532221110
Q ss_pred -------------------------HHHHHHHHHHh-cc------------ccCChHHHHHHHHhCChH-----------
Q 002768 306 -------------------------DMIVLLAARAA-RL------------ENQDAIDAAIINMLADPK----------- 336 (883)
Q Consensus 306 -------------------------~~~l~~a~~~~-~~------------~~~~~~~~ai~~~~~~~~----------- 336 (883)
.+.....+.|. .. +-+.|.+.|++..+.+..
T Consensus 439 ~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~v 518 (1151)
T KOG0206|consen 439 IKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSV 518 (1151)
T ss_pred cccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceE
Confidence 01122222221 11 113577888887654211
Q ss_pred -----HHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhh-ccHHHHHHHHHHHHHHHhcCCeEeEE
Q 002768 337 -----EARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCK-EKKEIAVKVHTIIDKFAERGLRSLAV 410 (883)
Q Consensus 337 -----~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~-~~~~~~~~~~~~~~~~a~~G~R~l~v 410 (883)
.....|+.++.++|+|.||||||++++++|+..++||||+.+|.++++ +.....++..+++++|+.+|+|+|++
T Consensus 519 ti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~ 598 (1151)
T KOG0206|consen 519 TIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKLREKTQEHLEEYATEGLRTLCL 598 (1151)
T ss_pred EEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhh
Confidence 013578999999999999999999999999999999999999999998 44567788899999999999999999
Q ss_pred eeeccccccc-------------------------CCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcH
Q 002768 411 AIQEVSEMTK-------------------------ESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQL 465 (883)
Q Consensus 411 A~~~~~~~~~-------------------------~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~ 465 (883)
||++++++++ +..|++|+++|.+++||++++++||+|+.|++||||+||+|||+.
T Consensus 599 A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ 678 (1151)
T KOG0206|consen 599 AYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQ 678 (1151)
T ss_pred hhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHH
Confidence 9999987542 357999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCCCCccc---------------------------------------------CCCCCCC-Cc--
Q 002768 466 AIAKETGRRLGMATNMYPSSSLL---------------------------------------------GRDKDEN-EA-- 497 (883)
Q Consensus 466 ~tA~~ia~~lGi~~~~~~~~~l~---------------------------------------------g~~~~~~-~~-- 497 (883)
+||.+||..|++..+......+. |+.+... ++
T Consensus 679 ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~ 758 (1151)
T KOG0206|consen 679 ETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDEL 758 (1151)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchh
Confidence 99999999999976533211111 1110000 00
Q ss_pred -ccHHHHHHhc--CcEEEeChhhHHHHHHHHhh-cCCEEEEEcCCcCCHHhhhhCCeeEEec--cccHHHhhcccEeecC
Q 002768 498 -LPVDELIEEA--DGFAGVFPEHKYEIVKILQE-KKHVVGMTGDGVNDAPALKKADIGIAVA--DATDAARGAADIVLTE 571 (883)
Q Consensus 498 -~~~~~~~~~~--~vfar~~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapALk~AdVGIam~--~gtd~ak~aADivL~~ 571 (883)
..+-++...+ .+|||++|.||+.+|+..++ .+.+++++|||+||.+|++.|||||+++ +|.+|++ +||+.+.+
T Consensus 759 ~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvm-sSD~AIaq 837 (1151)
T KOG0206|consen 759 RKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVM-SSDFAIAQ 837 (1151)
T ss_pred hHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhh-cccchHHH
Confidence 0112333333 38999999999999999974 6889999999999999999999999996 6777776 99999988
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHhhc--------CCCChHHHHHHHHHhhhh-hccccc-----
Q 002768 572 PGLSVIISAVLTSRAIFQRMKNYTLG-------FVLLALIWE--------YDFPPFMVLIIAILNDGT-IMTISK----- 630 (883)
Q Consensus 572 ~~~~~i~~ai~~gR~~~~~i~~~~~~-------~~~~~~~~~--------~~~~~~~il~i~~~~d~~-~~~l~~----- 630 (883)
..|..-. ++.|||+.|.|+.+++++ |.+..+.+. ..|.++.+.+.|++...+ ++.+|.
T Consensus 838 FrfL~rL-LLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDv 916 (1151)
T KOG0206|consen 838 FRFLERL-LLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDV 916 (1151)
T ss_pred HHHHhhh-heeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCC
Confidence 8887643 345799999999998722 222222221 123444455555544333 355542
Q ss_pred --------CCCCCCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCChHHHHHHHHHHHHHH
Q 002768 631 --------DRVKPSPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSII 702 (883)
Q Consensus 631 --------d~~~~~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 702 (883)
|..+.+.+.+..++.+.|+.|++.|.+.+++.|++.+..+....+. .-|. +.+.....++++-.+.+.
T Consensus 917 sa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~-~~G~---~~d~~~~G~~~~T~~Viv 992 (1151)
T KOG0206|consen 917 SAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVT-SNGL---TADYWTLGTTVFTIIVIV 992 (1151)
T ss_pred CHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeec-cCCC---cCChhhccceEEEEEEEE
Confidence 3333333444555678899999999999999987777665432111 1111 001111222222111111
Q ss_pred HHHHHHHHhcCCCccccchhHHHHHHHHHHHHHHHH--HHHhh----cccccccCcchhhHHHHHHHHHHHHHHHHHHHH
Q 002768 703 SQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATL--IAVYA----HISFAYISGVGWGWAGVIWLYSFVFYIPLDVIK 776 (883)
Q Consensus 703 ~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K 776 (883)
.... ...-+..|.|.+.-.+|+.+++.+......- .+... ..+++.....+..+|+++++..+++++|+.++|
T Consensus 993 v~~~-iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~ 1071 (1151)
T KOG0206|consen 993 VNLK-IALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYK 1071 (1151)
T ss_pred EEee-eeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHH
Confidence 1111 1122346666655444444433322111100 00000 012223344556789999999999999999999
Q ss_pred HHHHHhcccchhhh
Q 002768 777 FIVRYALSGEAWNL 790 (883)
Q Consensus 777 ~~~~~~~~~~~~~~ 790 (883)
++.+.++|...+..
T Consensus 1072 ~l~~~~~Pt~~~~i 1085 (1151)
T KOG0206|consen 1072 SLQRTFFPTDHDII 1085 (1151)
T ss_pred HHHHhhCCcHHHHH
Confidence 99999998755544
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-72 Score=615.24 Aligned_cols=734 Identities=20% Similarity=0.253 Sum_probs=493.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC-ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeE-EEE
Q 002768 7 LKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGP-DWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTK-VLR 84 (883)
Q Consensus 7 ~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~-~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~-V~R 84 (883)
..+..||+-++++++++.++.+++.....|... +|...+.++.+.++-..++.++++++.+.. + ..+.+ .-|
T Consensus 97 ~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~---N---se~y~~ltr 170 (1051)
T KOG0210|consen 97 AVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDREL---N---SEKYTKLTR 170 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhh---h---hhhheeecc
Confidence 346678888888888888888877655444322 444444444444455555555555554432 2 23434 447
Q ss_pred CCeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCC----eeEeccccccCCccccccccC------------------
Q 002768 85 EGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP----LKIDQASSALTGESLPVTKKT------------------ 142 (883)
Q Consensus 85 dg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~----l~Vde~es~LTGEs~pv~K~~------------------ 142 (883)
||...+ |+++|++||+|.++.+++||||.++++.+. +.+-+ -.|+||+.-+-|-|
T Consensus 171 ~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRT--DQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v 247 (1051)
T KOG0210|consen 171 DGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRT--DQLDGETDWKLRLPVPRTQHLTEDSELMEISV 247 (1051)
T ss_pred CCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEec--cccCCcccceeeccchhhccCCcccchheEEE
Confidence 776555 999999999999999999999999997542 56777 56999997554432
Q ss_pred -----------------------------CCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc---cccChHHHHH
Q 002768 143 -----------------------------ADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST---EVVGHFQQVL 190 (883)
Q Consensus 143 -----------------------------g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~---~~~~~~~~~~ 190 (883)
.+++.++|.+.+|.++|+|++||.+|+ ..++.+ .+.+.++..+
T Consensus 248 ~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtR-----svMNts~pr~KvGllelEi 322 (1051)
T KOG0210|consen 248 YAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTR-----SVMNTSRPRSKVGLLELEI 322 (1051)
T ss_pred eccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHH-----HHhccCCcccccceeeeec
Confidence 256999999999999999999999996 334433 4556788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcc----eEEecchhh
Q 002768 191 TSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQ----GAITKRMTA 266 (883)
Q Consensus 191 ~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~----~ilvk~~~a 266 (883)
|.+.+.+.+.+.++.++ ++.....+.+|...+.+++.++...||++|-+.+.++...-++.+.+. |.++|+.+.
T Consensus 323 N~ltKiL~~~vlvLs~v--mv~~~g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstI 400 (1051)
T KOG0210|consen 323 NGLTKILFCFVLVLSIV--MVAMKGFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTI 400 (1051)
T ss_pred ccHHHHHHHHHHHHHHH--HHHhhcCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCC
Confidence 99988876654443332 233344567888889999999999999999999999999988888763 789999999
Q ss_pred hhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCCh-----------------------------------HHHHHH
Q 002768 267 IEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDK-----------------------------------DMIVLL 311 (883)
Q Consensus 267 iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~-----------------------------------~~~l~~ 311 (883)
-|+||+++++.+|||||||+|+|.+++++......+.+. +.+..+
T Consensus 401 PEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~al 480 (1051)
T KOG0210|consen 401 PEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLAL 480 (1051)
T ss_pred hHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHH
Confidence 999999999999999999999999999886432211110 112222
Q ss_pred HHHHhcc---cc--------CChHHHHHHHHh-----------------CChHHHhhcccEeEeecCCCCCceEEEEEEc
Q 002768 312 AARAARL---EN--------QDAIDAAIINML-----------------ADPKEARANIKEVHFLPFNPVDKRTAITYID 363 (883)
Q Consensus 312 a~~~~~~---~~--------~~~~~~ai~~~~-----------------~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~ 363 (883)
|.++... ++ .+|.+.|+++.- ..+......|+++..+||+|+.|||.+++++
T Consensus 481 alCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~ 560 (1051)
T KOG0210|consen 481 ALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRD 560 (1051)
T ss_pred HHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEec
Confidence 2222211 11 123344433321 0111113468999999999999999999997
Q ss_pred C-CCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccC---------------------
Q 002768 364 S-DGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE--------------------- 421 (883)
Q Consensus 364 ~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~--------------------- 421 (883)
+ +|+...+.|||+.++-...+.+ +.+++....||++|+|+|.+|.+.+++++++
T Consensus 561 e~~~evtfylKGAD~VMs~iVq~N----dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma 636 (1051)
T KOG0210|consen 561 ETTEEVTFYLKGADVVMSGIVQYN----DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMA 636 (1051)
T ss_pred CCCceEEEEEecchHHHhcccccc----hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHH
Confidence 5 6899999999999988776544 3455566789999999999999998765421
Q ss_pred -----CCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCc----------
Q 002768 422 -----SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSS---------- 486 (883)
Q Consensus 422 -----~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~---------- 486 (883)
.+|.|++++|+.+.||++++|++.+++.||+|||+|||+|||+.+||..||+..++........+
T Consensus 637 ~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~da 716 (1051)
T KOG0210|consen 637 NVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDA 716 (1051)
T ss_pred HHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHH
Confidence 36899999999999999999999999999999999999999999999999999999654221111
Q ss_pred ----------------ccCCCCCCC---CcccHHHHHHhc--CcEEEeChhhHHHHHHHHhh-cCCEEEEEcCCcCCHHh
Q 002768 487 ----------------LLGRDKDEN---EALPVDELIEEA--DGFAGVFPEHKYEIVKILQE-KKHVVGMTGDGVNDAPA 544 (883)
Q Consensus 487 ----------------l~g~~~~~~---~~~~~~~~~~~~--~vfar~~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapA 544 (883)
+.|+.++-- -+.++.|+..+. .++||++|+||+++++.+|+ .|..|+++|||-||..|
T Consensus 717 h~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsM 796 (1051)
T KOG0210|consen 717 HNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSM 796 (1051)
T ss_pred HHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchh
Confidence 111111100 012334444333 48999999999999999998 58999999999999999
Q ss_pred hhhCCeeEEe-c-cccHHHhhcccEeecCCChhHHHHHH-HHHHHHHHHHHHHH-------HHHHHHHHhh--cCCCChH
Q 002768 545 LKKADIGIAV-A-DATDAARGAADIVLTEPGLSVIISAV-LTSRAIFQRMKNYT-------LGFVLLALIW--EYDFPPF 612 (883)
Q Consensus 545 Lk~AdVGIam-~-~gtd~ak~aADivL~~~~~~~i~~ai-~~gR~~~~~i~~~~-------~~~~~~~~~~--~~~~~~~ 612 (883)
+++||+||++ | +|.+| .-|||+.+++ |+.+-+++ -+||..|+|-.+.. +........| .+.|.|+
T Consensus 797 Iq~A~~GiGI~gkEGkQA-SLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V 873 (1051)
T KOG0210|consen 797 IQAADVGIGIVGKEGKQA-SLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPV 873 (1051)
T ss_pred eeecccceeeeccccccc-chhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcch
Confidence 9999999999 5 56555 4599999965 78877766 47999999987643 1111111111 1223332
Q ss_pred -------HHHHHHHHhhhhhcccccCCCC--------C----CCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 002768 613 -------MVLIIAILNDGTIMTISKDRVK--------P----SPRPDSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTD 673 (883)
Q Consensus 613 -------~il~i~~~~d~~~~~l~~d~~~--------~----~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 673 (883)
++.+..+-+-.+.+.+-.|+.- | .-...+...-+-|..|+++.+|++.+...++++...+.
T Consensus 874 ~LyqG~LmvgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~~e 953 (1051)
T KOG0210|consen 874 ALYQGFLMVGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFDTE 953 (1051)
T ss_pred HHhhhhHHHHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhhhh
Confidence 2222222222222455555431 1 11222333346688888999999887776555544332
Q ss_pred ccccccccccCCCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccccchhHHHHHHHHHHHHHHH-HHHHhhccccc-ccC
Q 002768 674 FFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVAT-LIAVYAHISFA-YIS 751 (883)
Q Consensus 674 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~r~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~-~~~ 751 (883)
|+ + ..++.|+..+...++....-.+.|.| .++++-+++..+.. .+++. .+++ .-.
T Consensus 954 f~----~-----------ivaisFtaLi~tELiMVaLtv~tw~~------~m~vae~lsL~~Yivsl~~l--~~yfd~~f 1010 (1051)
T KOG0210|consen 954 FI----H-----------IVAISFTALILTELIMVALTVRTWHW------LMVVAELLSLALYIVSLAFL--HEYFDRYF 1010 (1051)
T ss_pred he----E-----------eeeeeeHHHHHHHHHHHhhhhhhhhH------HHHHHHHHHHHHHHHHHHHH--HhHHHHHH
Confidence 22 1 11222333333443221112223432 22232222211110 01111 1111 112
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 002768 752 GVGWGWAGVIWLYSFVFYIPLDVIKFIVRYALSGE 786 (883)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~ 786 (883)
-.+|.+.+.+.++.++..+|..+.|++.|++-|+.
T Consensus 1011 ~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpS 1045 (1051)
T KOG0210|consen 1011 ILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPS 1045 (1051)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 24566667777888888999999999999988754
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-67 Score=587.12 Aligned_cols=534 Identities=24% Similarity=0.302 Sum_probs=399.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEE
Q 002768 3 ENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAPKTKV 82 (883)
Q Consensus 3 ~~~~~~~l~~~~~~~~~~l~~aail~~~~~~~~~~~~~~~~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~~~V 82 (883)
+.+-..|.+.-..|+.........++..- .+|+..+.-+++++....--..|+.+.-+..... ...+....|
T Consensus 186 PtF~eLFkE~A~aPfFVFQVFcvgLWCLD-------eyWYySlFtLfMli~fE~tlV~Qrm~~lse~R~M-g~kpy~I~v 257 (1160)
T KOG0209|consen 186 PTFSELFKEHAVAPFFVFQVFCVGLWCLD-------EYWYYSLFTLFMLIAFEATLVKQRMRTLSEFRTM-GNKPYTINV 257 (1160)
T ss_pred ccHHHHHHHhccCceeeHhHHhHHHHHhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEE
Confidence 35566777888889888877777776654 4787776666655544333334444433333322 234567899
Q ss_pred EECCeEEEEEccCcCCCcEEEEeC---CCeecccEEEEeeCCeeEeccccccCCccccccccCC----------------
Q 002768 83 LREGQWKEQDAAVLVPGDIISIKL---GDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---------------- 143 (883)
Q Consensus 83 ~Rdg~~~~i~~~~Lv~GDiv~l~~---Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---------------- 143 (883)
.|+++|+.+.++||.|||+|.+.. ...||||.+|+.|++ .||| ++|||||.|.-|.+-
T Consensus 258 ~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc-iVnE--aMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k 334 (1160)
T KOG0209|consen 258 YRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC-IVNE--AMLTGESVPLMKESIELRDSDDILDIDRDDK 334 (1160)
T ss_pred EecCcceeccccccCCCceEEeccCcccCcCCceEEEEecce-eech--hhhcCCCccccccccccCChhhhcccccccc
Confidence 999999999999999999999987 568999999999997 7999 999999999999761
Q ss_pred -CeeeeeeeEee-------------CceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHH-HHHHHHHHHH
Q 002768 144 -DEVFSGSTCKH-------------GEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFC-ICSIAVGMIL 207 (883)
Q Consensus 144 -~~v~aGs~v~~-------------G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~-~~~i~i~~~~ 207 (883)
..+|.||.+++ |.+.+.|++||.+|.-|++.+.+--. ++.+. |..-.++ +..+.+++++
T Consensus 335 ~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf~aervTa-----Nn~Etf~FILFLlVFAia 409 (1160)
T KOG0209|consen 335 LHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILFSAERVTA-----NNRETFIFILFLLVFAIA 409 (1160)
T ss_pred eEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEecceeeee-----ccHHHHHHHHHHHHHHHH
Confidence 35999999875 67999999999999999988765543 33222 1111121 2222222222
Q ss_pred HHHhHhhccc------CchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCc
Q 002768 208 EIIVMFPIQH------RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT 281 (883)
Q Consensus 208 ~~~~~~~~~~------~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKT 281 (883)
...|.+.. ++-..-+.....++...+|..||+-++++.--+...|+|.++.|..+-.+.-.|++|+.|||||
T Consensus 410 --Aa~Yvwv~Gskd~~RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKT 487 (1160)
T KOG0209|consen 410 --AAGYVWVEGSKDPTRSRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKT 487 (1160)
T ss_pred --hhheEEEecccCcchhhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCC
Confidence 12232221 1112234445566778899999999999888888999999999999999999999999999999
Q ss_pred CccccCceeeeEEEEEeccC-------CCChHHHHHHHHHHhc--cc---cCChHHHHHHHHhCChHHH------h----
Q 002768 282 GTLTLNRLTVDRNLIEVFNR-------NMDKDMIVLLAARAAR--LE---NQDAIDAAIINMLADPKEA------R---- 339 (883)
Q Consensus 282 GTLT~n~m~v~~~~i~~~~~-------~~~~~~~l~~a~~~~~--~~---~~~~~~~ai~~~~~~~~~~------~---- 339 (883)
||||...|.|+.+--..... ....+.+..+|++++- .+ -+||+++|.+...+-.-+. +
T Consensus 488 GTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~vlAscHsLv~le~~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~ 567 (1160)
T KOG0209|consen 488 GTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLVLASCHSLVLLEDKLVGDPLEKATLEAVGWNLEKKNSVCPREGNG 567 (1160)
T ss_pred CccccccEEEEecccccCCcccccchhhCCchHHHHHHHHHHHHHhcCcccCChHHHHHHHhcCcccccCcccCCCcCCC
Confidence 99999999998753100010 1122344555555432 22 3699999999886421110 1
Q ss_pred hcccEeEeecCCCCCceEEEEEEcC----CCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecc
Q 002768 340 ANIKEVHFLPFNPVDKRTAITYIDS----DGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEV 415 (883)
Q Consensus 340 ~~~~~l~~~pF~~~~k~~sv~~~~~----~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~ 415 (883)
.+.++.+.+.|+|.-|||+++.... +-+++..+|||||.|.++.. +.+..+++...+++++|.||||++|+++
T Consensus 568 ~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~---dvP~dY~~iYk~ytR~GsRVLALg~K~l 644 (1160)
T KOG0209|consen 568 KKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLR---DVPKDYDEIYKRYTRQGSRVLALGYKPL 644 (1160)
T ss_pred cccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHH---hCchhHHHHHHHHhhccceEEEEecccc
Confidence 2466778899999999999986531 13578889999999998765 4567788888999999999999999998
Q ss_pred cc--------cccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCC---
Q 002768 416 SE--------MTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPS--- 484 (883)
Q Consensus 416 ~~--------~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~--- 484 (883)
++ ..+++.|++|+|.|++.+.-|+|+|++++|+++++.+.+|+||||||+.||.++|+++||.......
T Consensus 645 ~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~ 724 (1160)
T KOG0209|consen 645 GDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDL 724 (1160)
T ss_pred cccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeecc
Confidence 73 2367889999999999999999999999999999999999999999999999999999996541100
Q ss_pred ------------------------------------CcccCCCCCCC-CcccHHHHHHhcCcEEEeChhhHHHHHHHHhh
Q 002768 485 ------------------------------------SSLLGRDKDEN-EALPVDELIEEADGFAGVFPEHKYEIVKILQE 527 (883)
Q Consensus 485 ------------------------------------~~l~g~~~~~~-~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~ 527 (883)
-.++|..++.+ ....+.+++....||||+.|.||-.++..|++
T Consensus 725 ~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~ 804 (1160)
T KOG0209|consen 725 PEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKK 804 (1160)
T ss_pred CccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHh
Confidence 01122222222 11245667777889999999999999999999
Q ss_pred cCCEEEEEcCCcCCHHhhhhCCeeEEeccc
Q 002768 528 KKHVVGMTGDGVNDAPALKKADIGIAVADA 557 (883)
Q Consensus 528 ~g~~V~m~GDGvNDapALk~AdVGIam~~g 557 (883)
.|+.++|||||.||..|||+||||||+=++
T Consensus 805 ~Gy~TLMCGDGTNDVGALK~AhVGVALL~~ 834 (1160)
T KOG0209|consen 805 LGYVTLMCGDGTNDVGALKQAHVGVALLNN 834 (1160)
T ss_pred cCeEEEEecCCCcchhhhhhcccceehhcC
Confidence 999999999999999999999999998543
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-64 Score=546.81 Aligned_cols=519 Identities=25% Similarity=0.367 Sum_probs=404.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc----CCCCCCChhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccC-CCeeEE
Q 002768 12 FMWNPLSWVMEAAAVMAIVLAN----GGGQGPDWQDFVGIVCL----LLINSTISFIEENNAGNAAAALMAHL-APKTKV 82 (883)
Q Consensus 12 ~~~~~~~~~l~~aail~~~~~~----~~~~~~~~~~~~~i~~~----~li~~~i~~~~e~~a~~~~~~L~~~~-~~~~~V 82 (883)
+.+||..++-++.++++.++.. -++...++.-...|.++ +++...-+.+.|-|.+...++|++.. ..++++
T Consensus 29 ~~kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~ 108 (681)
T COG2216 29 LVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARL 108 (681)
T ss_pred hhhCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Confidence 4578888888888887774321 11111122222222222 33333445555666666667776543 335777
Q ss_pred EEC-CeEEEEEccCcCCCcEEEEeCCCeecccEEEEeeCCeeEeccccccCCccccccccCC---CeeeeeeeEeeCceE
Q 002768 83 LRE-GQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTA---DEVFSGSTCKHGEIE 158 (883)
Q Consensus 83 ~Rd-g~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~g~~l~Vde~es~LTGEs~pv~K~~g---~~v~aGs~v~~G~~~ 158 (883)
+++ |.++.+++.+|+.||+|+++.||+||+||.++||.+ +||| |++||||-||-|.+| +.|-.||.+.+..++
T Consensus 109 l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~a-sVdE--SAITGESaPViresGgD~ssVtGgT~v~SD~l~ 185 (681)
T COG2216 109 LRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVA-SVDE--SAITGESAPVIRESGGDFSSVTGGTRVLSDWLK 185 (681)
T ss_pred hcCCCCeeeccccccccCCEEEEecCCCccCCCeEEeeee-ecch--hhccCCCcceeeccCCCcccccCCcEEeeeeEE
Confidence 776 899999999999999999999999999999999998 9999 999999999999998 679999999999999
Q ss_pred EEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccC--chHHHHHHHHHHHHhhc
Q 002768 159 AVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHR--SYRDGINNLLVLLIGGI 235 (883)
Q Consensus 159 ~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~--~~~~~~~~~l~llv~~i 235 (883)
.++++.-.+|++.|+..+++.+ ++++|-+--++-+..-+ .+++++ ....+|++..+ .-...+...++++++.|
T Consensus 186 irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~L---TliFL~-~~~Tl~p~a~y~~g~~~~i~~LiALlV~LI 261 (681)
T COG2216 186 IRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGL---TLIFLL-AVATLYPFAIYSGGGAASVTVLVALLVCLI 261 (681)
T ss_pred EEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHH---HHHHHH-HHHhhhhHHHHcCCCCcCHHHHHHHHHHHh
Confidence 9999999999999999999988 67777554443321111 111111 11112221110 11234667789999999
Q ss_pred CchhhHHHHHHHHHhHhhhhcceEEecchhhhhhhcCceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHH
Q 002768 236 PIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARA 315 (883)
Q Consensus 236 P~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~ 315 (883)
|-...--++..--.|+.|+.+.|++.++..++|..|.+|++..|||||+|.|+=.-.+.. + ..+.+.+++...|..+
T Consensus 262 PTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~--p-~~gv~~~~la~aa~ls 338 (681)
T COG2216 262 PTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFI--P-VPGVSEEELADAAQLA 338 (681)
T ss_pred cccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhhee--c-CCCCCHHHHHHHHHHh
Confidence 988877777666678999999999999999999999999999999999999875554432 2 2477888877777666
Q ss_pred hccccCChHHHHHHHHhCChH-HHh-hccc-EeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccH-HHHH
Q 002768 316 ARLENQDAIDAAIINMLADPK-EAR-ANIK-EVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKK-EIAV 391 (883)
Q Consensus 316 ~~~~~~~~~~~ai~~~~~~~~-~~~-~~~~-~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~-~~~~ 391 (883)
+-.. +.|-.++++..+.+.. +.+ +... ...++||+.+.+++.+-. ++| ..+-|||.+.+.+..+... ..++
T Consensus 339 Sl~D-eTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~--~~~--~~irKGA~dai~~~v~~~~g~~p~ 413 (681)
T COG2216 339 SLAD-ETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDL--PGG--REIRKGAVDAIRRYVRERGGHIPE 413 (681)
T ss_pred hhcc-CCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccC--CCC--ceeecccHHHHHHHHHhcCCCCCH
Confidence 5443 3466677766553221 111 1111 357899998876665432 233 4567999999998876433 2677
Q ss_pred HHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHH
Q 002768 392 KVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKET 471 (883)
Q Consensus 392 ~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i 471 (883)
.+++..++-++.|-..|+|+.+. +++|.+.+.|-++|+.+|-+++||++||+.+|+||||+.||..|
T Consensus 414 ~l~~~~~~vs~~GGTPL~V~~~~-------------~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~I 480 (681)
T COG2216 414 DLDAAVDEVSRLGGTPLVVVENG-------------RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAI 480 (681)
T ss_pred HHHHHHHHHHhcCCCceEEEECC-------------EEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHH
Confidence 88889999999999999999876 89999999999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 472 GRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 472 a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
|++.|++ +..|+++||+|.++|+.-|.+|+.|+|||||.||||||.+||||
T Consensus 481 A~EAGVD-----------------------------dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg 531 (681)
T COG2216 481 AAEAGVD-----------------------------DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVG 531 (681)
T ss_pred HHHhCch-----------------------------hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchh
Confidence 9999985 34799999999999999999999999999999999999999999
Q ss_pred EEeccccHHHhhcccEeecCCChhHHHHHHHHHHHH
Q 002768 552 IAVADATDAARGAADIVLTEPGLSVIISAVLTSRAI 587 (883)
Q Consensus 552 Iam~~gtd~ak~aADivL~~~~~~~i~~ai~~gR~~ 587 (883)
+||.+||++||||+.+|=+|.|...+.+.++.|++.
T Consensus 532 ~AMNsGTqAAkEAaNMVDLDS~PTKlievV~IGKql 567 (681)
T COG2216 532 VAMNSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQL 567 (681)
T ss_pred hhhccccHHHHHhhcccccCCCccceehHhhhhhhh
Confidence 999999999999999999999999999999999984
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=313.45 Aligned_cols=220 Identities=36% Similarity=0.523 Sum_probs=193.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCe-eEEEECCeEEEEEccCcCCCcEEEEeCCCeecccEEEEe-eCCee
Q 002768 46 GIVCLLLINSTISFIEENNAGNAAAALMAHLAPK-TKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLE-GDPLK 123 (883)
Q Consensus 46 ~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~~~-~~V~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPaD~~ll~-g~~l~ 123 (883)
+++++++++..+++++++|+++.++++++..+++ ++|+|||++++++++||+|||+|.|++||.+||||++++ |+ +.
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~-~~ 79 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGS-AY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSE-EE
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccc-cc
Confidence 3677888899999999999999999999988887 999999999999999999999999999999999999999 65 69
Q ss_pred EeccccccCCcccccccc-----CCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccc-cccChHHHHHHHHHHHH
Q 002768 124 IDQASSALTGESLPVTKK-----TADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST-EVVGHFQQVLTSIGNFC 197 (883)
Q Consensus 124 Vde~es~LTGEs~pv~K~-----~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~-~~~~~~~~~~~~i~~~~ 197 (883)
||| |.+|||+.|+.|. +|+.+|+||.+.+|++.++|++||.+|++|++.+.+... .+++++++.++++..++
T Consensus 80 vd~--s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (230)
T PF00122_consen 80 VDE--SALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKIL 157 (230)
T ss_dssp EEC--HHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHH
T ss_pred ccc--ccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHH
Confidence 999 9999999999999 999999999999999999999999999999999999777 44689999999999887
Q ss_pred HHHHHHHHHHHHHhHhhc--ccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhHhhhhcceEEecchhhhhh
Q 002768 198 ICSIAVGMILEIIVMFPI--QHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEE 269 (883)
Q Consensus 198 ~~~i~i~~~~~~~~~~~~--~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~~~l~k~~ilvk~~~aiE~ 269 (883)
+..++++.++.++ .+.. ...++...+..++++++++||++||+++++++..++++|+++|+++|+++++|+
T Consensus 158 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 158 IIIILAIAILVFI-IWFFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHHHHHHH-HCHTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred Hhcccccchhhhc-cceecccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 6544444443332 3333 566788889999999999999999999999999999999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=244.81 Aligned_cols=211 Identities=31% Similarity=0.442 Sum_probs=150.5
Q ss_pred ceEEEeCCcCccccCceeeeEEEEEeccCCCChHHHHHHHHHHhccccCChHHHHHHHHhCChHHHhhcccEeEeecCCC
Q 002768 273 MDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNP 352 (883)
Q Consensus 273 v~~i~~DKTGTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~l~~~pF~~ 352 (883)
|++||||||||||+|++.+ . . .+...++..+... ...+.||++.++..+....... ... .+|..
T Consensus 1 i~~i~fDktGTLt~~~~~v-~----~----~~~~~~~~~~~~~-~~~s~~p~~~~~~~~~~~~~~~-~~~-----~~~~~ 64 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV-A----P----PSNEAALAIAAAL-EQGSEHPIGKAIVEFAKNHQWS-KSL-----ESFSE 64 (215)
T ss_dssp ESEEEEECCTTTBESHHEE-E----S----CSHHHHHHHHHHH-HCTSTSHHHHHHHHHHHHHHHH-SCC-----EEEEE
T ss_pred CeEEEEecCCCcccCeEEE-E----e----ccHHHHHHHHHHh-hhcCCCcchhhhhhhhhhccch-hhh-----hhhee
Confidence 6899999999999999999 1 1 3445555555433 3345589999988876442211 111 11111
Q ss_pred CCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhccHHHHHHHHHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEee
Q 002768 353 VDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGL 432 (883)
Q Consensus 353 ~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~ 432 (883)
...+...... ++. +. |.++.+.+.+... ............+|.+.+.++.. +.++|.
T Consensus 65 ~~~~~~~~~~--~~~---~~-g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~ 121 (215)
T PF00702_consen 65 FIGRGISGDV--DGI---YL-GSPEWIHELGIRV----ISPDLVEEIQESQGRTVIVLAVN-------------LIFLGL 121 (215)
T ss_dssp ETTTEEEEEE--HCH---EE-HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHCEEEEES-------------HEEEEE
T ss_pred eeeccccccc--ccc---cc-ccchhhhhccccc----cccchhhhHHHhhCCcccceeec-------------CeEEEE
Confidence 1112211111 122 22 8888877654321 11111222234556666666653 489999
Q ss_pred cCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE
Q 002768 433 LPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG 512 (883)
Q Consensus 433 i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar 512 (883)
+.+.||+|+|++++|+.|+++|++++|+|||+..+|.++++++||... .+|++
T Consensus 122 ~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~---------------------------~v~a~ 174 (215)
T PF00702_consen 122 FGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS---------------------------IVFAR 174 (215)
T ss_dssp EEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE---------------------------EEEES
T ss_pred EeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc---------------------------ccccc
Confidence 999999999999999999999999999999999999999999999421 37999
Q ss_pred e--ChhhH--HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCC
Q 002768 513 V--FPEHK--YEIVKILQEKKHVVGMTGDGVNDAPALKKAD 549 (883)
Q Consensus 513 ~--~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad 549 (883)
+ +|++| .++++.||.+++.|+|+|||+||++|+|+||
T Consensus 175 ~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 175 VIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 9 99999 9999999987779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.3e-15 Score=138.57 Aligned_cols=116 Identities=27% Similarity=0.360 Sum_probs=105.1
Q ss_pred eEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhc
Q 002768 428 TFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 428 ~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 507 (883)
...+.++---++=++++++|++|++. ++|++.|||...+....|+-+||+..
T Consensus 20 ~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--------------------------- 71 (152)
T COG4087 20 KVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--------------------------- 71 (152)
T ss_pred eEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee---------------------------
Confidence 56677777778889999999999999 99999999999999999999998743
Q ss_pred CcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe-c--cccHHHhhcccEeecC
Q 002768 508 DGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-A--DATDAARGAADIVLTE 571 (883)
Q Consensus 508 ~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-~--~gtd~ak~aADivL~~ 571 (883)
++||...|+.|.++++.|++++++|.|+|||.||.+||++||+||.. + +..+-+.++||+++-+
T Consensus 72 rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~ 138 (152)
T COG4087 72 RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE 138 (152)
T ss_pred eeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh
Confidence 57999999999999999999999999999999999999999999987 4 4567778999999954
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.1e-09 Score=109.22 Aligned_cols=166 Identities=15% Similarity=0.220 Sum_probs=104.8
Q ss_pred cCCCChHHHHHHHHHhhhhh-cccccCCCCC-----CCC-CCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 002768 606 EYDFPPFMVLIIAILNDGTI-MTISKDRVKP-----SPR-PDSW-KLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFET 677 (883)
Q Consensus 606 ~~~~~~~~il~i~~~~d~~~-~~l~~d~~~~-----~~~-p~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 677 (883)
+.|++|+|++|+|+++|+++ ++++.|+..+ +|| |+.. ..++++...+..|+++++.+++.|++....
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~----- 75 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI----- 75 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS-----
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc-----
Confidence 46899999999999999995 9999887643 232 3332 345677778899999999999888776531
Q ss_pred ccccccCC-CChHHHHHHHHHHHHHHHHHH-HHHHhcCCCcccc----chhHHHHHHHHHHHHHHHHHHHhhc--ccccc
Q 002768 678 HFHVKSLS-SNSEEVSSALYLQVSIISQAL-IFVTRSQSWSFLE----RPGALLMCAFVVAQLVATLIAVYAH--ISFAY 749 (883)
Q Consensus 678 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-i~~~r~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~ 749 (883)
+|..... .......++++|...+.+|+. .+++|+++.+.+. +.|.+++.+++++.++..+ .+|.+ ..+++
T Consensus 76 -~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~-i~~~P~~~~~f~ 153 (182)
T PF00689_consen 76 -FGWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQIL-IVYVPGLNRIFG 153 (182)
T ss_dssp -TCSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHH-HHHSTTHHHHST
T ss_pred -cccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHH-HhcchhhHhhhc
Confidence 1111000 001335778888888888875 7899985543322 1345555555544333322 33322 23456
Q ss_pred cCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 002768 750 ISGVGWGWAGVIWLYSFVFYIPLDVIKFI 778 (883)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~ 778 (883)
+.+.++..|+.+++++++.++..|++|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 78888888899999999999999999974
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.7e-10 Score=113.89 Aligned_cols=131 Identities=17% Similarity=0.134 Sum_probs=96.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
+++|++.+.|+.+++.| ++.++||-....+..+++++|+..- +........ .... ....-..|++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~-~an~l~~~~-~g~~------------tG~~~~~~~~ 132 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTL-LCHKLEIDD-SDRV------------VGYQLRQKDP 132 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchh-hceeeEEec-CCee------------ECeeecCcch
Confidence 57999999999999975 9999999999999999999999632 111000000 0000 0011145789
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTS 584 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~~g 584 (883)
|..+++.+++.|..+.|+|||.||.||++.||+||++.....+.+.+-|+-. -.+.+.+..++.++
T Consensus 133 K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~~~~~~~~~~~-~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 133 KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPA-VHTYEDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCCHHHHHhCCCCCc-ccCHHHHHHHHHHH
Confidence 9999999999888899999999999999999999999755555554444444 45678888887665
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.3e-09 Score=118.19 Aligned_cols=127 Identities=21% Similarity=0.256 Sum_probs=99.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC-----CCCcccCCCCCCCCcccHHHHHHhcCcEEE
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY-----PSSSLLGRDKDENEALPVDELIEEADGFAG 512 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~-----~~~~l~g~~~~~~~~~~~~~~~~~~~vfar 512 (883)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..... ....++|.... + -
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g--------------~---i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG--------------D---I 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC--------------c---c
Confidence 478999999999999999999999999888889999999853110 00111110000 0 0
Q ss_pred eChhhHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 513 VFPEHKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 513 ~~Pe~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
+..+.|.+.++.+.++ | +.|.|+|||.||.+|++.|++|||| ++.+..|+.||.++..+++..+...+-
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2346899998888654 3 5799999999999999999999999 899999999999999999998877653
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.9e-09 Score=110.53 Aligned_cols=129 Identities=23% Similarity=0.278 Sum_probs=94.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE-eChh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG-VFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar-~~Pe 516 (883)
++++++++.++.|++.|+++.++||.....+..+.+.+|+..- +....... + ..... .+.+. ..++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~-~~~~~~~~-~-~~~~~----------~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAA-FANRLEVE-D-GKLTG----------LVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce-EeeEEEEE-C-CEEEE----------EecCcccCCc
Confidence 5899999999999999999999999999999999999998531 11000000 0 00000 00001 1234
Q ss_pred hHHHHHHHHhhcC----CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHH
Q 002768 517 HKYEIVKILQEKK----HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 517 ~K~~iV~~lq~~g----~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~a 580 (883)
.|.++++.+.++. ..+.|+||+.||.+|+++|+++++++ +.+..+++||+++.+++|..+...
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 4777777665543 35889999999999999999999985 568888999999999999887653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=2.9e-08 Score=104.78 Aligned_cols=151 Identities=26% Similarity=0.308 Sum_probs=105.1
Q ss_pred ecCCCCC-CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcc-c---CC-----CCC------
Q 002768 432 LLPLFDP-PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSL-L---GR-----DKD------ 493 (883)
Q Consensus 432 ~i~l~D~-~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~---g~-----~~~------ 493 (883)
.+.-.|. +.+.+.++|+++++.|+++.+.||.....+..+.+.+|+..... ....+ . +. .++
T Consensus 13 TLl~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~ 92 (230)
T PRK01158 13 TITDKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAY 92 (230)
T ss_pred CcCCCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHH
Confidence 3333444 67899999999999999999999999999999999999853211 00000 0 00 000
Q ss_pred ---------------C---------------CCcccHHHHHHhcC---------cEEEeChh--hHHHHHHHHhhc----
Q 002768 494 ---------------E---------------NEALPVDELIEEAD---------GFAGVFPE--HKYEIVKILQEK---- 528 (883)
Q Consensus 494 ---------------~---------------~~~~~~~~~~~~~~---------vfar~~Pe--~K~~iV~~lq~~---- 528 (883)
. .....+.+.+++.. .+....|. .|..-++.+.++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~ 172 (230)
T PRK01158 93 SELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGID 172 (230)
T ss_pred HHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCC
Confidence 0 00011222222221 11234443 388888777653
Q ss_pred CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 529 KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 529 g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
...++++||+.||.+|++.|++|+||+++.+..|++||+|..+++-.++..+++
T Consensus 173 ~~~~i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 173 PEEVAAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHEEEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 246899999999999999999999999999999999999998888888888775
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=3e-08 Score=107.01 Aligned_cols=153 Identities=22% Similarity=0.218 Sum_probs=108.0
Q ss_pred eecCCCCC-CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC---------CCCcc-------------
Q 002768 431 GLLPLFDP-PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY---------PSSSL------------- 487 (883)
Q Consensus 431 G~i~l~D~-~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~---------~~~~l------------- 487 (883)
|.+.-.|. +.+.++++|+++++.|+++.++||.+...+..+.+++|+..... ....+
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 34444444 88999999999999999999999999999999999999964110 00000
Q ss_pred --------------cCC---------------------------CCCCCC----------cccHHHH---HHhc-----C
Q 002768 488 --------------LGR---------------------------DKDENE----------ALPVDEL---IEEA-----D 508 (883)
Q Consensus 488 --------------~g~---------------------------~~~~~~----------~~~~~~~---~~~~-----~ 508 (883)
... +.+..+ ...+.++ +.+. .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 000 000000 0011111 1110 1
Q ss_pred cE-------EEeChh--hHHHHHHHHhh-cCC---EEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChh
Q 002768 509 GF-------AGVFPE--HKYEIVKILQE-KKH---VVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLS 575 (883)
Q Consensus 509 vf-------ar~~Pe--~K~~iV~~lq~-~g~---~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~ 575 (883)
.+ ..+.|. +|..-++.|.+ .|- .|+++||+.||.+||+.|+.||||++|++.+|+.||++...++-.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccch
Confidence 11 333443 78888888876 344 499999999999999999999999999999999999888889999
Q ss_pred HHHHHHHH
Q 002768 576 VIISAVLT 583 (883)
Q Consensus 576 ~i~~ai~~ 583 (883)
++..+++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99888864
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.82 E-value=1.7e-08 Score=105.52 Aligned_cols=143 Identities=24% Similarity=0.295 Sum_probs=99.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcccCC--C------CCC-------------
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLLGR--D------KDE------------- 494 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~--~------~~~------------- 494 (883)
++.+++.++|++|++.|+++.+.||.....+..+++++++..... ....+... . .+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 378899999999999999999999999999999999999863211 00000000 0 000
Q ss_pred --C-------------C---cccHHHHHHhcCc-------EEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCCcCCHH
Q 002768 495 --N-------------E---ALPVDELIEEADG-------FAGVFP--EHKYEIVKILQEK-K---HVVGMTGDGVNDAP 543 (883)
Q Consensus 495 --~-------------~---~~~~~~~~~~~~v-------far~~P--e~K~~iV~~lq~~-g---~~V~m~GDGvNDap 543 (883)
. . ...+.+.+.+... +..++| ..|...++.+.++ | ..++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0 0 0012222222111 123333 4888888888663 2 35899999999999
Q ss_pred hhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHH
Q 002768 544 ALKKADIGIAVADATDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 544 ALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~a 580 (883)
|++.|++|+||++|.+.+|+.||+|..+++-.++.++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhh
Confidence 9999999999999999999999999977666666543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.81 E-value=7.5e-06 Score=93.05 Aligned_cols=168 Identities=23% Similarity=0.270 Sum_probs=114.8
Q ss_pred ceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcc-------------------
Q 002768 427 WTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSL------------------- 487 (883)
Q Consensus 427 l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l------------------- 487 (883)
-.|.|++.+.-++|++....|+.|-++-|+.+-.+-.+....+-.|+++||.+.......+
T Consensus 815 QIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a 894 (1354)
T KOG4383|consen 815 QIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFA 894 (1354)
T ss_pred chhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhh
Confidence 4789999999999999999999999999999999999999999999999996421100000
Q ss_pred ---------------cCCCCCCCC--------------cccHHHHH-------------------Hh-------cCcEEE
Q 002768 488 ---------------LGRDKDENE--------------ALPVDELI-------------------EE-------ADGFAG 512 (883)
Q Consensus 488 ---------------~g~~~~~~~--------------~~~~~~~~-------------------~~-------~~vfar 512 (883)
...+.+.+. +....++. .+ ...|..
T Consensus 895 ~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTD 974 (1354)
T KOG4383|consen 895 AQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTD 974 (1354)
T ss_pred ccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccC
Confidence 000000000 00000111 01 124888
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCCH--HhhhhCCeeEEeccc-------------cHH--Hh-------------
Q 002768 513 VFPEHKYEIVKILQEKKHVVGMTGDGVNDA--PALKKADIGIAVADA-------------TDA--AR------------- 562 (883)
Q Consensus 513 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDa--pALk~AdVGIam~~g-------------td~--ak------------- 562 (883)
++|+.--++++.+|++|++|+.+|.-.|-. --.-+|||+||+..= +.. |+
T Consensus 975 cnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgq 1054 (1354)
T KOG4383|consen 975 CNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQ 1054 (1354)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeeccc
Confidence 999999999999999999999999998843 345789999998521 111 11
Q ss_pred ---hcccEeecCCChhHHHHHHHHHHHHHHHHHHH
Q 002768 563 ---GAADIVLTEPGLSVIISAVLTSRAIFQRMKNY 594 (883)
Q Consensus 563 ---~aADivL~~~~~~~i~~ai~~gR~~~~~i~~~ 594 (883)
-+.|+-+-+..+-.|..+|+-+|....-+|+.
T Consensus 1055 LnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~c 1089 (1354)
T KOG4383|consen 1055 LNALACDFRFDHEELIKIIRLIECARHAMSGFRHC 1089 (1354)
T ss_pred ccccccccchhHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 12333343444556788888888877777764
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.4e-08 Score=101.40 Aligned_cols=100 Identities=21% Similarity=0.266 Sum_probs=80.8
Q ss_pred HHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe--ChhhHHHHH
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV--FPEHKYEIV 522 (883)
Q Consensus 445 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~--~Pe~K~~iV 522 (883)
.+|+.|++.|+++.++|+.+...+..+.+.+|+..- |... .|+--..++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~-----------------------------f~~~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF-----------------------------HEGIKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE-----------------------------EecCCCCHHHHHHHH
Confidence 589999999999999999999999999999998521 1111 234344444
Q ss_pred HHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCC
Q 002768 523 KILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG 573 (883)
Q Consensus 523 ~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~ 573 (883)
+.++-....|+|+||+.||.+|++.|++++||+++.+..++.||+|..+++
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~ 142 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARG 142 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCC
Confidence 444434457999999999999999999999999999999999999986544
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.8e-08 Score=107.64 Aligned_cols=66 Identities=26% Similarity=0.237 Sum_probs=56.5
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
.|..-++.|.+. | ..|+++|||.||.+||+.|++|+||+||.+.+|++||+|..+++-.++..+|+
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 566666666542 2 46999999999999999999999999999999999999998888888888775
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.4e-08 Score=108.35 Aligned_cols=145 Identities=15% Similarity=0.176 Sum_probs=99.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCccc---CC-----CC---------------
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLL---GR-----DK--------------- 492 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~---g~-----~~--------------- 492 (883)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ....+. +. .+
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 488999999999999999999999999999999999999853200 000000 00 00
Q ss_pred -------------------------------------CCC------------CcccHHH---HHHhc-----C------c
Q 002768 493 -------------------------------------DEN------------EALPVDE---LIEEA-----D------G 509 (883)
Q Consensus 493 -------------------------------------~~~------------~~~~~~~---~~~~~-----~------v 509 (883)
+.. +...+.+ .+.+. . -
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 000 0000011 11110 0 0
Q ss_pred EEEeChh--hHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccE--eecCCChhHHHHHH
Q 002768 510 FAGVFPE--HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADI--VLTEPGLSVIISAV 581 (883)
Q Consensus 510 far~~Pe--~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADi--vL~~~~~~~i~~ai 581 (883)
+..++|. .|..-++.|.+. | ..|+++|||.||.+||+.|+.||||+||.+.+|++||. |..+++-.++..+|
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l 258 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYL 258 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeecCCCcchHHHHHH
Confidence 2233443 577777777653 2 46999999999999999999999999999999999996 66677777877777
Q ss_pred H
Q 002768 582 L 582 (883)
Q Consensus 582 ~ 582 (883)
+
T Consensus 259 ~ 259 (272)
T PRK15126 259 T 259 (272)
T ss_pred H
Confidence 4
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.77 E-value=3.2e-08 Score=97.83 Aligned_cols=105 Identities=28% Similarity=0.384 Sum_probs=82.9
Q ss_pred HHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHH
Q 002768 446 TIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKIL 525 (883)
Q Consensus 446 ~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~l 525 (883)
+|++|++.|+++.++||+....+..+.+++|+..- |... ..|.+.++.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~-----------------------------~~~~--~~k~~~~~~~ 84 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL-----------------------------YQGQ--SNKLIAFSDI 84 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE-----------------------------Eecc--cchHHHHHHH
Confidence 99999999999999999999999999999998521 1111 2344444444
Q ss_pred hh----cCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCC----hhHHHHHH
Q 002768 526 QE----KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG----LSVIISAV 581 (883)
Q Consensus 526 q~----~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~----~~~i~~ai 581 (883)
.+ ....|.|+||+.||.+|++.|+++++|.++.+..+..||+++..+. |..+.+.+
T Consensus 85 ~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 85 LEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHHH
Confidence 32 3467999999999999999999999999999999999999998664 54444444
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.75 E-value=7.3e-08 Score=101.28 Aligned_cols=144 Identities=24% Similarity=0.285 Sum_probs=99.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcc-c-C-------CCCC-------------
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSL-L-G-------RDKD------------- 493 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l-~-g-------~~~~------------- 493 (883)
.+.+.+.++|+++++.|+++.+.||.+...+..+.+++|+..... ....+ . + ...+
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 377889999999999999999999999999999999999643210 00000 0 0 0000
Q ss_pred -----------C--C-------CcccHHHHHHhcC---------cEEEeCh--hhHHHHHHHHhhc-C---CEEEEEcCC
Q 002768 494 -----------E--N-------EALPVDELIEEAD---------GFAGVFP--EHKYEIVKILQEK-K---HVVGMTGDG 538 (883)
Q Consensus 494 -----------~--~-------~~~~~~~~~~~~~---------vfar~~P--e~K~~iV~~lq~~-g---~~V~m~GDG 538 (883)
. . +.+...+++++.. .+..+.| .+|..-++.+.++ | ..|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 0 0001122222211 1223344 3788888887653 3 568999999
Q ss_pred cCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhH----HHHHH
Q 002768 539 VNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSV----IISAV 581 (883)
Q Consensus 539 vNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~----i~~ai 581 (883)
.||.+|++.|++|+||+|+.+..|+.||.|..+++-.+ +..++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l 221 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEIL 221 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999987777776 55544
|
catalyze the same reaction as SPP. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.6e-08 Score=105.02 Aligned_cols=66 Identities=20% Similarity=0.177 Sum_probs=54.7
Q ss_pred hHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhccc--EeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD--IVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aAD--ivL~~~~~~~i~~ai~ 582 (883)
.|..-++.+.+. | ..|+++|||.||.+||+.|+.|+||+||.+.+|++|| .|..+++-.++..+++
T Consensus 190 sKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 190 SKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 466666666542 2 4699999999999999999999999999999999988 6777777778877775
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=98.72 E-value=2.1e-08 Score=89.69 Aligned_cols=66 Identities=32% Similarity=0.487 Sum_probs=54.0
Q ss_pred ccCChHHHHHHHHhCC------hHHHhhcccEeEeecCCCCCceEEEEEEcCCCcEEEEEcCcHHHHHhhhhc
Q 002768 319 ENQDAIDAAIINMLAD------PKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKE 385 (883)
Q Consensus 319 ~~~~~~~~ai~~~~~~------~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~ 385 (883)
..+||.|.|++.++.. ....+..++.++.+||||++|||+++++ .++.+++++|||||.|+++|+.
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 3467899998887532 3456788999999999999999999998 3345677999999999999974
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-07 Score=98.96 Aligned_cols=114 Identities=22% Similarity=0.221 Sum_probs=86.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCC-----CcccCCCCCCCCcccHHHHHHhcCcEE
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPS-----SSLLGRDKDENEALPVDELIEEADGFA 511 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-----~~l~g~~~~~~~~~~~~~~~~~~~vfa 511 (883)
.+++|++.+.++.++++|.+|+++||-...-+..+|+++|+....-.. ..++| .+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG------------------~v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG------------------RVVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec------------------eeee
Confidence 679999999999999999999999999999999999999996432100 11222 1333
Q ss_pred Ee-ChhhHHHHHHHHhh-cCC---EEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEee
Q 002768 512 GV-FPEHKYEIVKILQE-KKH---VVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVL 569 (883)
Q Consensus 512 r~-~Pe~K~~iV~~lq~-~g~---~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL 569 (883)
.. ..+.|.+.++.+.+ .|. .+.++|||.||.|||+.|+.+|++..... .+..|+...
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~~-l~~~a~~~~ 199 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPK-LRALADVRI 199 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCHH-HHHHHHHhc
Confidence 33 34789998877665 354 48899999999999999999999974333 333555444
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.6e-07 Score=101.74 Aligned_cols=66 Identities=27% Similarity=0.360 Sum_probs=55.6
Q ss_pred hHHHHHHHHhh-cC---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQE-KK---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~-~g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
.|..-++.+.+ .| ..|+++||+.||.+|++.|++|+||+++.+..|+.||+|..+++-.++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 46666665543 23 46899999999999999999999999999999999999998888888888875
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.63 E-value=2.2e-07 Score=109.69 Aligned_cols=52 Identities=23% Similarity=0.408 Sum_probs=48.8
Q ss_pred EEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHHHH
Q 002768 531 VVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 531 ~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~ai~ 582 (883)
.|+++|||.||.+||+.|+.||||+||.+..|++||+|..+++-.++..+|+
T Consensus 525 eviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 525 EIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 5899999999999999999999999999999999999998888888888875
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.7e-07 Score=99.45 Aligned_cols=145 Identities=17% Similarity=0.225 Sum_probs=100.6
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcccCCC--------C--------------
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLLGRD--------K-------------- 492 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g~~--------~-------------- 492 (883)
..+.+++.+++++++++|+++.+.||.....+..+.+++++..... ....+...+ +
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhhh
Confidence 4477999999999999999999999999999999999999862110 000000000 0
Q ss_pred ----------------CCC------------------------------------CcccHH-------HHHHhc------
Q 002768 493 ----------------DEN------------------------------------EALPVD-------ELIEEA------ 507 (883)
Q Consensus 493 ----------------~~~------------------------------------~~~~~~-------~~~~~~------ 507 (883)
+.. +.+.+. +.....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 173 (254)
T PF08282_consen 94 HNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVRS 173 (254)
T ss_dssp TTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred cccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEEe
Confidence 000 000011 111110
Q ss_pred -CcEEEeCh--hhHHHHHHHHhh----cCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHH
Q 002768 508 -DGFAGVFP--EHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 508 -~vfar~~P--e~K~~iV~~lq~----~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~a 580 (883)
..+-.++| ..|..-++.|.+ ....++++||+.||.+||+.|+.|+||+++++..|+.||.+....+=.++.++
T Consensus 174 ~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~ 253 (254)
T PF08282_consen 174 SPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAKA 253 (254)
T ss_dssp ETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHHH
T ss_pred cccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHHh
Confidence 12334444 479888888875 23578999999999999999999999999999999999999987766777765
Q ss_pred H
Q 002768 581 V 581 (883)
Q Consensus 581 i 581 (883)
|
T Consensus 254 i 254 (254)
T PF08282_consen 254 I 254 (254)
T ss_dssp H
T ss_pred C
Confidence 4
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.7e-07 Score=95.48 Aligned_cols=127 Identities=21% Similarity=0.233 Sum_probs=91.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++++.++.|+++ +++.++|+-....+..+.+++|+..- +........+ .... .+.-..|+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~-f~~~~~~~~~-~~i~------------~~~~~~p~~ 132 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTL-FCHSLEVDED-GMIT------------GYDLRQPDG 132 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchh-hcceEEECCC-CeEE------------Cccccccch
Confidence 4689999999999999 99999999999999999999998521 1110000000 0000 000123788
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccE-eecCCChhHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADI-VLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADi-vL~~~~~~~i~~ai 581 (883)
|...++.++..+..+.|+|||.||.+|.++|++|+..+...+.....++. ++ +++..+...+
T Consensus 133 k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 133 KRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred HHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 99999999988999999999999999999999999987544444455665 43 4566665544
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.4e-07 Score=94.38 Aligned_cols=110 Identities=26% Similarity=0.317 Sum_probs=84.7
Q ss_pred HHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHH
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKI 524 (883)
Q Consensus 445 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 524 (883)
.+|+.|++.|+++.++||.....+..+++++|+..- |. ..++|...++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~-----------------------------f~--g~~~k~~~l~~ 103 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL-----------------------------YQ--GQSNKLIAFSD 103 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-----------------------------ec--CCCcHHHHHHH
Confidence 699999999999999999999999999999998521 11 12345555555
Q ss_pred Hhh-c---CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCC----hhHHHHHHHHHH
Q 002768 525 LQE-K---KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG----LSVIISAVLTSR 585 (883)
Q Consensus 525 lq~-~---g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~----~~~i~~ai~~gR 585 (883)
+.+ . ...|+|+||+.||.+|++.|+++++++++.+..+..||+++-.++ +..+.+.+...|
T Consensus 104 ~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~ 172 (183)
T PRK09484 104 LLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQ 172 (183)
T ss_pred HHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhc
Confidence 433 3 356999999999999999999999999888888999999995432 444555554433
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.52 E-value=4e-07 Score=93.74 Aligned_cols=117 Identities=25% Similarity=0.335 Sum_probs=84.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+|+.. .+....... +..... -+.+-...|..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~-~~~~~~~~~-~~g~~~----------p~~~~~~~~~~ 147 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDY-VYSNELVFD-EKGFIQ----------PDGIVRVTFDN 147 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCe-EEEEEEEEc-CCCeEe----------cceeeEEcccc
Confidence 589999999999999999999999999999999999999742 111111110 000000 01122345677
Q ss_pred HHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhccc
Q 002768 518 KYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566 (883)
Q Consensus 518 K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aAD 566 (883)
|.++++.+.++ .+.+.|+||+.||.+|++.|+++++++.+....+.|+|
T Consensus 148 k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 148 KGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 88887776553 34589999999999999999999999865555666666
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.1e-07 Score=97.73 Aligned_cols=64 Identities=28% Similarity=0.306 Sum_probs=55.0
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCChhHHHHH
Q 002768 517 HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 517 ~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~~~~i~~a 580 (883)
+|..-++.+.+. ...++++||+.||.+|++.|+.|+||+++.+..|+.||+++.+++-.++..+
T Consensus 188 ~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 188 SKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 588888887663 2469999999999999999999999999999999999999988776666554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-06 Score=92.90 Aligned_cols=144 Identities=19% Similarity=0.184 Sum_probs=94.4
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC--CCCcccC-CCC----------CCCCcccHH----
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLLG-RDK----------DENEALPVD---- 501 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~--~~~~l~g-~~~----------~~~~~~~~~---- 501 (883)
.-+.+.++|++|++.|+++.++||.....+..+.+++|+..... ....+.. ... ..++.+.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 44569999999999999999999999999999999999853211 0100100 000 000000000
Q ss_pred -------------------------------------------------------HHHHhcCc-------EEEeCh--hh
Q 002768 502 -------------------------------------------------------ELIEEADG-------FAGVFP--EH 517 (883)
Q Consensus 502 -------------------------------------------------------~~~~~~~v-------far~~P--e~ 517 (883)
+.+.+..+ +-.+.| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 01111111 111222 25
Q ss_pred HHHHHHHHhhc------CCEEEEEcCCcCCHHhhhhCCeeEEecccc---HHHhhc--c-cEeecCCChhHHHHHHH
Q 002768 518 KYEIVKILQEK------KHVVGMTGDGVNDAPALKKADIGIAVADAT---DAARGA--A-DIVLTEPGLSVIISAVL 582 (883)
Q Consensus 518 K~~iV~~lq~~------g~~V~m~GDGvNDapALk~AdVGIam~~gt---d~ak~a--A-DivL~~~~~~~i~~ai~ 582 (883)
|..-++.+.+. ...|.++||+.||.+||+.|+.||||+|+. +..|+. | |+|..+++-.++..+++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 66666655442 456999999999999999999999999987 468876 4 58887888888888775
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.43 E-value=6.6e-05 Score=87.35 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=75.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
|++|++.+.++++++.|+++.++|+-+...+..+++.+|+.+. ++.+++ ..+..|+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~------------------~~~~kg~~ 128 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDG------------------TTNLKGAA 128 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCC------------------ccccCCch
Confidence 5789999999999999999999999999999999999998321 111111 12455777
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHh
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAAR 562 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak 562 (883)
|.+.++.....+ -+.++||..||.|+++.|+-.++++.+....+
T Consensus 129 K~~~l~~~l~~~-~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l~~ 172 (479)
T PRK08238 129 KAAALVEAFGER-GFDYAGNSAADLPVWAAARRAIVVGASPGVAR 172 (479)
T ss_pred HHHHHHHHhCcc-CeeEecCCHHHHHHHHhCCCeEEECCCHHHHH
Confidence 866554332222 25789999999999999999999985544433
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.38 E-value=9e-07 Score=84.45 Aligned_cols=114 Identities=25% Similarity=0.387 Sum_probs=90.4
Q ss_pred HHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHH
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKI 524 (883)
Q Consensus 445 ~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~ 524 (883)
-.|+.+.++||+|-+|||.+...++.-|+.+||..- | .--++|....+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~-----------------------------~--qG~~dK~~a~~~ 90 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHL-----------------------------Y--QGISDKLAAFEE 90 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCcee-----------------------------e--echHhHHHHHHH
Confidence 368999999999999999999999999999999521 1 114677777766
Q ss_pred Hhhc----CCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhcccEeecCCC----hhHHHHHHHHHHHHHH
Q 002768 525 LQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG----LSVIISAVLTSRAIFQ 589 (883)
Q Consensus 525 lq~~----g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aADivL~~~~----~~~i~~ai~~gR~~~~ 589 (883)
|.++ -..|+++||-.||-|+|++.++++|+.++.+-.++.||+|+...+ +..+.+.|...+..++
T Consensus 91 L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 91 LLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 6553 356999999999999999999999999999999999999997654 4444555555544443
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.6e-06 Score=88.99 Aligned_cols=136 Identities=13% Similarity=0.044 Sum_probs=88.5
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCC-cccCCCCCCCCcccHHHHHHhcCcE--EEe
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS-SLLGRDKDENEALPVDELIEEADGF--AGV 513 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-~l~g~~~~~~~~~~~~~~~~~~~vf--ar~ 513 (883)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.....+... ...+......... ...+ ..-
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~p~--------~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDWPH--------PCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeCCC--------CCccccccC
Confidence 4799999999999999999999999999999998888875432221111 1111111000000 0000 001
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHHh--hcccEeecCCChhHHHHHHH
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAAR--GAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak--~aADivL~~~~~~~i~~ai~ 582 (883)
....|..+++.++..+..|.|+|||.||.+|++.||+++|=+.-.+-.+ ..+.+.+ ++|..+...++
T Consensus 141 cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 CGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARDYLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred CCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehHHHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1347999999998888889999999999999999999887652112111 1232222 56777766664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.34 E-value=6.8e-07 Score=91.23 Aligned_cols=92 Identities=25% Similarity=0.326 Sum_probs=71.0
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh-h--
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE-H-- 517 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe-~-- 517 (883)
+++++.|+.++++|++++++||+....++.+++.+|++.... .+.+..... .....++.+|. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v-----~~~~~~~~~---------~~~~~~~~~~~~~~~ 157 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNV-----IGNELFDNG---------GGIFTGRITGSNCGG 157 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGE-----EEEEEECTT---------CCEEEEEEEEEEESH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEE-----EEEeeeecc---------cceeeeeECCCCCCc
Confidence 888899999999999999999999999999999999974211 111110000 11235666666 4
Q ss_pred HHHHHHHH------hhcCCEEEEEcCCcCCHHhhh
Q 002768 518 KYEIVKIL------QEKKHVVGMTGDGVNDAPALK 546 (883)
Q Consensus 518 K~~iV~~l------q~~g~~V~m~GDGvNDapALk 546 (883)
|.+.++.+ +.....+.++|||.||.||||
T Consensus 158 K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 158 KAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999996
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.31 E-value=6.2e-06 Score=89.44 Aligned_cols=66 Identities=21% Similarity=0.156 Sum_probs=51.5
Q ss_pred hHHHHHHHHhh-------cCCEEEEEcCCcCCHHhhhhCCeeEEecccc-HH-----HhhcccEeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQE-------KKHVVGMTGDGVNDAPALKKADIGIAVADAT-DA-----ARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~-------~g~~V~m~GDGvNDapALk~AdVGIam~~gt-d~-----ak~aADivL~~~~~~~i~~ai~ 582 (883)
+|..-++.|.+ ....|+++|||.||.+||+.|++||||+++. +. .+..+|++....+-.++.++++
T Consensus 187 sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 187 GKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLD 265 (271)
T ss_pred CHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHH
Confidence 56666665544 2356999999999999999999999999554 21 3447999998888888888876
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.4e-06 Score=90.05 Aligned_cols=66 Identities=29% Similarity=0.359 Sum_probs=52.0
Q ss_pred hHHHHHHHHhh----cC-CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHh----hcc-cEee--cCCChhHHHHHHH
Q 002768 517 HKYEIVKILQE----KK-HVVGMTGDGVNDAPALKKADIGIAVADATDAAR----GAA-DIVL--TEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~----~g-~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak----~aA-DivL--~~~~~~~i~~ai~ 582 (883)
.|..-++.+.+ .. ..|+++||+.||.+|++.|++|+||+||.+..| .+| +.+. ..++=.++..+++
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 56665655543 34 789999999999999999999999999999999 666 6777 4555667777764
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.28 E-value=6.6e-06 Score=86.41 Aligned_cols=124 Identities=21% Similarity=0.286 Sum_probs=84.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC-CCCCCC-------cccCCCCCCCCcccHHHHHHhcCc
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT-NMYPSS-------SLLGRDKDENEALPVDELIEEADG 509 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~-------~l~g~~~~~~~~~~~~~~~~~~~v 509 (883)
+++|++.+.++.|++.|+++.++||.....+..+.+.+|+.. +.+... .+.|.+.. ..
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~--------------~~ 149 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDEN--------------EP 149 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCC--------------Cc
Confidence 378999999999999999999999999999999999999963 221110 01110000 00
Q ss_pred EEEeChhhHHHHHHHHhhc--CCEEEEEcCCcCCHHhhhh--CCeeEEeccc--cHHHhhcccEeecCCChhHHHH
Q 002768 510 FAGVFPEHKYEIVKILQEK--KHVVGMTGDGVNDAPALKK--ADIGIAVADA--TDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 510 far~~Pe~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~--AdVGIam~~g--td~ak~aADivL~~~~~~~i~~ 579 (883)
...+..|.+.++.+.++ ...+.|+||+.||..|.++ ++++++.+.. .+.....+|+++ +++..+..
T Consensus 150 --~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~el~~ 221 (224)
T PLN02954 150 --TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFV--TDFQDLIE 221 (224)
T ss_pred --ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEE--CCHHHHHH
Confidence 01124477777777654 3568899999999999877 5666666532 233445689988 45565544
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.8e-06 Score=84.96 Aligned_cols=108 Identities=21% Similarity=0.285 Sum_probs=75.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCC-CCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATN-MYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
+-|++++.+..|++.|.+|.++||--...+..+|.++||+.. .+....+.+.+-+-.. ++.. =.-+...-
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g---fd~~------~ptsdsgg 159 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG---FDTN------EPTSDSGG 159 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc---cccC------CccccCCc
Confidence 458999999999999999999999999999999999999752 2211111111000000 0000 00011347
Q ss_pred HHHHHHHHhhc--CCEEEEEcCCcCCHHhhhhCCeeEEec
Q 002768 518 KYEIVKILQEK--KHVVGMTGDGVNDAPALKKADIGIAVA 555 (883)
Q Consensus 518 K~~iV~~lq~~--g~~V~m~GDGvNDapALk~AdVGIam~ 555 (883)
|.+++..++++ -..++|+|||.||.+|+.-||-=|+.+
T Consensus 160 Ka~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 160 KAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 99999999883 457899999999999999977666654
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.13 E-value=9.9e-06 Score=82.30 Aligned_cols=114 Identities=15% Similarity=0.068 Sum_probs=76.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE-eCh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG-VFP 515 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar-~~P 515 (883)
-++++++.+.++.|++.|+++.++|+.+......+.+..|+.... ..++ +.+....++..+.-...++.++.. ...
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~i~-~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVF--IEIY-SNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhe--eEEe-ccCceECCCCcEEEecCCCCccCcCCCC
Confidence 378999999999999999999999999999999999999985321 1111 111100000000000000000010 112
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 516 EHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 516 e~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
..|.++++.++++ ...+.|+|||.||..|.++||+-.|
T Consensus 148 ~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 148 CCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 3599999999887 8899999999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.8e-06 Score=83.87 Aligned_cols=93 Identities=25% Similarity=0.298 Sum_probs=70.2
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCC-------cccCCCCCCCCcccHHHHHHhcCcEE
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS-------SLLGRDKDENEALPVDELIEEADGFA 511 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-------~l~g~~~~~~~~~~~~~~~~~~~vfa 511 (883)
+++++.+.++.+++.|+++.++||.....+..+++.+|+.. .+... .++|... .-.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~-~~~~~~~~~~~g~~~g~~~----------------~~~ 136 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD-VFANRLEFDDNGLLTGPIE----------------GQV 136 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch-heeeeEEECCCCEEeCccC----------------Ccc
Confidence 68999999999999999999999999999999999999852 11110 1111000 001
Q ss_pred EeChhhHHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhC
Q 002768 512 GVFPEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKA 548 (883)
Q Consensus 512 r~~Pe~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~A 548 (883)
...++.|.+.++.++++ ...+.++|||.||.||++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 24468899999987664 34689999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.4e-05 Score=83.84 Aligned_cols=133 Identities=13% Similarity=0.054 Sum_probs=85.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCC--CCcccCCCCCCCCcccHHHHHHhcCc--EEEe
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYP--SSSLLGRDKDENEALPVDELIEEADG--FAGV 513 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~--~~~l~g~~~~~~~~~~~~~~~~~~~v--far~ 513 (883)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +....+- .....|.........+ .. +...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p--------~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHP--------CDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCC--------cccccccc
Confidence 68999999999999999999999999999999999888 6432110 0011111110000000 00 0000
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEeccccHHH--hhcccEeecCCChhHHHHHH
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAA--RGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~~gtd~a--k~aADivL~~~~~~~i~~ai 581 (883)
....|.++++.++.....|.|+|||.||.+|.++||+.++-+.-.+.+ +..+.+.+ ++|..+...+
T Consensus 145 ~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~~~l~~~~~~~~~~~~~~--~~f~ei~~~l 212 (219)
T PRK09552 145 CGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFARDFLITKCEELGIPYTPF--ETFHDVQTEL 212 (219)
T ss_pred CCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeHHHHHHHHHHcCCCcccc--CCHHHHHHHH
Confidence 013488899998887778999999999999999999977733111222 22244333 5677766665
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.3e-05 Score=82.74 Aligned_cols=102 Identities=18% Similarity=0.148 Sum_probs=77.3
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCC-------cccCCCCCCCCcccHHHHHHhcC
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS-------SLLGRDKDENEALPVDELIEEAD 508 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~-------~l~g~~~~~~~~~~~~~~~~~~~ 508 (883)
..++++++.+.++.+++.|+++.++||-....+..+++++|+..- .... .++|....
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~-~~~~l~~~~~g~~~g~~~~--------------- 148 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA-IGTRLEESEDGIYTGNIDG--------------- 148 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce-EecceEEcCCCEEeCCccC---------------
Confidence 346899999999999999999999999999999999999998531 1111 11111000
Q ss_pred cEEEeChhhHHHHHHHHhh-cC---CEEEEEcCCcCCHHhhhhCCeeEEec
Q 002768 509 GFAGVFPEHKYEIVKILQE-KK---HVVGMTGDGVNDAPALKKADIGIAVA 555 (883)
Q Consensus 509 vfar~~Pe~K~~iV~~lq~-~g---~~V~m~GDGvNDapALk~AdVGIam~ 555 (883)
-.+.++.|.+.++.+.+ .+ ..+.++||+.||.||++.|+.++++.
T Consensus 149 --~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 149 --NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred --CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 12346788888877654 33 26889999999999999999999986
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=3.9e-05 Score=80.51 Aligned_cols=126 Identities=16% Similarity=0.153 Sum_probs=90.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC--
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF-- 514 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~-- 514 (883)
.++.||+.+.++.|++.|+++.++||........+.+++|+.... ..++.+.+ +.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~------------------~~~~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYF--SVVIGGDS------------------LPNKKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCc--cEEEcCCC------------------CCCCCcC
Confidence 458899999999999999999999999999999999999985321 11111111 11112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEecc----ccHHHhhcccEeecCCChhHHHHHHHHH
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAD----ATDAARGAADIVLTEPGLSVIISAVLTS 584 (883)
Q Consensus 515 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam~~----gtd~ak~aADivL~~~~~~~i~~ai~~g 584 (883)
|+--..+.+.++.....+.|+||+.||..|.++|++ +|.+.. ..+.....+|+++ +++..+...+.++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 332344555555556779999999999999999999 666643 2344455788888 7788888877653
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.83 E-value=3.8e-05 Score=72.75 Aligned_cols=118 Identities=15% Similarity=0.065 Sum_probs=77.0
Q ss_pred CCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 434 PLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 434 ~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
.-..++++++++.+++|++.|++++++||.....+....+++|+... ...++......................+.+-
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDY--FDPVITSNGAAIYYPKEGLFLGGGPFDIGKP 97 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchh--hhheeccchhhhhcccccccccccccccCCC
Confidence 44568999999999999999999999999999999999999997321 1111110000000000000000011123355
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhh-CCeeEE
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK-ADIGIA 553 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~-AdVGIa 553 (883)
.|+.+..+.+.+....+.+.++||+.||.+|++. ..-+|+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 98 NPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 5666677777776666789999999999999998 554544
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.00013 Score=76.61 Aligned_cols=125 Identities=19% Similarity=0.206 Sum_probs=93.0
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccC-CCCCCCCcccHHHHHHhcCcEEEeC
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLG-RDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
..++-|+++++++.|+++|++..++|++....+..+.+..|+..-. ..+.| .... ...-.
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F---~~i~g~~~~~----------------~~KP~ 147 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYF---DVIVGGDDVP----------------PPKPD 147 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCcccc---ceEEcCCCCC----------------CCCcC
Confidence 4567899999999999999999999999999999999999996421 11111 1110 11224
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCC---eeEEecc--ccHHHhhcccEeecCCChhHHHHHH
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD---IGIAVAD--ATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 515 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad---VGIam~~--gtd~ak~aADivL~~~~~~~i~~ai 581 (883)
|+......+.+....+.+.||||..||..|=|+|+ ||+..|. +.......+|.++ ++++.+...+
T Consensus 148 P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l 217 (220)
T COG0546 148 PEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALL 217 (220)
T ss_pred HHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHH
Confidence 66666777776655457999999999999999998 6666663 4566777799999 5666666554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00013 Score=75.60 Aligned_cols=124 Identities=16% Similarity=0.162 Sum_probs=84.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+|+.+++++|++.|+++.++||.....+...-+.+|+..- . ..++...+. ...+-.|+-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~-f-~~i~~~~~~----------------~~~KP~~~~ 136 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPL-F-DHVIGSDEV----------------PRPKPAPDI 136 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhh-e-eeEEecCcC----------------CCCCCChHH
Confidence 6789999999999999999999999999989888899998531 0 111111100 011222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE-e--c--cccHHHhhcccEeecCCChhHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-V--A--DATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-m--~--~gtd~ak~aADivL~~~~~~~i~~ai 581 (883)
=.++.+.++-....+.|+||+.+|..+-++|++... + | +..+..+..+|+++ +++..+...+
T Consensus 137 ~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 137 VREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred HHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 344444454455679999999999999999998643 3 2 22344567899988 5566665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.0002 Score=76.70 Aligned_cols=146 Identities=18% Similarity=0.155 Sum_probs=96.3
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----CCCcc-cCC-C-------------------
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY----PSSSL-LGR-D------------------- 491 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----~~~~l-~g~-~------------------- 491 (883)
.+..|...++++++++.|+.++.+||......+.+.+++++..+.+ ....+ .+. .
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567899999999999999999999999999999999999754310 00000 000 0
Q ss_pred ------CCCC-----------------Cccc----H---HHHHHhc--Cc--------EEEeCh--hhHHHHHHHHhhc-
Q 002768 492 ------KDEN-----------------EALP----V---DELIEEA--DG--------FAGVFP--EHKYEIVKILQEK- 528 (883)
Q Consensus 492 ------~~~~-----------------~~~~----~---~~~~~~~--~v--------far~~P--e~K~~iV~~lq~~- 528 (883)
.... .... + .+.+.+. ++ +-.+.| ..|..-++.+.++
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 0000 0000 1 1122211 11 113344 4788888888663
Q ss_pred ---CCEEEEEcCCcCCHHhhhh-CCeeEEeccccHHHhhccc-------EeecCCChhHHHHHHH
Q 002768 529 ---KHVVGMTGDGVNDAPALKK-ADIGIAVADATDAARGAAD-------IVLTEPGLSVIISAVL 582 (883)
Q Consensus 529 ---g~~V~m~GDGvNDapALk~-AdVGIam~~gtd~ak~aAD-------ivL~~~~~~~i~~ai~ 582 (883)
...|+++||+.||.+|++. ++.|++|+++.+..++.+| ++.....-+++.++++
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3578999999999999998 7799999999998886543 5444445566666664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00029 Score=74.26 Aligned_cols=43 Identities=12% Similarity=0.131 Sum_probs=38.6
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
.+..-+++.++|++|++.|++++++||.....+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 4455567999999999999999999999999999999999984
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00039 Score=79.74 Aligned_cols=141 Identities=20% Similarity=0.182 Sum_probs=90.0
Q ss_pred cHHHHH-HHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----C-CCcccCCC------------------------
Q 002768 442 DSVDTI-RRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY----P-SSSLLGRD------------------------ 491 (883)
Q Consensus 442 ~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----~-~~~l~g~~------------------------ 491 (883)
...+++ +++++.|+..+..||.++...+.+.++.++..+.+ . ..+..+..
T Consensus 32 ~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~ 111 (413)
T PLN02382 32 LRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEET 111 (413)
T ss_pred HHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHH
Confidence 345556 88999999999999999999999999998865421 0 00000000
Q ss_pred --C---------CC-C-------Cccc-------HHHHHHhc--C--------cEEEeChh--hHHHHHHHHhhc----C
Q 002768 492 --K---------DE-N-------EALP-------VDELIEEA--D--------GFAGVFPE--HKYEIVKILQEK----K 529 (883)
Q Consensus 492 --~---------~~-~-------~~~~-------~~~~~~~~--~--------vfar~~Pe--~K~~iV~~lq~~----g 529 (883)
. +. . +... +.+.+.+. + -+-.+.|. .|..-++.|.++ |
T Consensus 112 ~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~g 191 (413)
T PLN02382 112 SKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEG 191 (413)
T ss_pred hcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcC
Confidence 0 00 0 0001 11111110 1 13345554 599888888764 2
Q ss_pred ---CEEEEEcCCcCCHHhhhhCC-eeEEeccccHHHhhcc--------cEeec-CCChhHHHHHHH
Q 002768 530 ---HVVGMTGDGVNDAPALKKAD-IGIAVADATDAARGAA--------DIVLT-EPGLSVIISAVL 582 (883)
Q Consensus 530 ---~~V~m~GDGvNDapALk~Ad-VGIam~~gtd~ak~aA--------DivL~-~~~~~~i~~ai~ 582 (883)
..|.++||+.||.+||+.|+ .||||+|+.+..|+.+ |++.. +++-.+|.++++
T Consensus 192 i~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 192 KAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred CChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 47899999999999999999 6999999999888743 55544 334455555553
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00015 Score=77.00 Aligned_cols=67 Identities=18% Similarity=0.250 Sum_probs=56.5
Q ss_pred hhHHHHHHHHhhc-C---CEEEEEcCCcCCHHhhhhCCeeEEeccccHHHhhccc----EeecCCChhHHHHHHH
Q 002768 516 EHKYEIVKILQEK-K---HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD----IVLTEPGLSVIISAVL 582 (883)
Q Consensus 516 e~K~~iV~~lq~~-g---~~V~m~GDGvNDapALk~AdVGIam~~gtd~ak~aAD----ivL~~~~~~~i~~ai~ 582 (883)
..|...++.+.++ | ..|+++||+.||.+|++.|+.||+|+++.+..|+.|| +|...++=.++.++|+
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~ 232 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGIN 232 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHH
Confidence 3788888888663 3 3588999999999999999999999999999999999 7776666677777775
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00056 Score=74.23 Aligned_cols=124 Identities=15% Similarity=0.127 Sum_probs=80.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
.++.|++.++++.|++.|+++.++||-....+..+.++.|+.... ..+..+.+.. ...-.|+
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f--~~i~~~d~~~----------------~~Kp~p~ 161 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF--RWIIGGDTLP----------------QKKPDPA 161 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC--eEEEecCCCC----------------CCCCCcH
Confidence 468899999999999999999999999998888888888885311 1111111100 0011111
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEeccc----cHHHhhcccEeecCCChhHHHHH
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADA----TDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam~~g----td~ak~aADivL~~~~~~~i~~a 580 (883)
-=..+.+.+.-....+.|+||+.||..|.++|++ .+++..| .+..+..+|.++ +++..+..+
T Consensus 162 ~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~ 228 (272)
T PRK13223 162 ALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPG 228 (272)
T ss_pred HHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHH
Confidence 1122333333234678999999999999999997 4455332 233445789888 456666544
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0014 Score=68.70 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=35.6
Q ss_pred ccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 441 HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 441 ~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
+.+.++|+++++.|+++.++||.....+..+.+.+|+.
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 44899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00064 Score=70.85 Aligned_cols=124 Identities=18% Similarity=0.156 Sum_probs=82.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.+.++.|++.|+++.++||.....+..+-+..|+..- . ..++.+.+.. ...-.|+-
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~-f-~~i~~~~~~~----------------~~Kp~p~~ 143 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEF-F-DVVITLDDVE----------------HAKPDPEP 143 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhc-e-eEEEecCcCC----------------CCCCCcHH
Confidence 3679999999999999999999999999999999999998532 1 1111111100 01122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-Ee--ccc--cHHHhhcccEeecCCChhHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AV--ADA--TDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am--~~g--td~ak~aADivL~~~~~~~i~~ai 581 (883)
=.++.+.++-....+.|+||..+|..|-++|++-. ++ +.+ .+.....+|+++ +++..+...+
T Consensus 144 ~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 144 VLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 33444444444567899999999999999999843 23 311 223345688887 5677776654
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0015 Score=70.70 Aligned_cols=131 Identities=11% Similarity=0.090 Sum_probs=82.0
Q ss_pred CCCccHHHHHHHHHh-CCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcc---cCC-CCCCCCc---------------
Q 002768 438 PPRHDSVDTIRRALN-LGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSL---LGR-DKDENEA--------------- 497 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l---~g~-~~~~~~~--------------- 497 (883)
.+-+++.++|++|++ .|+.+.++||.+........+.+++.--..+...+ .+. ....++.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 345789999999998 79999999999999998888776642100000000 000 0000000
Q ss_pred -------------------------ccHHHHH----HhcC--------cEEEeCh--hhHHHHHHHHhhc----CCEEEE
Q 002768 498 -------------------------LPVDELI----EEAD--------GFAGVFP--EHKYEIVKILQEK----KHVVGM 534 (883)
Q Consensus 498 -------------------------~~~~~~~----~~~~--------vfar~~P--e~K~~iV~~lq~~----g~~V~m 534 (883)
..+.++. +... .+..+.| .+|...++.+.+. +..|.+
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0011111 1111 1223344 3788888776553 357889
Q ss_pred EcCCcCCHHhhhhC----CeeEEeccccHHHhhcccEeecCC
Q 002768 535 TGDGVNDAPALKKA----DIGIAVADATDAARGAADIVLTEP 572 (883)
Q Consensus 535 ~GDGvNDapALk~A----dVGIam~~gtd~ak~aADivL~~~ 572 (883)
+||+.||.+|++.+ +.||+||++.+ .|++.|.++
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~~~ 233 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLAGV 233 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCCCH
Confidence 99999999999999 99999998754 577888543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0008 Score=69.87 Aligned_cols=122 Identities=15% Similarity=0.096 Sum_probs=79.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.++++.|++.|+++.++|+-....+..+.++.|+.... ..++.+.+.. ...-.|+-
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~p~~ 146 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF--SVLIGGDSLA----------------QRKPHPDP 146 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC--cEEEecCCCC----------------CCCCChHH
Confidence 57899999999999999999999999999999999999985321 1111111100 00111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE-eccc----cHHHhhcccEeecCCChhHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VADA----TDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-m~~g----td~ak~aADivL~~~~~~~i~~ 579 (883)
=.+..+.+.-....+.|+||..||..|.++|++-.. +..| .+.....+|+++ +++..+..
T Consensus 147 ~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 147 LLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred HHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 223333333344668999999999999999998754 3222 123334688887 45555543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00087 Score=70.33 Aligned_cols=122 Identities=14% Similarity=0.124 Sum_probs=77.9
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
-++.|++.++++.|++.|+++.++|+........+.+++|+..-. ..++.+.+.. ...-.|+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~Kp~~~ 152 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYF--DALASAEKLP----------------YSKPHPE 152 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcc--cEEEEcccCC----------------CCCCCHH
Confidence 357899999999999999999999999999999999999985421 1122111100 1111222
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe-cccc---HHHhhcccEeecCCChhHHH
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-ADAT---DAARGAADIVLTEPGLSVII 578 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-~~gt---d~ak~aADivL~~~~~~~i~ 578 (883)
-=.++.+.+.-..+.|.|+||..||..|-++|++.... ..+. +.-...+|+++ .++..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 153 VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 11122222222335689999999999999999987644 2222 22223577776 4555543
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0048 Score=66.39 Aligned_cols=128 Identities=13% Similarity=0.109 Sum_probs=85.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCC----------CCCcccCCCCCCCCcccHHHHHHh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY----------PSSSLLGRDKDENEALPVDELIEE 506 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~----------~~~~l~g~~~~~~~~~~~~~~~~~ 506 (883)
-++|||+.+.++.|++.|+++.++||=....+..+.+++|+..... ....++|..-.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P------------- 186 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGP------------- 186 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCC-------------
Confidence 4689999999999999999999999999999999999999852210 11222221100
Q ss_pred cCcEEEeChhhHHHHHHH-----Hh--hcCCEEEEEcCCcCCHHhhhhC---CeeEEec--cc-----cHHHhhcccEee
Q 002768 507 ADGFAGVFPEHKYEIVKI-----LQ--EKKHVVGMTGDGVNDAPALKKA---DIGIAVA--DA-----TDAARGAADIVL 569 (883)
Q Consensus 507 ~~vfar~~Pe~K~~iV~~-----lq--~~g~~V~m~GDGvNDapALk~A---dVGIam~--~g-----td~ak~aADivL 569 (883)
-+....|.+.+.. +. .....|.|+|||.||.+|-.-. +--+.+| +. -+.=+++=||||
T Consensus 187 -----~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 187 -----LIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred -----cccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 0001345554432 22 2235688999999999996554 2234444 22 334567899999
Q ss_pred cCCChhHHHHHHH
Q 002768 570 TEPGLSVIISAVL 582 (883)
Q Consensus 570 ~~~~~~~i~~ai~ 582 (883)
.+|.=-.++.+|.
T Consensus 262 ~~D~t~~v~~~il 274 (277)
T TIGR01544 262 VQDETLEVANSIL 274 (277)
T ss_pred ECCCCchHHHHHH
Confidence 9987666776664
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0025 Score=66.68 Aligned_cols=124 Identities=18% Similarity=0.178 Sum_probs=79.8
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC-CCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT-NMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~-~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P 515 (883)
.++.+|+.+.++.|++.|+++.++|+-....+..+-+.+|+.. +.. ..++.+.+.. ..+-.|
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f-~~i~~~~~~~----------------~~KP~p 148 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV-DAVVCPSDVA----------------AGRPAP 148 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC-CEEEcCCcCC----------------CCCCCH
Confidence 4789999999999999999999999999999999999999862 211 1222221110 011112
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCeeE--Eecccc----HHHhhcccEeecCCChhHHHH
Q 002768 516 EHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGI--AVADAT----DAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 516 e~K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGI--am~~gt----d~ak~aADivL~~~~~~~i~~ 579 (883)
+-=....+.+.-. ...+.|+||+.+|..|-++|++.. ++..|. ......+|.++ ++++.+..
T Consensus 149 ~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~ 217 (220)
T TIGR03351 149 DLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPA 217 (220)
T ss_pred HHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHH
Confidence 2112222323222 356999999999999999999986 343332 12234577777 45555544
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0065 Score=65.45 Aligned_cols=42 Identities=7% Similarity=-0.007 Sum_probs=38.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCC
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMAT 479 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~ 479 (883)
..-+.+.++|++|++.||.+++.||........+.+++|+..
T Consensus 18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 455679999999999999999999999999999999999854
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0028 Score=66.05 Aligned_cols=106 Identities=11% Similarity=0.006 Sum_probs=75.0
Q ss_pred CCCccHHHHH-HHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCc-EEEeCh
Q 002768 438 PPRHDSVDTI-RRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADG-FAGVFP 515 (883)
Q Consensus 438 ~~R~~~~~~I-~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~v-far~~P 515 (883)
+++|++.+.| +.+++.|+++.++|+-....+..+++.+|+... .. +.+.+++.. .. ..+ =..+..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~---~~-~i~t~l~~~----~t-----g~~~g~~c~g 161 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR---VN-LIASQMQRR----YG-----GWVLTLRCLG 161 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc---Cc-eEEEEEEEE----Ec-----cEECCccCCC
Confidence 4589999999 578889999999999999999999999996210 01 112222110 00 000 123567
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCcCCHHhhhhCCeeEEecc
Q 002768 516 EHKYEIVKIL-QEKKHVVGMTGDGVNDAPALKKADIGIAVAD 556 (883)
Q Consensus 516 e~K~~iV~~l-q~~g~~V~m~GDGvNDapALk~AdVGIam~~ 556 (883)
+.|.+-++.. .......-+=||..||.|||+.|+-.++++.
T Consensus 162 ~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 162 HEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred hHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 8999877754 3334455688999999999999999999973
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0034 Score=66.29 Aligned_cols=123 Identities=14% Similarity=0.055 Sum_probs=81.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.+.++.|++.|+++.++|+.+...+..+-++.|+... . ..++.+.+.. ...-.|+=
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~-f-~~i~~~~~~~----------------~~KP~p~~ 156 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQR-C-AVLIGGDTLA----------------ERKPHPLP 156 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhc-c-cEEEecCcCC----------------CCCCCHHH
Confidence 5789999999999999999999999999888888888887532 1 1111111100 11122333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-Eeccc----c-HHHhhcccEeecCCChhHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVADA----T-DAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am~~g----t-d~ak~aADivL~~~~~~~i~~a 580 (883)
=.++.+.+.-....+.|+||+.||..|-++|++-. ++..| . ...+..+|+++ +++..|...
T Consensus 157 ~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~ 223 (229)
T PRK13226 157 LLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNP 223 (229)
T ss_pred HHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHH
Confidence 34455555555667999999999999999999874 33322 1 12234689988 555655443
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0054 Score=73.08 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=40.1
Q ss_pred eecCCCCC-CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 431 GLLPLFDP-PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 431 G~i~l~D~-~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
|.+.-.|. .-+.+.++|++|+++|+.+++.||.....+..+.+++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 55544333 3357899999999999999999999999999999999974
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.008 Score=65.26 Aligned_cols=121 Identities=14% Similarity=0.101 Sum_probs=80.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.++++.|++.|+++.++|+.....+..+-+.+|+.... + .++.+.+.. ..|+-
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F-~-~vi~~~~~~-------------------~k~~~ 200 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLF-S-VVQAGTPIL-------------------SKRRA 200 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhhe-E-EEEecCCCC-------------------CCHHH
Confidence 56799999999999999999999999999999999999985321 1 111111100 01211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE-eccc--cH--HHhhcccEeecCCChhHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VADA--TD--AARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-m~~g--td--~ak~aADivL~~~~~~~i~~ai 581 (883)
=..+++.++-....+.|+||+.+|..|-++|++-.. +..| +. .....+|+++ +++..+...+
T Consensus 201 ~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 201 LSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred HHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 112222232234569999999999999999998643 2232 22 3344689988 6677776654
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0059 Score=63.61 Aligned_cols=106 Identities=10% Similarity=-0.002 Sum_probs=74.7
Q ss_pred CCCccHHHHHH-HHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 438 PPRHDSVDTIR-RALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~-~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
.++|++.++|+ .+++.|++++++|+=....++.+|+..|+... ..++ +.+++..+.-.+ .=..+.-+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~---~~~i-~t~le~~~gg~~--------~g~~c~g~ 161 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR---LNLI-ASQIERGNGGWV--------LPLRCLGH 161 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc---CcEE-EEEeEEeCCceE--------cCccCCCh
Confidence 46899999996 78889999999999999999999998665221 1111 322221000000 01245678
Q ss_pred hHHHHHHHHh-hcCCEEEEEcCCcCCHHhhhhCCeeEEec
Q 002768 517 HKYEIVKILQ-EKKHVVGMTGDGVNDAPALKKADIGIAVA 555 (883)
Q Consensus 517 ~K~~iV~~lq-~~g~~V~m~GDGvNDapALk~AdVGIam~ 555 (883)
+|.+-++..- ......-+=||..||.|||+.||-.+++.
T Consensus 162 ~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 162 EKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 9998777543 23344568899999999999999999996
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.008 Score=65.03 Aligned_cols=93 Identities=14% Similarity=0.043 Sum_probs=63.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++-||+.++++.|++.|+++.++||.....+..+-+..|+..-. ...++.+.+. ....|.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~-~d~i~~~~~~------------------~~~KP~- 160 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYR-PDHVVTTDDV------------------PAGRPY- 160 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCC-ceEEEcCCcC------------------CCCCCC-
Confidence 46789999999999999999999999998888777777764211 1112211111 011121
Q ss_pred HHHHHHHHhhcC----CEEEEEcCCcCCHHhhhhCCe
Q 002768 518 KYEIVKILQEKK----HVVGMTGDGVNDAPALKKADI 550 (883)
Q Consensus 518 K~~iV~~lq~~g----~~V~m~GDGvNDapALk~AdV 550 (883)
..-+.+.+++.| ..+.|+||..+|..|-++|++
T Consensus 161 p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 161 PWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred hHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 122334444432 468999999999999999997
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0085 Score=64.20 Aligned_cols=98 Identities=14% Similarity=0.066 Sum_probs=66.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.+.++.|++.|+++.++||.....+..+-+++|+..-. ...++.+.+.. ...-.|+-
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f-~d~ii~~~~~~----------------~~KP~p~~ 161 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYR-PDYNVTTDDVP----------------AGRPAPWM 161 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCC-CceEEccccCC----------------CCCCCHHH
Confidence 46789999999999999999999999999999998988885321 11222221110 01112332
Q ss_pred HHHHHHHHhhc-CCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 518 KYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 518 K~~iV~~lq~~-g~~V~m~GDGvNDapALk~AdVGI 552 (883)
=.+..+.+.-. .+.+.|+||..+|..|-++|++-.
T Consensus 162 ~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 162 ALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 23333333322 345899999999999999999643
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.02 Score=71.00 Aligned_cols=169 Identities=18% Similarity=0.146 Sum_probs=99.8
Q ss_pred HHHHHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecC--CCCCCCccHHHHHHHHHh-CCCeEEEEccCcHHHHHH
Q 002768 394 HTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLP--LFDPPRHDSVDTIRRALN-LGVCVKMITGDQLAIAKE 470 (883)
Q Consensus 394 ~~~~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~--l~D~~R~~~~~~I~~l~~-aGI~v~miTGD~~~tA~~ 470 (883)
+.....|.+.-.|.+++-++. +++.... -...+-+++.+++++|.+ .|+.|+++||........
T Consensus 481 ~~~~~~y~~~~~rLi~~D~DG-------------TL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~ 547 (726)
T PRK14501 481 EEIIARYRAASRRLLLLDYDG-------------TLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLER 547 (726)
T ss_pred HHHHHHHHhccceEEEEecCc-------------cccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHH
Confidence 334445555556777776665 4443211 112367899999999999 699999999999998887
Q ss_pred HHHHcCCCCCCCCCCccc--CCCCCCC---C-------------------------------------ccc--------H
Q 002768 471 TGRRLGMATNMYPSSSLL--GRDKDEN---E-------------------------------------ALP--------V 500 (883)
Q Consensus 471 ia~~lGi~~~~~~~~~l~--g~~~~~~---~-------------------------------------~~~--------~ 500 (883)
....+++.--..+...+. +.+.... . +.+ +
T Consensus 548 ~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l 627 (726)
T PRK14501 548 WFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANEL 627 (726)
T ss_pred HhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHH
Confidence 765555310000000000 0000000 0 000 1
Q ss_pred HHHHHh----cC-------cEEEeCh--hhHHHHHHHHhhc--CCEEEEEcCCcCCHHhhhhC---CeeEEeccccHHHh
Q 002768 501 DELIEE----AD-------GFAGVFP--EHKYEIVKILQEK--KHVVGMTGDGVNDAPALKKA---DIGIAVADATDAAR 562 (883)
Q Consensus 501 ~~~~~~----~~-------vfar~~P--e~K~~iV~~lq~~--g~~V~m~GDGvNDapALk~A---dVGIam~~gtd~ak 562 (883)
.+.+.. .. -+-.+.| -+|...++.+.+. ...|+++||+.||.+|++.+ ..+|+||++ +
T Consensus 628 ~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~ 703 (726)
T PRK14501 628 ILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----E 703 (726)
T ss_pred HHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----C
Confidence 111111 00 1123344 4798888888873 35899999999999999997 588888874 4
Q ss_pred hcccEeecCCChhHHHHHH
Q 002768 563 GAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 563 ~aADivL~~~~~~~i~~ai 581 (883)
.+|++.|.++ ..+...+
T Consensus 704 s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 704 SRARYRLPSQ--REVRELL 720 (726)
T ss_pred CcceEeCCCH--HHHHHHH
Confidence 5788999654 3344433
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0074 Score=65.01 Aligned_cols=120 Identities=16% Similarity=0.040 Sum_probs=78.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+|+.+.++.|++.|+++.++|+.....+..+-+.+|+..- -..++.+.+.. ...-.|+-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~--Fd~ii~~~d~~----------------~~KP~Pe~ 170 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGF--FSVVLAAEDVY----------------RGKPDPEM 170 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhh--CcEEEecccCC----------------CCCCCHHH
Confidence 4689999999999999999999999999999999999998531 11222222211 01111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-Eec-cccHHHhhcccEeecCCChhHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVA-DATDAARGAADIVLTEPGLSVI 577 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am~-~gtd~ak~aADivL~~~~~~~i 577 (883)
=....+.+.-....+.|+||..+|..|-++|++-. ++. .........+|+++ ++++.+
T Consensus 171 ~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi--~~~~el 230 (260)
T PLN03243 171 FMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVV--RRLDDL 230 (260)
T ss_pred HHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEe--CCHHHH
Confidence 22334444444566999999999999999999843 332 22222233578776 444443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.007 Score=62.50 Aligned_cols=39 Identities=28% Similarity=0.387 Sum_probs=35.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcC
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLG 476 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 476 (883)
++.+++.+++++|++.|+++.++||.....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 477899999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0022 Score=66.03 Aligned_cols=94 Identities=19% Similarity=0.104 Sum_probs=67.9
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P 515 (883)
.+++.++++++++.|++.|+++.++||-....+..+-+.+|+..- . ..++.+.+ +..+-.|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-f-~~~~~~~~-----------------~~~KP~p 164 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEIL-F-PVQIWMED-----------------CPPKPNP 164 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhh-C-CEEEeecC-----------------CCCCcCH
Confidence 355677889999999999999999999999999999999998532 1 11221111 1113345
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhC
Q 002768 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKA 548 (883)
Q Consensus 516 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~A 548 (883)
+--..+.+.+.-....|.|+||+.+|..|-++|
T Consensus 165 ~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 165 EPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 554556666655667799999999999887765
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.011 Score=63.24 Aligned_cols=117 Identities=13% Similarity=0.144 Sum_probs=79.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.++++.|++.|+++.++|+-....+...-+++|+..- . ..++.+.+.. ...-.|+-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~-F-d~iv~~~~~~----------------~~KP~p~~ 169 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDF-F-QAVIIGSECE----------------HAKPHPDP 169 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhh-C-cEEEecCcCC----------------CCCCChHH
Confidence 4678999999999999999999999999999999999998532 1 1222222211 11222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE-ecccc---HHHhhcccEeecCC
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VADAT---DAARGAADIVLTEP 572 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa-m~~gt---d~ak~aADivL~~~ 572 (883)
=....+.++-....+.|+||..+|..|-++|++-.. +..|. +.....+|+++.+.
T Consensus 170 ~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~ 228 (248)
T PLN02770 170 YLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDY 228 (248)
T ss_pred HHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccc
Confidence 344445555455678999999999999999998543 32222 22234688888543
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.023 Score=57.85 Aligned_cols=140 Identities=20% Similarity=0.241 Sum_probs=93.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCC--Cccc---------------HH
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDEN--EALP---------------VD 501 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~--~~~~---------------~~ 501 (883)
+-||+.++.+.+.+. ...+++|---..-+..+|..+|++........+ ++|.. +.++ -+
T Consensus 84 lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~---~lD~~~~PeeeR~E~L~~~~~~~~~~ge 159 (315)
T COG4030 84 LVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEV---DLDSIAVPEEEREELLSIIDVIASLSGE 159 (315)
T ss_pred cCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccc---cCccccCChHHHHHHHHhcCccccccHH
Confidence 458999999988765 456667777788889999999996432211111 11111 1111 12
Q ss_pred HHHHhcC-cEEEeChhhHHHHHHHHh---------------hc---CCEEEEEcCCcCCHHhhhhCC-e-eEEec-cccH
Q 002768 502 ELIEEAD-GFAGVFPEHKYEIVKILQ---------------EK---KHVVGMTGDGVNDAPALKKAD-I-GIAVA-DATD 559 (883)
Q Consensus 502 ~~~~~~~-vfar~~Pe~K~~iV~~lq---------------~~---g~~V~m~GDGvNDapALk~Ad-V-GIam~-~gtd 559 (883)
++.++.+ .|.|..|..-.+|++..+ +. ....+.+||.+.|..||+.+. - |+|++ ||.+
T Consensus 160 elfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 160 ELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 2233322 578888865444444433 31 234578999999999999884 3 48887 8888
Q ss_pred HHhhcccEeecCCChhHHHHHHH
Q 002768 560 AARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 560 ~ak~aADivL~~~~~~~i~~ai~ 582 (883)
=|..-||+.+..++.++....|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 88889999999999998888775
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0068 Score=64.11 Aligned_cols=89 Identities=19% Similarity=0.219 Sum_probs=63.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccC----cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGD----QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
.|.+++++.++.+++.|+++.++||. ...++..+.+..|++.+.+-...+.|...
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 47788999999999999999999995 46799999999999532111122221110
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
.-++|.. .+++.| .+.|+||..+|..|-++|++-
T Consensus 173 ~K~~K~~---~l~~~~-i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 173 GQYTKTQ---WLKKKN-IRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred CCCCHHH---HHHhcC-CeEEEcCCHHHHHHHHHcCCc
Confidence 1134544 344444 488999999999999999874
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.009 Score=69.92 Aligned_cols=123 Identities=11% Similarity=0.075 Sum_probs=82.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
+|.||+.+.++.|++.|+++.++|+-....+..+-+.+|+..-. ..++.+.+.. ..-.|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f--~~i~~~d~v~-----------------~~~kP~~ 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWV--TETFSIEQIN-----------------SLNKSDL 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhc--ceeEecCCCC-----------------CCCCcHH
Confidence 68899999999999999999999999999999999999985321 1122222111 0111321
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEecc--ccHHHhhcccEeecCCChhHHHHHHHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAD--ATDAARGAADIVLTEPGLSVIISAVLT 583 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam~~--gtd~ak~aADivL~~~~~~~i~~ai~~ 583 (883)
=....+.+ ....+.|+||..+|..|-++|++ .|++.. +.+.....+|+++ ++++.+...+..
T Consensus 391 ~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 455 (459)
T PRK06698 391 VKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILST 455 (459)
T ss_pred HHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHH
Confidence 11222222 23569999999999999999997 445532 2222234688887 567777776644
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0088 Score=65.78 Aligned_cols=109 Identities=17% Similarity=0.082 Sum_probs=77.3
Q ss_pred CCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 434 PLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 434 ~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
...|++.+++.+++++|++.|+++.++||.....+..+.+.+|+....++ .+.|.+. ....++.. .--+-
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~--~i~~~~~-------~~~~~~~~-~~~kp 252 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFD--DLIGRPP-------DMHFQREQ-GDKRP 252 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchh--hhhCCcc-------hhhhcccC-CCCCC
Confidence 36688999999999999999999999999999999999999988531111 1111110 00000000 01244
Q ss_pred ChhhHHHHHHHHhh-cCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 514 FPEHKYEIVKILQE-KKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~-~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
.|+-+.+..+.+-. ....+.|+||..||+.+-++|++-.
T Consensus 253 ~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 253 DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 47777777776543 3478999999999999999999874
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.016 Score=60.66 Aligned_cols=114 Identities=13% Similarity=0.106 Sum_probs=73.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.++++.|++.|+++.++|+.....+...-+..|+.. . ..++.+.+.. ...-.|+-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~--~-~~i~~~~~~~----------------~~KP~p~~ 143 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA--P-EVFVTAERVK----------------RGKPEPDA 143 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC--c-cEEEEHHHhc----------------CCCCCcHH
Confidence 578999999999999999999999988776666666677632 1 1122111100 01112332
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee-EEecccc-HHHhhcccEeec
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVADAT-DAARGAADIVLT 570 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG-Iam~~gt-d~ak~aADivL~ 570 (883)
=....+.+.-....+.|+||..+|..|-++|++- |++..+. +.....+|+++.
T Consensus 144 ~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 144 YLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLH 198 (218)
T ss_pred HHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEec
Confidence 2333334433456799999999999999999984 5665432 223345777763
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.01 Score=62.72 Aligned_cols=88 Identities=19% Similarity=0.209 Sum_probs=61.6
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccC----cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGD----QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD----~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
|.+++++.++.+++.|+++.++|+- ...++..+.+.+|+... -..++.+.... .-.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~--f~~i~~~d~~~------------------~~K 174 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAM--NPVIFAGDKPG------------------QYQ 174 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchh--eeEEECCCCCC------------------CCC
Confidence 4555999999999999999999997 67799999999999531 11122221111 001
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 515 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
| +|. ..+++.| .+.|+||..||..+-++|++-
T Consensus 175 p-~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 175 Y-TKT---QWIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred C-CHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 2 233 2445555 478999999999999999764
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.017 Score=60.32 Aligned_cols=99 Identities=20% Similarity=0.211 Sum_probs=66.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.+++++|++.|+++.++|+-+...+...-+++|+..- . ..++.+.+. .+..|..
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-~~i~~~~~~------------------~~~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDF-F-DAVITSEEE------------------GVEKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHh-c-cEEEEeccC------------------CCCCCCH
Confidence 4789999999999999999999999988888888888888431 1 112211111 1122321
Q ss_pred H--HHHHHHHhhcCCEEEEEcCCc-CCHHhhhhCCe-eEEecc
Q 002768 518 K--YEIVKILQEKKHVVGMTGDGV-NDAPALKKADI-GIAVAD 556 (883)
Q Consensus 518 K--~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdV-GIam~~ 556 (883)
. ..+.+.+.-....+.|+||.. +|..+-++|++ .|.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~ 196 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQ 196 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECC
Confidence 1 222233322345689999998 99999999987 445543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.028 Score=56.60 Aligned_cols=121 Identities=9% Similarity=-0.009 Sum_probs=70.1
Q ss_pred CCeEeEEeeecccccccCCCCCCceEEeecCCCC----CCCccHHHHHHHHHhCCCeEEEEccCcHH--------HHHHH
Q 002768 404 GLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFD----PPRHDSVDTIRRALNLGVCVKMITGDQLA--------IAKET 471 (883)
Q Consensus 404 G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D----~~R~~~~~~I~~l~~aGI~v~miTGD~~~--------tA~~i 471 (883)
|+|+|.+=... ++.|-..+.+ ++-||+++++++|++.|+++.++|+.... .....
T Consensus 3 ~~~~~~~d~d~-------------~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~ 69 (173)
T PRK06769 3 NIQAIFIDRDG-------------TIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQE 69 (173)
T ss_pred CCcEEEEeCCC-------------cccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHH
Confidence 67777765554 3333333332 26799999999999999999999987631 12222
Q ss_pred HHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 472 GRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 472 a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
-+..|+..- +......+.+. ....-.|+-=.++.+.+.-..+.+.|+||..+|..|=++|++-
T Consensus 70 l~~~g~~~~-~~~~~~~~~~~----------------~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 70 LKGFGFDDI-YLCPHKHGDGC----------------ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred HHhCCcCEE-EECcCCCCCCC----------------CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 344555321 00000000000 0111123322344444443446799999999999999999986
Q ss_pred EEe
Q 002768 552 IAV 554 (883)
Q Consensus 552 Iam 554 (883)
...
T Consensus 133 ~i~ 135 (173)
T PRK06769 133 TIL 135 (173)
T ss_pred EEE
Confidence 543
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.038 Score=55.99 Aligned_cols=128 Identities=21% Similarity=0.124 Sum_probs=71.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcH---------------HHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHH
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQL---------------AIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDE 502 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 502 (883)
.+.||+.+++++|++.|+++.++|.... .....+-++.|+.-+ .++....... + +
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~----~i~~~~~~~~--~-~--- 98 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD----GIYYCPHHPE--D-G--- 98 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc----eEEECCCCCC--C-C---
Confidence 3679999999999999999999998762 111222334454210 0110000000 0 0
Q ss_pred HHHhcCcEEEeChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-EeccccH---HHhhcc--cEeecCCChhH
Q 002768 503 LIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVADATD---AARGAA--DIVLTEPGLSV 576 (883)
Q Consensus 503 ~~~~~~vfar~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am~~gtd---~ak~aA--DivL~~~~~~~ 576 (883)
.....-.|+--....+.+.-..+.+.|+||..+|..+-++|++.. .+..|.. .....+ |.++ +++..
T Consensus 99 -----~~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~e 171 (181)
T PRK08942 99 -----CDCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLAD 171 (181)
T ss_pred -----CcCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHH
Confidence 001122233334444445445577999999999999999999743 2223322 112235 7777 55666
Q ss_pred HHHHHH
Q 002768 577 IISAVL 582 (883)
Q Consensus 577 i~~ai~ 582 (883)
+...+.
T Consensus 172 l~~~l~ 177 (181)
T PRK08942 172 LPQALK 177 (181)
T ss_pred HHHHHH
Confidence 666553
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.02 Score=58.76 Aligned_cols=95 Identities=16% Similarity=0.164 Sum_probs=65.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.+++++|++.|+++.++|+-+......+.+++|+... . ..++.+.+. ....|.-
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~-f-d~i~~s~~~------------------~~~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDP-F-DAVLSADAV------------------RAYKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhh-h-heeEehhhc------------------CCCCCCH
Confidence 5789999999999999999999999888888888899997422 1 112211111 1112321
Q ss_pred H--HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 518 K--YEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 518 K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
. ..+.+.+.-....+.|+||+.+|..+-++|++-.
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 1 2233333334466899999999999999988753
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.034 Score=59.51 Aligned_cols=67 Identities=24% Similarity=0.298 Sum_probs=44.8
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhCCeeEEeccccHH-----Hhh---cccEee-cCCChhHHHHHHH
Q 002768 516 EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDA-----ARG---AADIVL-TEPGLSVIISAVL 582 (883)
Q Consensus 516 e~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~AdVGIam~~gtd~-----ak~---aADivL-~~~~~~~i~~ai~ 582 (883)
..|...|+.|+++ .+.|..+||.-||.+||..++-||.++|+.+. ... ...+.. ..+.-.+|.++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4799999988874 23567789999999999999999999998877 222 223333 3444555666654
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.02 Score=56.60 Aligned_cols=111 Identities=13% Similarity=0.035 Sum_probs=68.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
.++|+-++.++.+++.+++++++|+-.......+-.+++=-...+...+..... .........++-. .-...-.+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~--~ih~dg~h~i~~~---~ds~fG~d 147 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNND--YIHIDGQHSIKYT---DDSQFGHD 147 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCc--eEcCCCceeeecC---CccccCCC
Confidence 478999999999999999999999887666666666555111000000000000 0000000000000 01233468
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
|-..|+.|++..+.+-|+|||+.|..|-|.+|+=.|
T Consensus 148 K~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 148 KSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 999999999999999999999999887776655443
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.038 Score=52.73 Aligned_cols=92 Identities=16% Similarity=0.126 Sum_probs=63.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCc--------HHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCc
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQ--------LAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADG 509 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~--------~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~v 509 (883)
++.+++.++++.|++.|+++.++|+.. .+...++.+++|+.... ....+ .
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~~-~------------------ 82 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV---LYACP-H------------------ 82 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE---EEECC-C------------------
Confidence 578999999999999999999999998 77788888888875211 01110 0
Q ss_pred EEEeChhhHHHHHHHHh-hcCCEEEEEcC-CcCCHHhhhhCCee
Q 002768 510 FAGVFPEHKYEIVKILQ-EKKHVVGMTGD-GVNDAPALKKADIG 551 (883)
Q Consensus 510 far~~Pe~K~~iV~~lq-~~g~~V~m~GD-GvNDapALk~AdVG 551 (883)
+..-.|+-=..+.+.++ -....+.|+|| -.+|..+-++|++=
T Consensus 83 ~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00111222223444442 34567999999 59999999998763
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.037 Score=60.58 Aligned_cols=115 Identities=18% Similarity=0.112 Sum_probs=70.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCC-CcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPS-SSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
++.||+.+.++.|++.|+++.++|+-.......+-+..+... .... ..+.+.+.. ...-.|+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~-~~~~~~~v~~~~~~----------------~~KP~p~ 206 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPE-RAQGLDVFAGDDVP----------------KKKPDPD 206 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhcccc-ccCceEEEeccccC----------------CCCCCHH
Confidence 578999999999999999999999988777766655543211 0000 111111100 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEec-ccc--HHHhhcccEee
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVA-DAT--DAARGAADIVL 569 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam~-~gt--d~ak~aADivL 569 (883)
-=..+.+.+.-....+.|+||+.+|..|-++|++....- .|. .-....+|+++
T Consensus 207 ~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi 262 (286)
T PLN02779 207 IYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVF 262 (286)
T ss_pred HHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEE
Confidence 223344444444567999999999999999999875542 332 11123578887
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.16 Score=57.45 Aligned_cols=68 Identities=25% Similarity=0.252 Sum_probs=48.5
Q ss_pred EEEeChh---hHHHHHHHHhhc-C-----C-EEEEEcCCcCCHHhhhh-----CCeeEEeccccHHHhhcccEeecCCCh
Q 002768 510 FAGVFPE---HKYEIVKILQEK-K-----H-VVGMTGDGVNDAPALKK-----ADIGIAVADATDAARGAADIVLTEPGL 574 (883)
Q Consensus 510 far~~Pe---~K~~iV~~lq~~-g-----~-~V~m~GDGvNDapALk~-----AdVGIam~~gtd~ak~aADivL~~~~~ 574 (883)
+-++.|. +|...|+.+.++ | . .+.++||+.||-+|++. +++||+|++|.+.. .|++.|-+ -
T Consensus 291 vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p 366 (384)
T PLN02580 291 VLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--P 366 (384)
T ss_pred EEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--H
Confidence 3455664 899888887653 2 1 25899999999999996 69999999766533 67888844 4
Q ss_pred hHHHHHH
Q 002768 575 SVIISAV 581 (883)
Q Consensus 575 ~~i~~ai 581 (883)
..+...+
T Consensus 367 ~eV~~~L 373 (384)
T PLN02580 367 SEVMEFL 373 (384)
T ss_pred HHHHHHH
Confidence 4444444
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.0094 Score=58.98 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=68.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
.++.+++.+.+++|++.|++++++|+-.........+++|+..- ...++.+.+... ..-.|+
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~--f~~i~~~~~~~~----------------~Kp~~~ 137 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDY--FDEIISSDDVGS----------------RKPDPD 137 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGG--CSEEEEGGGSSS----------------STTSHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccc--cccccccchhhh----------------hhhHHH
Confidence 45789999999999999999999999999999999999998621 122222211110 011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
-=..+.+.++-..+.+.|+||..+|..+-++|++-
T Consensus 138 ~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 138 AYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIK 172 (176)
T ss_dssp HHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCe
Confidence 22344445544567799999999999999998864
|
... |
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.018 Score=47.68 Aligned_cols=30 Identities=37% Similarity=0.669 Sum_probs=28.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVL 31 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~~~~ 31 (883)
++++|++|+++|++|+.++|++++++++++
T Consensus 33 ~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 33 KRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 368999999999999999999999999987
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.018 Score=58.11 Aligned_cols=94 Identities=11% Similarity=-0.015 Sum_probs=58.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.||+.++++.|+++|+++.++|+... +...-+++|+.... ..++.+.+.. ..+-.|+-
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f--~~~~~~~~~~----------------~~kp~p~~ 146 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF--DAIVDPAEIK----------------KGKPDPEI 146 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC--cEEEehhhcC----------------CCCCChHH
Confidence 5779999999999999999999997532 35567778874221 1112111110 11111221
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
=....+.+.-....+.|+||..+|..+-++|++-
T Consensus 147 ~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 147 FLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred HHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 1222333322335689999999999999999874
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.011 Score=63.23 Aligned_cols=59 Identities=25% Similarity=0.352 Sum_probs=50.0
Q ss_pred EEeCh--hhHHHHHHHHhhcCCEEEEEcC----CcCCHHhhhhC-CeeEEeccccHHHhhcccEee
Q 002768 511 AGVFP--EHKYEIVKILQEKKHVVGMTGD----GVNDAPALKKA-DIGIAVADATDAARGAADIVL 569 (883)
Q Consensus 511 ar~~P--e~K~~iV~~lq~~g~~V~m~GD----GvNDapALk~A-dVGIam~~gtd~ak~aADivL 569 (883)
..+.| -+|..-++.|.++.+.|+++|| |-||.+||+.| -.|+++++++|..|..+.+++
T Consensus 180 leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 180 FDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred EEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 34455 4799999999888889999999 99999999987 688999999999998776554
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.036 Score=58.37 Aligned_cols=100 Identities=12% Similarity=-0.022 Sum_probs=66.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh--
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP-- 515 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P-- 515 (883)
++.||+.+.++.|++.|+++.++|+-....+...-+..|+..- . ..++.+.+. .+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~iv~s~~~------------------~~~KP~p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAH-L-DLLLSTHTF------------------GYPKEDQ 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHH-C-CEEEEeeeC------------------CCCCCCH
Confidence 5789999999999999999999999888888877777887421 1 112211111 11112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee--EEeccc
Q 002768 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAVADA 557 (883)
Q Consensus 516 e~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iam~~g 557 (883)
+-=....+.+.-....+.|+||..+|..+-++|++. +++.++
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~~ 196 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTNP 196 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeCC
Confidence 211222233333345699999999999999999996 455543
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.061 Score=60.70 Aligned_cols=120 Identities=16% Similarity=0.110 Sum_probs=80.2
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+|+.+.++.|++.|+++.++|+-....+..+-+.+||..- -..++.+.+.. ...-.|+-
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~y--Fd~Iv~sddv~----------------~~KP~Pei 277 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGF--FSVIVAAEDVY----------------RGKPDPEM 277 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHH--ceEEEecCcCC----------------CCCCCHHH
Confidence 4679999999999999999999999999999999999998531 11122221110 01112332
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe-ccccHHHh-hcccEeecCCChhHH
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV-ADATDAAR-GAADIVLTEPGLSVI 577 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam-~~gtd~ak-~aADivL~~~~~~~i 577 (883)
=....+.++-....+.|+||..+|+.|-++|++-... .++.+... ..||+++ +++..+
T Consensus 278 fl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 278 FIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEE--CCHHHH
Confidence 2344445554567799999999999999999985433 34333322 3588887 455543
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.045 Score=57.06 Aligned_cols=119 Identities=11% Similarity=0.087 Sum_probs=74.8
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.+.+++|++. +++.++|+-....+..+-+++|+..-. ..++.+.+.. ...|..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f--d~i~~~~~~~------------------~~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF--DDIFVSEDAG------------------IQKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc--CEEEEcCccC------------------CCCCCH
Confidence 5789999999999999 999999999888888888999985321 1122111100 112322
Q ss_pred H--HHHHHHH-hhcCCEEEEEcCCc-CCHHhhhhCCe-eEEecc--ccHHHhhcccEeecCCChhHHHH
Q 002768 518 K--YEIVKIL-QEKKHVVGMTGDGV-NDAPALKKADI-GIAVAD--ATDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 518 K--~~iV~~l-q~~g~~V~m~GDGv-NDapALk~AdV-GIam~~--gtd~ak~aADivL~~~~~~~i~~ 579 (883)
. ....+.+ .-....+.|+||.. +|..+=+++++ +|.+.. .++.....+|.++ ++++.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~ 222 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYE 222 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHh
Confidence 1 2233333 22345689999998 89999999997 344432 2222223566666 45555543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.049 Score=54.73 Aligned_cols=94 Identities=15% Similarity=0.054 Sum_probs=62.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.|++.+.++.|++.|+++.++|+-.... ..+..++|+... -..++.+.+.. ...-.|+-
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~--f~~i~~~~~~~----------------~~KP~~~~ 145 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDL--FDVVIFSGDVG----------------RGKPDPDI 145 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHH--CCEEEEcCCCC----------------CCCCCHHH
Confidence 578999999999999999999999988777 555556887431 11112111100 11112333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI 550 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV 550 (883)
=..+.+.+.-....+.|+||...|..+-++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 146 YLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred HHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 333444444455779999999999999998877
|
HAD subfamilies caused by an overly broad single model. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.13 Score=50.97 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=65.8
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHH---HHHHHc---C--CCCCCCCCCcccCCCCCCCCcccHHHHHHhc
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAK---ETGRRL---G--MATNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~---~ia~~l---G--i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 507 (883)
+|.+.++++++++++++.|+++..+||.....+. ...+++ | ++. ..++.... ..+.. ..+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~----g~li~~~g------~~~~~-~~~- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH----GPVLLSPD------RLFAA-LHR- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC----ceEEEcCC------cchhh-hhc-
Confidence 4678899999999999999999999999987774 444442 2 321 11110000 00000 000
Q ss_pred CcEEEeCh-hhHHHHHHHHhh-----cCCEEEEEcCCcCCHHhhhhCCe
Q 002768 508 DGFAGVFP-EHKYEIVKILQE-----KKHVVGMTGDGVNDAPALKKADI 550 (883)
Q Consensus 508 ~vfar~~P-e~K~~iV~~lq~-----~g~~V~m~GDGvNDapALk~AdV 550 (883)
.+. .-.| +.|.+.++.+++ ....++..||+.+|+.+-++++|
T Consensus 93 e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 93 EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 111 2224 348888888887 45678889999999999988765
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.034 Score=56.12 Aligned_cols=93 Identities=12% Similarity=0.106 Sum_probs=60.2
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
-++.||+.++++.|++.|+++.++|+- ..+..+-+++|+..- . ..++.+.+. .+..|.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~-f-~~v~~~~~~------------------~~~kp~ 144 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDY-F-DAIVDADEV------------------KEGKPH 144 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHH-C-CEeeehhhC------------------CCCCCC
Confidence 368899999999999999999999987 556777788887421 1 111111110 011222
Q ss_pred hH--HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 517 HK--YEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 517 ~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
.. .++.+.+.-..+.+.|+||..+|..+-++|++-
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 11 122222322345688999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.12 Score=52.24 Aligned_cols=124 Identities=19% Similarity=0.139 Sum_probs=65.7
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcH---------------HHHHHHHHHcCCCCCC-CC-CCcccCCCCCCCCcccHH
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQL---------------AIAKETGRRLGMATNM-YP-SSSLLGRDKDENEALPVD 501 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~~-~~-~~~l~g~~~~~~~~~~~~ 501 (883)
+.|++.+++++|+++|+++.++|.-.. .....+-.+.|+.-+. +. .....+ .+..+
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~--~~~~~----- 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG--VEEFR----- 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc--ccccc-----
Confidence 568999999999999999999997653 1111233333432110 00 000000 00000
Q ss_pred HHHHhcCcEEEeChh--hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee--EEeccccH---HHhhcccEeecCCCh
Q 002768 502 ELIEEADGFAGVFPE--HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAVADATD---AARGAADIVLTEPGL 574 (883)
Q Consensus 502 ~~~~~~~vfar~~Pe--~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG--Iam~~gtd---~ak~aADivL~~~~~ 574 (883)
+-.....|. -=....+.+.-....+.|+||..+|..|-++|++. |.+..|.. .....+|+++ +++
T Consensus 100 ------~~~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i--~~~ 171 (176)
T TIGR00213 100 ------QVCDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVL--NSL 171 (176)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEe--ccH
Confidence 000011222 11222233332346688999999999999999985 35443322 2223488888 445
Q ss_pred hHH
Q 002768 575 SVI 577 (883)
Q Consensus 575 ~~i 577 (883)
..+
T Consensus 172 ~el 174 (176)
T TIGR00213 172 ADL 174 (176)
T ss_pred HHh
Confidence 443
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.098 Score=52.68 Aligned_cols=111 Identities=8% Similarity=-0.041 Sum_probs=69.8
Q ss_pred EEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccC-cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhc
Q 002768 429 FCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGD-QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 429 ~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~ 507 (883)
......-.-+++||+.+.++.|+++|+++.++|+- ....+..+-..+|+...... ..+.+... .
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~--------------~~~~~~Fd-~ 100 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKT--------------VPMHSLFD-D 100 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCc--------------ccHHHhce-e
Confidence 33444445578899999999999999999999965 88899888888887411000 00000000 0
Q ss_pred CcEEEeChhhH--HHHHHHHhhc------CCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 508 DGFAGVFPEHK--YEIVKILQEK------KHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 508 ~vfar~~Pe~K--~~iV~~lq~~------g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
-+.+.-.+..| .++.+.+.+. ...+.|+||...|+.+-++|++-...
T Consensus 101 iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 101 RIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred eeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 01111111111 2334444432 35799999999999999999886654
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.11 Score=54.26 Aligned_cols=121 Identities=15% Similarity=0.128 Sum_probs=74.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh-
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE- 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe- 516 (883)
++.||+.++++.|+ .|+++.++|......+...-++.|+..- . ..++.+.+. ....|.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~-f-d~v~~~~~~------------------~~~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDY-F-DLLVISEQV------------------GVAKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHH-c-CEEEEECcc------------------CCCCCCH
Confidence 47899999999999 6899999999988888887788887421 1 111111110 001232
Q ss_pred -hHHHHHHHHhhc-CCEEEEEcCCc-CCHHhhhhCCee-EEec-cccH-HHhhcccEeecCCChhHHHHHH
Q 002768 517 -HKYEIVKILQEK-KHVVGMTGDGV-NDAPALKKADIG-IAVA-DATD-AARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 517 -~K~~iV~~lq~~-g~~V~m~GDGv-NDapALk~AdVG-Iam~-~gtd-~ak~aADivL~~~~~~~i~~ai 581 (883)
-=..+++.+.-. ...+.|+||.. +|..+-++|++- |.+. .+.. .....+|+++ +++..+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 112223333211 24699999998 799999999985 4444 2221 1112478777 5566665543
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.085 Score=60.16 Aligned_cols=114 Identities=18% Similarity=0.115 Sum_probs=71.1
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHH-HcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGR-RLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~-~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
++.||+.+.++.|++.|+++.++|+-....+...-+ ..|+.... ..++.+.+.. ...-.|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F--d~ii~~d~v~----------------~~KP~p~ 154 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF--SVIVGGDEVE----------------KGKPSPD 154 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC--CEEEehhhcC----------------CCCCCHH
Confidence 467999999999999999999999998887776554 56763211 1111111100 0111122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE-Eeccc--cHHHhhcccEee
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVADA--TDAARGAADIVL 569 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI-am~~g--td~ak~aADivL 569 (883)
-=.++.+.+.-..+.|.|+||..+|..|-++|++.. ++..+ .+.....+|.++
T Consensus 155 ~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 155 IFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred HHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 222333344334567999999999999999999874 33332 233334566665
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.34 Score=47.60 Aligned_cols=108 Identities=15% Similarity=0.198 Sum_probs=76.2
Q ss_pred HHHHHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcC
Q 002768 397 IDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLG 476 (883)
Q Consensus 397 ~~~~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG 476 (883)
.+.+.++|+|.+.+=.++ +++..= ....-|++.+=+++++++|+++.++|--+...+...++.+|
T Consensus 20 ~~~L~~~Gikgvi~DlDN-------------TLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~ 84 (175)
T COG2179 20 PDILKAHGIKGVILDLDN-------------TLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLG 84 (175)
T ss_pred HHHHHHcCCcEEEEeccC-------------ceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcC
Confidence 467888999998876554 333221 12245788888999999999999999999999999999999
Q ss_pred CCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe-ChhhHHHHHHHHhhc---CCEEEEEcCCc-CCHHhhhhCCe
Q 002768 477 MATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV-FPEHKYEIVKILQEK---KHVVGMTGDGV-NDAPALKKADI 550 (883)
Q Consensus 477 i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~-~Pe~K~~iV~~lq~~---g~~V~m~GDGv-NDapALk~AdV 550 (883)
++- ..+. .|-- ..+-+++++. .+.|+|+||-. -|.-+=+.|++
T Consensus 85 v~f------------------------------i~~A~KP~~-~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 85 VPF------------------------------IYRAKKPFG-RAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred Cce------------------------------eecccCccH-HHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 852 1222 2322 3455566654 46799999997 58776665544
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.099 Score=52.49 Aligned_cols=107 Identities=16% Similarity=0.172 Sum_probs=70.9
Q ss_pred HHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCeEEEEccCc-HHHHHHHHHHcCCC
Q 002768 400 FAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQ-LAIAKETGRRLGMA 478 (883)
Q Consensus 400 ~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~-~~tA~~ia~~lGi~ 478 (883)
+.+.|.+.+.+-.+. ++.- .=...+-+++.+++++|++.|+++.++|+-+ ...+..+.+.+|+.
T Consensus 20 ~~~~~v~~vv~D~Dg-------------tl~~--~~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~ 84 (170)
T TIGR01668 20 LKKVGIKGVVLDKDN-------------TLVY--PDHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP 84 (170)
T ss_pred HHHCCCCEEEEecCC-------------cccc--CCCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE
Confidence 345788887776543 1110 0123577999999999999999999999988 67788888888864
Q ss_pred CCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhh---cCCEEEEEcCCc-CCHHhhhhCCee
Q 002768 479 TNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQE---KKHVVGMTGDGV-NDAPALKKADIG 551 (883)
Q Consensus 479 ~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~---~g~~V~m~GDGv-NDapALk~AdVG 551 (883)
.. .+ ...|.-. -+-..+++ ....+.|+||.. .|..+-++|++-
T Consensus 85 ~~-------~~----------------------~~KP~p~-~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 85 VL-------PH----------------------AVKPPGC-AFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EE-------cC----------------------CCCCChH-HHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 11 00 0112111 12222332 345699999998 799999999884
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.091 Score=51.33 Aligned_cols=96 Identities=21% Similarity=0.174 Sum_probs=58.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcH---------------HHHHHHHHHcCCCCC-CCCCCcccCCCCCCCCcccHH
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQL---------------AIAKETGRRLGMATN-MYPSSSLLGRDKDENEALPVD 501 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~---------------~tA~~ia~~lGi~~~-~~~~~~l~g~~~~~~~~~~~~ 501 (883)
++.|++.++++.|++.|+++.++|..+. .....+.+.+|+... .+.. .....+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~~~-------- 97 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFC-PHHPADNC-------- 97 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEC-CCCCCCCC--------
Confidence 4789999999999999999999998762 455667778887421 0000 00000000
Q ss_pred HHHHhcCcEEEeChhhH--HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 502 ELIEEADGFAGVFPEHK--YEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 502 ~~~~~~~vfar~~Pe~K--~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
.. ..|+-+ ..+++.+.-..+.+.|+||...|..+-++|++-
T Consensus 98 --------~~-~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 98 --------SC-RKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred --------CC-CCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00 023211 122222322345699999999999999988774
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.49 Score=50.34 Aligned_cols=94 Identities=16% Similarity=0.215 Sum_probs=59.9
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHH--HHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAK--ETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEAD 508 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~--~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 508 (883)
|.+.-.+.+-|++++++++|+++|+++.++|.-....+. +..+++|+..+. ...+++.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~-~~~Ii~s------------------- 76 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADL-PEMIISS------------------- 76 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccc-cceEEcc-------------------
Confidence 555566788999999999999999999999996554433 455778875311 0111110
Q ss_pred cEEEeChhhHHHHHHHHhh---cCCEEEEEcCCcCCHHhhhhCC
Q 002768 509 GFAGVFPEHKYEIVKILQE---KKHVVGMTGDGVNDAPALKKAD 549 (883)
Q Consensus 509 vfar~~Pe~K~~iV~~lq~---~g~~V~m~GDGvNDapALk~Ad 549 (883)
. .....-+.+.+++ .+..+.|+||+.+|...+..++
T Consensus 77 ---~--~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 77 ---G--EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---H--HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 0 0001122222333 2467999999999999886553
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.14 Score=52.75 Aligned_cols=94 Identities=13% Similarity=0.089 Sum_probs=57.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++-||+.++++.|++.|+++.++|+-... ....-+.+|+... . ..++.+.+.. ...-.|+=
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~-f-d~i~~s~~~~----------------~~KP~~~~ 165 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEY-F-DFVVTSYEVG----------------AEKPDPKI 165 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHh-c-ceEEeecccC----------------CCCCCHHH
Confidence 57799999999999999999999976554 4666777887421 1 1111111100 01111211
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-CCHHhhhhCCe
Q 002768 518 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADI 550 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGv-NDapALk~AdV 550 (883)
=..+.+.+.-....+.|+||.. +|..+-++|++
T Consensus 166 ~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 166 FQEALERAGISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred HHHHHHHcCCChhHEEEECCCchHHHHHHHHcCC
Confidence 1122233322346799999997 89999888875
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.71 E-value=0.15 Score=57.22 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=59.4
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccC---------------cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHH
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGD---------------QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVD 501 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~ 501 (883)
-+|.|++.+++++|++.|+++.++|.= ....+..+.+..|+.-+ .++.+.... .+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd----~i~i~~~~~--sd---- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD----EVLICPHFP--ED---- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee----eEEEeCCcC--cc----
Confidence 367899999999999999999999982 13345566777776311 111110000 00
Q ss_pred HHHHhcCcEEEeChhhHHHHHHHHhh----cCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 502 ELIEEADGFAGVFPEHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 502 ~~~~~~~vfar~~Pe~K~~iV~~lq~----~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
+..+| .|+ -+++..+.+ ....+.|+||+.+|..+-+.|++-..
T Consensus 99 ------~~~~r-KP~--p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 ------NCSCR-KPK--TGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ------cCCCC-CCC--HHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 222 223322222 33679999999999999999887543
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.3 Score=52.63 Aligned_cols=86 Identities=15% Similarity=0.107 Sum_probs=57.7
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHH---HHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLA---IAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG 512 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~---tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar 512 (883)
..++-|++.+.++.+++.|+++.++|+-... .....-++.|++.... .. ++.|
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~-d~-----------------------lllr 171 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE-EH-----------------------LLLK 171 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc-ce-----------------------EEeC
Confidence 4567899999999999999999999997633 3345556678853211 11 1222
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhh
Q 002768 513 VFPEHKYEIVKILQEKKHVVGMTGDGVNDAPAL 545 (883)
Q Consensus 513 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapAL 545 (883)
-....|..-.+.+.+.-.+++|+||-.+|....
T Consensus 172 ~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~ 204 (266)
T TIGR01533 172 KDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDF 204 (266)
T ss_pred CCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhh
Confidence 112235555556656667799999999997543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.077 Score=51.93 Aligned_cols=90 Identities=21% Similarity=0.181 Sum_probs=56.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhH
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHK 518 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K 518 (883)
..+++.+.++.|++.|+++.++|+-....+....+.. +... . ..++.. + ++...-.|+-=
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f-~~i~~~-~----------------~~~~Kp~~~~~ 124 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-F-DLILGS-D----------------EFGAKPEPEIF 124 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-C-cEEEec-C----------------CCCCCcCHHHH
Confidence 4479999999999999999999999988888777765 3211 1 111111 0 00111112211
Q ss_pred HHHHHHHhhcCCEEEEEcCCcCCHHhhhhCC
Q 002768 519 YEIVKILQEKKHVVGMTGDGVNDAPALKKAD 549 (883)
Q Consensus 519 ~~iV~~lq~~g~~V~m~GDGvNDapALk~Ad 549 (883)
..+.+.+.-.. .+.|+||..+|..|-++|+
T Consensus 125 ~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 125 LAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 22223332234 7899999999999888764
|
HAD subfamilies caused by an overly broad single model. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.093 Score=51.39 Aligned_cols=92 Identities=17% Similarity=0.019 Sum_probs=64.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++||++.+.++.|+ .++++.+.|.=....+..+-+.+|+... +...++.+.+.. +.-|.
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~-~f~~i~~~~d~~------------------~~KP~- 103 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY-FGYRRLFRDECV------------------FVKGK- 103 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC-EeeeEEECcccc------------------ccCCe-
Confidence 57999999999999 5799999999999999999999987431 112222221111 11122
Q ss_pred HHHHHHHHh---hcCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 518 KYEIVKILQ---EKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 518 K~~iV~~lq---~~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
+.+.++ .....|.|+||..+|..|-++|.|-|.
T Consensus 104 ---~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 ---YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred ---EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 333343 345679999999999998887765554
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.13 Score=51.26 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=59.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccC---------------cHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHH
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGD---------------QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDE 502 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD---------------~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~ 502 (883)
++-|++.+++++|++.|+++.++|-- .......+.+.+|+. +. ..+.+..... +
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~---fd-~ii~~~~~~~--~----- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII---FD-DVLICPHFPD--D----- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc---ee-EEEECCCCCC--C-----
Confidence 46689999999999999999999974 234566777788874 11 1111100000 0
Q ss_pred HHHhcCcEEEeChhhHHHHHHHH-hh---cCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 503 LIEEADGFAGVFPEHKYEIVKIL-QE---KKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 503 ~~~~~~vfar~~Pe~K~~iV~~l-q~---~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
+ +....|. ..+++.+ ++ ....+.|+||+.+|..+-++|++-...
T Consensus 98 -----~-~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 -----N-CDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred -----C-CCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0 0001122 2222222 22 234589999999999999999886543
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.074 Score=44.81 Aligned_cols=27 Identities=22% Similarity=0.372 Sum_probs=25.3
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHH
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMA 28 (883)
Q Consensus 2 ~~~~~~~~l~~~~~~~~~~l~~aail~ 28 (883)
++++|+.|+++|++|+.++|++++++|
T Consensus 43 ~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 43 KKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp SSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 578999999999999999999999986
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.13 E-value=0.17 Score=54.01 Aligned_cols=66 Identities=21% Similarity=0.172 Sum_probs=47.9
Q ss_pred EeChhhHHHHHHHHhhc----CCEEEEEcCCcCCHHhhhhC--------CeeEEeccccHHHhhcccEeecCCChhHHHH
Q 002768 512 GVFPEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKA--------DIGIAVADATDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 512 r~~Pe~K~~iV~~lq~~----g~~V~m~GDGvNDapALk~A--------dVGIam~~gtd~ak~aADivL~~~~~~~i~~ 579 (883)
+..+.+|...++.+.++ +..+.|+||+.||.+|++.+ ..||+|+.|. .+..|++++. +...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g~--~~~~A~~~~~--~~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSGS--KKTVAKFHLT--GPQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecCC--cCCCceEeCC--CHHHHHH
Confidence 34456788888777653 34789999999999999999 5888886442 3567899884 4555554
Q ss_pred HH
Q 002768 580 AV 581 (883)
Q Consensus 580 ai 581 (883)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 44
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.28 Score=51.77 Aligned_cols=102 Identities=20% Similarity=0.156 Sum_probs=65.9
Q ss_pred CCCccHHHHHHHH--HhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCC-CCCCCCcccHHHHHHhcCcEEEeC
Q 002768 438 PPRHDSVDTIRRA--LNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGR-DKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 438 ~~R~~~~~~I~~l--~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
|+.|+.++.++.+ ++.|+.++++|-=|.---..+=+.-|+.... ..+.+.. ..+......+... ....+.++.
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f--~~I~TNpa~~~~~G~l~v~py--h~h~C~~C~ 146 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCF--SEIFTNPACFDADGRLRVRPY--HSHGCSLCP 146 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcccc--ceEEeCCceecCCceEEEeCc--cCCCCCcCC
Confidence 5678999999999 5689999999999988888888888885321 1111110 1111000000000 002244554
Q ss_pred h-hhHHHHHHHHhhc----C---CEEEEEcCCcCCHH
Q 002768 515 P-EHKYEIVKILQEK----K---HVVGMTGDGVNDAP 543 (883)
Q Consensus 515 P-e~K~~iV~~lq~~----g---~~V~m~GDGvNDap 543 (883)
| -=|..+++.+++. | ..|.++|||.||--
T Consensus 147 ~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~C 183 (234)
T PF06888_consen 147 PNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFC 183 (234)
T ss_pred CccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcC
Confidence 4 4799999999875 4 68999999999954
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=92.83 E-value=0.68 Score=58.09 Aligned_cols=37 Identities=11% Similarity=0.093 Sum_probs=31.5
Q ss_pred CCCccHHHHHHHH-HhCCCeEEEEccCcHHHHHHHHHH
Q 002768 438 PPRHDSVDTIRRA-LNLGVCVKMITGDQLAIAKETGRR 474 (883)
Q Consensus 438 ~~R~~~~~~I~~l-~~aGI~v~miTGD~~~tA~~ia~~ 474 (883)
.|-++..+++++| ++.|+.|.++||.+.......-..
T Consensus 616 ~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 616 SPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 5667999999997 788999999999999888776644
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=92.31 E-value=0.24 Score=51.75 Aligned_cols=98 Identities=14% Similarity=0.131 Sum_probs=57.7
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHH-HHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC--
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAK-ETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF-- 514 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~-~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~-- 514 (883)
++.||+.+.++.|++.|+++.++||-+..... ..-+..|+.. . -..++.+.+.+ +.+..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~-~-f~~i~~~~~~~----------------~~~~KP~ 139 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFS-L-MHHVVTGDDPE----------------VKQGKPA 139 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHh-h-CCEEEECChhh----------------ccCCCCC
Confidence 46799999999999999999999998764332 2222223321 0 01111111000 01111
Q ss_pred hhhHHHHHHHHh---hcCCEEEEEcCCcCCHHhhhhCCeeEE
Q 002768 515 PEHKYEIVKILQ---EKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 515 Pe~K~~iV~~lq---~~g~~V~m~GDGvNDapALk~AdVGIa 553 (883)
|+==...++.+. -..+.+.|+||...|+.|-++|++-..
T Consensus 140 p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 140 PDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred cHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 221123333332 223679999999999999999998654
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=91.94 E-value=0.39 Score=45.80 Aligned_cols=39 Identities=10% Similarity=0.068 Sum_probs=34.9
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccC-cHHHHHHHHHHcC
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGD-QLAIAKETGRRLG 476 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD-~~~tA~~ia~~lG 476 (883)
++.+++.+.++.|++.|+++.++|+- ....+..+-+..|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7887777777666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.64 E-value=1.3 Score=45.53 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=33.1
Q ss_pred cHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCC
Q 002768 442 DSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 442 ~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~ 478 (883)
.+.+.+.+|+++|+.|+.+|.-..+.-...-+.+|..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 4778999999999999999999888888888889885
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.37 E-value=5.8 Score=44.64 Aligned_cols=61 Identities=23% Similarity=0.236 Sum_probs=42.8
Q ss_pred hHHHHHHHHhhc-------CCEEEEEcCCcCCHHhhhhC-----CeeEEeccccHHHhhcccEeecCCChhHHHHHH
Q 002768 517 HKYEIVKILQEK-------KHVVGMTGDGVNDAPALKKA-----DIGIAVADATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 517 ~K~~iV~~lq~~-------g~~V~m~GDGvNDapALk~A-----dVGIam~~gtd~ak~aADivL~~~~~~~i~~ai 581 (883)
+|...|+.|.+. +..+.++||...|-.|++.. ++||-+|.... ..+|++.| ++-+.+...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG~~~k--~T~A~y~L--~dp~eV~~fL 355 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPK--DTDASYSL--QDPSEVMDFL 355 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEECCCCC--CCcceEeC--CCHHHHHHHH
Confidence 888888887652 33688999999999998865 47888874221 24688888 4455555444
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=91.27 E-value=0.86 Score=47.89 Aligned_cols=87 Identities=20% Similarity=0.274 Sum_probs=55.1
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHH---HHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKET---GRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~i---a~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
-|+-|++.+.++.+++.|++|+++||........+ =++.|.+. +..-.+.+.+-. ..-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~--~~~LiLR~~~d~-----------------~~~ 179 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTG--WKHLILRGLEDS-----------------NKT 179 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCC--cCeeeecCCCCC-----------------Cch
Confidence 47889999999999999999999999986542222 24456542 111122111000 000
Q ss_pred ChhhHHHHHHHHhhcCC-EEEEEcCCcCCH
Q 002768 514 FPEHKYEIVKILQEKKH-VVGMTGDGVNDA 542 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDa 542 (883)
.-+-|.+.=+.+.++|+ +++.+||-.+|.
T Consensus 180 ~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 180 VVTYKSEVRKSLMEEGYRIWGNIGDQWSDL 209 (229)
T ss_pred HhHHHHHHHHHHHhCCceEEEEECCChHHh
Confidence 11227777777777776 567799999995
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=90.82 E-value=0.9 Score=58.63 Aligned_cols=125 Identities=14% Similarity=0.167 Sum_probs=80.3
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh--h
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP--E 516 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P--e 516 (883)
+-||+.+.++.|+++|+++.++|+-....+..+-+++|+..... ..++.+.+ +.+..| +
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F-d~iv~~~~------------------~~~~KP~Pe 222 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF-DAIVSADA------------------FENLKPAPD 222 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC-CEEEECcc------------------cccCCCCHH
Confidence 56899999999999999999999999888888888899852111 11221111 111122 2
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCe-eEEeccc---cHHHhhcccEeecCCChhHHHHHHH
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADA---TDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdV-GIam~~g---td~ak~aADivL~~~~~~~i~~ai~ 582 (883)
-=.+..+.+.-..+.+.|+||..+|+.|-++|++ -|++..+ .+.....+|+++-+..--++...+.
T Consensus 223 ~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~ 292 (1057)
T PLN02919 223 IFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILT 292 (1057)
T ss_pred HHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHh
Confidence 2223344444445679999999999999999998 3444433 2334457888885432222444443
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=90.77 E-value=0.43 Score=50.09 Aligned_cols=99 Identities=13% Similarity=0.080 Sum_probs=63.5
Q ss_pred CCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcC---CCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEE
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLG---MATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG 512 (883)
Q Consensus 436 ~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lG---i~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar 512 (883)
.-++.+|+.+++++|++.|+++.++|..+....+.+-+..+ +.. ... ..+ + ..+...
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~-~f~-~~f-----d-------------~~~g~K 152 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTP-YFS-GYF-----D-------------TTVGLK 152 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhh-hcc-eEE-----E-------------eCcccC
Confidence 34689999999999999999999999988777666655542 210 000 000 0 000111
Q ss_pred eChhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 513 VFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 513 ~~Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
-.|+-=..+.+.+.-....+.|+||...|+.|-++|++-...
T Consensus 153 P~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred CCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 122222344444443446799999999999999999986544
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=90.08 E-value=0.88 Score=45.50 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=32.0
Q ss_pred CCccHHHHHHHHHhCCCeEEEEccCcH------------HHHHHHHHHcCCC
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQL------------AIAKETGRRLGMA 478 (883)
Q Consensus 439 ~R~~~~~~I~~l~~aGI~v~miTGD~~------------~tA~~ia~~lGi~ 478 (883)
+-||+.+++++|++.|+++.++|.-.. .....+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 348999999999999999999997543 2356677888874
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.22 E-value=0.33 Score=50.25 Aligned_cols=98 Identities=12% Similarity=-0.005 Sum_probs=56.0
Q ss_pred CCCCccHHHHHHHHHhCCCeEEEEccCcHHH--HHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeC
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAI--AKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 437 D~~R~~~~~~I~~l~~aGI~v~miTGD~~~t--A~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~ 514 (883)
-++.|++.+.++.|++.|+++.++|...... ........|+... . ..++.+.+. ....-.
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~----------------~~~KP~ 154 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMAL-F-DAVVESCLE----------------GLRKPD 154 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhh-C-CEEEEeeec----------------CCCCCC
Confidence 3578999999999999999999999875432 2222222333211 0 001100000 001111
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 515 Pe~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
|+-=..+.+.+.-....+.|+||...|..+=++|++-.
T Consensus 155 p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 155 PRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 22212233333333456889999999999999998843
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.64 E-value=0.73 Score=48.04 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=61.6
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+|+.++++.| ++++.++|+.....+...=++.|+.... +..++.+.+... ..-.|+-
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F-~~~v~~~~~~~~----------------~KP~p~~ 147 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYF-PDKLFSGYDIQR----------------WKPDPAL 147 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhC-cceEeeHHhcCC----------------CCCChHH
Confidence 4568999999988 4999999999988888877788875321 111222211110 0111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
=....+.+.-..+.|.|+||..+|..+=++|++....
T Consensus 148 ~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 148 MFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 2222333332345689999999999999999987753
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.34 E-value=0.98 Score=46.34 Aligned_cols=97 Identities=8% Similarity=-0.013 Sum_probs=57.0
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHH-HHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG-RRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia-~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe 516 (883)
++.|++.++++.|++.|+++.++|.-+.......- +..|+... . ..++...+.. ...-.|+
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~-f-d~v~~s~~~~----------------~~KP~p~ 145 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA-A-DHIYLSQDLG----------------MRKPEAR 145 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh-c-CEEEEecccC----------------CCCCCHH
Confidence 47899999999999999999999997765443321 21233211 0 0111111100 0011122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
==..+.+.+.-....+.|+||...|..+-++|++-.
T Consensus 146 ~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 146 IYQHVLQAEGFSAADAVFFDDNADNIEAANALGITS 181 (199)
T ss_pred HHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEE
Confidence 112333334334466899999999999999998854
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=87.54 E-value=1.6 Score=43.54 Aligned_cols=105 Identities=16% Similarity=0.198 Sum_probs=74.3
Q ss_pred HHhcCCeEeEEeeecccccccCCCCCCceEEeecCCCCCCCccHHHHHHHHHhCCCe--EEEEccC-------cHHHHHH
Q 002768 400 FAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVC--VKMITGD-------QLAIAKE 470 (883)
Q Consensus 400 ~a~~G~R~l~vA~~~~~~~~~~~~e~~l~~lG~i~l~D~~R~~~~~~I~~l~~aGI~--v~miTGD-------~~~tA~~ 470 (883)
+.+.|.|.+.+=.+. ++ ...=++.+-++..+.+++|++.+.. |.++|-- +...|..
T Consensus 36 Lk~~Gik~li~DkDN-------------TL--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~ 100 (168)
T PF09419_consen 36 LKKKGIKALIFDKDN-------------TL--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEA 100 (168)
T ss_pred hhhcCceEEEEcCCC-------------CC--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHH
Confidence 567788887775543 11 1234577889999999999999874 9999986 4788999
Q ss_pred HHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHHHHHhhc-----CCEEEEEcCCc-CCHHh
Q 002768 471 TGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEK-----KHVVGMTGDGV-NDAPA 544 (883)
Q Consensus 471 ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV~~lq~~-----g~~V~m~GDGv-NDapA 544 (883)
+.+.+|++. + .+..-.|.-..++.+.++.+ .+.++|+||-. -|.-+
T Consensus 101 ~~~~lgIpv-------l---------------------~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~ 152 (168)
T PF09419_consen 101 LEKALGIPV-------L---------------------RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLM 152 (168)
T ss_pred HHHhhCCcE-------E---------------------EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHH
Confidence 999999851 1 02223576666788887765 66799999975 45554
Q ss_pred hhh
Q 002768 545 LKK 547 (883)
Q Consensus 545 Lk~ 547 (883)
=..
T Consensus 153 gN~ 155 (168)
T PF09419_consen 153 GNR 155 (168)
T ss_pred hhc
Confidence 433
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=86.80 E-value=1.3 Score=49.20 Aligned_cols=48 Identities=17% Similarity=0.208 Sum_probs=38.0
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHH---HHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG---RRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 478 (883)
|.+.-.+.+=+++.++|++|++.|+++.++|+....+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444445666799999999999999999999999976666666 456763
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.86 E-value=4 Score=42.08 Aligned_cols=115 Identities=18% Similarity=0.199 Sum_probs=66.4
Q ss_pred CCCccHHHHHHHHHhCCC-eEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCC-CCCCCCcccHHHHHHhcCcEEEeCh
Q 002768 438 PPRHDSVDTIRRALNLGV-CVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGR-DKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI-~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~-~~~~~~~~~~~~~~~~~~vfar~~P 515 (883)
|.-|+..++|+.+++.|- .++++|--|.---.++-+..|+..- .. .+.+.. ..+......+... ....-|.++-|
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~-F~-~IfTNPa~~da~G~L~v~py-H~~hsC~~CPs 160 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL-FS-EIFTNPACVDASGRLLVRPY-HTQHSCNLCPS 160 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH-HH-HHhcCCcccCCCCcEEeecC-CCCCccCcCch
Confidence 567899999999999996 9999999987777777777776310 00 000000 0000000000000 00012333322
Q ss_pred h-hHHHHHHHHhhcC-------CEEEEEcCCcCC-HHhhhhCCeeEEec
Q 002768 516 E-HKYEIVKILQEKK-------HVVGMTGDGVND-APALKKADIGIAVA 555 (883)
Q Consensus 516 e-~K~~iV~~lq~~g-------~~V~m~GDGvND-apALk~AdVGIam~ 555 (883)
. =|..++..++..+ ..+..+|||.|| +|.++...--+||-
T Consensus 161 NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 161 NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 2 4777777776532 278899999999 57777665556664
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=84.61 E-value=2.1 Score=47.57 Aligned_cols=90 Identities=12% Similarity=0.068 Sum_probs=66.3
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHH----cCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRR----LGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~----lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
++.+++.++++.|++.|+.+.++|.-+...|..+-++ +|+.... .+...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f---------------------------~~~~~ 83 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF---------------------------DARSI 83 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe---------------------------eEEEE
Confidence 4578999999999999999999999999999998887 6664210 01122
Q ss_pred ChhhHHHHHHHHhh----cCCEEEEEcCCcCCHHhhhhCCeeEEe
Q 002768 514 FPEHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAV 554 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~----~g~~V~m~GDGvNDapALk~AdVGIam 554 (883)
.++-|-+.++.+-+ ....+.|+||...|..+.+++..++.+
T Consensus 84 ~~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 84 NWGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred ecCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 23345444443322 346799999999999999998887644
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=83.50 E-value=2.5 Score=44.66 Aligned_cols=88 Identities=23% Similarity=0.206 Sum_probs=54.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcH----HHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEe
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQL----AIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~----~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~ 513 (883)
|+=|++.+.++.+++.|++|..|||.+. .|.+++ ++.|.... ....+.+..... ...
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL-~~~G~~~~--~~l~lr~~~~~~----------------~~~ 175 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL-KKAGFPGW--DHLILRPDKDPS----------------KKS 175 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH-HHHTTSTB--SCGEEEEESSTS----------------S--
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH-HHcCCCcc--chhccccccccc----------------ccc
Confidence 4557899999999999999999999874 333333 55675421 111111100000 000
Q ss_pred ChhhHHHHHHHHhhcCC-EEEEEcCCcCCHHh
Q 002768 514 FPEHKYEIVKILQEKKH-VVGMTGDGVNDAPA 544 (883)
Q Consensus 514 ~Pe~K~~iV~~lq~~g~-~V~m~GDGvNDapA 544 (883)
..+-|...-+.++++|+ +++++||-.+|...
T Consensus 176 ~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 176 AVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp ----SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred ccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 12348888888888865 56779999999775
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=83.25 E-value=2.4 Score=43.30 Aligned_cols=97 Identities=15% Similarity=0.108 Sum_probs=55.5
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCC--CCCCcccCCCCCCCCcccHHHHHHhcCcEEEeCh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM--YPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~--~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~P 515 (883)
++.||+.+++++|++.+ +..++|.-+..+....-+.+|+..-. +-+.++ .++..+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~----------------------~~~~~~ 130 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVL----------------------MCGHDE 130 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEE----------------------EeccCc
Confidence 46899999999999975 56666764444443344556653110 001111 111111
Q ss_pred hhHHHHHH-HHhhcC-CEEEEEcCCcCCHHhhhhC--CeeEE-ecccc
Q 002768 516 EHKYEIVK-ILQEKK-HVVGMTGDGVNDAPALKKA--DIGIA-VADAT 558 (883)
Q Consensus 516 e~K~~iV~-~lq~~g-~~V~m~GDGvNDapALk~A--dVGIa-m~~gt 558 (883)
. |-+++. .+++.| ..+.|+||..+|..|-++| ++-.. +..|.
T Consensus 131 ~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 131 S-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred c-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 1 223332 333333 4578999999999999999 88543 33443
|
2 hypothetical protein; Provisional |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.75 E-value=2.1 Score=43.17 Aligned_cols=90 Identities=13% Similarity=0.133 Sum_probs=58.4
Q ss_pred HHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhhHHHHH
Q 002768 443 SVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIV 522 (883)
Q Consensus 443 ~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~K~~iV 522 (883)
..++++.|++. ++..++||.....+...-++.|+..- . ..++.+.+.. ..+-.|+-=....
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~-f-d~i~~~~~~~----------------~~KP~p~~~~~~~ 152 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRY-F-DAVVAADDVQ----------------HHKPAPDTFLRCA 152 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhH-c-eEEEehhhcc----------------CCCCChHHHHHHH
Confidence 46899999865 89999999999999999999998532 1 1122211110 1111122222333
Q ss_pred HHHhhcCCEEEEEcCCcCCHHhhhhCCee
Q 002768 523 KILQEKKHVVGMTGDGVNDAPALKKADIG 551 (883)
Q Consensus 523 ~~lq~~g~~V~m~GDGvNDapALk~AdVG 551 (883)
+.++-....+.|+||..+|+.+=++|++-
T Consensus 153 ~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 153 QLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 33433345588999999999999999874
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=82.58 E-value=1.3 Score=44.62 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=61.4
Q ss_pred CCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHHHHcCCCCCCCCCCcccCCCCCCCCcccHHHHHHhcCcEEEeChhh
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia~~lGi~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~vfar~~Pe~ 517 (883)
++.+++.+++++|+ .++.++|.-....+...-+++|+... .+ .++.+.+.... ...+.-.|+-
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~-fd-~i~~~~~~~~~------------~~~~KP~p~~ 146 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDC-FD-GIFCFDTANPD------------YLLPKPSPQA 146 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhh-hC-eEEEeecccCc------------cCCCCCCHHH
Confidence 36789999999998 47999999888888899899998531 11 11111110000 0000111222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHhhhhCCeeE
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 518 K~~iV~~lq~~g~~V~m~GDGvNDapALk~AdVGI 552 (883)
=..+++.+......+.|+||...|..+=++|++-.
T Consensus 147 ~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 147 YEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 23344444445677899999999999988887653
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=81.13 E-value=23 Score=45.57 Aligned_cols=200 Identities=14% Similarity=0.131 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-----C-eeEE----EECCeEEEEEccCcCCCcEEEEeCCCeecc
Q 002768 43 DFVGIVCLLLINSTISFIEENNAGNAAAALMAHLA-----P-KTKV----LREGQWKEQDAAVLVPGDIISIKLGDIIPA 112 (883)
Q Consensus 43 ~~~~i~~~~li~~~i~~~~e~~a~~~~~~L~~~~~-----~-~~~V----~Rdg~~~~i~~~~Lv~GDiv~l~~Gd~VPa 112 (883)
-.+++++.++++...++.++++.++..+...+... . ...+ +.-|....+...|.+|.|.+.++ |+..=+
T Consensus 134 il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~-g~~l~V 212 (941)
T TIGR01517 134 ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFIS-GLSLEI 212 (941)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEE-cCcEEE
Confidence 34555666677777788887776665443433211 1 1122 23588889999999999999886 444446
Q ss_pred cEEEEeeCCeeEeccccccCCccccccccCCCeeeeeeeEeeCceEEEEEEccchhhhhhHhhhhccccccChHHHHHHH
Q 002768 113 DARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTS 192 (883)
Q Consensus 113 D~~ll~g~~l~Vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~ 192 (883)
|=-.+.|++.-++- . .|+..- -..|..+..|+...-=...|.=+.-|.=... +...-.++.-...+.+..+.
T Consensus 213 dES~LTGES~pv~K--~--~~~~n~--v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~--~~~~~~~t~l~~~~~~~~~~ 284 (941)
T TIGR01517 213 DESSITGESDPIKK--G--APKDSF--LLSGTVVNEGSGRMLVTAVGVNSFGGKLMME--LRAEGEDTPLQEKLSELAGL 284 (941)
T ss_pred EecccCCCCCcccc--c--CCCCce--EEeCCeEEeeEEEEEEEEeCCCcHHHHHHHh--hccCCCCCcHHHHHHHHHHH
Confidence 66666777644433 1 133211 2457777777643211111222222221110 11101122222334444444
Q ss_pred HHHHHHH---HHHHHHHHHHHhH------------hhcccCchHHHHHHHHHHHHhhcCchhhHHHHHHHHHhH
Q 002768 193 IGNFCIC---SIAVGMILEIIVM------------FPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGS 251 (883)
Q Consensus 193 i~~~~~~---~i~i~~~~~~~~~------------~~~~~~~~~~~~~~~l~llv~~iP~aLp~~~~~~l~~~~ 251 (883)
+..+.+. .+++..++..+.. .......+..++..+++..-.++|.+++++++.+....+
T Consensus 285 ~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti~l~~~~~~ma 358 (941)
T TIGR01517 285 IGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYSMKKMM 358 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHHHHHHHHHHHH
Confidence 4433221 1111111111110 001123455667777788888899999999888876544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=80.63 E-value=10 Score=40.47 Aligned_cols=48 Identities=6% Similarity=-0.029 Sum_probs=38.3
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEcc---CcHHHHHHHHHHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITG---DQLAIAKETGRRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTG---D~~~tA~~ia~~lGi~ 478 (883)
|.+.-.+.+=+++.++|++|++.|+++.++|| .......+.-+++|+.
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~ 60 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIP 60 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 44444566667999999999999999999997 5577777777788874
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=80.51 E-value=1.2 Score=40.57 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=35.5
Q ss_pred eecCCCCCCCccHHHHHHHHHhCCCeEEEEccCcHHHHHHHH---HHcCCC
Q 002768 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETG---RRLGMA 478 (883)
Q Consensus 431 G~i~l~D~~R~~~~~~I~~l~~aGI~v~miTGD~~~tA~~ia---~~lGi~ 478 (883)
|.+...+.+=|++.++|+.|+++|++++++|-....+...++ +.+|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 555667788899999999999999999999998754433333 566764
|
... |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 883 | ||||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 0.0 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-110 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 7e-35 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 1e-34 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 3e-34 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 5e-34 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-20 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-20 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-20 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 7e-20 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 2e-11 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 5e-11 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 2e-08 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 3e-08 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 5e-05 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 4e-08 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 3e-04 | ||
| 2o98_P | 52 | Structure Of The 14-3-3 H+-Atpase Plant Complex Len | 7e-04 |
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2O98|P Chain P, Structure Of The 14-3-3 H+-Atpase Plant Complex Length = 52 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 883 | |||
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-122 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-120 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 5e-54 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 3e-50 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-44 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 8e-43 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 2e-40 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-31 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 9e-30 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 4e-29 | |
| 2o98_P | 52 | H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, | 6e-19 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-16 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 3e-15 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 7e-14 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-12 | |
| 3m50_P | 31 | N.plumbaginifolia H+-translocating ATPase mRNA; al | 3e-09 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 9e-06 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 2e-05 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 3e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 4e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 6e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 6e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 7e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 8e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 8e-05 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 1e-04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 5e-04 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-04 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 5e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 7e-04 |
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 1106 bits (2864), Expect = 0.0
Identities = 648/832 (77%), Positives = 725/832 (87%), Gaps = 14/832 (1%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+E+K LKFL FMWNPLSWVME AA+MAI LANG G+ PDWQDFVGI+CLL+INSTISFIE
Sbjct: 54 KESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIE 113
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
ENNAGNAAAALMA LAPKTKVLR+G+W EQ+AA+LVPGDI+SIKLGDIIPADARLLEGDP
Sbjct: 114 ENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP 173
Query: 122 LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDSTE 181
LK+DQ SALTGESLPVTK EVFSGSTCK GEIEAVVIATGVH+FFGKAAHLVDST
Sbjct: 174 LKVDQ--SALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTN 231
Query: 182 VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPT 241
VGHFQ+VLT+IGNFCICSIA+GM++EIIVM+PIQ R YRDGI+NLLVLLIGGIPIAMPT
Sbjct: 232 QVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPIQRRKYRDGIDNLLVLLIGGIPIAMPT 291
Query: 242 VLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNR 301
VLSVT+AIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN+L+VD+NL+EVF +
Sbjct: 292 VLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCK 351
Query: 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITY 361
++KD ++L AA A+R+ENQDAIDAA++ MLADPKEARA I+EVHFLPFNPVDKRTA+TY
Sbjct: 352 GVEKDQVLLFAAMASRVENQDAIDAAMVGMLADPKEARAGIREVHFLPFNPVDKRTALTY 411
Query: 362 IDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKE 421
ID GNW+R SKGAPEQIL L K +++ KV +IIDK+AERGLRSLAVA Q V E TKE
Sbjct: 412 IDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKE 471
Query: 422 SPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNM 481
SPG PW F GLLPLFDPPRHDS +TIRRALNLGV VKMITGDQLAI KETGRRLGM TNM
Sbjct: 472 SPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNM 531
Query: 482 YPSSSLLGRDKDENEA-LPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVN 540
YPSS+LLG KD N A +PV+ELIE+ADGFAGVFPEHKYEIVK LQE+KH+VGMTGDGVN
Sbjct: 532 YPSSALLGTHKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVN 591
Query: 541 DAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYT----- 595
DAPALKKADIGIAVADATDAARGA+DIVLTEPGLSVIISAVLTSRAIFQRMKNYT
Sbjct: 592 DAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVS 651
Query: 596 ------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFA 649
GF+L+ALIWE+DF FMVLIIAILNDGTIMTISKDRVKPSP PDSWKL EIFA
Sbjct: 652 ITIRIVFGFMLIALIWEFDFSAFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLKEIFA 711
Query: 650 TGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQALIFV 709
TG+V+G Y A++TV+F+W TDFF F V+S+ N+ E+ A+YLQVSIISQALIFV
Sbjct: 712 TGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFV 771
Query: 710 TRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAGVIWLYSFVFY 769
TRS+SWSF+ERPGALLM AF++AQL+ATLIAVYA+ FA I G+GWGWAGVIWLYS V Y
Sbjct: 772 TRSRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTY 831
Query: 770 IPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQWILSHRSLQ 821
PLDV KF +RY LSG+AW +F+ KTAFT KKDYGKE+R AQW+
Sbjct: 832 FPLDVFKFAIRYILSGKAWLNLFENKTAFTMKKDYGKEEREAQWMRGSHHHH 883
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 1009 bits (2612), Expect = 0.0
Identities = 288/834 (34%), Positives = 439/834 (52%), Gaps = 55/834 (6%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGGQGPDWQDFVGIVCLLLINSTISFIE 61
+EN FLKFL F P+ +VME AAV+A L DW DF I LLL+N+ + F++
Sbjct: 109 KENHFLKFLGFFVGPIQFVMEGAAVLAAGL-------EDWVDFGVICGLLLLNAVVGFVQ 161
Query: 62 ENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDP 121
E AG+ L LA K VLR+G KE +A +VPGDI+ ++ G IIPAD R++ D
Sbjct: 162 EFQAGSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA 221
Query: 122 -LKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVDST 180
L++DQ SALTGESL V K D+VF+ S K GE V+ ATG ++F G+AA LV++
Sbjct: 222 FLQVDQ--SALTGESLAVDKHKGDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAA 279
Query: 181 E-VVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAM 239
GHF +VL IG + + +++ + F + + L + I G+P+ +
Sbjct: 280 SGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF-YRSNPIVQILEFTLAITIIGVPVGL 338
Query: 240 PTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVF 299
P V++ T+A+G+ L+++ AI ++++AIE +AG+++LCSDKTGTLT N+L++
Sbjct: 339 PAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYT--- 395
Query: 300 NRNMDKDMIVLLAARAARLENQ--DAIDAAIINMLADPKEARANIKE---VHFLPFNPVD 354
+D + ++L A AA + + DAID A + L A++ + + + F PF+PV
Sbjct: 396 VAGVDPEDLMLTACLAASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVS 455
Query: 355 KRTAITYIDSDGNWYRASKGAPEQILNLCKEKK----EIAVKVHTIIDKFAERGLRSLAV 410
K+ G KGAP +L +E E+ + +FA RG RSL V
Sbjct: 456 KKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGV 515
Query: 411 AIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKE 470
A + G W G++P DPPRHD+ T+ A LG+ +KM+TGD + IA+E
Sbjct: 516 ARKRG--------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARE 567
Query: 471 TGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKH 530
T R+LG+ TN+Y + L + V + +E ADGFA VFP+HKY +V+ILQ++ +
Sbjct: 568 TSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGY 627
Query: 531 VVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQR 590
+V MTGDGVNDAP+LKKAD GIAV ++DAAR AADIV PGL II A+ TSR IF R
Sbjct: 628 LVAMTGDGVNDAPSLKKADTGIAVEGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHR 687
Query: 591 MKNYT-----------LGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPRP 639
M Y + L I +V+ IAI D + I+ D S P
Sbjct: 688 MYAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFIAIFADVATLAIAYDNAPYSQTP 747
Query: 640 DSWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQV 699
W L +++ +++G LA+ T + + + N + L+LQ+
Sbjct: 748 VKWNLPKLWGMSVLLGVVLAVGTWITVTTMY------AQGENGGIVQNFGNMDEVLFLQI 801
Query: 700 SIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVGWGWAG 759
S+ LIF+TR+ + P L A + ++AT ++ + S
Sbjct: 802 SLTENWLIFITRANGPFWSSIPSWQLSGAIFLVDILATCFTIWG---WFEHSDTSIVAVV 858
Query: 760 VIWLYSFVFYIPLDVIKFIVRYALSGEAWNLVFDRKTAFTSKKDYGKEDRAAQW 813
IW++SF + + + +I++ ++ ++ + K+ ++K ED
Sbjct: 859 RIWIFSFGIFCIMGGVYYILQDSV---GFDNLMHGKSPKGNQKQRSLEDFVVSL 909
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 393 bits (1013), Expect = e-122
Identities = 199/932 (21%), Positives = 343/932 (36%), Gaps = 164/932 (17%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVL------ANGGGQGPDWQDFVGIVCLLLINS 55
+++KF + L +M AA + ++ + + ++ ++++
Sbjct: 95 GTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTG 154
Query: 56 TISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADAR 115
+ +E + N A+ + + V+R+G + +A LV GD++ +K GD +PAD R
Sbjct: 155 CFGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIR 214
Query: 116 LLEGDPLKIDQASSALTGESLPVTKKTA--DE--------VFSGSTCKHGEIEAVVIATG 165
+L+ K+D S+LTGES P T+ E F + C G + +V+ TG
Sbjct: 215 ILQAQGRKVDN--SSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTG 272
Query: 166 VHSFFGKAAHLVDSTEV--------VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQH 217
+ G+ A L E + HF ++ + +I G I+ M
Sbjct: 273 DRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGL------AILFGATFFIVAMC--IG 324
Query: 218 RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 277
++ + + +++ +P + ++V L++ + RL+ + + K + A+E + V+C
Sbjct: 325 YTFLRAMVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVIC 384
Query: 278 SDKTGTLTLNRLTV-----DRNLIEV----------FNRNMDKDMIVLLAA----RAARL 318
SDKTGTLT NR+TV D ++ F+++ + + RAA
Sbjct: 385 SDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFK 444
Query: 319 ENQ------------DAIDAAIINM----LADPKEARANIKEVHFLPFNPVDKR--TAIT 360
Q DA + A++ L + R +V +PFN +K + T
Sbjct: 445 SGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHT 504
Query: 361 YIDSDGNWYRA-SKGAPEQILNLCK-------------EKKEIAVKVHTIIDKFAERGLR 406
D + KGAPE++L C + +E T G R
Sbjct: 505 LEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWRE---AFQTAYLSLGGLGER 561
Query: 407 SLAVAIQEVSEM-----------TKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV 455
L +SE P +F GL+ + DPPR D + + G+
Sbjct: 562 VLGFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGI 621
Query: 456 CVKMITGDQ----LAIAKETG--------RRLGMATNMYPSSSLLGRDK-------DENE 496
V M+TGD AIA G A P + +D + +
Sbjct: 622 RVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681
Query: 497 ALPVDELIEEADG-----FAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551
+ EL+E FA P+ K IV+ Q +V +TGDGVND+PALKKADIG
Sbjct: 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIG 741
Query: 552 IAVADA-TDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKN---YTLGF-------VL 600
+A+ A +DAA+ AAD++L + + I++ V R IF +K YTL L
Sbjct: 742 VAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYL 801
Query: 601 LALIWEYDFP--PFMVLIIAILNDGT-------------IMTISKDRVKPSPRPDSWKLN 645
+ + P +L I + D IM + R R + L
Sbjct: 802 IYITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMH-LRPRNPKRDRLVNEPL- 859
Query: 646 EIFATGIVIGTYLALVTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIISQA 705
+ IG + Y+ + + + V L
Sbjct: 860 -AAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQD------SY 912
Query: 706 LIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYAHISFAYISGVG--WGWAGVIW- 762
T Q + + + Q+ LI +S +++
Sbjct: 913 GQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQ 972
Query: 763 --LYSFVFYIPLDVIKFIVRYALSGEAWNLVF 792
+ F+ Y P F + + W +
Sbjct: 973 VCIGCFLCYCPGMPNIFNFM-PIRFQWWLVPM 1003
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 389 bits (1002), Expect = e-120
Identities = 189/940 (20%), Positives = 359/940 (38%), Gaps = 175/940 (18%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVL------ANGGGQGPDWQDFVGIVCLLLINS 55
+++KF ++ S ++ A++ + + V + ++++
Sbjct: 90 TTPEWIKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTG 149
Query: 56 TISFIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADAR 115
S+ +E + + + + V+R+G+ +A +V GD++ +K GD IPAD R
Sbjct: 150 CFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLR 209
Query: 116 LLEGDPLKIDQASSALTGESLPVTKKTADE----------VFSGSTCKHGEIEAVVIATG 165
++ K+D S+LTGES P T+ F + C G VV+ TG
Sbjct: 210 IISAHGCKVDN--SSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTG 267
Query: 166 VHSFFGKAAHLVDSTEV--------VGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQH 217
+ G+ A L EV + HF ++T + ++ +G+ I+ +
Sbjct: 268 DRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGV------AVFLGVSFFILSLI--LG 319
Query: 218 RSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLC 277
S+ + + L+ +++ +P + ++V L + + R++++ + K + A+E + +C
Sbjct: 320 YSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTIC 379
Query: 278 SDKTGTLTLNRLTV-----DRNLIEV----------FNRNMDKDMIVLLAAR---AARLE 319
SDKTGTLT NR+TV D + E F++ + A A +
Sbjct: 380 SDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRAVFQ 439
Query: 320 NQ-------------DAIDAAIINM----LADPKEARANIKEVHFLPFNPVDKR--TAIT 360
DA ++A++ + R ++ +PFN +K +
Sbjct: 440 AGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHE 499
Query: 361 YIDSDGNWYRA-SKGAPEQILNLCK-------------EKKEIAVKVHTIIDKFAERGLR 406
S + Y KGAPE+IL+ C + KE + G R
Sbjct: 500 NEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKE---AFQNAYLELGGLGER 556
Query: 407 SLAVAIQEVSEM-----------TKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV 455
L + E P F GL+ + DPPR D + + + G+
Sbjct: 557 VLGFCHFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGI 616
Query: 456 CVKMITGDQ----LAIAKETG--------RRLGMATNMYPSSSLLGRDK-------DENE 496
V M+TGD AIAK G A P + RD + +
Sbjct: 617 KVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLK 676
Query: 497 ALPVDELIEEADG-----FAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG 551
L + L + FA P+ K IV+ Q + +V +TGDGVND+PALKKADIG
Sbjct: 677 DLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIG 736
Query: 552 IAVADA-TDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKN---YTLGF-------VL 600
+A+ + +D ++ AAD++L + + I++ V R IF +K YTL L
Sbjct: 737 VAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 796
Query: 601 LALIWEYDFP--PFMVLIIAILNDGT-IMTISKDRVKP-----SPR-PDSWKLNEIFATG 651
+ +I P +L I + D ++++ ++ + PR P + KL
Sbjct: 797 VFIIGNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLIS 856
Query: 652 IVIGTYLALVTVL----FYWVVVDTDFFET----------------------HFHVKSLS 685
+ G + + ++ ++ + F
Sbjct: 857 MAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQR 916
Query: 686 SNSEEVSSALYLQVSIISQ-ALIFVTRSQSWSFLERP-GALLMCAFVVAQLVATLIAVYA 743
E + ++ Q A + + +++ S ++ ++ + + Y
Sbjct: 917 KIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYC 976
Query: 744 ---HISFAYISGVGWGWAGVIWLYSFVFYIPLDVIKFIVR 780
++ + + W + YS + ++ ++ +FI+R
Sbjct: 977 PGTDVALR-MYPLKPSWWFCAFPYSLIIFLYDEMRRFIIR 1015
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 202 bits (516), Expect = 5e-54
Identities = 92/320 (28%), Positives = 153/320 (47%), Gaps = 36/320 (11%)
Query: 6 FLKFLSFMWNPLSWVMEAAAVMAIVLA---NGGGQGPDWQDFVGIVCLLLINSTISFIEE 62
+ + + L ++ AA ++ VLA G + + I+ +L+ N+ + +E
Sbjct: 51 WELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQE 110
Query: 63 NNAGNAAAALMAHLAPKTKVLREGQWKEQ--DAAVLVPGDIISIKLGDIIPADARLL--E 118
NA NA AL + KV R + Q A +VPGDI+ + +GD +PAD R+L +
Sbjct: 111 RNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK 170
Query: 119 GDPLKIDQASSALTGESLPVTKKTA---DE----------VFSGSTCKHGEIEAVVIATG 165
L++DQ S LTGES+ V K T D +FSG+ G+ +V TG
Sbjct: 171 STTLRVDQ--SILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTG 228
Query: 166 VHSFFGKAAHLVDSTEVV--------GHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQH 217
V + GK + +TE F + L+ IC +AV +I P+
Sbjct: 229 VSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLS-KVISLIC-VAVWLINIGHFNDPVHG 286
Query: 218 RSYRDGINNLLVLLIG----GIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGM 273
S+ G + + IP +P V++ LA+G+ R++++ AI + + ++E +
Sbjct: 287 GSWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCT 346
Query: 274 DVLCSDKTGTLTLNRLTVDR 293
V+CSDKTGTLT N+++V +
Sbjct: 347 SVICSDKTGTLTTNQMSVCK 366
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 191 bits (487), Expect = 3e-50
Identities = 123/562 (21%), Positives = 199/562 (35%), Gaps = 106/562 (18%)
Query: 308 IVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGN 367
+ L + + + + A R +K+ L F+ K ++ + +
Sbjct: 446 LTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSS 505
Query: 368 WYRAS-----KGAPEQILNLC--------------KEKKEIAVKVHTIIDKFAERGLRSL 408
KGAPE +++ C K++I + LR L
Sbjct: 506 RAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEW--GTGRDTLRCL 563
Query: 409 AVAIQEV----SEMTKESPGGPW------TFCGLLPLFDPPRHDSVDTIRRALNLGVCVK 458
A+A ++ EM + TF G++ + DPPR + + +I+ + G+ V
Sbjct: 564 ALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVI 623
Query: 459 MITGDQLAIAKETGRRLGMATNMYPSS--SLLGRDKDENEALPVDELIEEADG---FAGV 513
MITGD A RR+G+ + + GR E + LP+ E E FA V
Sbjct: 624 MITGDNKGTAIAICRRIGIFGENEEVADRAYTGR---EFDDLPLAEQREACRRACCFARV 680
Query: 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG 573
P HK +IV+ LQ + MTGDGVNDAPALKKA+IGIA+ T A+ A+++VL +
Sbjct: 681 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDN 740
Query: 574 LSVIISAVLTSRAIFQRMKN---YTLG---------FVLLALIWEYDFPPFMVLIIAILN 621
S I++AV RAI+ MK Y + F+ AL P +L + ++
Sbjct: 741 FSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVT 800
Query: 622 DGT-------------IMTISKDRVKPSPRP------DSWKLNEIFATGIVIG--TYLAL 660
DG IM +P PR W A G +G T A
Sbjct: 801 DGLPATALGFNPPDLDIMD------RP-PRSPKEPLISGWLFFRYMAIGGYVGAATVGAA 853
Query: 661 VTVLFYWVVVDTDFFETHFHVKSLSSNSEEVSSALYLQVSIIS-QALIFVT--------- 710
Y + H + + +
Sbjct: 854 AWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNA 913
Query: 711 ---RSQSWSFLERP--------GALLMCAFVVAQLVATLIAVYAHI-SFAYISGVGWGWA 758
S++ S + P G++ + + + + I + W
Sbjct: 914 LNSLSENQSLMRMPPWVNIWLLGSICLS--MSLHFLILYVDPLPMIFKLKALDLTQWLM- 970
Query: 759 GVIWLYSFVFYIPLDVIKFIVR 780
+ S +++KFI R
Sbjct: 971 --VLKISLPVIGLDEILKFIAR 990
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 4e-44
Identities = 138/551 (25%), Positives = 218/551 (39%), Gaps = 122/551 (22%)
Query: 64 NAGNAAAALMAHLAPKT-KVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
G A L+ L KT V+R+G+ + GDI+ ++ G+ IP D ++EG+
Sbjct: 197 RTGEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY 255
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFG----------- 171
+D+ S ++GE +PV K DEVF + G + + AT V G
Sbjct: 256 -VDE--SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV----GGETLLAQIVKL 306
Query: 172 -------KA--AHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRD 222
K L D +VV +F + T + +A I I + I H
Sbjct: 307 VEDAMGSKPPIQRLAD--KVVAYF--IPTVLL------VA---ISAFIYWYFIAHAPLLF 353
Query: 223 GINNLLVLLIGGIPIAM----PTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 278
L+ +L+ P A PT L+V G + ++ G + K A+E + +
Sbjct: 354 AFTTLIAVLVVACPCAFGLATPTALTV----GMGKGAELGILIKNADALEVAEKVTAVIF 409
Query: 279 DKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDA--IDAAIINMLADPK 336
DKTGTLT + V ++ N D+ ++ LAA E + I AI+ K
Sbjct: 410 DKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI---AERRSEHPIAEAIV------K 456
Query: 337 EARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKK-EIAVKVHT 395
+A H + +K I + G L ++ ++ +V
Sbjct: 457 KALE-----HGIELGEPEKVEVIAGEGVVADGILV--GNK----RLMEDFGVAVSNEVEL 505
Query: 396 IIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV 455
++K ++ VA G++ + D + + ++ +G+
Sbjct: 506 ALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGI 552
Query: 456 CVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515
V MITGD A+ R L +D +I A V P
Sbjct: 553 KVGMITGDNWRSAEAISRELN-----------------------LDLVI------AEVLP 583
Query: 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLS 575
K E VK LQ K+ VV GDG+NDAPAL +AD+GIAV +D A + DIVL L
Sbjct: 584 HQKSEEVKKLQAKE-VVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLR 642
Query: 576 VIISAVLTSRA 586
+++A+ SR
Sbjct: 643 DVVAAIQLSRK 653
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 164 bits (419), Expect = 8e-43
Identities = 138/557 (24%), Positives = 222/557 (39%), Gaps = 122/557 (21%)
Query: 64 NAGNAAAALMAHLAPKT-KVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPL 122
G A L+ L KT V+R+G+ + GDI+ ++ G+ IP D ++EG+
Sbjct: 119 RTGEAIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES- 176
Query: 123 KIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFG----------- 171
+D+ S ++GE +PV K DEVF + G + + AT V G
Sbjct: 177 YVDE--SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV----GGETLLAQIVKL 228
Query: 172 -------KA--AHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRD 222
K L D +VV +F + T + +A I I + I H
Sbjct: 229 VEDAMGSKPPIQRLAD--KVVAYF--IPTVLL------VA---ISAFIYWYFIAHAPLLF 275
Query: 223 GINNLLVLLIGGIPIAM----PTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCS 278
L+ +L+ P A PT ++T+ +G + ++ G + K A+E + +
Sbjct: 276 AFTTLIAVLVVACPCAFGLATPT--ALTVGMG--KGAELGILIKNADALEVAEKVTAVIF 331
Query: 279 DKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQDA--IDAAIINMLADPK 336
DKTGTLT + V ++ N D+ ++ LAA E + I AI+ K
Sbjct: 332 DKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI---AERRSEHPIAEAIV------K 378
Query: 337 EARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKK-EIAVKVHT 395
+A H + +K I + G L ++ ++ +V
Sbjct: 379 KALE-----HGIELGEPEKVEVIAGEGVVADGILV--GNK----RLMEDFGVAVSNEVEL 427
Query: 396 IIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGV 455
++K ++ VA G++ + D + + ++ +G+
Sbjct: 428 ALEKLEREAKTAVIVARNG-------------RVEGIIAVSDTLKESAKPAVQELKRMGI 474
Query: 456 CVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515
V MITGD A+ R L +D +I A V P
Sbjct: 475 KVGMITGDNWRSAEAISRELN-----------------------LDLVI------AEVLP 505
Query: 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLS 575
K E VK LQ K VV GDG+NDAPAL +AD+GIAV +D A + DIVL L
Sbjct: 506 HQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLR 564
Query: 576 VIISAVLTSRAIFQRMK 592
+++A+ SR ++K
Sbjct: 565 DVVAAIQLSRKTMSKIK 581
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 2e-40
Identities = 139/563 (24%), Positives = 219/563 (38%), Gaps = 133/563 (23%)
Query: 66 GNAAAALMAHLAPKT--KVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLK 123
G+A AL+ L P++ ++ +G +E + GD++ ++ G+ IP D + EG
Sbjct: 213 GSAIRALLK-LVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF- 270
Query: 124 IDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFG------------ 171
+D+ S +TGE +PV K+ + +V + + G V+ A V G
Sbjct: 271 VDE--SMVTGEPIPVAKEASAKVIGATINQTGSF--VMKALHV----GSDTMLARIVQMV 322
Query: 172 ------KA--AHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIV-MFPIQHRSYRD 222
+A L D V G F V I +A +L IV +
Sbjct: 323 SDAQRSRAPIQRLAD--TVSGWF--VPAVIL------VA---VLSFIVWALLGPQPALSY 369
Query: 223 GINNLLVLLIGGIPIAMP------TVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVL 276
G+ + +LI IA P T +S+ + +G + +Q G + K A+E M ++ L
Sbjct: 370 GLIAAVSVLI----IACPCALGLATPMSIMVGVG--KGAQSGVLIKNAEALERMEKVNTL 423
Query: 277 CSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQD--AIDAAIINMLAD 334
DKTGTLT + + + +D + LA A LE+Q + AI+
Sbjct: 424 VVDKTGTLTEGHPKL----TRIVTDDFVEDNALALA---AALEHQSEHPLANAIV----- 471
Query: 335 PKEARANIKEVHFLPFNPVDKRTAIT----YIDSDGNWYRASKGAPEQILNLCKEKKEIA 390
A+ L V+ A T DG+ G L +E
Sbjct: 472 -HAAKE-----KGLSLGSVEAFEAPTGKGVVGQVDGHHVAI--GNAR----LMQEHGGDN 519
Query: 391 VKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRA 450
+ D+ +G + +A+ LL + DP + + +TI
Sbjct: 520 APLFEKADELRGKGASVMFMAVDG-------------KTVALLVVEDPIKSSTPETILEL 566
Query: 451 LNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGF 510
G+ + M+TGD A+ LG + +++
Sbjct: 567 QQSGIEIVMLTGDSKRTAEAVAGTLG-----------------------IKKVV------ 597
Query: 511 AGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLT 570
A + PE K IV L++K +V M GDGVNDAPAL KADIGIA+ TD A +A + L
Sbjct: 598 AEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIESAGVTLL 657
Query: 571 EPGLSVIISAVLTSRAIFQRMKN 593
L I A S + M N
Sbjct: 658 HGDLRGIAKARRLSEST---MSN 677
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 2e-31
Identities = 85/334 (25%), Positives = 132/334 (39%), Gaps = 70/334 (20%)
Query: 262 KRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAARLENQ 321
+ A E + + DKTGTLT R V ++ N +D ++ +AA LE +
Sbjct: 2 RDRQAFERAKDLQAVIFDKTGTLTEGRFGV----TDIVGFNHSEDELLQIAAS---LEAR 54
Query: 322 DA--IDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRAS-KGAPEQ 378
I AAI+ +EA V++ AI G G
Sbjct: 55 SEHPIAAAIV------EEAEK-----RGFGLTEVEEFRAIP-----GKGVEGIVNGRRYM 98
Query: 379 ILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDP 438
+++ +E+ +K ++K ++G + + G++ L D
Sbjct: 99 VVSP-GYIRELGIKTDESVEKLKQQGKTVVFILKNG-------------EVSGVIALADR 144
Query: 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEAL 498
R +S + I + +G+ M+TGD +AK LG
Sbjct: 145 IRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG---------------------- 182
Query: 499 PVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADAT 558
+D+ A V P K E VK +Q+ K+V M GDGVNDAPAL +AD+GIA+ T
Sbjct: 183 -LDDYF------AEVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPALAQADVGIAIGAGT 234
Query: 559 DAARGAADIVLTEPGLSVIISAVLTSRAIFQRMK 592
D A ADIVL + + V SR + +
Sbjct: 235 DVAVETADIVLVRNDPRDVAAIVELSRKTYSKFH 268
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 9e-30
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 29/162 (17%)
Query: 431 GLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGR 490
+ D PR + D + + N G+ + +++GD+ KE + L
Sbjct: 129 ASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELN-------------- 174
Query: 491 DKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI 550
+ E + + PE K I++ L++ + V M GDGVNDA AL AD+
Sbjct: 175 ---------IQEYY------SNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADV 219
Query: 551 GIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMK 592
+A+ + D ++ ADI+L + ++ + + + +
Sbjct: 220 SVAMGNGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIP 261
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 4e-29
Identities = 86/343 (25%), Positives = 134/343 (39%), Gaps = 76/343 (22%)
Query: 256 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARA 315
+ G + K A+E + + DKTGTLT + V ++ N D+ ++ LAA
Sbjct: 15 ELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV----TDLVPLNGDERELLRLAAI- 69
Query: 316 ARLENQDA--IDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASK 373
E + I AI+ K+A H + +K I G A
Sbjct: 70 --AERRSEHPIAEAIV------KKALE-----HGIELGEPEKVEVIA-----GEGVVADG 111
Query: 374 ---GAPEQILNLCKEKK-EIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTF 429
G L ++ ++ +V ++K ++ VA
Sbjct: 112 ILVGNKR----LMEDFGVAVSNEVELALEKLEREAKTAVIVARNG-------------RV 154
Query: 430 CGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLG 489
G++ + D + + ++ +G+ V MITGD A+ R L
Sbjct: 155 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN------------- 201
Query: 490 RDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD 549
+D +I A V P K E VK LQ K VV GDG+NDAPAL +AD
Sbjct: 202 ----------LDLVI------AEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQAD 244
Query: 550 IGIAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMK 592
+GIAV +D A + DIVL L +++A+ SR ++K
Sbjct: 245 LGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287
|
| >2o98_P H-ATPase PMA2, plasma membrane H+ ATPase; 14-3-3, electrochemical proton G cell turgor, regulation, protein binding; HET: FSC; 2.70A {Nicotiana plumbaginifolia} Length = 52 | Back alignment and structure |
|---|
Score = 80.1 bits (197), Expect = 6e-19
Identities = 27/46 (58%), Positives = 38/46 (82%)
Query: 838 SLIAEQARRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
+ +AE+A+RRAEIAR E+HTL+GHVESVV+LK LD+ IQ ++ +
Sbjct: 7 NQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI 52
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 83.7 bits (206), Expect = 2e-16
Identities = 90/696 (12%), Positives = 180/696 (25%), Gaps = 251/696 (36%)
Query: 293 RNLIEVFNRNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEV-HFLPFN 351
++++ VF + + +D D PK + +E+ H +
Sbjct: 19 KDILSVFEDAFVDN-----------FDCKDVQDM--------PKSILSK-EEIDHIIMSK 58
Query: 352 PVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRS---- 407
T R + K+E ++ KF E LR
Sbjct: 59 DAVSGT-----------LR--------LFWTLLSKQE------EMVQKFVEEVLRINYKF 93
Query: 408 LAVAIQEVSEMTKESPGGPWT--------FCGLLPLFDP---PRHDSVDTIRRAL----- 451
L I+ P +F R +R+AL
Sbjct: 94 LMSPIKTEQR----QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149
Query: 452 NLGVCVK-MI-TGDQ-LAI--AKETGRRLGMATNMYPSSSLLGRDKDENEAL-PVDELIE 505
V + ++ +G +A+ + M ++ + L L + +L+
Sbjct: 150 AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN--LKNCNSPETVLEMLQKLLY 207
Query: 506 EADGFAGVFPEH-----------KYEIVKILQEKKH-----VVGMTGDGVNDAPALKKAD 549
+ D +H + E+ ++L+ K + V+ V +A A +
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL----LNVQNAKAWNAFN 263
Query: 550 IG---------IAVADATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGFVL 600
+ V D AA I L S LT + +L
Sbjct: 264 LSCKILLTTRFKQVTDFLSAAT-TTHISLDHH------SMTLT--------PDEVKSLLL 308
Query: 601 LAL-IWEYDFPPFMV----LIIAILNDGTIMTISKDRVKPSPRPDSWKLNEIFATGIVI- 654
L D P ++ ++I+ + + KL I + + +
Sbjct: 309 KYLDCRPQDLPREVLTTNPRRLSII--AESIRDGLATWDNWKHVNCDKLTTIIESSLNVL 366
Query: 655 ------GTYLALV----------TVL-FYW---VVVDTDFFETHFHVKSL-SSNSEEVSS 693
+ L +L W + D H SL +E +
Sbjct: 367 EPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 694 ALY-LQVSIISQALIFVTRSQSWSFLERPGALLMCAFVVAQLVATLIAVYA--------H 744
++ + + + + L +++ Y
Sbjct: 427 SIPSIYLELKVKLEN-----------------------EYALHRSIVDHYNIPKTFDSDD 463
Query: 745 ISFAYISGVGWGWAGVIWLYSFVFY----------------IPLDVIKFI---VRYALSG 785
+ Y+ + YS + + + LD +F+ +R+
Sbjct: 464 LIPPYLDQ---------YFYSHIGHHLKNIEHPERMTLFRMVFLD-FRFLEQKIRH--DS 511
Query: 786 EAWNLVFDRKTAFTSKKDYGKEDRAAQWIL-SHRSLQGLIGTDLEFNGRKSRPSLIAEQA 844
AWN K Y +I + + L+ L+F
Sbjct: 512 TAWNASGSILNTLQQLKFYKP------YICDNDPKYERLVNAILDF-------------- 551
Query: 845 RRRAEIARLGEIHTLRGHVESVVRLKNLDLNVIQAA 880
L E+++ K DL ++ A
Sbjct: 552 --------------LPKIEENLICSKYTDL--LRIA 571
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 6e-05
Identities = 44/301 (14%), Positives = 89/301 (29%), Gaps = 96/301 (31%)
Query: 170 FGK---AAHLVDSTEVVGHFQ-QVL-TSIGNFCICSIAVGMILEIIV------------- 211
GK A + S +V ++ ++ N C V +L+ ++
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKN-CNSPETVLEMLQKLLYQIDPNWTSRSDH 219
Query: 212 MFPIQHR--SYRDGINNLLV-------LLIGGIPIAM-----PTVLSVTLAIGSHRLSQQ 257
I+ R S + + LL LL+ + + + L
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLV------LLNVQNAKAWNA-FNLSCKIL--- 269
Query: 258 GAITKRMTAIEEMAGMDVLCSDKTGTLTLNR----LTVDRNLIEVFNR--NMDKDM---- 307
+T R + D L + T ++L+ LT D + + +
Sbjct: 270 --LTTRFKQV-----TDFLSAATTTHISLDHHSMTLTPDEVK-SLLLKYLDCRPQDLPRE 321
Query: 308 --------IVLLAAR----AARLEN-----QDAIDAAI---INMLADPKEARANIKEVHF 347
+ ++A A +N D + I +N+L +P E R +
Sbjct: 322 VLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVL-EPAEYRKMFDRLSV 380
Query: 348 LPFN-PVDKRTAITYIDSDGNWYRASKGAPEQILNLC-------KEKKEIAVKVHTIIDK 399
P + + W+ K ++N K+ KE + + +I +
Sbjct: 381 FPPSAHIPTILLSLI------WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLE 434
Query: 400 F 400
Sbjct: 435 L 435
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 71.3 bits (176), Expect = 3e-15
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 68 AAAALMAHLAPKT-KVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQ 126
A L+ L KT V+R+G+ + GDI+ ++ G+ IP D ++EG+ +D+
Sbjct: 2 AIKKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDE 59
Query: 127 ASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGV 166
S ++GE +PV K DEVF + G + + AT V
Sbjct: 60 --SMISGEPVPVLKSKGDEVFGATINNTGVL--KIRATRV 95
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 67.9 bits (167), Expect = 7e-14
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 64 NAGNAAAALMAHLAPKT-KVLREGQWKEQDAAVLVP------GDIISIKLGDIIPADARL 116
A A L++ L ++ + V GDII + G P D R+
Sbjct: 4 TMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRV 62
Query: 117 LEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGV 166
+EG +D+ S +TGE++PV KK V +GS ++G + ++ AT V
Sbjct: 63 IEGHS-MVDE--SLITGEAMPVAKKPGSTVIAGSINQNGSL--LICATHV 107
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 1e-12
Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 35/145 (24%)
Query: 322 DAIDAAIINML--ADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQI 379
+ +D A++ + + +++ +PF+ +R ++ ++ + KGA ++I
Sbjct: 34 NLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEI 93
Query: 380 LNLCK-------------EKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGP 426
LN+C K+ + D +GLR +AVA TK P
Sbjct: 94 LNVCSQVRHNGEIVPLDDIMLR---KIKRVTDTLNRQGLRVVAVA-------TKYLPARE 143
Query: 427 W----------TFCGLLPLFDPPRH 441
G + D H
Sbjct: 144 GDYQRADESDLILEGYIAFLDHHHH 168
|
| >3m50_P N.plumbaginifolia H+-translocating ATPase mRNA; all helical, protein-protein complex, protein binding; HET: EBT; 2.60A {Nicotiana plumbaginifolia} PDB: 3m51_P* Length = 31 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 3e-09
Identities = 16/29 (55%), Positives = 24/29 (82%)
Query: 855 EIHTLRGHVESVVRLKNLDLNVIQAAHTV 883
E+HTL+GHVE+VV+LK LD+ IQ ++ +
Sbjct: 3 ELHTLKGHVEAVVKLKGLDIETIQQSYDI 31
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 45.9 bits (110), Expect = 9e-06
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 4/62 (6%)
Query: 516 EHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTE 571
K V +++ + V G+ V+D LK+ + ADA A+ A +
Sbjct: 82 SDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPADACSGAQKAVGYICKC 141
Query: 572 PG 573
G
Sbjct: 142 SG 143
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 516 EHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTE 571
+ K +K E++ + V G+ VND P +AVA A D RGAA V T
Sbjct: 85 DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVASAHDVVRGAARAVTTV 144
Query: 572 PG 573
PG
Sbjct: 145 PG 146
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 3e-05
Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 516 EHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTE 571
+K L EK + V GD + D P ++K + +AVADA AD V
Sbjct: 100 SNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRI 159
Query: 572 PG 573
G
Sbjct: 160 AG 161
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 43.6 bits (104), Expect = 4e-05
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Query: 516 EHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTE 571
K EI + ++EK + +G GD V D +KK +AV +A + R A +
Sbjct: 83 YKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVRNAVEEVRKVAVYITQR 142
Query: 572 PG 573
G
Sbjct: 143 NG 144
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 6e-05
Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 4/62 (6%)
Query: 516 EHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTE 571
K + L++ + GD + D P +++ +G+AV++A AD
Sbjct: 93 VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVSNAVPQVLEFADWRTER 152
Query: 572 PG 573
G
Sbjct: 153 TG 154
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 6e-05
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 27/127 (21%)
Query: 447 IRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEE 506
I A N G+ V ++TG++ I + +L + ++ G D+ A +EL E
Sbjct: 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLKV-DYLF-----QGV-VDKLSAA--EELCNE 90
Query: 507 ADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566
G+ E V GD +NDA LK+ I A A R +
Sbjct: 91 ----LGINLEQ--------------VAYIGDDLNDAKLLKRVGIAGVPASAPFYIRRLST 132
Query: 567 IVLTEPG 573
I L + G
Sbjct: 133 IFLEKRG 139
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 27/127 (21%)
Query: 447 IRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEE 506
I+ ++ + V +++G I + LG+ + LG+ ++ A +L+++
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGI-KLFF-----LGK-LEKETAC--FDLMKQ 94
Query: 507 ADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566
AGV E GD D PA AVADA + A D
Sbjct: 95 ----AGVTAEQ--------------TAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVD 136
Query: 567 IVLTEPG 573
VL+ G
Sbjct: 137 HVLSTHG 143
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 27/127 (21%)
Query: 447 IRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEE 506
IR + + V +ITG + + ++ LG+ T++Y G+ D+ A EL+
Sbjct: 85 IRCLITSDIDVAIITGRRAKLLEDRANTLGI-THLY-----QGQ-SDKLVAY--HELLAT 135
Query: 507 ADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566
PE V GD + D P + + + +AVADA A
Sbjct: 136 ----LQCQPEQ--------------VAYIGDDLIDWPVMAQVGLSVAVADAHPLLLPKAH 177
Query: 567 IVLTEPG 573
V G
Sbjct: 178 YVTRIKG 184
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 8e-05
Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 27/127 (21%)
Query: 447 IRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEE 506
I+ + GV +I+G + AI + + LG+ +++ DK +D+L+ E
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGI-EHLFQGRE----DKLV----VLDKLLAE 105
Query: 507 ADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566
+ E V GD + D P +++ +G+AVA+A R A
Sbjct: 106 ----LQLGYEQ--------------VAYLGDDLPDLPVIRRVGLGMAVANAASFVREHAH 147
Query: 567 IVLTEPG 573
+ G
Sbjct: 148 GITRAQG 154
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 27/127 (21%)
Query: 447 IRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEE 506
++ +N G+ + +ITG + I + + LG+ + +Y G+ D+ +A ++ ++
Sbjct: 61 VKALMNAGIEIAIITGRRSQIVENRMKALGI-SLIY-----QGQ-DDKVQAY--YDICQK 111
Query: 507 ADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD 566
+ PE G GD + D P ++K + + VAD A+
Sbjct: 112 ----LAIAPEQ--------------TGYIGDDLIDWPVMEKVALRVCVADGHPLLAQRAN 153
Query: 567 IVLTEPG 573
V G
Sbjct: 154 YVTHIKG 160
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 3e-04
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 513 VFPEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIV 568
+F K E++ +LQ ++ + GDG ND K A I IA +A + + A
Sbjct: 138 MFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NAKEVLKQHATHC 196
Query: 569 LTEPGLSVII 578
+ EP L++I
Sbjct: 197 INEPDLALIK 206
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 5e-04
Identities = 11/33 (33%), Positives = 15/33 (45%)
Query: 536 GDGVNDAPALKKADIGIAVADATDAARGAADIV 568
GD ND P + A+ATD + +D V
Sbjct: 176 GDSNNDMPMFQLPVRKACPANATDNIKAVSDFV 208
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 42.0 bits (99), Expect = 5e-04
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 513 VFPEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIV 568
V + K +I+ L ++ V GDG ND + A +G+A A A
Sbjct: 241 VSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HAKPKVEAKAQTA 299
Query: 569 LTEPGLSVII 578
+ GL ++
Sbjct: 300 VRFAGLGGVV 309
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 5e-04
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Query: 513 VFPEHKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIV 568
+ K EI++ + + + + GDG ND KKA + IA A + ADI
Sbjct: 139 LKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADIC 197
Query: 569 LTEPGLSVII 578
+ + L I+
Sbjct: 198 IEKRDLREIL 207
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 41.3 bits (97), Expect = 7e-04
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 553
K ++ L E + M GD V D A K +D+ A
Sbjct: 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFA 187
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 883 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-30 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 4e-29 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-19 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-16 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-14 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 2e-14 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 5e-10 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 1e-09 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 9e-08 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 7e-07 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 4e-06 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 2e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-05 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 1e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 1e-04 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 2e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 6e-04 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 7e-04 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 120 bits (302), Expect = 5e-30
Identities = 36/346 (10%), Positives = 86/346 (24%), Gaps = 38/346 (10%)
Query: 260 ITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDR-------NLIEVFNRNMDKDMI---- 308
+ + + + + + + + N ++ N + DM+
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVF 85
Query: 309 -VLLAARAARLENQD--AIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSD 365
+ L +L + + A + + N+ + L + + +
Sbjct: 86 SIHLIDILKKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN 145
Query: 366 GNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGG 425
+ + A ++ + + A+ + + + ++ K+
Sbjct: 146 NIYAALEEFATTELHVSDATLFSLKGA----LWTLAQEVYQEWYLGSKLYEDVEKK-IAR 200
Query: 426 PWTFCGLLPLFDP--PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYP 483
G + P + + G + + TG LG+
Sbjct: 201 TTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEA 260
Query: 484 SSSLLGRDKDENEAL---------PVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGM 534
D E E + P A Y + K V +
Sbjct: 261 DFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFI 320
Query: 535 TGDGVNDAPALKKADI-GIAVA-------DATDAARGAADIVLTEP 572
GD + D + +K I A + AD V+
Sbjct: 321 VGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 112 bits (280), Expect = 4e-29
Identities = 60/156 (38%), Positives = 83/156 (53%), Gaps = 2/156 (1%)
Query: 428 TFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATN--MYPSS 485
T DPPR + + +I+ + G+ V MITGD A RR+G+
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 486 SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPAL 545
+ GR+ D+ E A FA V P HK +IV+ LQ + MTGDGVNDAPAL
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 129
Query: 546 KKADIGIAVADATDAARGAADIVLTEPGLSVIISAV 581
KKA+IGIA+ T A+ A+++VL + S I++AV
Sbjct: 130 KKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAV 165
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 83.6 bits (206), Expect = 1e-19
Identities = 45/154 (29%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 428 TFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSL 487
T D + + ++ +G+ V MITGD A+ R L + +
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVL-- 68
Query: 488 LGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKK 547
P K E VK LQ K VV GDG+NDAPAL +
Sbjct: 69 ---------------------------PHQKSEEVKKLQ-AKEVVAFVGDGINDAPALAQ 100
Query: 548 ADIGIAVADATDAARGAADIVLTEPGLSVIISAV 581
AD+GIAV +D A + DIVL L +++A+
Sbjct: 101 ADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 74.0 bits (181), Expect = 2e-16
Identities = 36/112 (32%), Positives = 51/112 (45%), Gaps = 15/112 (13%)
Query: 81 KVLREGQWKEQ--DAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPV 138
KV R + Q A +VPGDI+ + +GD +PAD R+L + S LTGES+ V
Sbjct: 4 KVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSV 63
Query: 139 TKKTADE-------------VFSGSTCKHGEIEAVVIATGVHSFFGKAAHLV 177
K T +FSG+ G+ +V TGV + GK +
Sbjct: 64 IKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 75.5 bits (185), Expect = 1e-14
Identities = 40/289 (13%), Positives = 85/289 (29%), Gaps = 93/289 (32%)
Query: 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVL---ANGGGQGPDWQDFVGIVCLLLINSTIS 58
++ + + + L ++ AA ++ VL G + + I+ +L+ N+ +
Sbjct: 46 GKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVG 105
Query: 59 FIEENNAGNAAAALMAHLAPKTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLE 118
+E NA NA AL + T+ D P +L E
Sbjct: 106 VWQERNAENAIEALKEYEPAATE-------------------------QDKTPLQQKLDE 140
Query: 119 GDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLVD 178
GE L ++ +++ G V
Sbjct: 141 -------------FGEQL------------------SKVISLICVAVWLINIGHFNDPVH 169
Query: 179 STEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIA 238
+ IAV + + IP
Sbjct: 170 GGSWIRGAIYYFK---------IAVALA-------------------------VAAIPEG 195
Query: 239 MPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLN 287
+P V++ LA+G+ R++++ AI + + ++E + + ++
Sbjct: 196 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLIS 244
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 71.4 bits (174), Expect = 2e-14
Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 27/148 (18%)
Query: 322 DAIDAAIINMLA----DPKEARANIKEVHFLPFNPVDKRTAITYID--SDGNWYRASKGA 375
DA ++A++ + ++ R +V + FN +K + + + KGA
Sbjct: 66 DASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGA 125
Query: 376 PEQILNLCKE----------KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSE-------- 417
PE+IL+ C KE+ + G R L +
Sbjct: 126 PERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK 185
Query: 418 ---MTKESPGGPWTFCGLLPLFDPPRHD 442
P F GL+ + D H
Sbjct: 186 FDTDELNFPTEKLCFVGLMSMIDHHHHH 213
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 58.8 bits (141), Expect = 5e-10
Identities = 24/185 (12%), Positives = 56/185 (30%), Gaps = 23/185 (12%)
Query: 250 GSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIEVFNRNMDKDMIV 309
G + + + + + E+A + LC+D + + + + +
Sbjct: 33 GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFN------ETKGVYEKVGEATETALT 86
Query: 310 LLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGN-- 367
L + + + + A R +K+ L F+ K ++ + +
Sbjct: 87 TLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRA 146
Query: 368 ---WYRASKGAPEQILNLCK------------EKKEIAVKVHTIIDKFAERGLRSLAVAI 412
KGAPE +++ C + + LR LA+A
Sbjct: 147 AVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206
Query: 413 QEVSE 417
++
Sbjct: 207 RDTPP 211
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 56.9 bits (136), Expect = 1e-09
Identities = 22/156 (14%), Positives = 47/156 (30%), Gaps = 5/156 (3%)
Query: 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEA 497
R + + + +I+G + +Y + +N+
Sbjct: 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCN-----HASFDNDY 129
Query: 498 LPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADA 557
+ +D + K ++ L E + M GD V D A K +D+ A
Sbjct: 130 IHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYL 189
Query: 558 TDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKN 593
+ R L I + + + + ++N
Sbjct: 190 LNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 50.8 bits (121), Expect = 9e-08
Identities = 16/59 (27%), Positives = 22/59 (37%)
Query: 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG 573
++++K GD D PA AVADA + A D VL+ G
Sbjct: 82 ETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHG 140
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.3 bits (119), Expect = 2e-07
Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 12/150 (8%)
Query: 426 PWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSS 485
+ + + R V V +I+G +I + +L + ++
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFAN 129
Query: 486 SLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVG--MTGDGVNDAP 543
L E + E+ G +++K+L+EK H M GDG D
Sbjct: 130 RLKFYFNGEYAGFDETQPTAESGGKG--------KVIKLLKEKFHFKKIIMIGDGATDME 181
Query: 544 ALKKADIGIAVA--DATDAARGAADIVLTE 571
A AD I + A +T+
Sbjct: 182 ACPPADAFIGFGGNVIRQQVKDNAKWYITD 211
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 48.9 bits (115), Expect = 7e-07
Identities = 18/76 (23%), Positives = 24/76 (31%)
Query: 506 EADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAA 565
+ + L K V GDG ND A K +AVA A + A
Sbjct: 145 HVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENA 204
Query: 566 DIVLTEPGLSVIISAV 581
D V + A+
Sbjct: 205 DYVTKKEYGEGGAEAI 220
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 47.5 bits (111), Expect = 2e-06
Identities = 36/198 (18%), Positives = 64/198 (32%), Gaps = 11/198 (5%)
Query: 394 HTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNL 453
T+++ + A +EV ++TKE+ G F L D
Sbjct: 13 STLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIK 72
Query: 454 GVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGF--- 510
+ + + K G + + + + + ++K + + LI +
Sbjct: 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD 132
Query: 511 -------AGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARG 563
E +I KI GDG ND KKA + IA A +
Sbjct: 133 VEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKE 191
Query: 564 AADIVLTEPGLSVIISAV 581
ADI + + L I+ +
Sbjct: 192 KADICIEKRDLREILKYI 209
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 46.9 bits (110), Expect = 4e-06
Identities = 32/216 (14%), Positives = 63/216 (29%), Gaps = 26/216 (12%)
Query: 382 LCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRH 441
L + I+ K I ++GL VS ++ + L + P
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLT--------VSLLSGNVIPVVYALKIFLGINGPVFG 65
Query: 442 DSVDTIRRALNLGVCVKMITGDQ----LAIAKETGRRLGMATNMYPSSSLLGRDKDENEA 497
++ + N G K + + L + + TN + +S E+
Sbjct: 66 ENGGIMFD--NDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVD 123
Query: 498 LPVDELIEE------ADGFAGVFPEHKYEIVKILQEKKHV------VGMTGDGVNDAPAL 545
E + + + + + + K+ + + GD ND P
Sbjct: 124 YVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMF 183
Query: 546 KKADIGIAVADATDAARGAADIVLTEPGLSVIISAV 581
+ A+ATD + +D V I
Sbjct: 184 QLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIF 219
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.4 bits (106), Expect = 2e-05
Identities = 17/59 (28%), Positives = 23/59 (38%)
Query: 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG 573
++K V + GD ND L AVA+ATD+A+ A VL
Sbjct: 209 YTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSH 267
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.5 bits (104), Expect = 2e-05
Identities = 12/58 (20%), Positives = 18/58 (31%)
Query: 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTE 571
+ K + V + + V GD ND L +A GI + R
Sbjct: 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVH 187
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 42.6 bits (99), Expect = 1e-04
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 536 GDGVNDAPALKKADIGIAVADATDAARGAADIV 568
GD ND ++ A +G+AV +A + + A+ V
Sbjct: 220 GDQENDIAMIEYAGVGVAVDNAIPSVKEVANFV 252
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 42.6 bits (99), Expect = 1e-04
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 536 GDGVNDAPALKKADIGIAVADATDAARGAADIV 568
GD +ND L+ A G+A+ +A + + AD V
Sbjct: 236 GDSLNDKSMLEAAGKGVAMGNAREDIKSIADAV 268
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 42.2 bits (98), Expect = 2e-04
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Query: 536 GDGVNDAPALKKADIGIAVADATDAARGAADIVLT---EPGLSVIISAVLTSRAIF 588
GD NDA LK A A+ +A + + A G +I AVL + F
Sbjct: 213 GDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTYPF 268
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 40.3 bits (93), Expect = 6e-04
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 504 IEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARG 563
+E ++ ++ +K+ +V GD ND ++A + +A+ +A + +
Sbjct: 182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVF-GDNENDLFMFEEAGLRVAMENAIEKVKE 240
Query: 564 AADIV 568
A+DIV
Sbjct: 241 ASDIV 245
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 517 HKYEIVKILQEKKHV----VGMTGDGVNDAPALKKADIGIAVADATDAARGAADIV 568
K + + + + GDG ND L+ A IG+A+ A + + AAD V
Sbjct: 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYV 241
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 883 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 100.0 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.98 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.94 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.94 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.86 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.83 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.59 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.41 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.39 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.36 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.33 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.25 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.22 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.2 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.16 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.06 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.06 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.0 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.96 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.95 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.9 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.88 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.7 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.09 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.03 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 97.92 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.89 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.72 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.72 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.48 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.47 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.07 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.92 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.84 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.76 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.7 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.32 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.3 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.01 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.01 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.79 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.76 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.52 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.31 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.96 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 94.84 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 94.73 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.69 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 94.68 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.56 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 94.24 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 93.8 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 93.6 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.46 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 91.65 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 88.54 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 87.33 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.8e-32 Score=245.12 Aligned_cols=390 Identities=18% Similarity=0.166 Sum_probs=266.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 82499999999797999999999999999951899---999803488999999999999999999799999998404799
Q 002768 2 QENKFLKFLSFMWNPLSWVMEAAAVMAIVLANGGG---QGPDWQDFVGIVCLLLINSTISFIEENNAGNAAAALMAHLAP 78 (883)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~aai~~~~~~~~~~---~~~~~~~~~~i~~~l~i~~~~~~~~e~~a~~~~~~l~~~~~~ 78 (883)
++|+|+.|+++|++|+.++++++++++++++...+ ...+|.|++.|++++++|+.++++||++++++++++++..++
T Consensus 46 ~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~ 125 (472)
T d1wpga4 46 GKSLWELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPA 125 (472)
T ss_dssp CCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSCTTSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCC
T ss_pred CCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEEEEEEEEEEECHHHHHHHHHHHHCCC
T ss_conf 99999999999838999999999999999998732653202376766631124465257767750177788877521222
Q ss_pred EEEEEECCEEEEEECCCCCCCCEEEEECCCEECCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCEEEEEEEEEECCEE
Q ss_conf 04999799699987667689949998079843030899840881584246566774443014689814310047408169
Q 002768 79 KTKVLREGQWKEQDAAVLVPGDIISIKLGDIIPADARLLEGDPLKIDQASSALTGESLPVTKKTADEVFSGSTCKHGEIE 158 (883)
Q Consensus 79 ~~~V~rdg~~~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~g~~l~vde~es~LTGEs~pv~K~~g~~v~aGs~v~~G~~~ 158 (883)
. ..||++|+|.++. + +||+.+. +.
T Consensus 126 ~-------------------------~~~~~~P~d~~l~--------~-----~g~~i~~------------------~~ 149 (472)
T d1wpga4 126 A-------------------------TEQDKTPLQQKLD--------E-----FGEQLSK------------------VI 149 (472)
T ss_dssp C-------------------------CCCCCCHHHHHHH--------H-----HHHHHHH------------------HH
T ss_pred C-------------------------CCCCCCHHHHHHH--------H-----HHHHHHH------------------HH
T ss_conf 3-------------------------5665864888999--------9-----9999989------------------99
Q ss_pred EEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCH
Q ss_conf 99987052236654765310456668189999999899999999999999986751255745777999999997305760
Q 002768 159 AVVIATGVHSFFGKAAHLVDSTEVVGHFQQVLTSIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIA 238 (883)
Q Consensus 159 ~~V~~tG~~T~~gki~~l~~~~~~~~~~~~~~~~i~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~i~~~l~lli~~iP~a 238 (883)
+.|..+|..|.+|++...+..... .....+.+...+++.++++|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~ai~l~V~~iPEg 195 (472)
T d1wpga4 150 SLICVAVWLINIGHFNDPVHGGSW----------------------------------IRGAIYYFKIAVALAVAAIPEG 195 (472)
T ss_dssp HHHHHHHHHHCCTTSSSCCSSSCS----------------------------------SSCGGGHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----------------------------------HHHHHHHHHHHHHHHHHHCHHH
T ss_conf 978799999999999999861046----------------------------------8999999999999999867516
Q ss_pred HHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHCCCEEEEECCC--CCCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 3699999999967441026078636025542028318982776--74103961355788984167889489999999970
Q 002768 239 MPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKT--GTLTLNRLTVDRNLIEVFNRNMDKDMIVLLAARAA 316 (883)
Q Consensus 239 Lp~~l~~~~~~~~~~l~~~~i~vk~~~~iE~Lg~v~~i~~DKT--GTLT~n~m~v~~~~i~~~~~~~~~~~~l~~a~~~~ 316 (883)
||+++++++++|++||+|+|++||++.++|++|+..+.|.||| +|||.|-+.+
T Consensus 196 Lp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v------------------------- 250 (472)
T d1wpga4 196 LPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV------------------------- 250 (472)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH-------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------------
T ss_conf 8999999999999999863660665899999999988886776401334369999-------------------------
Q ss_pred CCCCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 12267847899999808907884036076863588887418999991799299997494899986500428999999999
Q 002768 317 RLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTI 396 (883)
Q Consensus 317 ~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~ 396 (883)
T Consensus 251 -------------------------------------------------------------------------------- 250 (472)
T d1wpga4 251 -------------------------------------------------------------------------------- 250 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred HHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC
Q ss_conf 99998619937677540134456679999952776327889999337999999985898399982696899999999909
Q 002768 397 IDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLG 476 (883)
Q Consensus 397 i~~~~~~G~R~l~~A~~~l~~~~~~~~e~~l~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~g 476 (883)
T Consensus 251 -------------------------------------------------------------------------------- 250 (472)
T d1wpga4 251 -------------------------------------------------------------------------------- 250 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECC
Q ss_conf 99888898754588789789112899987549188748433999999996549989999699689775630991599446
Q 002768 477 MATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVAD 556 (883)
Q Consensus 477 i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~ 556 (883)
T Consensus 251 -------------------------------------------------------------------------------- 250 (472)
T d1wpga4 251 -------------------------------------------------------------------------------- 250 (472)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
T ss_conf --------------------------------------------------------------------------------
Q ss_pred CCHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-CCCCCCCCCC
Q ss_conf 318885014676027982389999999899999999999999999985048987599999999731101-0334687899
Q 002768 557 ATDAARGAADIVLTEPGLSVIISAVLTSRAIFQRMKNYTLGFVLLALIWEYDFPPFMVLIIAILNDGTI-MTISKDRVKP 635 (883)
Q Consensus 557 ~~~~ak~aADivl~~~~~~~i~~~i~~gR~~~~~i~~~~~~~~~~~~~~~~~~~~~~il~i~il~d~~~-~~~~~d~~~p 635 (883)
...+....+.++.+++|+|++|+|+++|+.+ ++++.|+..+
T Consensus 251 --------------------------------------~~~~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~ 292 (472)
T d1wpga4 251 --------------------------------------VCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDL 292 (472)
T ss_dssp --------------------------------------HHHHHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCS
T ss_pred --------------------------------------HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf --------------------------------------999999973998642379999999875888999996388854
Q ss_pred ------CCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC--CC--------------CCCC--CCCCHHH
Q ss_conf ------99999-6004778899999999999999999999882012233--23--------------3345--7888688
Q 002768 636 ------SPRPD-SWKLNEIFATGIVIGTYLALVTVLFYWVVVDTDFFET--HF--------------HVKS--LSSNSEE 690 (883)
Q Consensus 636 ------~~~p~-~~~~~~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~--~~--------------~~~~--~~~~~~~ 690 (883)
|+.++ ....+.++.....+|.+.++.++.++++.+....... .+ .... .......
T Consensus 293 ~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (472)
T d1wpga4 293 DIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAP 372 (472)
T ss_dssp GGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCH
T ss_pred HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 43049999997566499999999999999999999999999997237998767877677640677654465203455676
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHCCCCCCCC-C--HHHHHHHHHHHHHHHHHHHHHHHC-C-CCCCCCCCHHHHHHHHHHH
Q ss_conf 9999999999999999-8877358885455-3--269999999999999999998310-1-1232475106678999999
Q 002768 691 VSSALYLQVSIISQAL-IFVTRSQSWSFLE-R--PGALLMCAFVVAQLVATLIAVYAH-I-SFAYISGVGWGWAGVIWLY 764 (883)
Q Consensus 691 ~~~~~~~~~~i~~~~~-i~~~r~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 764 (883)
...+++|...+.+|.. .++.|++..+.++ . .|.++++++++..++...+ +|.+ . .++.+.+++|.+|++++.+
T Consensus 373 ~a~T~~F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i-~yiP~l~~vf~~~pL~~~~w~i~l~~ 451 (472)
T d1wpga4 373 EPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI-LYVDPLPMIFKLKALDLTQWLMVLKI 451 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHH-HHSTTTHHHHTCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf 78999999999999999999825775422257631699999999999999999-98667788880658899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999998883165
Q 002768 765 SFVFYIPLDVIKFIVRYALSG 785 (883)
Q Consensus 765 ~~~~~~~~~~~K~~~r~~~~~ 785 (883)
+++.++..|++|++.|++..|
T Consensus 452 ~~~~~~~~El~K~~~R~~~~~ 472 (472)
T d1wpga4 452 SLPVIGLDEILKFIARNYLEG 472 (472)
T ss_dssp HTHHHHHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999983108899
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.98 E-value=5.4e-32 Score=241.77 Aligned_cols=149 Identities=40% Similarity=0.565 Sum_probs=137.2
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHHCCCEEEE
Q ss_conf 89999337999999985898399982696899999999909998888--9875458878978911289998754918874
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMY--PSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 436 ~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~ 513 (883)
-||||++++++|+.|+++||+++|+|||+..+|.++|+++||..+.. ....+.+.+++.....+..+..++..+|+|+
T Consensus 18 ~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~ 97 (168)
T d1wpga2 18 LDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 97 (168)
T ss_dssp ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 48896539999999998849899989999799999999849988764111000346300001278876655322300000
Q ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHHH
Q ss_conf 84339999999965499899996996897756309915994463188850146760279823899999998
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTS 584 (883)
Q Consensus 514 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~g 584 (883)
+|+||..+|+.+|++|+.|+|+|||.||+|||++|||||+|++++++++++||+++++++|+.++++|+||
T Consensus 98 ~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 98 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEETTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCHHHHHHHHHCC
T ss_conf 11478889999874045404770677888999859888886551199998489999159989999999749
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.94 E-value=7.9e-32 Score=240.60 Aligned_cols=312 Identities=10% Similarity=-0.026 Sum_probs=209.3
Q ss_pred CHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEEE-----ECCCCCCHHH-HHHHHHHH---H-CCCCCCHHHHHHHHHH
Q ss_conf 60255420283189827767410396135578898-----4167889489-99999997---0-1226784789999980
Q 002768 263 RMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLIE-----VFNRNMDKDM-IVLLAARA---A-RLENQDAIDAAIINML 332 (883)
Q Consensus 263 ~~~~iE~Lg~v~~i~~DKTGTLT~n~m~v~~~~i~-----~~~~~~~~~~-~l~~a~~~---~-~~~~~~~i~~ai~~~~ 332 (883)
-..+.|.||..+++|+|||||+|.|+|++..+... ....+.+.+- ++...+.+ . ...-+++...+++...
T Consensus 29 ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (380)
T d1qyia_ 29 LLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKDKILNKLKSLGLNSNWDMLFIVFSIHLIDILKKLSHDEIEAFMYQD 108 (380)
T ss_dssp HHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHCS
T ss_pred HHHCHHHCCCCEEEECCCCCCHHHHHHEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 76120112564045337655100433111330532466766626888069999999999999877434898577898777
Q ss_pred CCHHH----HHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 89078----84036076863588887418999991799299997494899986500428999999999999986199376
Q 002768 333 ADPKE----ARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILNLCKEKKEIAVKVHTIIDKFAERGLRSL 408 (883)
Q Consensus 333 ~~~~~----~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~Il~~~~~~~~~~~~~~~~i~~~~~~G~R~l 408 (883)
..... .+..+.....+||++.+|+|+......++.+..+.+|+++.+.-. +....++...+.+++++|+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~~----~~~~~~~~~~~~~~a~~~~r~l 184 (380)
T d1qyia_ 109 EPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHVS----DATLFSLKGALWTLAQEVYQEW 184 (380)
T ss_dssp SCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTCS----CCGGGSTTCHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCHHHCCCC----HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 543640899987536555677514888876532455314475552137652875----8889999868999999999998
Q ss_pred EEEEECCCCCCCCCCCCCCEEEEECCCCCCCC--CCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 77540134456679999952776327889999--3379999999858983999826968999999999099988889875
Q 002768 409 AVAIQEVSEMTKESPGGPWTFCGLLPLFDPPR--HDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSS 486 (883)
Q Consensus 409 ~~A~~~l~~~~~~~~e~~l~~lG~i~l~D~lr--~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~ 486 (883)
++|++..++.+.+ ...++...|++..++|+| ++++++++.|+++|+++.|+|||+..+|..+++++|+........+
T Consensus 185 ~~~~~~~~~~~~~-~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i 263 (380)
T d1qyia_ 185 YLGSKLYEDVEKK-IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI 263 (380)
T ss_dssp HHHHHHHHHHHCS-CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGE
T ss_pred HHHHHCCCCCCCC-CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEE
T ss_conf 7722022334553-315667542301356533436399999999987995999889979999999998199534785058
Q ss_pred CCCCCC--------CC-CCCCCHHHHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCC---EEEEE
Q ss_conf 458878--------97-8911289998754918874843399999999654998999969968977563099---15994
Q 002768 487 LLGRDK--------DE-NEALPVDELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKAD---IGIAV 554 (883)
Q Consensus 487 l~~~~~--------~~-~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Ad---vGIa~ 554 (883)
+.+.+. +. ....+-.+.+.....+++++|++|..+++.++..++.|+|+|||.||+||+|+|| |||+|
T Consensus 264 ~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~ 343 (380)
T d1qyia_ 264 ATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLT 343 (380)
T ss_dssp ECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred EECCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEC
T ss_conf 74413331122033110236998699999999808877889999997389988699988998999999987998899945
Q ss_pred C-CCCHHHHH----CCCEEECCCCHHHHHHHH
Q ss_conf 4-63188850----146760279823899999
Q 002768 555 A-DATDAARG----AADIVLTEPGLSVIISAV 581 (883)
Q Consensus 555 ~-~~~~~ak~----aADivl~~~~~~~i~~~i 581 (883)
| .+++..++ .||+++ +++..+...+
T Consensus 344 G~~g~~~~~el~~~~AD~ii--~~~~el~~il 373 (380)
T d1qyia_ 344 GLKGKDAAGELEAHHADYVI--NHLGELRGVL 373 (380)
T ss_dssp BTTBGGGHHHHHHTTCSEEE--SSGGGHHHHH
T ss_pred CCCCCCCHHHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 88886437789767999998--8999999999
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.94 E-value=2.1e-26 Score=201.96 Aligned_cols=125 Identities=38% Similarity=0.485 Sum_probs=117.9
Q ss_pred EEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf 27763278899993379999999858983999826968999999999099988889875458878978911289998754
Q 002768 428 TFCGLLPLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEA 507 (883)
Q Consensus 428 ~~lG~i~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 507 (883)
...+.++++|++|++++++|+.|+++||+++|+|||+..++.++|++|||.
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----------------------------- 61 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------------- 61 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH-----------------------------
T ss_conf 147997368899811999999999859979997586335556777654222-----------------------------
Q ss_pred CCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHH
Q ss_conf 918874843399999999654998999969968977563099159944631888501467602798238999999
Q 002768 508 DGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 508 ~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~ 582 (883)
.+|++++|++|..+|+.+|+. +.|+|+|||.||+|||++||+||+|++++++++++||+++++++++.|+.+|+
T Consensus 62 ~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 62 LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp EEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEECCC--------SEEESSCCTHHHHHHHC
T ss_pred HHCCCCCHHHHHHHHHHHHCC-CEEEEEECCCCCHHHHHHCCEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHC
T ss_conf 101211026799999999859-97899967877578897478624537658789984999997899889999859
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.86 E-value=7.1e-22 Score=169.73 Aligned_cols=98 Identities=39% Similarity=0.590 Sum_probs=89.1
Q ss_pred CEEEEEECCEE--EEEECCCCCCCCEEEEECCCEECCCEEEEEEC--CEEEECCCCCCCCCCCCCCCCC-----------
Q ss_conf 90499979969--99876676899499980798430308998408--8158424656677444301468-----------
Q 002768 78 PKTKVLREGQW--KEQDAAVLVPGDIISIKLGDIIPADARLLEGD--PLKIDQASSALTGESLPVTKKT----------- 142 (883)
Q Consensus 78 ~~~~V~rdg~~--~~i~~~~Lv~GDiI~l~~Gd~IPaD~~ll~g~--~l~vde~es~LTGEs~pv~K~~----------- 142 (883)
.+++|+|+|++ ++|++++|||||+|.+++||+|||||+|++++ ++.||| |+|||||.|+.|.+
T Consensus 1 e~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vde--s~lTGEs~pv~K~~~~~~~~~~~~~ 78 (115)
T d1wpga1 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQ--SILTGESVSVIKHTEPVPDPRAVNQ 78 (115)
T ss_dssp SEEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEEC--HHHHSCCSCEECCCSCCCCTTCCGG
T ss_pred CCEEEEECCCCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEEEECCCEEEEE--EECCCCEEEEEEECCCCCCCCCCCC
T ss_conf 92699999984599986999889989999999999515699996126268987--2000346898741366226543443
Q ss_pred --CCEEEEEEEEEECCEEEEEEECCCHHHHHHHHHHH
Q ss_conf --98143100474081699998705223665476531
Q 002768 143 --ADEVFSGSTCKHGEIEAVVIATGVHSFFGKAAHLV 177 (883)
Q Consensus 143 --g~~v~aGs~v~~G~~~~~V~~tG~~T~~gki~~l~ 177 (883)
.+.+|+||.|.+|+++++|++||.+|++||+++++
T Consensus 79 ~~~n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 79 DKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp GCTTEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred CCCCEEEECCEEEEEEEEEEEEEECCCCHHHHHHHHC
T ss_conf 3334477416898456999999996003889999759
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.83 E-value=1.9e-19 Score=152.53 Aligned_cols=123 Identities=22% Similarity=0.317 Sum_probs=105.4
Q ss_pred CCCHHHHHHHHHH----CCHHHHHHCCCEEEEECCCCCCCEEEEEEECC--CCCEEEEECCCHHHHHHHHHC--------
Q ss_conf 6784789999980----89078840360768635888874189999917--992999974948999865004--------
Q 002768 320 NQDAIDAAIINML----ADPKEARANIKEVHFLPFNPVDKRTAITYIDS--DGNWYRASKGAPEQILNLCKE-------- 385 (883)
Q Consensus 320 ~~~~i~~ai~~~~----~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~--~g~~~~~~KGa~e~Il~~~~~-------- 385 (883)
.+||.|.|++.++ .+....+..++.++.+||+|.+|+|+++++.. ++.+++++|||||.|+++|+.
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHEEECCCEE
T ss_conf 66859999999999959899999863828646855788877899997267887434785278899998634353489530
Q ss_pred --CHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC-----------CCCCCCCCEEEEECCCCCCCCCC
Q ss_conf --2899999999999998619937677540134456-----------67999995277632788999933
Q 002768 386 --KKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMT-----------KESPGGPWTFCGLLPLFDPPRHD 442 (883)
Q Consensus 386 --~~~~~~~~~~~i~~~~~~G~R~l~~A~~~l~~~~-----------~~~~e~~l~~lG~i~l~D~lr~~ 442 (883)
+++.++++.+.+++|+++|+|+|++||++++..+ .+..|++|+|+|++++.||||++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred ECHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCC
T ss_conf 0238899999999999740876899999986583225554545701454221798998999988089899
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.59 E-value=7.1e-16 Score=127.05 Aligned_cols=115 Identities=20% Similarity=0.316 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHCC--------------------HHHHHHCCCEEEEECCCCCCCEEEEEEECCCC-----CEEEEECCC
Q ss_conf 78478999998089--------------------07884036076863588887418999991799-----299997494
Q 002768 321 QDAIDAAIINMLAD--------------------PKEARANIKEVHFLPFNPVDKRTAITYIDSDG-----NWYRASKGA 375 (883)
Q Consensus 321 ~~~i~~ai~~~~~~--------------------~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g-----~~~~~~KGa 375 (883)
++|.+.|++..+.. ....+..++.++.+||+|.+|||+++++..++ .+.+|+|||
T Consensus 78 G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGA 157 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 157 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHCCCHHHHHHHCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECC
T ss_conf 89980799999999399757863243033320111455653707888600656627899987489986663159998487
Q ss_pred HHHHHHHHHC----------CHHHHHHHHHHHHHH--HHCCCEEEEEEEECCCCCCC----------CCCCCCCEEEEEC
Q ss_conf 8999865004----------289999999999999--86199376775401344566----------7999995277632
Q 002768 376 PEQILNLCKE----------KKEIAVKVHTIIDKF--AERGLRSLAVAIQEVSEMTK----------ESPGGPWTFCGLL 433 (883)
Q Consensus 376 ~e~Il~~~~~----------~~~~~~~~~~~i~~~--~~~G~R~l~~A~~~l~~~~~----------~~~e~~l~~lG~i 433 (883)
||.|+++|+. +++.++.+.+.++++ +++|+|+|++||++++.... +..|++|+|+|++
T Consensus 158 pe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~~~~~~~~~~~E~~L~flGlv 237 (239)
T d1wpga3 158 PEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVV 237 (239)
T ss_dssp HHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEE
T ss_pred HHHHHHHCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEEEEE
T ss_conf 49999736234439926309999999999999998675378889999999878440113323416688761799999998
Q ss_pred CC
Q ss_conf 78
Q 002768 434 PL 435 (883)
Q Consensus 434 ~l 435 (883)
+|
T Consensus 238 gi 239 (239)
T d1wpga3 238 GM 239 (239)
T ss_dssp EE
T ss_pred CC
T ss_conf 79
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.41 E-value=3.5e-12 Score=100.78 Aligned_cols=71 Identities=27% Similarity=0.148 Sum_probs=61.2
Q ss_pred CHHHHHHHHHHHHH----CCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHHH
Q ss_conf 84339999999965----499899996996897756309915994463188850146760279823899999998
Q 002768 514 FPEHKYEIVKILQE----KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLTS 584 (883)
Q Consensus 514 ~P~~K~~iV~~lq~----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~g 584 (883)
....|...++.+.+ ..+.++++|||.||.+|++.|++||||+++.+.+|++||+|+..++..++.+++++-
T Consensus 149 ~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCCHHHEEEEECCCCHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHHH
T ss_conf 776761332011211001332425662673079999978907998898799998579998999847899999999
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.39 E-value=2.8e-12 Score=101.41 Aligned_cols=74 Identities=20% Similarity=0.219 Sum_probs=64.8
Q ss_pred EEEECHH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHH
Q ss_conf 8874843--399999999654----9989999699689775630991599446318885014676027982389999999
Q 002768 510 FAGVFPE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLT 583 (883)
Q Consensus 510 ~a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~ 583 (883)
+..++|. .|...++.+.+. .+.|+++|||.||.+||+.|+.|+||+||++.+++.||+++..++..++.++++.
T Consensus 204 ~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCEEEEECCCCHHHHHHCCEECCCCCCCHHHHHHHH
T ss_conf 89995554023668988776505572049999297888999984891899689989999858988278875589999998
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.36 E-value=1.8e-11 Score=95.65 Aligned_cols=69 Identities=25% Similarity=0.150 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHH
Q ss_conf 43399999999654----9989999699689775630991599446318885014676027982389999999
Q 002768 515 PEHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLT 583 (883)
Q Consensus 515 P~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~ 583 (883)
...|...++.+.+. ...|+++|||.||.+|++.|++||||+|+.+.+|++||+++..++..+|.+++++
T Consensus 149 ~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 149 GEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCHHHEEEECCCCCHHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 6522789998766510023022564488435999997790899889759999849999898984889999998
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.33 E-value=9.9e-12 Score=97.54 Aligned_cols=73 Identities=23% Similarity=0.259 Sum_probs=63.9
Q ss_pred EEEECHH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHH
Q ss_conf 8874843--399999999654----998999969968977563099159944631888501467602798238999999
Q 002768 510 FAGVFPE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 510 ~a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~ 582 (883)
+..++|. .|...++.+.+. ...++++|||.||.+|++.|+.|+||+||.+.+|+.||+++..++-.++.++++
T Consensus 188 ~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 188 FLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EEEECCCCCCCCCCCCEEHHHCCCCHHCEEEEECCHHHHHHHHHCCCEEEECCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 6885278887654200001100114201799918676799998589189967987999985898838898583999999
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.25 E-value=3.5e-12 Score=100.70 Aligned_cols=74 Identities=23% Similarity=0.277 Sum_probs=64.8
Q ss_pred CEEEECHH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHH
Q ss_conf 18874843--399999999654----998999969968977563099159944631888501467602798238999999
Q 002768 509 GFAGVFPE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 509 v~a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~ 582 (883)
.+..++|. .|...++.+++. .+.|.++|||.||.|||+.|+.|+||+||.+.+|+.||+++.+++..++..+|+
T Consensus 180 ~~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 180 GFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp TEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCEEEEECCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 26888458657778888776650214241899908844199998589189958998999984788818898459999999
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.22 E-value=8.4e-12 Score=98.03 Aligned_cols=74 Identities=28% Similarity=0.307 Sum_probs=64.6
Q ss_pred EEEECHH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHH
Q ss_conf 8874843--399999999654----9989999699689775630991599446318885014676027982389999999
Q 002768 510 FAGVFPE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLT 583 (883)
Q Consensus 510 ~a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~ 583 (883)
+..+.|. .|...++.+.++ ...++++|||.||.+||+.|+.|+||+||++.+|+.||+++.+++-.++.++|++
T Consensus 177 ~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 177 FADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 79997488999999999987322357551676588555999984890899589989999847978088875689999998
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.20 E-value=1.2e-10 Score=89.95 Aligned_cols=107 Identities=21% Similarity=0.164 Sum_probs=87.6
Q ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHHHHHHHHH
Q ss_conf 99999985898399982696899999999909998888987545887897891128999875491887484339999999
Q 002768 445 DTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEHKYEIVKI 524 (883)
Q Consensus 445 ~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~K~~iV~~ 524 (883)
..|+.++..|+.+.++||+....+...++++++.. ......+|...++.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~-------------------------------~~~~~~~K~~~l~~ 87 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL-------------------------------FFLGKLEKETACFD 87 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE-------------------------------EEESCSCHHHHHHH
T ss_pred HHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCCC-------------------------------CCCCCCCHHHHHHH
T ss_conf 88878765217899966984467899876321220-------------------------------11013638889999
Q ss_pred HHH----CCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHH-HHHHHH
Q ss_conf 965----4998999969968977563099159944631888501467602798238-999999
Q 002768 525 LQE----KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSV-IISAVL 582 (883)
Q Consensus 525 lq~----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~-i~~~i~ 582 (883)
+.+ ....|+++||+.||.|||+.|++|+||++|.+.+|++||+|+..++-.+ +.++++
T Consensus 88 ~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~nA~~~vk~~A~~Vt~~~GG~GavrE~~e 150 (177)
T d1k1ea_ 88 LMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVADAPIYVKNAVDHVLSTHGGKGAFREMSD 150 (177)
T ss_dssp HHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTSCHHHHTTSSEECSSCTTTTHHHHHHH
T ss_pred HHHHHCCCCCEEEEECCCCCHHHHHHHCCEEEECCCCCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 999866775225770588407899966892898488649999858999178899763999999
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.16 E-value=1.1e-10 Score=90.03 Aligned_cols=74 Identities=23% Similarity=0.338 Sum_probs=64.4
Q ss_pred CEEEECHH--HHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHH
Q ss_conf 18874843--399999999654----998999969968977563099159944631888501467602798238999999
Q 002768 509 GFAGVFPE--HKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 509 v~a~~~P~--~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~ 582 (883)
.+..++|. .|...++.+.+. ...|+++|||.||.|||+.|++|+||+||.+.+|+.||+++.+++..++.++|+
T Consensus 180 ~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 180 TYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp TEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEECCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 14565587775167899998860368220899808844099998689089948998999985898858887538999999
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.06 E-value=1.7e-10 Score=88.65 Aligned_cols=67 Identities=28% Similarity=0.323 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCC-HHHHHHHHH
Q ss_conf 3399999999654----998999969968977563099159944631888501467602798-238999999
Q 002768 516 EHKYEIVKILQEK----KHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPG-LSVIISAVL 582 (883)
Q Consensus 516 ~~K~~iV~~lq~~----g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~-~~~i~~~i~ 582 (883)
..|...++.+.+. ...|+++|||.||.+||+.|+.|+||+||.+.+|+.||+++..++ ..++..+++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEECCCCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 505778887766410020207996487636999985891899689989999848999998488869999999
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=5.9e-10 Score=84.92 Aligned_cols=125 Identities=19% Similarity=0.196 Sum_probs=89.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHCCCEEEECHH
Q ss_conf 9993379999999858983999826968999999999099988889875458878978-911289998754918874843
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDEN-EALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~v~a~~~P~ 516 (883)
+++|++.+.|+.|++.|++++++||.....+..+++.+|+....+-+..+... .+.. ... ........+.
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~-~~G~~~g~--------~~~~p~~~~~ 152 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFY-FNGEYAGF--------DETQPTAESG 152 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEEC-TTSCEEEE--------CTTSGGGSTT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEE-EHHCCCCC--------EEEEEEECCC
T ss_conf 04777999999997379979998999358888889870996100366553222-00000364--------2224652422
Q ss_pred HHHHHHHHHHHC--CCEEEEECCCCCCHHHHHHCCEEEEEC-C-CCHHHHHCCCEEECC
Q ss_conf 399999999654--998999969968977563099159944-6-318885014676027
Q 002768 517 HKYEIVKILQEK--KHVVGMTGDGVNDAPALKKADIGIAVA-D-ATDAARGAADIVLTE 571 (883)
Q Consensus 517 ~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~AdvGIa~~-~-~~~~ak~aADivl~~ 571 (883)
.|.++++.++++ ...+.++|||.||++|++.|+++||++ + .....++.||+++.+
T Consensus 153 ~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 153 GKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEECC
T ss_conf 08999999986348666389971786599898689219979877789999868998689
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.00 E-value=1.5e-10 Score=89.05 Aligned_cols=149 Identities=13% Similarity=0.075 Sum_probs=106.6
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+....+......+.+... ...-......+++..|+.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~-----~~~~~~~~~~~~~~k~~~ 149 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIH-----IDWPHSCKGTCSNQCGCC 149 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCE-----EECTTCCCTTCCSCCSSC
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCE-----ECCCCCCCCCCCCCCHHH
T ss_conf 424999999999985425311577530666999999809950145434798288102-----201013543255678999
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHC-CCEEECCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999654998999969968977563099159944631888501-4676027982389999999899999999
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGA-ADIVLTEPGLSVIISAVLTSRAIFQRMK 592 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~a-ADivl~~~~~~~i~~~i~~gR~~~~~i~ 592 (883)
|..+++.++..++.|.|+||+.||.+|++.||+++|++...+.+++. .+++ .-++|+.|...++.-..+.+.++
T Consensus 150 ~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~~~~ 224 (226)
T d2feaa1 150 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQEWLQ 224 (226)
T ss_dssp HHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHHHHT
T ss_pred HHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCEEEEECCHHHHHHHCCCCEE-ECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9999998467886389980763139999988997870646799998299836-24999999999999878999854
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.96 E-value=1.7e-09 Score=81.63 Aligned_cols=137 Identities=23% Similarity=0.204 Sum_probs=92.9
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECH
Q ss_conf 89999337999999985898399982696899999999909998888987545887897891128999875491887484
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFP 515 (883)
Q Consensus 436 ~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P 515 (883)
..++.+++.+.++.++..|..+.++||.....+....++.+....... .+........ .... .....+...+
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~-----~~~~~~~~~~ 144 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDGKLT-GDVE-----GEVLKENAKG 144 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETTEEE-EEEE-----CSSCSTTHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHHHHHHH--HHCCCCCCCC-CCCC-----CCCCCCCCCC
T ss_conf 000135599999999974987876326542222302220320466654--4211012221-2333-----2111123454
Q ss_pred HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHH
Q ss_conf 339999999965499899996996897756309915994463188850146760279823899999
Q 002768 516 EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 516 ~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i 581 (883)
.....+.+.++...+.+.++|||.||++|++.|++|||| ++.+..++.||+++..+++.+|...|
T Consensus 145 ~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 145 EILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred CHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCCEEE-CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 103357888466655417863784749999988987899-98999997499999179999999986
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.95 E-value=7e-09 Score=77.24 Aligned_cols=130 Identities=18% Similarity=0.177 Sum_probs=92.0
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
+..+.....++.+ ..+.+...+++.-...........++...... .+...... .........+..
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~------------~~~~~~~~~~~~ 133 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDDSD------------RVVGYQLRQKDP 133 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECTTS------------CEEEEECCSSSH
T ss_pred CCCCHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHHHCCCHHHCC--EEEEECCC------------CCCCCCCCCHHH
T ss_conf 5562488999886-04746888516713888899998478333311--02562144------------454321120145
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCCCHHHHHHHHHH
Q ss_conf 999999996549989999699689775630991599446318885014676027982389999999
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEPGLSVIISAVLT 583 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~~~~~i~~~i~~ 583 (883)
+...++.++...+.|+|+|||.||+|||+.|++||||+...++.++++|+++. .++..+..++..
T Consensus 134 ~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmna~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 134 KRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEESCCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCEEECCCHHHHHHCCCCEEE-CCHHHHHHHHHH
T ss_conf 78899986425652188438732799998589409978977999867895562-688999999999
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.90 E-value=1.1e-08 Score=75.96 Aligned_cols=54 Identities=20% Similarity=0.210 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHH-----CCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEE
Q ss_conf 339999999965-----499899996996897756309915994463188850146760
Q 002768 516 EHKYEIVKILQE-----KKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVL 569 (883)
Q Consensus 516 ~~K~~iV~~lq~-----~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl 569 (883)
..|...++.+.+ ....++++|||.||.+||+.|+.||+|+|+....++.+|.+.
T Consensus 178 ~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na~~~~~~~~~~i~ 236 (243)
T d1wzca1 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236 (243)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCCCTTCEEESCHH
T ss_pred HCCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
T ss_conf 10077999999983599914199984988589999849938992799868870231888
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.88 E-value=9.8e-09 Score=76.22 Aligned_cols=70 Identities=19% Similarity=0.146 Sum_probs=59.9
Q ss_pred CHHHHHHHHHHHHHCC----CEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCC-------EEECCCCHHHHHHHHH
Q ss_conf 8433999999996549----9899996996897756309915994463188850146-------7602798238999999
Q 002768 514 FPEHKYEIVKILQEKK----HVVGMTGDGVNDAPALKKADIGIAVADATDAARGAAD-------IVLTEPGLSVIISAVL 582 (883)
Q Consensus 514 ~P~~K~~iV~~lq~~g----~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aAD-------ivl~~~~~~~i~~~i~ 582 (883)
...+|...++.+.+.- ..+.++|||.||.+||+.|+.|++|+|+.+.+++.|| ++...++..++.++++
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCCEEEECCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHH
T ss_conf 76415577888877415773037997588877999961891899679999999986323666537718997148999999
Q ss_pred H
Q ss_conf 9
Q 002768 583 T 583 (883)
Q Consensus 583 ~ 583 (883)
+
T Consensus 239 ~ 239 (244)
T d1s2oa1 239 H 239 (244)
T ss_dssp H
T ss_pred H
T ss_conf 8
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.70 E-value=3.8e-07 Score=64.94 Aligned_cols=41 Identities=15% Similarity=0.062 Sum_probs=32.0
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 99933799999998589839998269689999999990999
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMA 478 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~ 478 (883)
.+.+.+.+++++++++|+.+.++||++...+....+.+|+.
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEECCCHHHCHHHHHHHCCC
T ss_conf 47999999999999779989999689736530688873457
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.09 E-value=8.4e-07 Score=62.44 Aligned_cols=59 Identities=22% Similarity=0.349 Sum_probs=49.0
Q ss_pred EEECH--HHHHHHHHHHHH-CCCEEEEECC----CCCCHHHHHHCC-EEEEECCCCHHHHHCCCEEE
Q ss_conf 87484--339999999965-4998999969----968977563099-15994463188850146760
Q 002768 511 AGVFP--EHKYEIVKILQE-KKHVVGMTGD----GVNDAPALKKAD-IGIAVADATDAARGAADIVL 569 (883)
Q Consensus 511 a~~~P--~~K~~iV~~lq~-~g~~v~~iGD----G~ND~~aLk~Ad-vGIa~~~~~~~ak~aADivl 569 (883)
-.++| -.|...++.|.+ ..+.|.++|| |.||.+||+.|+ .|+||+|+.|.+|..+|+++
T Consensus 177 lei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 177 FDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVSPQDTVQRCREIFF 243 (244)
T ss_dssp EEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSSHHHHHHHHHHHHC
T ss_pred CEECCHHCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCEEECCCHHHHHHHHHHHCC
T ss_conf 0320322027899999966984459998688999997299997179858991898999999998619
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.03 E-value=5.2e-06 Score=56.81 Aligned_cols=60 Identities=12% Similarity=0.175 Sum_probs=44.9
Q ss_pred EEEECH--HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCEEECCC
Q ss_conf 887484--339999999965499899996996897756309915994463188850146760279
Q 002768 510 FAGVFP--EHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADIVLTEP 572 (883)
Q Consensus 510 ~a~~~P--~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADivl~~~ 572 (883)
+..+.| .+|...++.+.+.. .++++||+.||.+|++.|+.|++|++|. .+.+|++.+.+.
T Consensus 150 ~idi~p~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~--~~~~A~~~~~~~ 211 (229)
T d1u02a_ 150 IIELRVPGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGE--GETHAKFHVADY 211 (229)
T ss_dssp EEEEECTTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESS--SCCCCSEEESSH
T ss_pred EEEEECCCCCHHHHHHHHHCCC-CCEEECCCCCHHHHHHCCCCEEEEEECC--CCCCCEEECCCH
T ss_conf 8997369898899999974404-4566438887099996028828999689--876672875999
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=97.92 E-value=1.7e-05 Score=53.09 Aligned_cols=121 Identities=17% Similarity=0.260 Sum_probs=87.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH---HHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHH
Q ss_conf 78894899999999701226784789999980890788---403607686358888741899999179929999749489
Q 002768 301 RNMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEA---RANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPE 377 (883)
Q Consensus 301 ~~~~~~~~l~~a~~~~~~~~~~~i~~ai~~~~~~~~~~---~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e 377 (883)
.+.+.++++.+|+.++...+ ||+..|++.++.+.... ..........+|....+...+.+ +|+ .+..|++.
T Consensus 11 ~G~~~~ell~~AA~aE~~Se-HPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~g~--~v~~G~~~ 84 (136)
T d2a29a1 11 QGVDEKTLADAAQLASLADE-TPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINI---DNR--MIRKGSVD 84 (136)
T ss_dssp TTCCHHHHHHHHHHHHHTCC-SHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEE---TTE--EEEEECHH
T ss_pred CCCCHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEE---CCE--EEEECHHH
T ss_conf 99999999999999727778-6689999999998558775531101244445432342588987---897--99966789
Q ss_pred HHHHHHHCC-HHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 998650042-899999999999998619937677540134456679999952776327889999
Q 002768 378 QILNLCKEK-KEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPLFDPPR 440 (883)
Q Consensus 378 ~Il~~~~~~-~~~~~~~~~~i~~~~~~G~R~l~~A~~~l~~~~~~~~e~~l~~lG~i~l~D~lr 440 (883)
.+...+... ......+.+.++++..+|.+++.++... +++|++++.|++|
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va~d~-------------~~~G~i~l~D~iK 135 (136)
T d2a29a1 85 AIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGS-------------RVLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHTCCCCHHHHHHHHHHHHTTSEEEEEEETT-------------EEEEEEEEEESSC
T ss_pred HHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEEEEECC
T ss_conf 99999997189880999999999997798599999999-------------9999999983058
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.89 E-value=0.00017 Score=45.95 Aligned_cols=133 Identities=13% Similarity=0.136 Sum_probs=81.9
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEE----
Q ss_conf 9999337999999985898399982696899999999909998888987545887897891128999875491887----
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG---- 512 (883)
Q Consensus 437 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~---- 512 (883)
-++|+++++.++.|++.|+++.++||--......+.+++|+..+.. .+..+.++...+ ....+
T Consensus 134 i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni---~I~sN~l~f~~~----------~~~~~~~~~ 200 (291)
T d2bdua1 134 VMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNV---KVVSNFMDFDEN----------GVLKGFKGE 200 (291)
T ss_dssp CCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTE---EEEEECEEECTT----------SBEEEECSS
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCC---EEEEEEEEEECC----------EEEEECCCC
T ss_conf 8766389999999997497089985873999999999829986574---699657997088----------268603478
Q ss_pred -ECHHHHHHHH----HHHH--HCCCEEEEECCCCCCHHHHHH---CCEEEEEC--CCC-----HHHHHCCCEEECCCCHH
Q ss_conf -4843399999----9996--549989999699689775630---99159944--631-----88850146760279823
Q 002768 513 -VFPEHKYEIV----KILQ--EKKHVVGMTGDGVNDAPALKK---ADIGIAVA--DAT-----DAARGAADIVLTEPGLS 575 (883)
Q Consensus 513 -~~P~~K~~iV----~~lq--~~g~~v~~iGDG~ND~~aLk~---AdvGIa~~--~~~-----~~ak~aADivl~~~~~~ 575 (883)
.....|...+ ...+ .....+.++|||+||.+|.+. ++..++.| +.. +.-.++=|+|+.++.--
T Consensus 201 ~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~ 280 (291)
T d2bdua1 201 LIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESL 280 (291)
T ss_dssp CCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBC
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCH
T ss_conf 64345686315445998853278676899967776899983885446324543137669987999876079788568784
Q ss_pred HHHHHHH
Q ss_conf 8999999
Q 002768 576 VIISAVL 582 (883)
Q Consensus 576 ~i~~~i~ 582 (883)
.++..|.
T Consensus 281 ~v~~~il 287 (291)
T d2bdua1 281 EVVNSIL 287 (291)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
T ss_conf 6899999
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.72 E-value=0.00014 Score=46.71 Aligned_cols=125 Identities=13% Similarity=0.167 Sum_probs=80.9
Q ss_pred CCCCCHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHH
Q ss_conf 99933799999998589-83999826968999999999099988889875458878978911289998754918874843
Q 002768 438 PPRHDSVDTIRRALNLG-VCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~G-i~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 516 (883)
++-|++.++++.|++.| +++.++|+.....+....+..|+..-. + .+..+.+... ..-.|+
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~f-d-~i~~~~~~~~----------------~k~~p~ 152 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYF-P-FGAFADDALD----------------RNELPH 152 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTC-S-CEECTTTCSS----------------GGGHHH
T ss_pred EECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCC-C-CCCCCCCCCC----------------CCCHHH
T ss_conf 106852888765411231122355788500000123320122222-2-2222233443----------------454157
Q ss_pred HHHHHHHHHHH---CCCEEEEECCCCCCHHHHHHCCEE---EEECCC--CHHHHHCCCEEECCCCHHHHHHHHH
Q ss_conf 39999999965---499899996996897756309915---994463--1888501467602798238999999
Q 002768 517 HKYEIVKILQE---KKHVVGMTGDGVNDAPALKKADIG---IAVADA--TDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 517 ~K~~iV~~lq~---~g~~v~~iGDG~ND~~aLk~AdvG---Ia~~~~--~~~ak~aADivl~~~~~~~i~~~i~ 582 (883)
--...++.+.. ..+.+.|+||+.+|+.|-+.|++. |+.|.. .+..+.-||+++ ++++.+...+.
T Consensus 153 ~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 153 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred HHHHHHHHHCCCCCCHHHHEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 7888765300248776680232487278999998499799980799998899658999998--99999999999
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.72 E-value=0.00018 Score=45.92 Aligned_cols=127 Identities=14% Similarity=0.118 Sum_probs=88.3
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHH
Q ss_conf 99993379999999858983999826968999999999099988889875458878978911289998754918874843
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 516 (883)
.++.+++.++++.|++.|+++.++|+.+......+.+..|+..-. ....+.+.+. ......|+
T Consensus 98 ~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f-~d~~~~~d~~----------------~~~KP~p~ 160 (257)
T d1swva_ 98 ASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK-PDFLVTPDDV----------------PAGRPYPW 160 (257)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC-CSCCBCGGGS----------------SCCTTSSH
T ss_pred CCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCC-CCCCCCCCCC----------------CCCCCCHH
T ss_conf 831775799999988502441101798356688889987640122-3344555432----------------22345817
Q ss_pred HHHHHHHHHHHC-CCEEEEECCCCCCHHHHHHCCEE-EEECCCCH---------------------------HHHHCCCE
Q ss_conf 399999999654-99899996996897756309915-99446318---------------------------88501467
Q 002768 517 HKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIG-IAVADATD---------------------------AARGAADI 567 (883)
Q Consensus 517 ~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~~---------------------------~ak~aADi 567 (883)
.-....+.+.-. .+.|.|+||..+|+.+=+.|++- |++..|.. ..+.-||+
T Consensus 161 ~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~ 240 (257)
T d1swva_ 161 MCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 240 (257)
T ss_dssp HHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 78999999589876518999687340899998799899981377778989899862799999999999999997479989
Q ss_pred EECCCCHHHHHHHHH
Q ss_conf 602798238999999
Q 002768 568 VLTEPGLSVIISAVL 582 (883)
Q Consensus 568 vl~~~~~~~i~~~i~ 582 (883)
++ +++.-+..+|.
T Consensus 241 vi--~~l~eL~~ii~ 253 (257)
T d1swva_ 241 TI--ETMQELESVME 253 (257)
T ss_dssp EE--SSGGGHHHHHH
T ss_pred EE--CCHHHHHHHHH
T ss_conf 98--79999999999
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.48 E-value=8.4e-05 Score=48.23 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=86.9
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHH
Q ss_conf 99993379999999858983999826968999999999099988889875458878978911289998754918874843
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 516 (883)
.++.|++++.++.|++.|+++.++|+.....+..+.+.+|+.... ..++...+.. .....|+
T Consensus 94 ~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f--~~~~~~~~~~----------------~~kp~p~ 155 (224)
T d2hsza1 94 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF--SEMLGGQSLP----------------EIKPHPA 155 (224)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC--SEEECTTTSS----------------SCTTSSH
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHC--CCCCCCCCCC----------------CCCCCCH
T ss_conf 016889999999985068742021345288999999864963421--4311233345----------------4432101
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCC----CHHHHHCCCEEECCCCHHHHHHHH
Q ss_conf 3999999996549989999699689775630991-5994463----188850146760279823899999
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADA----TDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~----~~~ak~aADivl~~~~~~~i~~~i 581 (883)
--..+.+.++-....+.|+||..+|..+-+.|++ .|.+..+ .+....-+|+++ ++++.++.++
T Consensus 156 ~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 156 PFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred HHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 3578998864311002021176989999999099599991799983406666999998--9999998863
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.47 E-value=0.00018 Score=45.78 Aligned_cols=119 Identities=15% Similarity=0.135 Sum_probs=83.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
++.|++.++++.|++.|+++.++|+.....+..+.+..|+..-. ..++.+.+. ..+...|+-
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F--~~i~~~~~~----------------~~~Kp~~~~ 149 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF--DALASAEKL----------------PYSKPHPQV 149 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEECTTS----------------SCCTTSTHH
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCC----------------CCCHHHHHH
T ss_conf 45632799988754034552213321000111222222333222--222232322----------------210145789
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEE-ECC--C-CHHHHHCCCEEECCCCHHH
Q ss_conf 999999996549989999699689775630991599-446--3-1888501467602798238
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VAD--A-TDAARGAADIVLTEPGLSV 576 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~~--~-~~~ak~aADivl~~~~~~~ 576 (883)
-....+.+.-..+.++|+||..+|+.|-+.|++... +.. . .+.....||+++. ++..
T Consensus 150 ~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~--~l~e 210 (218)
T d1te2a_ 150 YLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLS--SLTE 210 (218)
T ss_dssp HHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECS--CGGG
T ss_pred HHHHHHHCCCCCHHCEEEEECHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEEC--CHHH
T ss_conf 999999729995130899609899999998399799989987766622358999989--9266
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.07 E-value=0.0072 Score=34.45 Aligned_cols=124 Identities=18% Similarity=0.131 Sum_probs=83.2
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
+|.|++.++++.|+ .|+++.++|+..........+.+|+.... + .++...+ . ....-.|+-
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~f-d-~i~~s~~-----------~-----~~~KP~~~~ 160 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLF-D-SITTSEE-----------A-----GFFKPHPRI 160 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGC-S-EEEEHHH-----------H-----TBCTTSHHH
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCCCCCHHHHCCCCCCCCC-C-CCCCCCC-----------C-----CCCCHHHHH
T ss_conf 51006999998764-03760366213221101110123322100-2-2333322-----------2-----232213577
Q ss_pred HHHHHHHHHHCCCEEEEECCC-CCCHHHHHHCCEEEEE-C--CCCHHHHHCCCEEECCCCHHHHHHHHH
Q ss_conf 999999996549989999699-6897756309915994-4--631888501467602798238999999
Q 002768 518 KYEIVKILQEKKHVVGMTGDG-VNDAPALKKADIGIAV-A--DATDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG-~ND~~aLk~AdvGIa~-~--~~~~~ak~aADivl~~~~~~~i~~~i~ 582 (883)
=....+.+.-....++|+||. .+|+.+-+.|++.... . +........+|+++ ++++.+...++
T Consensus 161 ~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~ 227 (230)
T d1x42a1 161 FELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVD 227 (230)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE--CCHHHHHHHHH
T ss_conf 88777640664312645621748679999985998999889998701045899998--89999999999
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.92 E-value=0.0056 Score=35.22 Aligned_cols=132 Identities=18% Similarity=0.152 Sum_probs=79.2
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHH---------------HHHHHHHCCCCCCCC--CCCCCCCCCCCCCCCCCHH
Q ss_conf 99337999999985898399982696899---------------999999909998888--9875458878978911289
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAI---------------AKETGRRLGMATNMY--PSSSLLGRDKDENEALPVD 501 (883)
Q Consensus 439 lr~~~~~~I~~l~~~Gi~v~miTGD~~~~---------------a~~ia~~~gi~~~~~--~~~~l~~~~~~~~~~~~~~ 501 (883)
+-|++.++++.|+++|+++.++|...... ........|+..... +.....+...
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~--------- 98 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVE--------- 98 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSG---------
T ss_pred ECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCC---------
T ss_conf 88789999999866184166664220235566678765401012445555401344540565533346655---------
Q ss_pred HHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEE--EEECCC---CHHHHHCCCEEECCCCHHH
Q ss_conf 99875491887484339999999965499899996996897756309915--994463---1888501467602798238
Q 002768 502 ELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG--IAVADA---TDAARGAADIVLTEPGLSV 576 (883)
Q Consensus 502 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG--Ia~~~~---~~~ak~aADivl~~~~~~~ 576 (883)
...+...+..-.|.--..+.+.+.-..+.+.|+||..+|+.|=+.|+++ +.+..+ .+.....||+++ +++..
T Consensus 99 -~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~d 175 (182)
T d2gmwa1 99 -EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLAD 175 (182)
T ss_dssp -GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGG
T ss_pred -CCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEE--CCHHH
T ss_conf -333455556874322310122116553445122798999999998288847998999777721024798898--99999
Q ss_pred HHHHHH
Q ss_conf 999999
Q 002768 577 IISAVL 582 (883)
Q Consensus 577 i~~~i~ 582 (883)
+++.|+
T Consensus 176 l~~~ik 181 (182)
T d2gmwa1 176 LPQAIK 181 (182)
T ss_dssp HHHHHH
T ss_pred HHHHHC
T ss_conf 999963
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.84 E-value=0.00053 Score=42.51 Aligned_cols=120 Identities=11% Similarity=0.018 Sum_probs=81.0
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
++.+++.+.++.++..+ ++.++|+.....+..+.+.+|+.... ..++.+.+ .....|+.
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~f--d~v~~~~~------------------~~~~~p~~ 142 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFF--DGIYGSSP------------------EAPHKADV 142 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGC--SEEEEECS------------------SCCSHHHH
T ss_pred CCHHHHHHHHHHHHCCC-CHHHCCCCCCHHHHHHHHHHCCCCCC--CCCCCCCC------------------CCCCCCCC
T ss_conf 21068999875420134-10000233210115778750123320--00022232------------------22223332
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECC---C-CHHHHHCCCEEECCCCHHHHHHH
Q ss_conf 999999996549989999699689775630991-599446---3-18885014676027982389999
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVAD---A-TDAARGAADIVLTEPGLSVIISA 580 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~---~-~~~ak~aADivl~~~~~~~i~~~ 580 (883)
...+.+.++-..+.+.|+||+.+|+.|-+.|++ .|++.. . .+.....+|+++ +++.-+...
T Consensus 143 ~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~ 208 (210)
T d2ah5a1 143 IHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAY 208 (210)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHH
T ss_pred CCHHHHHHHCCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHH
T ss_conf 110123320120016465477789999998599399985798997789768999998--999999998
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.00027 Score=44.64 Aligned_cols=49 Identities=20% Similarity=0.335 Sum_probs=36.4
Q ss_pred HHHHHHHHHHH-CCCEEEEECC----CCCCHHHHHHCC-EEEEECCCCHHHHHCCC
Q ss_conf 39999999965-4998999969----968977563099-15994463188850146
Q 002768 517 HKYEIVKILQE-KKHVVGMTGD----GVNDAPALKKAD-IGIAVADATDAARGAAD 566 (883)
Q Consensus 517 ~K~~iV~~lq~-~g~~v~~iGD----G~ND~~aLk~Ad-vGIa~~~~~~~ak~aAD 566 (883)
+|...++.+.+ ..+.++++|| |.||.+||+.|+ .|+++++..+. +..++
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~~~~~-~~~~~ 239 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTAPEDT-RRICE 239 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSSHHHH-HHHHH
T ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEECCHHHH-HHHHH
T ss_conf 78999999848993629998689999997699997159729990799999-99999
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.70 E-value=0.0029 Score=37.23 Aligned_cols=120 Identities=15% Similarity=0.016 Sum_probs=80.3
Q ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEE
Q ss_conf 78899993379999999858983999826968999999999099988889875458878978911289998754918874
Q 002768 434 PLFDPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 434 ~l~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~ 513 (883)
...-.+.||+.+.+++|++.|+++.++|+............+|+..-.. .......+ ......
T Consensus 123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~-~~~~~~d~----------------~~~~KP 185 (253)
T d1zs9a1 123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILE-LVDGHFDT----------------KIGHKV 185 (253)
T ss_dssp SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGG-GCSEEECG----------------GGCCTT
T ss_pred HCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHH-HCCEEECC----------------CCCCCC
T ss_conf 1136668878999999864247544458984889999999728404332-02333024----------------533577
Q ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEE----CCC-CHHHHHCCCEEEC
Q ss_conf 84339999999965499899996996897756309915994----463-1888501467602
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV----ADA-TDAARGAADIVLT 570 (883)
Q Consensus 514 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~----~~~-~~~ak~aADivl~ 570 (883)
.|+-=....+.+.-..+.++|+||..+|+.+-++|++.... ++. .......++.++.
T Consensus 186 ~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~ 247 (253)
T d1zs9a1 186 ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT 247 (253)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES
T ss_pred CCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCEEC
T ss_conf 80888999999489967489994799999999985997999968998998634457881799
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.32 E-value=0.0034 Score=36.73 Aligned_cols=119 Identities=14% Similarity=0.051 Sum_probs=77.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
++.|++.++++.|++.|+++.++|+... .+..+.++.|+.... ..++...+. ....-.|+-
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f--~~i~~s~~~----------------~~~Kp~~~~ 142 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF--TEILTSQSG----------------FVRKPSPEA 142 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE--EEEECGGGC----------------CCCTTSSHH
T ss_pred CCCCHHHHHHHCCCCCCCCHHHHCCCCH-HHHHHHHHCCCCCCC--CCCCCCCCC----------------CCCCHHHHH
T ss_conf 4563477654211022220022113510-334433310122122--222222234----------------432025788
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEE-EECCCCHHHHHCCCEEECCCCHHHHHHHH
Q ss_conf 99999999654998999969968977563099159-94463188850146760279823899999
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVADATDAARGAADIVLTEPGLSVIISAV 581 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI-a~~~~~~~ak~aADivl~~~~~~~i~~~i 581 (883)
-..+.+.+.-..+.+.|+||+.+|..+-+.|++.. ++..+.. .+|..+ +++..+...+
T Consensus 143 ~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~----~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 143 ATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTY----EGNHRI--QALADISRIF 201 (204)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSC----TTEEEC--SSTTHHHHHT
T ss_pred HHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCC----CCCEEC--CCHHHHHHHH
T ss_conf 8999998299975189994798999999986996999847999----958004--8998999986
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.30 E-value=0.015 Score=32.16 Aligned_cols=124 Identities=10% Similarity=0.074 Sum_probs=81.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
++.|++.++++.|+ .|+++.++|+.+........+.+|+.... ..++...+. ....-.|+-
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~f--d~i~~s~~~----------------~~~KP~p~~ 169 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYF--DAIVIGGEQ----------------KEEKPAPSI 169 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGC--SEEEEGGGS----------------SSCTTCHHH
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCCHHHHHHHHHCCCCCCC--CCCCCCCCC----------------CCCHHHHHH
T ss_conf 65834899999841-14606886223200123333202222222--222322222----------------210033324
Q ss_pred HHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCEE-EEEC--CC--CHHHHHCCCEEECCCCHHHHHHHHH
Q ss_conf 9999999965499899996996-897756309915-9944--63--1888501467602798238999999
Q 002768 518 KYEIVKILQEKKHVVGMTGDGV-NDAPALKKADIG-IAVA--DA--TDAARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~AdvG-Ia~~--~~--~~~ak~aADivl~~~~~~~i~~~i~ 582 (883)
=..+.+.+.-..+.+.|+||.. +|+.+-+.|++. +..- .+ .......+|+++ +++..+..+++
T Consensus 170 ~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~ 238 (247)
T d2gfha1 170 FYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQ 238 (247)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHH
T ss_pred HHHHHHHHHCCHHHCCEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHH
T ss_conf 7889999602877524203571867999998399499997799887643357999898--99999999999
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.01 E-value=0.0067 Score=34.67 Aligned_cols=91 Identities=18% Similarity=0.242 Sum_probs=64.1
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCC----HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEEC
Q ss_conf 99337999999985898399982696----89999999990999888898754588789789112899987549188748
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQ----LAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVF 514 (883)
Q Consensus 439 lr~~~~~~I~~l~~~Gi~v~miTGD~----~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~ 514 (883)
|.+++.+.++.+++.|++|..+||+. ..|+++.-+.+|+.........+.+.+. .
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~---------------------~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKP---------------------G 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCT---------------------T
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCC---------------------C
T ss_conf 6624999999999759749999388456579999999987198745666347617999---------------------8
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEE
Q ss_conf 433999999996549989999699689775630991-5994
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAV 554 (883)
Q Consensus 515 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~ 554 (883)
...|.+.++. ..+++++||..+|..+-+.|++ +|.+
T Consensus 146 K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 146 QNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp CCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHHHH----CCEEEEECCCHHHHHHHHHCCCCCEEE
T ss_conf 2379999997----496899659888876798759983575
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.01 E-value=0.0081 Score=34.09 Aligned_cols=95 Identities=9% Similarity=-0.008 Sum_probs=65.7
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEE--EC
Q ss_conf 999337999999985898399982696-899999999909998888987545887897891128999875491887--48
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQ-LAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAG--VF 514 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~-~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~--~~ 514 (883)
++.|++.+.++.|++.|+++.++|+.+ ...+...-+..++.... .. +... -.
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~--~~-----------------------~~~~~kp~ 100 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF--IQ-----------------------REIYPGSK 100 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC--SE-----------------------EEESSSCH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHCCCCCCCC--EE-----------------------EECCCCCC
T ss_conf 605579999999997899489973566210100000002333321--02-----------------------32266897
Q ss_pred HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEE-EECCC
Q ss_conf 43399999999654998999969968977563099159-94463
Q 002768 515 PEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGI-AVADA 557 (883)
Q Consensus 515 P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGI-a~~~~ 557 (883)
|+.-.++.+.+.-..+.+.|+||..+|+.+-++|++-. .+..|
T Consensus 101 ~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v~~G 144 (164)
T d1u7pa_ 101 VTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDG 144 (164)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECSSC
T ss_pred HHHHHHHHHHHCCCHHHEEEECCCHHHHHHHHHCCCEEEEECCC
T ss_conf 69999999996888699798748787899999869979997999
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.79 E-value=0.0023 Score=38.00 Aligned_cols=119 Identities=10% Similarity=0.053 Sum_probs=79.4
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
++.|++.+.++.|++ ++++.++|+.....+..+.++.|+.... ..+..+.+. ....-.|+-
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f--~~i~~~~~~----------------~~~KP~p~~ 142 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM--AVTISADDT----------------PKRKPDPLP 142 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE--EEEECGGGS----------------SCCTTSSHH
T ss_pred CCCCCHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCC----------------CCCHHHHHH
T ss_conf 346403444332014-5542000232111111111222222222--222222222----------------221034443
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEE---CCCCHHHHHCCCEEECCCCHHHH
Q ss_conf 9999999965499899996996897756309915994---46318885014676027982389
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAV---ADATDAARGAADIVLTEPGLSVI 577 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~---~~~~~~ak~aADivl~~~~~~~i 577 (883)
-..+.+.++-..+.+.|+||..+|+.+-+.|++.... |..+....+.+|+++ .++.-+
T Consensus 143 ~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dl 203 (207)
T d2hdoa1 143 LLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDI 203 (207)
T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGG
T ss_pred HCCCCCCEEEECCCEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCEE--CCHHHH
T ss_conf 0023421045113406854778789999984992999935889756765329274--899999
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.76 E-value=0.011 Score=33.05 Aligned_cols=109 Identities=15% Similarity=0.025 Sum_probs=71.4
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
++.+++++.++.+++.|+++.++|+...... +..+.+|+.... ..++.+.+.. .....|+-
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~f--d~i~~~~~~~----------------~~KP~p~~ 139 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYF--TEVVTSSSGF----------------KRKPNPES 139 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGE--EEEECGGGCC----------------CCTTSCHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH-HHHHHHCCCCCC--CCCCCCCCCC----------------CCCCCHHH
T ss_conf 0244268888877764212233455762101-345542022122--2212222234----------------56888999
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCHHHHHCCCE
Q ss_conf 99999999654998999969968977563099159944631888501467
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVADATDAARGAADI 567 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa~~~~~~~ak~aADi 567 (883)
-....+.+. .+.+.++||..+|+.+-+.|++-...-++....++..|+
T Consensus 140 ~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~i~v~~~~~~~~~~d~ 187 (187)
T d2fi1a1 140 MLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDTHLFTSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEEEECSCHHHHHHHHTC
T ss_pred HHHHHHHCC--CCCEEEEECCHHHHHHHHHCCCEEEEECCCCCHHHHCCC
T ss_conf 999999849--997699907999999999859979999998874753579
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.52 E-value=0.051 Score=28.39 Aligned_cols=140 Identities=19% Similarity=0.162 Sum_probs=89.3
Q ss_pred CCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHCCC-------
Q ss_conf 993379999999858983999826968999999999099988889875458878978--91128999875491-------
Q 002768 439 PRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDEN--EALPVDELIEEADG------- 509 (883)
Q Consensus 439 lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~v------- 509 (883)
+-||+.++++.+++.= ...++|---..-..++++..|+..+.+.. .-++|.. ...+.++++...++
T Consensus 82 lvpgA~~~lk~l~~~m-~~yIvSTSY~qyi~al~~~~gfp~e~~~T----~~~lD~~~~p~ee~e~ll~i~~~~~d~~~e 156 (308)
T d1y8aa1 82 FVPDAEKAMATLQERW-TPVVISTSYTQYLRRTASMIGVRGELHGT----EVDFDSIAVPEGLREELLSIIDVIASLSGE 156 (308)
T ss_dssp BCTTHHHHHHHHHTTC-EEEEEEEEEHHHHHHHHHHTTCCSEEEEE----BCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred ECCCHHHHHHHHHHHC-CCEEEECCHHHHHHHHHHHCCCCCEEECC----CCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
T ss_conf 2688899999998648-84798535899999998535887401002----344312478717799998876530375377
Q ss_pred ---------EE------------EECHHHHHHHHHHHHHC--CCEEEEECCCCCCHHHHHHCCE--EEEEC-CCCHHHHH
Q ss_conf ---------88------------74843399999999654--9989999699689775630991--59944-63188850
Q 002768 510 ---------FA------------GVFPEHKYEIVKILQEK--KHVVGMTGDGVNDAPALKKADI--GIAVA-DATDAARG 563 (883)
Q Consensus 510 ---------~a------------~~~P~~K~~iV~~lq~~--g~~v~~iGDG~ND~~aLk~Adv--GIa~~-~~~~~ak~ 563 (883)
|. .+-...|..+++..-+. -..-+++||.+.|..||+.|.= |+|++ ||.+-+-.
T Consensus 157 el~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Yal~ 236 (308)
T d1y8aa1 157 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYALK 236 (308)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHHHT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCC
T ss_conf 88999998713115766876402147851678998633612698641236753327899997447983688568624445
Q ss_pred CCCEEECCCCHHHHHHHHHH
Q ss_conf 14676027982389999999
Q 002768 564 AADIVLTEPGLSVIISAVLT 583 (883)
Q Consensus 564 aADivl~~~~~~~i~~~i~~ 583 (883)
.||+.+.+++...+...+..
T Consensus 237 eA~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 237 HADVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp TCSEEEECSSTHHHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHH
T ss_conf 34468966633578899999
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.31 E-value=0.058 Score=28.01 Aligned_cols=67 Identities=27% Similarity=0.261 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCE-EEEECCC--C-HHHHH---CCCEEECCCCHHHHHHHHH
Q ss_conf 84339999999965499899996996-89775630991-5994463--1-88850---1467602798238999999
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADI-GIAVADA--T-DAARG---AADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 514 ~P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~Adv-GIa~~~~--~-~~ak~---aADivl~~~~~~~i~~~i~ 582 (883)
.|.--....+.+.-..+.++|+||.. +|+.+-+.|++ +|.+..| + +.... .+|+++ +++..+.++|+
T Consensus 187 ~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l~ 261 (261)
T d1vjra_ 187 NPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAVQ 261 (261)
T ss_dssp STHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHHC
T ss_pred CHHHHHHHHHHHCCCCHHCCEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEE--CCHHHHHHHHC
T ss_conf 5788888876640472211031687167899999879969998989998778863689998998--89999999769
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.96 E-value=0.017 Score=31.86 Aligned_cols=112 Identities=7% Similarity=0.006 Sum_probs=72.8
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHH
Q ss_conf 99993379999999858983999826968999999999099988889875458878978911289998754918874843
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 516 (883)
.++-|++.+.++.|++.|+++.++|+... +....+..|+.... ..++.+.+. ....-.|+
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f--~~i~~~~~~----------------~~~KP~~~ 149 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYF--DAIADPAEV----------------AASKPAPD 149 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGC--SEECCTTTS----------------SSCTTSTH
T ss_pred CCCCCCCEECCCCCCCCCCCEEEEEECCH--HHHHHHHHCCCCCC--CCCCCCCCC----------------CCCCCCHH
T ss_conf 20258740102212224442489963231--35788763566433--311111111----------------11235758
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCHHHHHCCCEEEC
Q ss_conf 3999999996549989999699689775630991-59944631888501467602
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADATDAARGAADIVLT 570 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~ak~aADivl~ 570 (883)
-=....+.++-..+.+.|+||..+|+.+-+.|++ .|+++.+. ....++.++.
T Consensus 150 ~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~--~~~~~~~~~~ 202 (221)
T d1o08a_ 150 IFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE--DLGDDIVIVP 202 (221)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH--HHCSSSEEES
T ss_pred HHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCHH--HCCCCCEECC
T ss_conf 8888898739887407999669888999998699899999811--2465647758
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=94.84 E-value=0.062 Score=27.78 Aligned_cols=133 Identities=18% Similarity=0.083 Sum_probs=68.3
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC--------HH-------HHHHHHHHCCCCCCCCC--CCCCCCCCCCCCCCCCH
Q ss_conf 999337999999985898399982696--------89-------99999999099988889--87545887897891128
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQ--------LA-------IAKETGRRLGMATNMYP--SSSLLGRDKDENEALPV 500 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~--------~~-------~a~~ia~~~gi~~~~~~--~~~l~~~~~~~~~~~~~ 500 (883)
.+-|++.+++++|+++|+++.++|... .. ...+.-+..|+...... ...-.+.......
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~---- 123 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIP---- 123 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCS----
T ss_pred EECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC----
T ss_conf 7634489999999862975798616543214454243444433677777664135532588742464456642123----
Q ss_pred HHHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCHHHHHCCCEEECC-CCHHHHH
Q ss_conf 99987549188748433999999996549989999699689775630991-599446318885014676027-9823899
Q 002768 501 DELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADATDAARGAADIVLTE-PGLSVII 578 (883)
Q Consensus 501 ~~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~ak~aADivl~~-~~~~~i~ 578 (883)
...+..-.|.--.+..+.+.-....+.|+||..+|+.|=+.|++ +|.+..+.... ..+..... .++..+.
T Consensus 124 ------~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~~--~~~~~~~~~~~~~e~~ 195 (209)
T d2o2xa1 124 ------DHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAV--QPGFAIRPLRDSSELG 195 (209)
T ss_dssp ------SCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEE--ETTEEEEEESSHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCCC--CCCCCCCCCCCHHHHH
T ss_conf ------66402432015667677738994126895797889999998799489994899765--6775546763052787
Q ss_pred HHHH
Q ss_conf 9999
Q 002768 579 SAVL 582 (883)
Q Consensus 579 ~~i~ 582 (883)
.++.
T Consensus 196 dll~ 199 (209)
T d2o2xa1 196 DLLA 199 (209)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=94.73 E-value=0.03 Score=30.09 Aligned_cols=60 Identities=15% Similarity=0.047 Sum_probs=38.8
Q ss_pred EECHHHHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCE-EEEECCC--CHHHH----HCCCEEECC
Q ss_conf 74843399999999654998999969968-9775630991-5994463--18885----014676027
Q 002768 512 GVFPEHKYEIVKILQEKKHVVGMTGDGVN-DAPALKKADI-GIAVADA--TDAAR----GAADIVLTE 571 (883)
Q Consensus 512 ~~~P~~K~~iV~~lq~~g~~v~~iGDG~N-D~~aLk~Adv-GIa~~~~--~~~ak----~aADivl~~ 571 (883)
.-.|+--..+.+.+.-..+.++|+||..+ |+.+-++|++ +|.+..| +.... ..+|+++.+
T Consensus 176 KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~~s 243 (250)
T d2c4na1 176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred CCHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 42046676666663278034578468727799999987998999899999988997378999999899
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.69 E-value=0.004 Score=36.24 Aligned_cols=58 Identities=17% Similarity=0.103 Sum_probs=38.4
Q ss_pred ECHHHHHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCE-EEEECCC---C---HHHHHCCCEEEC
Q ss_conf 484339999999965499899996996-89775630991-5994463---1---888501467602
Q 002768 513 VFPEHKYEIVKILQEKKHVVGMTGDGV-NDAPALKKADI-GIAVADA---T---DAARGAADIVLT 570 (883)
Q Consensus 513 ~~P~~K~~iV~~lq~~g~~v~~iGDG~-ND~~aLk~Adv-GIa~~~~---~---~~ak~aADivl~ 570 (883)
-.|+--....+.+.-....++|+||+. +|+.|-+.|++ +|.|.+| . ..+...+|+++.
T Consensus 181 P~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~ 246 (253)
T d1yv9a1 181 PKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 246 (253)
T ss_dssp TSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred CCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEEC
T ss_conf 312678789998488844237843782779999998799899989899997889736899978979
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.68 E-value=0.1 Score=26.27 Aligned_cols=104 Identities=16% Similarity=0.209 Sum_probs=67.3
Q ss_pred CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCEEEEEEECCCCCEEEEECCCHHHHHH
Q ss_conf 88948999999997012267847899999808907884036076863588887418999991799299997494899986
Q 002768 302 NMDKDMIVLLAARAARLENQDAIDAAIINMLADPKEARANIKEVHFLPFNPVDKRTAITYIDSDGNWYRASKGAPEQILN 381 (883)
Q Consensus 302 ~~~~~~~l~~a~~~~~~~~~~~i~~ai~~~~~~~~~~~~~~~~l~~~pF~~~~k~~sv~~~~~~g~~~~~~KGa~e~Il~ 381 (883)
+.++++++.+++..+. .+.||+..|++.++.+..............|-.. +. |+. +.-|.++.+.+
T Consensus 9 ~~~e~elL~~aaslE~-~S~HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~G------i~-----g~~--v~vG~~~~~~~ 74 (113)
T d2b8ea2 9 NGDERELLRLAAIAER-RSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEG------VV-----ADG--ILVGNKRLMED 74 (113)
T ss_dssp SSCHHHHHHHHHHHTT-TCCSHHHHHHHHHHHTTTCCCCCCSCEEEETTTE------EE-----ETT--EEEECHHHHHH
T ss_pred CCCHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCE------EE-----EEE--EEECCHHHHHH
T ss_conf 9999999999999877-6878239999999998057877632316631633------78-----689--99776887776
Q ss_pred HHHCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCC
Q ss_conf 500428999999999999986199376775401344566799999527763278
Q 002768 382 LCKEKKEIAVKVHTIIDKFAERGLRSLAVAIQEVSEMTKESPGGPWTFCGLLPL 435 (883)
Q Consensus 382 ~~~~~~~~~~~~~~~i~~~~~~G~R~l~~A~~~l~~~~~~~~e~~l~~lG~i~l 435 (883)
.... ..+.+.+.++.+..+|..++.++..+ +++|++++
T Consensus 75 ~~~~---~~~~~~~~~~~~~~~G~T~v~va~d~-------------~~~G~ial 112 (113)
T d2b8ea2 75 FGVA---VSNEVELALEKLEREAKTAVIVARNG-------------RVEGIIAV 112 (113)
T ss_dssp TTCC---CCHHHHHHHHHHHTTTCEEEEEEETT-------------EEEEEEEE
T ss_pred CCCC---CCHHHHHHHHHHHHCCCEEEEEEECC-------------EEEEEEEE
T ss_conf 0998---89899999999986799599999999-------------99999997
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.56 E-value=0.076 Score=27.19 Aligned_cols=96 Identities=14% Similarity=0.003 Sum_probs=59.6
Q ss_pred CCCCCCCHHHHHHHHHHCCCEEEEECCCCHH----HHHHHHH------H-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 8999933799999998589839998269689----9999999------9-099988889875458878978911289998
Q 002768 436 FDPPRHDSVDTIRRALNLGVCVKMITGDQLA----IAKETGR------R-LGMATNMYPSSSLLGRDKDENEALPVDELI 504 (883)
Q Consensus 436 ~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~----~a~~ia~------~-~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~ 504 (883)
+++|.|++.+.++.+++.|.++.++||.... +...+.. . .+... ..+....
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~-----~~~~~~~------------- 95 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPL-----VMQCQRE------------- 95 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCC-----SEEEECC-------------
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCE-----EEEECCC-------------
T ss_conf 0844878999999998444808999268578899999999997501333579867-----9863255-------------
Q ss_pred HHCCCEEEECHHHHHHHHHHHHHC-CCEEEEECCCCCCHHHHHHCCEEE
Q ss_conf 754918874843399999999654-998999969968977563099159
Q 002768 505 EEADGFAGVFPEHKYEIVKILQEK-KHVVGMTGDGVNDAPALKKADIGI 552 (883)
Q Consensus 505 ~~~~v~a~~~P~~K~~iV~~lq~~-g~~v~~iGDG~ND~~aLk~AdvGI 552 (883)
..-.+-.+..|..+.+.+... ..+++|+||...|+.|.+++++-.
T Consensus 96 ---~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~ 141 (149)
T d1ltqa1 96 ---QGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 141 (149)
T ss_dssp ---TTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ---CCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCCE
T ss_conf ---5566770487899999732577755999869789999999879968
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=94.24 E-value=0.031 Score=29.94 Aligned_cols=123 Identities=9% Similarity=0.058 Sum_probs=84.4
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHH
Q ss_conf 99993379999999858983999826968999999999099988889875458878978911289998754918874843
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 516 (883)
..+.+++.++++.+++.|+++.++|+-.........+..++.... ..++...+. ......|+
T Consensus 92 ~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~f--d~~~~s~~~----------------~~~KP~p~ 153 (220)
T d1zrna_ 92 LAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGF--DHLLSVDPV----------------QVYKPDNR 153 (220)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEESGGG----------------TCCTTSHH
T ss_pred CCCCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCC--CCEEEEEEE----------------ECCCCHHH
T ss_conf 221201078999887517857764211799999987411445532--100222100----------------01450778
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEE-EC---CCCHHHHHCCCEEECCCCHHHHHH
Q ss_conf 3999999996549989999699689775630991599-44---631888501467602798238999
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VA---DATDAARGAADIVLTEPGLSVIIS 579 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~---~~~~~ak~aADivl~~~~~~~i~~ 579 (883)
-=....+.+.-....++|+||..+|+.+-+.|++--+ +. ...+.....+|+++ +++..+.+
T Consensus 154 ~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~ 218 (220)
T d1zrna_ 154 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVE 218 (220)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHT
T ss_pred HHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHH
T ss_conf 899999981778714899804837699999869979998179987643368999998--99999985
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.80 E-value=0.085 Score=26.83 Aligned_cols=109 Identities=11% Similarity=0.041 Sum_probs=69.5
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCC----CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEE
Q ss_conf 99933799999998589839998269----68999999999099988889875458878978911289998754918874
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGD----QLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD----~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~ 513 (883)
.+.+++.+.++.|+++|+++.++|+- ............|+..-. + .++...+ .....-
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f-d-~i~~s~~----------------~~~~KP 158 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF-D-FLIESCQ----------------VGMIKP 158 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC-S-EEEEHHH----------------HSCCTT
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHH-C-EEEEHHH----------------CCCCCC
T ss_conf 888009999999986599457752011111899999998746807551-1-1000544----------------137799
Q ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCHHHHHC
Q ss_conf 8433999999996549989999699689775630991-59944631888501
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADATDAARGA 564 (883)
Q Consensus 514 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~ak~a 564 (883)
.|+--....+.++-..+.+.|+||..+|+.+-+.|++ +|.+.++.+...+.
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~~~~~el 210 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTASALREL 210 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSSHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCCCHHHHHH
T ss_conf 8277778888728986328999779887999998599899989940489999
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.60 E-value=0.088 Score=26.73 Aligned_cols=125 Identities=10% Similarity=0.050 Sum_probs=77.9
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHHH
Q ss_conf 99933799999998589839998269689999999990999888898754588789789112899987549188748433
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPEH 517 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~~ 517 (883)
.+.+++.+.+++++ .+..++|+.....+...-+++|+..... .....+.+.. ...+.-.|+.
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~-~~~~~~~~~~--------------~~~~KP~~~~ 146 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFA-PHIYSAKDLG--------------ADRVKPKPDI 146 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTT-TCEEEHHHHC--------------TTCCTTSSHH
T ss_pred CHHHHHHHHHHHCC---CCCEEEEECCHHHHHHHHCCCCCCCCCC-EEECCCCCCC--------------CCCCCCCHHH
T ss_conf 11345788765103---2322564120455555430234443321-0001232112--------------4434458899
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEE-EEECCCC-------H-HHHHCCCEEECCCCHHHHHHHHH
Q ss_conf 9999999965499899996996897756309915-9944631-------8-88501467602798238999999
Q 002768 518 KYEIVKILQEKKHVVGMTGDGVNDAPALKKADIG-IAVADAT-------D-AARGAADIVLTEPGLSVIISAVL 582 (883)
Q Consensus 518 K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvG-Ia~~~~~-------~-~ak~aADivl~~~~~~~i~~~i~ 582 (883)
=....+.+.-..+.+.|+||..+|+.+=+.|++- |++.++. + ....-||+++ +++..+..++.
T Consensus 147 ~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 147 FLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp HHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred HHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 9877875089873289975878789999984998999836987875317789767999999--99999999999
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.46 E-value=0.06 Score=27.90 Aligned_cols=60 Identities=25% Similarity=0.217 Sum_probs=42.7
Q ss_pred EEECHHHHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCE-EEEECCC---CHHHHHC---CCEEEC
Q ss_conf 874843399999999654998999969968-9775630991-5994463---1888501---467602
Q 002768 511 AGVFPEHKYEIVKILQEKKHVVGMTGDGVN-DAPALKKADI-GIAVADA---TDAARGA---ADIVLT 570 (883)
Q Consensus 511 a~~~P~~K~~iV~~lq~~g~~v~~iGDG~N-D~~aLk~Adv-GIa~~~~---~~~ak~a---ADivl~ 570 (883)
..-+|+--..+.+.+.-..+.++|+||..+ |+.+-++|++ +|.+..| .+...+. +|+++.
T Consensus 179 gKP~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~ 246 (253)
T d1wvia_ 179 GKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLS 246 (253)
T ss_dssp STTSHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEES
T ss_pred CCCCCCCCEEHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEEC
T ss_conf 16774200110011034545169982780777999998799799989899997888636899988989
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=91.65 E-value=0.29 Score=23.04 Aligned_cols=124 Identities=15% Similarity=0.135 Sum_probs=81.9
Q ss_pred CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEECHH
Q ss_conf 99993379999999858983999826968999999999099988889875458878978911289998754918874843
Q 002768 437 DPPRHDSVDTIRRALNLGVCVKMITGDQLAIAKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGVFPE 516 (883)
Q Consensus 437 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~~P~ 516 (883)
.++-+++.+++++++ ++.+.++|..+...+...-+..|+.... ..++.+.+. ....-.|+
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f--d~v~~s~~~----------------~~~KP~p~ 151 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF--DAVISVDAK----------------RVFKPHPD 151 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC--SEEEEGGGG----------------TCCTTSHH
T ss_pred CCCCHHHHHHHHHHH--HHCEEEEECCCHHHHHHHHHHCCCCCCC--CCCCCCCCC----------------CCCCCCHH
T ss_conf 663102367888875--3012677415247788887530222222--222322222----------------34686389
Q ss_pred HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEE-EC-CCCH-------------------------HHHHCCCEEE
Q ss_conf 3999999996549989999699689775630991599-44-6318-------------------------8850146760
Q 002768 517 HKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA-VA-DATD-------------------------AARGAADIVL 569 (883)
Q Consensus 517 ~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa-~~-~~~~-------------------------~ak~aADivl 569 (883)
-=....+.+.-..+.+.++||..+|+.+=+.|++--. +. .+.+ .....+|+++
T Consensus 152 ~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i 231 (245)
T d1qq5a_ 152 SYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV 231 (245)
T ss_dssp HHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE
T ss_pred HHHHHHHHHCCCHHHEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 99999999197843389993899999999986992999847886542212244434540121100003554258999998
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 2798238999999
Q 002768 570 TEPGLSVIISAVL 582 (883)
Q Consensus 570 ~~~~~~~i~~~i~ 582 (883)
+++..++.+|+
T Consensus 232 --~~l~el~~lv~ 242 (245)
T d1qq5a_ 232 --PALGDLPRLVR 242 (245)
T ss_dssp --SSGGGHHHHHH
T ss_pred --CCHHHHHHHHH
T ss_conf --99999999998
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.54 E-value=0.25 Score=23.55 Aligned_cols=105 Identities=11% Similarity=0.028 Sum_probs=62.2
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCHHH----HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEE
Q ss_conf 999337999999985898399982696899----9999999099988889875458878978911289998754918874
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQLAI----AKETGRRLGMATNMYPSSSLLGRDKDENEALPVDELIEEADGFAGV 513 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~~----a~~ia~~~gi~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v~a~~ 513 (883)
.+.+++.+.++.|++.|+++.++|+..... ........++.... ..++.+.+ .....-
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f--d~i~~s~~----------------~~~~KP 160 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF--DFLIESCQ----------------VGMVKP 160 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS--SEEEEHHH----------------HTCCTT
T ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHC--CEEEECCC----------------CCCCHH
T ss_conf 788019999999986348633454341240899999876525738666--38995122----------------334304
Q ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEECCCCHH
Q ss_conf 8433999999996549989999699689775630991-5994463188
Q 002768 514 FPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADI-GIAVADATDA 560 (883)
Q Consensus 514 ~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~Adv-GIa~~~~~~~ 560 (883)
.|+--..+.+.+.-....+.|+||...|+.+-+++++ +|.+.++.+.
T Consensus 161 ~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~~~~ 208 (225)
T d1zd3a1 161 EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTDTA 208 (225)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSSHHHH
T ss_pred HHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCEEEEECCCCHH
T ss_conf 778888776301568651058816888799999869989998986345
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=87.33 E-value=0.097 Score=26.43 Aligned_cols=100 Identities=11% Similarity=-0.017 Sum_probs=54.1
Q ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCC--------HHHH-------HHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCHH
Q ss_conf 999337999999985898399982696--------8999-------9999990999888-89875458878978911289
Q 002768 438 PPRHDSVDTIRRALNLGVCVKMITGDQ--------LAIA-------KETGRRLGMATNM-YPSSSLLGRDKDENEALPVD 501 (883)
Q Consensus 438 ~lr~~~~~~I~~l~~~Gi~v~miTGD~--------~~~a-------~~ia~~~gi~~~~-~~~~~l~~~~~~~~~~~~~~ 501 (883)
.+-|++.++++.|++.|+++.++|... .... .+.-...|+.... +-+......+
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~---------- 99 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADE---------- 99 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGC----------
T ss_pred EECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCC----------
T ss_conf 6875599999999873873011046430036777787765454300010012333331066414313454----------
Q ss_pred HHHHHCCCEEEECHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEE
Q ss_conf 9987549188748433999999996549989999699689775630991599
Q 002768 502 ELIEEADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIA 553 (883)
Q Consensus 502 ~~~~~~~v~a~~~P~~K~~iV~~lq~~g~~v~~iGDG~ND~~aLk~AdvGIa 553 (883)
..+..-.|+-=.++++.+.-..+.+.|+||...|..|=+.|++---
T Consensus 100 ------~~~~KP~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i 145 (161)
T d2fpwa1 100 ------CDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGL 145 (161)
T ss_dssp ------CSSSTTSSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEE
T ss_pred ------CCCCCCCCHHHHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCCEEE
T ss_conf ------2333642189999987619894048998998999999998699099
|