Citrus Sinensis ID: 002770
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | 2.2.26 [Sep-21-2011] | |||||||
| B9DFX7 | 883 | Copper-transporting ATPas | yes | no | 0.980 | 0.980 | 0.720 | 0.0 | |
| Q9SZC9 | 949 | Copper-transporting ATPas | no | no | 0.851 | 0.792 | 0.417 | 1e-169 | |
| P37385 | 790 | Probable copper-transport | yes | no | 0.843 | 0.943 | 0.383 | 1e-142 | |
| P07893 | 790 | Probable copper-transport | yes | no | 0.843 | 0.943 | 0.382 | 1e-142 | |
| P32113 | 727 | Probable copper-importing | yes | no | 0.789 | 0.958 | 0.342 | 1e-116 | |
| Q4A0G1 | 794 | Copper-exporting P-type A | yes | no | 0.802 | 0.892 | 0.334 | 1e-115 | |
| Q8CN02 | 794 | Copper-exporting P-type A | yes | no | 0.798 | 0.887 | 0.343 | 1e-115 | |
| Q5HL56 | 794 | Copper-exporting P-type A | yes | no | 0.798 | 0.887 | 0.343 | 1e-115 | |
| Q2YWA3 | 802 | Copper-exporting P-type A | yes | no | 0.807 | 0.889 | 0.333 | 1e-114 | |
| A8Z3F8 | 802 | Copper-exporting P-type A | yes | no | 0.807 | 0.889 | 0.332 | 1e-114 |
| >sp|B9DFX7|HMA8_ARATH Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana GN=PAA2 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1257 bits (3252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/893 (72%), Positives = 729/893 (81%), Gaps = 27/893 (3%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRV---DIASRPKRRRRRRVPAVSNSLETRTQ 57
MA++LLR L P +L + KF +R SR +R R VSNS+E TQ
Sbjct: 1 MASNLLRFPLPPPSSL---HIRPSKFLVNRCFPRLRRSRIRRHCSRPFFLVSNSVEISTQ 57
Query: 58 PQNAPFELPKRRV--------DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLT 109
FE + + D+ +LLDVSGMMCGGCVARVKSVL +DDRV S VNMLT
Sbjct: 58 S----FESTESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLT 113
Query: 110 ETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKR 169
ETAA+K + E EV + AESL KRL E GFEAKRRVSG GVAENVKKWKE+ K+
Sbjct: 114 ETAAVKFKPEV-----EVTADTAESLAKRLTESGFEAKRRVSGMGVAENVKKWKEMVSKK 168
Query: 170 EDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGAL 229
EDLLVKSRNRVA AWTLVALCCGSH SHILHSLGIHIAHG +W+LL NSYVKGG A+GAL
Sbjct: 169 EDLLVKSRNRVAFAWTLVALCCGSHTSHILHSLGIHIAHGGIWDLLHNSYVKGGLAVGAL 228
Query: 230 FGPGRASLM----AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLL 285
GPGR L AF K SPNMNSLVG GS+ AF ISL+SL+ PELEWDASFF+EPVMLL
Sbjct: 229 LGPGRELLFDGIKAFGKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLL 288
Query: 286 GFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPT 345
GFVLLGRSLEERA+++AS+DMNELLSL+STQSRLVITSS++ + D+VL SD+IC+ V
Sbjct: 289 GFVLLGRSLEERAKLQASTDMNELLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSV 348
Query: 346 DDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGP 405
DDIRVGDS+LVLPGET PVDG VLAGRSVVDESML+GESLPVFKEEG +VSAGTINWDGP
Sbjct: 349 DDIRVGDSLLVLPGETFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGP 408
Query: 406 LRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYI 465
LRI+A STGSNS ISKIV MVE+AQG AP+QRLADAIAGPFVY++M+LSA TFAFWYY+
Sbjct: 409 LRIKASSTGSNSTISKIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYV 468
Query: 466 GSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGL 525
GS IFPDVLL+D+AGP+G+ L LSLKL+VDVLVVSCPCALGLATPTAIL+GTSLGAK+G
Sbjct: 469 GSHIFPDVLLNDIAGPDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGY 528
Query: 526 LIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPI 585
LIRGGDVLERLA ID +ALDKTGTLTEG+P V VAS Y+E E+LK+AAAVEKTATHPI
Sbjct: 529 LIRGGDVLERLASIDCVALDKTGTLTEGRPVVSGVASLGYEEQEVLKMAAAVEKTATHPI 588
Query: 586 AKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQ 645
AKAIVN+AESLNL +P TRGQL EPGFG L E+DGR VAVG+LEWV +RF K+ D SD+
Sbjct: 589 AKAIVNEAESLNLKTPETRGQLTEPGFGTLAEIDGRFVAVGSLEWVSDRFLKKNDSSDMV 648
Query: 646 HLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIK 705
LE + H+ S +S S YSK+VVYVGREGEGIIGAIAISD LR DAE TV LQ+KGIK
Sbjct: 649 KLESLLDHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTVARLQEKGIK 708
Query: 706 TLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAP 765
T+LLSGDRE AVA AK VGI E N SL+P++K E IS LQ+SGH VAMVGDGINDAP
Sbjct: 709 TVLLSGDREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAMVGDGINDAP 768
Query: 766 SLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAY 825
SLA ADVGIAL+IEAQENAAS AAS+IL+ NKLS VVDAL LA+ATM+KVYQNL+WA+AY
Sbjct: 769 SLAQADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAWAIAY 828
Query: 826 NVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
NV++IPIAAG LLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ H+ E++K
Sbjct: 829 NVISIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETSKN 881
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Mediates copper transfer across the chloroplast thylakoid membrane. Required for copper delivery into the thylakoids lumen, which is essential for the function of copper proteins. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 4 |
| >sp|Q9SZC9|HMA6_ARATH Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana GN=PAA1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 595 bits (1534), Expect = e-169, Method: Compositional matrix adjust.
Identities = 348/833 (41%), Positives = 495/833 (59%), Gaps = 81/833 (9%)
Query: 74 VLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAE 133
++LDV GM CGGC A VK +L + +V S +VN+ TETA + EA + + ++ E
Sbjct: 150 IILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPEA-KSVPDWQKSLGE 208
Query: 134 SLGKRLMECGFEAKRRVSGTGVAENV-KKWKELAKKREDLLVKSRNRVALAWTLVALCCG 192
+L L CGF++ R V EN K ++ K ++ L +S +A++W L A+C
Sbjct: 209 TLANHLTNCGFQSTPR---DLVTENFFKVFETKTKDKQARLKESGRELAVSWALCAVCLV 265
Query: 193 SHASHIL----------HSLGIHIAHGPLWELLDNSYVKGGFALGALFGPGRASLM---- 238
H +H L HS G H++ L L GPGR ++
Sbjct: 266 GHLTHFLGVNAPWIHAIHSTGFHVS----------------LCLITLLGPGRKLVLDGIK 309
Query: 239 AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERA 298
+ KGSPNMN+LVG G++ +F +S ++ + P+L W +FFEEPVML+ FVLLGR+LE+RA
Sbjct: 310 SLLKGSPNMNTLVGLGALSSFSVSSLAAMIPKLGWK-TFFEEPVMLIAFVLLGRNLEQRA 368
Query: 299 RIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLP 358
+I+A+SDM LLS++ +++RL++ S+ VEVP + + VGD V++LP
Sbjct: 369 KIKATSDMTGLLSVLPSKARLLLDGDLQNST-----------VEVPCNSLSVGDLVVILP 417
Query: 359 GETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSM 418
G+ +P DG V +GRS +DES +GE LPV KE G V+AG+IN +G L +E +G +
Sbjct: 418 GDRVPADGVVKSGRSTIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETA 477
Query: 419 ISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDM 478
+ I+ +VEEAQ REAP+Q+L D +AG F Y VM LSAATF FW G+ + P L
Sbjct: 478 VGDIIRLVEEAQSREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSAL---- 533
Query: 479 AGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLAR 538
NG+P+ L+L+LS VLVV+CPCALGLATPTA+LVGTSLGA++GLL+RGGD+LE+ +
Sbjct: 534 --HNGSPMSLALQLSCSVLVVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSL 591
Query: 539 IDYLALDKTGTLTEGKPAVFNVA---------SFVYDESEILKIAAAVEKTATHPIAKAI 589
+D + DKTGTLT+G P V V + + E E+L +AAAVE THP+ KAI
Sbjct: 592 VDTVVFDKTGTLTKGHPVVTEVIIPENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAI 651
Query: 590 VNKAESLNL-TSPITRGQLA-EPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHL 647
V A + N T G EPG G + V+ + V VGTLEWV +R G+ S +
Sbjct: 652 VKAARARNCQTMKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWV-KRHGATGN-SLLALE 709
Query: 648 EHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTL 707
EH + +Q SVVY+G + + I D +R DA V +L ++GI
Sbjct: 710 EHEINNQ------------SVVYIGVDNT-LAAVIRFEDKVREDAAQVVENLTRQGIDVY 756
Query: 708 LLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSL 767
+LSGD+ A A VGI E + + + P +K I+ LQ + VAMVGDGINDA
Sbjct: 757 MLSGDKRNAANYVASVVGINHERVIAGVKPAEKKNFINELQKNKKIVAMVGDGINDAA-- 814
Query: 768 ALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNV 827
ALA + + + AAS + ++L+GN+L+Q++DA++L++ TM V QNL WA YN+
Sbjct: 815 ALASSNVGVAMGGGAGAASEVSPVVLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNI 874
Query: 828 VAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKKKE 880
V IPIAAG LLP +TPS++G LM +SS+ V++NSLLL++ F + K
Sbjct: 875 VGIPIAAGVLLPLTGTMLTPSMAGALMGVSSLGVMTNSLLLRYRFFSNRNDKN 927
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Mediates copper transfer across the plastid envelope. Required for the delivery of copper into the plastid stroma, which is essential for the function of copper proteins. Seems to be selective for monovalent copper Cu(+) transport. Plays also a role in glucose signaling-mediated cell proliferation of root meristem in non-green tissues. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|P37385|ATSY_SYNE7 Probable copper-transporting ATPase SynA OS=Synechococcus elongatus (strain PCC 7942) GN=synA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 314/819 (38%), Positives = 463/819 (56%), Gaps = 74/819 (9%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
+++L++V GM C GCVA V+ L V++V+VN++T A + +E+ + +
Sbjct: 14 TSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVNLITRLAKVDYDAALIEDPTVLTTEI 73
Query: 132 AESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCC 191
GF A+ R + + + L ++R L + + + +W
Sbjct: 74 TG--------LGFRAQLRQDDNPLTLPIAEIPPLQQQRLQLAIAAFLLIVSSW------- 118
Query: 192 GSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGALFGPGRASLMA----FRKGSPNM 247
H H L H G D + A AL GPGR+ L A R G+PNM
Sbjct: 119 -GHLGHWLD----HPLPG-----TDQLWFHALLATWALLGPGRSILQAGWQGLRCGAPNM 168
Query: 248 NSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMN 307
NSLV G+ A+L SLV+LL P+L W FF+EPVMLLGF+LLGR+LEE+AR R+ + +
Sbjct: 169 NSLVLLGTGSAYLASLVALLWPQLGW-VCFFDEPVMLLGFILLGRTLEEQARFRSQAALQ 227
Query: 308 ELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGR 367
LL+L ++L +T+ S + D + I P +R GD V VLPG+ IPVDG
Sbjct: 228 NLLALQPETTQL-LTAPSSIAPQDLLEAPAQIW---PVAQLRAGDYVQVLPGDRIPVDGC 283
Query: 368 VLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVE 427
++AG+S +D +ML+GE LP + G V AGT+N L I A TGS + ++ IV V
Sbjct: 284 IVAGQSTLDTAMLTGEPLPQPCQVGDRVCAGTLNLSHRLVIRAEQTGSQTRLAAIVRCVA 343
Query: 428 EAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLS----------- 476
EAQ R+AP+QR ADAIAG FVY V ++A TF FW +GS+ +P VL
Sbjct: 344 EAQQRKAPVQRFADAIAGRFVYGVCAIAALTFGFWATLGSRWWPQVLQQPLPGLLIHAPH 403
Query: 477 ---DMAGPNGN-PLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDV 532
+MA P+ + PLLL+L L++ VLVV+CPCALGLATPTAILV T L A+QG+L+RGGDV
Sbjct: 404 HGMEMAHPHSHSPLLLALTLAISVLVVACPCALGLATPTAILVATGLAAEQGILVRGGDV 463
Query: 533 LERLARIDYLALDKTGTLTEGKPAVFNVASFV-YDESEILKIAAAVEKTATHPIAKAIVN 591
LE+LARI + DKTGTLT+G+ + + D +L+ AAA+E + HP+A A+
Sbjct: 464 LEQLARIKHFVFDKTGTLTQGQFELIEIQPLADVDPDRLLQWAAALEADSRHPLATALQT 523
Query: 592 KAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAV 651
A++ NL + PG G+ G DGR + +G WV
Sbjct: 524 AAQAANLAPIAASDRQQVPGLGVSGTCDGRSLRLGNPTWV-------------------- 563
Query: 652 THQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSG 711
Q + P+ + + + + ++ + D R +A V++L+ +G +LSG
Sbjct: 564 --QVATAKLPTGSAAATSIWLADDQQLLACFWLQDQPRPEAAEVVQALRSRGATVQILSG 621
Query: 712 DREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD 771
DR+ A A+++G+ E + + + P+ K+ I+ LQ+ G VAM+GDGINDAP+LA A
Sbjct: 622 DRQTTAVALAQQLGLESETVVAEVLPEDKAAAIAALQSQGDAVAMIGDGINDAPALATAA 681
Query: 772 VGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIP 831
VGI+L A + A +A ++L ++L V+ A +L++ + + QNL+WA+ YNVV +P
Sbjct: 682 VGISL--AAGSDIAQDSAGLLLSRDRLDSVLVAWNLSQMGLRTIRQNLTWALGYNVVMLP 739
Query: 832 IAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQF 870
+AAGA LP Y A+TP+++G MA+SS+ VVSNSLLL++
Sbjct: 740 LAAGAFLPAYGLALTPAIAGACMAVSSLAVVSNSLLLRY 778
|
Involved in copper transport. Synechococcus elongatus (strain PCC 7942) (taxid: 1140) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 4 |
| >sp|P07893|ATSY_SYNP6 Probable copper-transporting ATPase SynA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=synA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 504 bits (1299), Expect = e-142, Method: Compositional matrix adjust.
Identities = 313/819 (38%), Positives = 462/819 (56%), Gaps = 74/819 (9%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
+++L++V GM C GCVA V+ L V++V+VN++T A + +E+ + +
Sbjct: 14 TSILVEVEGMKCAGCVAAVERRLQQTAGVEAVSVNLITRLAKVDYDAALIEDPTVLTTEI 73
Query: 132 AESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCC 191
GF A+ R + + + L ++R L + + + +W
Sbjct: 74 TG--------LGFRAQLRQDDNPLTLPIAEIPPLQQQRLQLAIAAFLLIVSSW------- 118
Query: 192 GSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGALFGPGRASLMA----FRKGSPNM 247
H H L H G D + A+ AL GPGR+ L A R G+PNM
Sbjct: 119 -GHLGHWLD----HPLPG-----TDQLWFHALLAIWALLGPGRSILQAGWQGLRCGAPNM 168
Query: 248 NSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMN 307
NSLV G+ A+L SLV+LL P+L W F +EPVMLLGF+LLGR+LEE+AR R+ + +
Sbjct: 169 NSLVLLGTGSAYLASLVALLWPQLGW-VCFLDEPVMLLGFILLGRTLEEQARFRSQAALQ 227
Query: 308 ELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGR 367
LL+L ++L +T+ S + D + I P +R GD V VLPG IPVDG
Sbjct: 228 NLLALQPETTQL-LTAPSSIAPQDLLEAPAQIW---PVAQLRAGDYVQVLPGVRIPVDGC 283
Query: 368 VLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVE 427
++AG+S +D +ML+GE LP + G V AGT+N L I A TGS + ++ IV V
Sbjct: 284 IVAGQSTLDTAMLTGEPLPQPCQVGDRVCAGTLNLSHRLVIRAEQTGSQTRLAAIVRCVA 343
Query: 428 EAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLS----------- 476
EAQ R+AP+QR ADAIAG FVY V ++A TF FW +GS+ +P VL
Sbjct: 344 EAQQRKAPVQRFADAIAGRFVYGVCAIAALTFGFWATLGSRWWPQVLQQPLPGLLIHAPH 403
Query: 477 ---DMAGPNGN-PLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDV 532
+MA P+ + PLLL+L L++ VLVV+CPCALGLATPTAILV T L A+QG+L+RGGDV
Sbjct: 404 HGMEMAHPHSHSPLLLALTLAISVLVVACPCALGLATPTAILVATGLAAEQGILVRGGDV 463
Query: 533 LERLARIDYLALDKTGTLTEGKPAVFNVASFV-YDESEILKIAAAVEKTATHPIAKAIVN 591
LE+LARI + DKTGTLT+G+ + + D +L+ AAA+E + HP+A A+
Sbjct: 464 LEQLARIKHFVFDKTGTLTQGQFELIEIQPLADVDPDRLLQWAAALEADSRHPLATALQT 523
Query: 592 KAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAV 651
A++ NL + PG G+ G DGR + +G WV
Sbjct: 524 AAQAANLAPIAASDRQQVPGLGVSGTCDGRSLRLGNPTWV-------------------- 563
Query: 652 THQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSG 711
Q + P+ + + + + ++ + D R +A V++L+ +G +LSG
Sbjct: 564 --QVATAKLPTGSAAATSIWLADDQQLLACFWLQDQPRPEAAEVVQALRSRGATVQILSG 621
Query: 712 DREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD 771
DR+ A A+++G+ E + + + P+ K+ I+ LQ+ G VAM+GDGINDAP+LA A
Sbjct: 622 DRQTTAVALAQQLGLESETVVAEVLPEDKAAAIAALQSQGDAVAMIGDGINDAPALATAA 681
Query: 772 VGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIP 831
VGI+L A + A +A ++L ++L V+ A +L++ + + QNL+WA+ YNVV +P
Sbjct: 682 VGISL--AAGSDIAQDSAGLLLSRDRLDSVLVAWNLSQMGLRTIRQNLTWALGYNVVMLP 739
Query: 832 IAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQF 870
+AAGA LP Y A+TP+++G MA+SS+ VVSNSLLL++
Sbjct: 740 LAAGAFLPAYGLALTPAIAGACMAVSSLAVVSNSLLLRY 778
|
Involved in copper transport. Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) (taxid: 269084) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 4 |
| >sp|P32113|COPA_ENTHA Probable copper-importing P-type ATPase A OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) GN=copA PE=1 SV=2 | Back alignment and function description |
|---|
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 275/804 (34%), Positives = 428/804 (53%), Gaps = 107/804 (13%)
Query: 78 VSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGK 137
++GM C C AR++ L V S VN+ TE A++K E + V N+ G
Sbjct: 12 ITGMTCANCSARIEKELNEQPGVMSATVNLATEKASVKYTDTTTERLIKSVENIG--YGA 69
Query: 138 RLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGSHASH 197
L + EA ++ +AE +K L K + DL+ + + L ++A+ GSH
Sbjct: 70 ILYD---EAHKQ----KIAE--EKQTYLRKMKFDLIFSAILTLPLMLAMIAMMLGSH--- 117
Query: 198 ILHSLGIHIAHGPLWELLDNSYVKGGFALGALFGPG----RASLMAFRKGSPNMNSLVGF 253
GP+ S V+ FAL F G + + A + +PNM+ LV
Sbjct: 118 -----------GPIVSFFHLSLVQLLFALPVQFYVGWRFYKGAYHALKTKAPNMDVLVAI 166
Query: 254 GSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLV 313
G+ AF +S+ + P D +FE M++ +LLG+ LE A+ + + +++SL
Sbjct: 167 GTSAAFALSIYNGFFPSHSHDL-YFESSSMIITLILLGKYLEHTAKSKTGDAIKQMMSLQ 225
Query: 314 STQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRS 373
+ ++++ E + D++ + D +++ PGE +P DGR++AG S
Sbjct: 226 TKTAQVLRDGKEE---------------TIAIDEVMIDDILVIRPGEQVPTDGRIIAGTS 270
Query: 374 VVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGRE 433
+DESML+GES+PV K+E V GTIN +G ++I+ G ++++++I+ MVE+AQG +
Sbjct: 271 ALDESMLTGESVPVEKKEKDMVFGGTINTNGLIQIQVSQIGKDTVLAQIIQMVEDAQGSK 330
Query: 434 APIQRLADAIAGPFVYSVMTLSAATFAF--WYYIGSQIFPDVLLSDMAGPNGNPLLLSLK 491
APIQ++AD I+G FV V+ L+ T W Q L+L
Sbjct: 331 APIQQIADKISGIFVPIVLFLALVTLLVTGWLTKDWQ-------------------LALL 371
Query: 492 LSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLT 551
SV VLV++CPCALGLATPTAI+VGT +GA G+LI+GG+ LE A ++ + LDKTGT+T
Sbjct: 372 HSVSVLVIACPCALGLATPTAIMVGTGVGAHNGILIKGGEALEGAAHLNSIILDKTGTIT 431
Query: 552 EGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNL-TSPITRGQLAEP 610
+G+P V +V EI+ + ++E + HP+ KAIV + T PIT +A P
Sbjct: 432 QGRPEVTDVIG----PKEIISLFYSLEHASEHPLGKAIVAYGAKVGAKTQPITDF-VAHP 486
Query: 611 GFGILGEVDGRLVAVGT------LEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNY 664
G GI G ++G GT + ++ FQ+Q LE A
Sbjct: 487 GAGISGTINGVHYFAGTRKRLAEMNLSFDEFQEQA-----LELEQA-------------- 527
Query: 665 SKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEV 724
K+V+++ E E ++G IA++D ++ DA+ + LQQKG+ +++GD + A A K+V
Sbjct: 528 GKTVMFLANE-EQVLGMIAVADQIKEDAKQAIEQLQQKGVDVFMVTGDNQRAAQAIGKQV 586
Query: 725 GIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENA 784
GI ++I + + P++K+ + LQ +G V MVGDGINDAP+LALADVGIA+ + +
Sbjct: 587 GIDSDHIFAEVLPEEKANYVEKLQKAGKKVGMVGDGINDAPALALADVGIAMG--SGTDI 644
Query: 785 ASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFA 844
A A + L+ + L+ + + L+ AT+ K+ QNL WA YN + IP AA L
Sbjct: 645 AMETADVTLMNSHLTSINQMISLSAATLKKIKQNLFWAFIYNTIGIPFAAFGFL------ 698
Query: 845 MTPSLSGGLMALSSIFVVSNSLLL 868
P ++GG MA SSI V+ NSL L
Sbjct: 699 -NPIIAGGAMAFSSISVLLNSLSL 721
|
Probably involved in copper import under copper limiting conditions. Enterococcus hirae (taxid: 1354) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: - |
| >sp|Q4A0G1|COPA_STAS1 Copper-exporting P-type ATPase A OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 272/812 (33%), Positives = 436/812 (53%), Gaps = 103/812 (12%)
Query: 70 VDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVN 129
++ T LDV GM C C R++ VL D VD VN+ TE A I A
Sbjct: 70 LNETAELDVIGMTCAACSNRIEKVLNRTDGVDQATVNLTTENATISYNPSATS------- 122
Query: 130 NVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVAL 189
++L K++ + G++A+ + KE+A+K ++ R+++ L
Sbjct: 123 --VDALIKKIQKIGYDAQPK-------------KEVAEKSSQKELELRSKLVKLIISAVL 167
Query: 190 CCGSHASHILHSLGIHIAH---GPLWELLDNSYVKGGFALGALFGPGRASLMAFRKGSPN 246
+ ++H GI I P ++ + + V+ F +G F G + R GS N
Sbjct: 168 AAPLLLTMLVHLFGIQIPSIFMNPWFQFILATPVQ--FIIGWQFYVG--AYKNLRNGSAN 223
Query: 247 MNSLVGFGSIVAFLISLVSLLK--------PELEWDASFFEEPVMLLGFVLLGRSLEERA 298
M+ LV G+ A+ SL ++K P L +FE +L+ +L G+ LE RA
Sbjct: 224 MDVLVALGTSAAYFYSLYEMVKWLFNANVMPHL-----YFETSAVLITLILFGKYLETRA 278
Query: 299 RIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLP 358
+ + ++ ++ELL+L + ++R++ + E +P +D+ GD +++ P
Sbjct: 279 KTQTTNALSELLNLQAKEARVLRDNKEQ---------------MIPLNDVVEGDYLIIKP 323
Query: 359 GETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSM 418
GE IPVDG+++ G++ +DESML+GES+PV K + V T+N +G + ++A G ++
Sbjct: 324 GEKIPVDGKIIKGKTSIDESMLTGESMPVEKVQDDNVIGSTMNKNGSITVKATKVGKDTA 383
Query: 419 ISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWY-YIGSQIFPDVLLSD 477
++ I+ +VEEAQG +APIQRLAD I+G FV V+ ++ TF W ++ F L++
Sbjct: 384 LASIIKVVEEAQGSKAPIQRLADVISGYFVPIVVGIAVLTFIIWIAFVQQGQFEPALVAA 443
Query: 478 MAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLA 537
+A VLV++CPCALGLATPT+I+VGT A+ G+L +GG+ +ER
Sbjct: 444 IA----------------VLVIACPCALGLATPTSIMVGTGKAAENGILFKGGEHIERTH 487
Query: 538 RIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLN 597
+ID + LDKTGT+T GKP V F DE E L++ A+ EK + HP+A AIVN A+++N
Sbjct: 488 QIDTVVLDKTGTITNGKPV---VTDFDGDE-EALQLLASAEKGSEHPLADAIVNYAQTMN 543
Query: 598 LTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSE 657
+ T A PG GI + G+ + VG +++ + ++ D++ E +T
Sbjct: 544 IKLLDTTDFEAVPGRGIKANISGKNLIVGNRQFMND------ENVDIKDSEDIMTQ---- 593
Query: 658 LASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAV 717
S + ++ + +E G+ +A++D+++ ++ L IK ++L+GD E
Sbjct: 594 -FEKSGKTAMLIAINQEYRGM---VAVADTVKDSTATAIKQLHDLNIKVVMLTGDNERTA 649
Query: 718 AATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQ 777
A A EVGI + I + + P++K+ I +LQT +AMVGDG+NDAP+L AD+GIA
Sbjct: 650 QAIANEVGI--DTIIAQVLPEEKAAKIKSLQTQDKTIAMVGDGVNDAPALVQADIGIA-- 705
Query: 778 IEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGAL 837
I A AA + +LG L + A+ +KAT+ + QNL WA YNV IPIAA L
Sbjct: 706 IGTGTEVAIEAADVTILGGDLLLIPKAIKASKATIRNIRQNLFWAFGYNVAGIPIAALGL 765
Query: 838 LPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ 869
L P ++G MALSS+ VV+N+L L+
Sbjct: 766 L-------APWIAGAAMALSSVSVVTNALRLK 790
|
Involved in copper export. Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) (taxid: 342451) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q8CN02|COPA_STAES Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 278/809 (34%), Positives = 432/809 (53%), Gaps = 104/809 (12%)
Query: 74 VLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAE 133
V L+++GM C C R++ VL V VN+ TE A IK A E
Sbjct: 73 VELNINGMTCAACSNRIEKVLNQTQGVQQATVNLTTEQALIKYYPSATN---------TE 123
Query: 134 SLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGS 193
+L KR+ G++A+ + S A++ +K +EL KR L++ + + L +V
Sbjct: 124 ALIKRIQNIGYDAETKTSSK--AQSNRKKQELKHKRNKLIISAILSLPLLLVMV------ 175
Query: 194 HASHILHSLGIHIAHGPLWELLDNSYVK------GGFALGALFGPGRASLMAFRKGSPNM 247
+HI+ + +L N +V+ F +G F G + R GS NM
Sbjct: 176 ----------VHISPISIPSILVNPWVQLILSTPVQFIIGWQFYVG--AYKNLRNGSANM 223
Query: 248 NSLVGFGSIVAFLISLVSL---LKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASS 304
+ LV G+ A+ S+ + L + +FE +L+ +LLG+ LE RA+ + ++
Sbjct: 224 DVLVAVGTSAAYFYSIYEMMMWLTHQTHHPHLYFETSAILITLILLGKYLEARAKSQTTN 283
Query: 305 DMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPV 364
++ELL+L + ++R++ + E + +P D ++VGD++L+ PGE IPV
Sbjct: 284 ALSELLNLQAKEARVIKENKE---------------IMLPLDKVKVGDTLLIKPGEKIPV 328
Query: 365 DGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVS 424
DG+V G + +DESML+GES+PV K G +V T+N +G + IEA G ++ +S I+
Sbjct: 329 DGKVTKGDTSIDESMLTGESIPVEKSSGDSVIGSTMNKNGSIMIEATQVGGDTALSHIIK 388
Query: 425 MVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGN 484
+VE+AQ +APIQRLAD I+G FV V++++ TF W + P
Sbjct: 389 VVEDAQSSKAPIQRLADIISGYFVPIVVSIAVITFIIWIIF---VHPGQF---------E 436
Query: 485 PLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLAL 544
P L+S ++ VLV++CPCALGLATPT+I+VGT A+ G+L +GG +ER +D + L
Sbjct: 437 PALVS---AISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGQFVERAHYVDTIVL 493
Query: 545 DKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVN--KAESLNLTSPI 602
DKTGT+T G+P V +V D ++ L++ A+ E + HP+A AIV K + LNL
Sbjct: 494 DKTGTITNGQPV---VTDYVGD-NDTLQLLASAENASEHPLADAIVTYAKDKGLNLLDND 549
Query: 603 TRGQLAEPGFGILGEVDGRLVAVGTLEWV--YERFQKQGDHSDVQHLEHAVTHQSSELAS 660
T + PG GI + + + VG + + Y + + H EH Q++ + +
Sbjct: 550 TFKSI--PGHGIKATIHQQQILVGNRKLMNDYNISISNKLNDQLNHYEH--LGQTAMMIA 605
Query: 661 PSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAAT 720
N I G IA++D++++DA+ ++ L+ I ++L+GD
Sbjct: 606 VDNQ-------------INGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTI 652
Query: 721 AKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEA 780
AK+VGI E++ + + P++K+ IS LQ G VAMVGDGINDAP+L AD+G+A+ A
Sbjct: 653 AKQVGI--EHVIAEVLPEEKAHQISLLQDKGKQVAMVGDGINDAPALVKADIGMAIGTGA 710
Query: 781 QENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQ 840
+ A AA I +LG L V A+ +KAT+ + QNL WA YNV IPIAA LL
Sbjct: 711 E--VAIEAADITILGGDLLLVPKAIKASKATIKNIRQNLFWAFGYNVAGIPIAACGLL-- 766
Query: 841 YDFAMTPSLSGGLMALSSIFVVSNSLLLQ 869
P ++G MALSS+ VV N+L L+
Sbjct: 767 -----APWIAGAAMALSSVSVVMNALRLK 790
|
Involved in copper export. Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q5HL56|COPA_STAEQ Copper-exporting P-type ATPase A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 278/809 (34%), Positives = 432/809 (53%), Gaps = 104/809 (12%)
Query: 74 VLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAE 133
V L+++GM C C R++ VL V VN+ TE A IK A E
Sbjct: 73 VELNINGMTCAACSNRIEKVLNQTQGVQQATVNLTTEQALIKYYPSATN---------TE 123
Query: 134 SLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGS 193
+L KR+ G++A+ + S A++ +K +EL KR L++ + + L +V
Sbjct: 124 ALIKRIQNIGYDAETKTSSK--AQSNRKKQELKHKRNKLIISAILSLPLLLVMV------ 175
Query: 194 HASHILHSLGIHIAHGPLWELLDNSYVK------GGFALGALFGPGRASLMAFRKGSPNM 247
+HI+ + +L N +V+ F +G F G + R GS NM
Sbjct: 176 ----------VHISPISIPSILVNPWVQLILSTPVQFIIGWQFYVG--AYKNLRNGSANM 223
Query: 248 NSLVGFGSIVAFLISLVSL---LKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASS 304
+ LV G+ A+ S+ + L + +FE +L+ +LLG+ LE RA+ + ++
Sbjct: 224 DVLVAVGTSAAYFYSIYEMMMWLTHQTHHPHLYFETSAILITLILLGKYLEARAKSQTTN 283
Query: 305 DMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPV 364
++ELL+L + ++R++ + E + +P D ++VGD++L+ PGE IPV
Sbjct: 284 ALSELLNLQAKEARVIKENKE---------------IMLPLDKVKVGDTLLIKPGEKIPV 328
Query: 365 DGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVS 424
DG+V G + +DESML+GES+PV K G +V T+N +G + IEA G ++ +S I+
Sbjct: 329 DGKVTKGDTSIDESMLTGESIPVEKSSGDSVIGSTMNKNGSIMIEATQVGGDTALSHIIK 388
Query: 425 MVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGN 484
+VE+AQ +APIQRLAD I+G FV V++++ TF W + P
Sbjct: 389 VVEDAQSSKAPIQRLADIISGYFVPIVVSIAVITFIIWIIF---VHPGQF---------E 436
Query: 485 PLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLAL 544
P L+S ++ VLV++CPCALGLATPT+I+VGT A+ G+L +GG +ER +D + L
Sbjct: 437 PALVS---AISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGQFVERAHYVDTIVL 493
Query: 545 DKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVN--KAESLNLTSPI 602
DKTGT+T G+P V +V D ++ L++ A+ E + HP+A AIV K + LNL
Sbjct: 494 DKTGTITNGQPV---VTDYVGD-NDTLQLLASAENASEHPLADAIVTYAKDKGLNLLDND 549
Query: 603 TRGQLAEPGFGILGEVDGRLVAVGTLEWV--YERFQKQGDHSDVQHLEHAVTHQSSELAS 660
T + PG GI + + + VG + + Y + + H EH Q++ + +
Sbjct: 550 TFKSI--PGHGIKATIHQQQILVGNRKLMNDYNISISNKLNDQLNHYEH--LGQTAMMIA 605
Query: 661 PSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAAT 720
N I G IA++D++++DA+ ++ L+ I ++L+GD
Sbjct: 606 VDNQ-------------INGIIAVADTVKNDAKQAIKELRNMNIDVVMLTGDNNRTAQTI 652
Query: 721 AKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEA 780
AK+VGI E++ + + P++K+ IS LQ G VAMVGDGINDAP+L AD+G+A+ A
Sbjct: 653 AKQVGI--EHVIAEVLPEEKAHQISLLQDKGKQVAMVGDGINDAPALVKADIGMAIGTGA 710
Query: 781 QENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQ 840
+ A AA I +LG L V A+ +KAT+ + QNL WA YNV IPIAA LL
Sbjct: 711 E--VAIEAADITILGGDLLLVPKAIKASKATIKNIRQNLFWAFGYNVAGIPIAACGLL-- 766
Query: 841 YDFAMTPSLSGGLMALSSIFVVSNSLLLQ 869
P ++G MALSS+ VV N+L L+
Sbjct: 767 -----APWIAGAAMALSSVSVVMNALRLK 790
|
Involved in copper export. Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|Q2YWA3|COPA_STAAB Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 274/821 (33%), Positives = 434/821 (52%), Gaps = 108/821 (13%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
TV LD++GM C C +R++ VL D V + VN+ TE A + E + A
Sbjct: 73 TVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETD---------A 123
Query: 133 ESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCG 192
+ L R+ + G++A + + +K + L K L++ + L+ L+ L
Sbjct: 124 DKLVTRIQKLGYDAS--IKDNNKDQTSRKAEALQHKLIKLIISA----VLSLPLLMLM-- 175
Query: 193 SHASHILHSLGIHIA---HGPLWELLDNSYVKGGFALGALFGPGRASLMAFRKGSPNMNS 249
+H +HI P ++ + + V+ F +G F G + R G NM+
Sbjct: 176 -----FVHLFNMHIPALFTNPWFQFILATPVQ--FIIGWQFYVG--AYKNLRNGGANMDV 226
Query: 250 LVGFGSIVAFLISLVSLLK--------PELEWDASFFEEPVMLLGFVLLGRSLEERARIR 301
LV G+ A+ S+ +++ P L +FE +L+ +L G+ LE RA+ +
Sbjct: 227 LVAVGTSAAYFYSIYEMIRWLNGSTTQPHL-----YFETSAVLITLILFGKYLEARAKSQ 281
Query: 302 ASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGET 361
++ + ELLSL + ++R++ +E + +P +++ VGD+++V PGE
Sbjct: 282 TTNALGELLSLQAKEARILKDGNE---------------LMIPLNEVHVGDTLIVKPGEK 326
Query: 362 IPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISK 421
IPVDG+++ G + +DESML+GES+PV K TV T+N +G + + A G ++ ++
Sbjct: 327 IPVDGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALAN 386
Query: 422 IVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGP 481
I+ +VEEAQ +APIQRLAD I+G FV V+ ++ TF W + + P
Sbjct: 387 IIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITL---VTPGTF------- 436
Query: 482 NGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDY 541
P L++ S+ VLV++CPCALGLATPT+I+VGT A+ G+L +GG+ +ER +ID
Sbjct: 437 --EPALVA---SISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDT 491
Query: 542 LALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSP 601
+ LDKTGT+T G+P V + + + + L++ A EK + HP+A+AIVN A+ LT
Sbjct: 492 IVLDKTGTITNGRPVVTD----YHGDDQTLQLLATAEKDSEHPLAEAIVNYAKEKQLTLT 547
Query: 602 ITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSE---- 657
T A PG GI +D + VG + D S +H+ +TH +
Sbjct: 548 ETTTFKAVPGHGIEATIDHHHILVGN-----RKLMADNDISLPKHISDDLTHYERDGKTA 602
Query: 658 LASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAV 717
+ NYS + G IA++D+L++ A+ ++ L GI+ +L+GD +
Sbjct: 603 MLIAVNYS------------LTGIIAVADTLKNHAKDAIKQLHDMGIEVAMLTGDNKNTA 650
Query: 718 AATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQ 777
A AK+VGI + + + + P++K+ I+ LQ G VAMVGDG+NDAP+L AD+GIA
Sbjct: 651 QAIAKQVGI--DTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIA-- 706
Query: 778 IEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGAL 837
I A AA I +LG L + A+ +KAT+ + QNL WA YN+ IPIAA L
Sbjct: 707 IGTGTEVAIEAAGITILGGDLMLIPKAIYASKATIRNIRQNLFWAFGYNIAGIPIAALGL 766
Query: 838 LPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
L P ++G MALSS+ VV+N+L L+ E +K
Sbjct: 767 L-------APWVAGAAMALSSVSVVTNALRLKKMRLEPRRK 800
|
Involved in copper export. Staphylococcus aureus (strain bovine RF122 / ET3-1) (taxid: 273036) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
| >sp|A8Z3F8|COPA_STAAT Copper-exporting P-type ATPase A OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=copA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 273/821 (33%), Positives = 433/821 (52%), Gaps = 108/821 (13%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
TV LD++GM C C +R++ VL D V + VN+ TE A + E + A
Sbjct: 73 TVELDITGMTCAACSSRIEKVLNKMDGVQNATVNLTTEQAKVDYYPEETD---------A 123
Query: 133 ESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCG 192
+ L R+ + G++A + + +K + L K L++ + L+ L+ L
Sbjct: 124 DKLVTRIQKLGYDAS--IKDNNKDQTSRKAEALQHKLIKLIISA----VLSLPLLMLM-- 175
Query: 193 SHASHILHSLGIHIA---HGPLWELLDNSYVKGGFALGALFGPGRASLMAFRKGSPNMNS 249
+H +HI P ++ + + V+ F +G F G + R G NM+
Sbjct: 176 -----FVHLFNMHIPALFTNPWFQFILATPVQ--FIIGWQFYVG--AYKNLRNGGANMDV 226
Query: 250 LVGFGSIVAFLISLVSLLK--------PELEWDASFFEEPVMLLGFVLLGRSLEERARIR 301
LV G+ A+ S+ +++ P L +FE +L+ +L G+ LE RA+ +
Sbjct: 227 LVAVGTSAAYFYSIYEMVRWLNGSTTQPHL-----YFETSAVLITLILFGKYLEARAKSQ 281
Query: 302 ASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGET 361
++ + ELLSL + ++R++ +E V +P +++ VGD+++V PGE
Sbjct: 282 TTNALGELLSLQAKEARILKDGNE---------------VMIPLNEVHVGDTLIVKPGEK 326
Query: 362 IPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISK 421
IPVDG+++ G + +DESML+GES+PV K TV T+N +G + + A G ++ ++
Sbjct: 327 IPVDGKIIKGMTAIDESMLTGESIPVEKNVDDTVIGSTMNKNGTITMTATKVGGDTALAN 386
Query: 422 IVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGP 481
I+ +VEEAQ +APIQRLAD I+G FV V+ ++ TF W + + P
Sbjct: 387 IIKVVEEAQSSKAPIQRLADIISGYFVPIVVGIALLTFIVWITL---VTPGTF------- 436
Query: 482 NGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDY 541
P L++ S+ VLV++CPCALGLATPT+I+VGT A+ G+L +GG+ +ER +ID
Sbjct: 437 --EPALVA---SISVLVIACPCALGLATPTSIMVGTGRAAENGILFKGGEFVERTHQIDT 491
Query: 542 LALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSP 601
+ LDKTGT+T G+P V + + +++ L++ A EK + HP+A+AIVN A+ L
Sbjct: 492 IVLDKTGTITNGRPVVTD----YHGDNQTLQLLATAEKDSEHPLAEAIVNYAKEKQLILT 547
Query: 602 ITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSE---- 657
T A PG GI +D + VG + D S +H+ +TH +
Sbjct: 548 ETTTFKAVPGHGIEATIDHHYILVGN-----RKLMADNDISLPKHISDDLTHYERDGKTA 602
Query: 658 LASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAV 717
+ NYS + G IA++D+++ A+ ++ L GI+ +L+GD +
Sbjct: 603 MLIAVNYS------------LTGIIAVADTVKDHAKDAIKQLHDMGIEVAMLTGDNKNTA 650
Query: 718 AATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQ 777
A AK+VGI + + + + P++K+ I+ LQ G VAMVGDG+NDAP+L AD+GIA
Sbjct: 651 QAIAKQVGI--DTVIADILPEEKAAQIAKLQQQGKKVAMVGDGVNDAPALVKADIGIA-- 706
Query: 778 IEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGAL 837
I A AA I +LG L + A+ +KAT+ + QNL WA YN+ IPIAA L
Sbjct: 707 IGTGTEVAIEAADITILGGDLMLIPKAIYASKATIRNIRQNLFWAFGYNIAGIPIAALGL 766
Query: 838 LPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
L P ++G MALSS+ VV+N+L L+ E +K
Sbjct: 767 L-------APWVAGAAMALSSVSVVTNALRLKKMRLEPRRK 800
|
Involved in copper export. Staphylococcus aureus (strain USA300 / TCH1516) (taxid: 451516) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: n EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | ||||||
| 343887333 | 872 | P-type ATPase [Citrus unshiu] | 0.963 | 0.975 | 0.967 | 0.0 | |
| 255550185 | 880 | copper-transporting atpase paa1, putativ | 0.984 | 0.987 | 0.753 | 0.0 | |
| 359475978 | 888 | PREDICTED: putative copper-transporting | 0.985 | 0.979 | 0.738 | 0.0 | |
| 42570031 | 883 | P-type ATPase [Arabidopsis thaliana] gi| | 0.980 | 0.980 | 0.720 | 0.0 | |
| 110630091 | 908 | copper P1B-ATPase [Glycine max] | 0.985 | 0.958 | 0.722 | 0.0 | |
| 13374852 | 856 | metal-transporting ATPase-like protein [ | 0.953 | 0.983 | 0.716 | 0.0 | |
| 31616607 | 883 | Paa2 P-type ATPase [Arabidopsis thaliana | 0.980 | 0.980 | 0.718 | 0.0 | |
| 297808191 | 887 | hypothetical protein ARALYDRAFT_910174 [ | 0.980 | 0.976 | 0.717 | 0.0 | |
| 357465867 | 892 | Copper-exporting P-type ATPase A [Medica | 0.962 | 0.952 | 0.726 | 0.0 | |
| 449447171 | 898 | PREDICTED: copper-transporting ATPase PA | 0.937 | 0.922 | 0.733 | 0.0 |
| >gi|343887333|dbj|BAK61879.1| P-type ATPase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 1651 bits (4276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 843/871 (96%), Positives = 845/871 (97%), Gaps = 20/871 (2%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRVDIASRPKRRRRRRVPAVSNSLETRTQPQN 60
MATDLLRLSLSPYPNLVFTYRYTKKFHFDRVDIASRPKRRRRRRVPAVSNSLETRTQPQN
Sbjct: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRVDIASRPKRRRRRRVPAVSNSLETRTQPQN 60
Query: 61 APFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEA 120
APFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTE
Sbjct: 61 APFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEV 120
Query: 121 VEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRV 180
VEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRV
Sbjct: 121 VEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRV 180
Query: 181 ALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGALFGPGRA----S 236
ALAWTLVALCCGSHASHI HSLGIHIAHGPLWELLDNSYVKGGFALGAL GPGR
Sbjct: 181 ALAWTLVALCCGSHASHISHSLGIHIAHGPLWELLDNSYVKGGFALGALIGPGRDLLSDG 240
Query: 237 LMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEE 296
L AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPEL+WDASFFEEPVMLLGFVLLGRSLEE
Sbjct: 241 LRAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELDWDASFFEEPVMLLGFVLLGRSLEE 300
Query: 297 RARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLV 356
RARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLV
Sbjct: 301 RARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLV 360
Query: 357 LPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSN 416
LPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSN
Sbjct: 361 LPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSN 420
Query: 417 SMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLS 476
SMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLS
Sbjct: 421 SMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLS 480
Query: 477 DMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERL 536
DMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERL
Sbjct: 481 DMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERL 540
Query: 537 ARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESL 596
ARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESL
Sbjct: 541 ARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESL 600
Query: 597 NLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSS 656
NLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSS
Sbjct: 601 NLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSS 660
Query: 657 ELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEA 716
ELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEA
Sbjct: 661 ELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEA 720
Query: 717 VAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIAL 776
VAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIAL
Sbjct: 721 VAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIAL 780
Query: 777 QIEAQENAASTAASIILLGNKLSQ----------------VVDALDLAKATMAKVYQNLS 820
QIEAQENAASTAASIILLGNKLSQ VVDALDLAKATMAKVYQNLS
Sbjct: 781 QIEAQENAASTAASIILLGNKLSQIPTLAIQWSPRCMILYVVDALDLAKATMAKVYQNLS 840
Query: 821 WAVAYNVVAIPIAAGALLPQYDFAMTPSLSG 851
WAVAYNVVAIPIAAGALLPQY+FAMTPSLSG
Sbjct: 841 WAVAYNVVAIPIAAGALLPQYEFAMTPSLSG 871
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255550185|ref|XP_002516143.1| copper-transporting atpase paa1, putative [Ricinus communis] gi|223544629|gb|EEF46145.1| copper-transporting atpase paa1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 669/888 (75%), Positives = 755/888 (85%), Gaps = 19/888 (2%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRVDIASRPKRR----RRRRVPAVSNSLE-TR 55
M TDLL+LS+ P P+ F R T FD + PKRR R+ R +SNSL+ +
Sbjct: 1 MTTDLLKLSIFPPPHPKFPCRSTATHRFDYFK-SHLPKRRPLILRQPRYLTLSNSLDIQK 59
Query: 56 TQPQNAPFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIK 115
Q Q+APF+ + DS +LLDV+GMMCGGCV+RVKS+L++D+RV+SV VNMLTETAA++
Sbjct: 60 PQLQDAPFQ---SQQDSPILLDVTGMMCGGCVSRVKSLLSSDERVESVVVNMLTETAAVR 116
Query: 116 LRTE-AVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLV 174
L+ + AV+ + E+ A+S KRL +CGFE K+R G GVAENVKKW+E+ KK+E+L+V
Sbjct: 117 LKRDFAVDSTAEI----ADSFAKRLTDCGFETKKRELGIGVAENVKKWREMVKKKEELIV 172
Query: 175 KSRNRVALAWTLVALCCGSHASHILHSLGIH-IAHGPLWELLDNSYVKGGFALGALFGPG 233
+SRNRV AWTLVALCCGSH SHILHSLGIH AHGP WE+L NSYVKGG ++ AL GPG
Sbjct: 173 RSRNRVVFAWTLVALCCGSHLSHILHSLGIHTFAHGPFWEVLHNSYVKGGLSMAALLGPG 232
Query: 234 RA----SLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVL 289
R L AF+KG+PNMNSLVGFGS+ AF+IS VSLL PEL+WDASFF+EPVMLLGFVL
Sbjct: 233 RDLLFDGLKAFKKGAPNMNSLVGFGSLAAFVISAVSLLNPELKWDASFFDEPVMLLGFVL 292
Query: 290 LGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIR 349
LGRSLEERARIRASSDMNELLSL+S QSRLVI SS+ S AD VLCSDAICVEVPTDD+R
Sbjct: 293 LGRSLEERARIRASSDMNELLSLISMQSRLVINSSDGKSPADTVLCSDAICVEVPTDDVR 352
Query: 350 VGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIE 409
VGD+VLVLPGETIPVDGRV+AGRSVVDESML+GESLPVFKEEG VSAGTINWDGPLRIE
Sbjct: 353 VGDTVLVLPGETIPVDGRVIAGRSVVDESMLTGESLPVFKEEGLKVSAGTINWDGPLRIE 412
Query: 410 ACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQI 469
A STGSNS IS+I MVE+AQGREAPIQRL D+IAGPFVYS+MT+SAATFAFWYYIGSQ+
Sbjct: 413 ASSTGSNSTISRIFRMVEDAQGREAPIQRLVDSIAGPFVYSIMTISAATFAFWYYIGSQV 472
Query: 470 FPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRG 529
FPDVLL+D+AGP+G+ LLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRG
Sbjct: 473 FPDVLLNDIAGPDGDALLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRG 532
Query: 530 GDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAI 589
GDVLERLARIDY+ALDKTGTLTEGKP V VAS Y ESEIL+IAAAVEKTA HPIAKAI
Sbjct: 533 GDVLERLARIDYIALDKTGTLTEGKPVVSAVASTSYKESEILRIAAAVEKTALHPIAKAI 592
Query: 590 VNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEH 649
VN+AESL LT P TRGQL EPGFG L EVDGRLVAVGTL+WV ERF + D SD+++LE
Sbjct: 593 VNEAESLELTIPATRGQLTEPGFGTLAEVDGRLVAVGTLDWVQERFHRTADLSDLRNLEA 652
Query: 650 AVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLL 709
AV+ Q S+ S SNYSK+VVYVGRE EGIIGAIAISD LRHDAE TV LQ KGI T+L+
Sbjct: 653 AVSFQLSKGTSSSNYSKTVVYVGREEEGIIGAIAISDRLRHDAESTVNRLQMKGINTVLV 712
Query: 710 SGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLAL 769
SGDREEAVA A VGIG E+IN+SLTPQQKS VISTLQ +GH VAMVGDGINDAPSLAL
Sbjct: 713 SGDREEAVANIANRVGIGSEFINASLTPQQKSGVISTLQAAGHCVAMVGDGINDAPSLAL 772
Query: 770 ADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVA 829
A+VGIALQ EAQENAAS ASI+LLGN++SQVVDALDLA+ATMAKVYQNLSWA+AYNVVA
Sbjct: 773 AEVGIALQNEAQENAASDVASIVLLGNRISQVVDALDLARATMAKVYQNLSWAIAYNVVA 832
Query: 830 IPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNK 877
IPIAAG LLPQYDFAMTPS+SGGLMALSSIFVV+NSLLLQ HE E ++
Sbjct: 833 IPIAAGVLLPQYDFAMTPSVSGGLMALSSIFVVTNSLLLQLHEPERSR 880
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359475978|ref|XP_002280050.2| PREDICTED: putative copper-transporting ATPase PAA1-like [Vitis vinifera] gi|296081721|emb|CBI20726.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1290 bits (3339), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/895 (73%), Positives = 752/895 (84%), Gaps = 25/895 (2%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRVDIASRPKRRRRRRVPAVS----------- 49
M +DLLR+SL P NL F+Y H +S P+RRR +R+ VS
Sbjct: 1 MTSDLLRISLYPPRNLCFSYDSKSNVH--GFSFSSLPQRRRSQRLWKVSGRRAPNFNFIF 58
Query: 50 -NSLETRTQPQNAPFELPKR-RVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNM 107
+++ R ++ P +R R DS +LLDV+GM+CG CVARVKSVL+AD+RV+S VNM
Sbjct: 59 SKAIDIRAPVKSTPLTEEQRPRGDSPLLLDVTGMVCGACVARVKSVLSADERVESAVVNM 118
Query: 108 LTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAK 167
LTETAA+++R E VEE+ V ESL +RL ECGF K RVSGTGV ENVKKW+E+ +
Sbjct: 119 LTETAAVRIRPEVVEET------VGESLARRLTECGFPTKERVSGTGVEENVKKWREMGE 172
Query: 168 KREDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALG 227
K+E LLVKSRNRVA+AWTLVALCCGSHASHILHSLGIH+ HG WELL NSYVKGG ALG
Sbjct: 173 KKEALLVKSRNRVAVAWTLVALCCGSHASHILHSLGIHVDHGSFWELLHNSYVKGGLALG 232
Query: 228 ALFGPGRA----SLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVM 283
AL GPGR L AF KGSPNMNSLVGFGS+ AF IS+VSL P L+WDASFF+EPVM
Sbjct: 233 ALLGPGRELLFDGLRAFSKGSPNMNSLVGFGSVAAFGISMVSLFNPGLQWDASFFDEPVM 292
Query: 284 LLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEV 343
LLGFVLLGRSLEE+ARIRASSDMN+LLSL+ST+SRLVITSSES SS +++LCSDA+C+EV
Sbjct: 293 LLGFVLLGRSLEEKARIRASSDMNKLLSLISTRSRLVITSSESDSSTNSILCSDAMCIEV 352
Query: 344 PTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWD 403
PTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESML+GESLPVFKEEGF VSAGTINW
Sbjct: 353 PTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLTGESLPVFKEEGFVVSAGTINWG 412
Query: 404 GPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWY 463
GPLRIEA S GSNS ISKIVSMVE+AQGR APIQRLAD+IAGPFVY VMTLSAATF FWY
Sbjct: 413 GPLRIEASSNGSNSTISKIVSMVEDAQGRAAPIQRLADSIAGPFVYIVMTLSAATFTFWY 472
Query: 464 YIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQ 523
Y+G+ IFPDVL +D+AGP+GNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQ
Sbjct: 473 YLGTHIFPDVLFNDIAGPDGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQ 532
Query: 524 GLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATH 583
GLLIRGGDVLERLA +D++A DKTGTLT+GKPAV VAS Y+E EIL+IAAAVEKTA H
Sbjct: 533 GLLIRGGDVLERLASVDHVAFDKTGTLTKGKPAVSAVASLAYEEQEILRIAAAVEKTAVH 592
Query: 584 PIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSD 643
PIAKAIVNKAESLNLT PIT QL EPGFG L EVDGRLVAVG+LEWV +RFQ++ +HSD
Sbjct: 593 PIAKAIVNKAESLNLTIPITTAQLVEPGFGSLAEVDGRLVAVGSLEWVQDRFQRRTNHSD 652
Query: 644 VQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKG 703
+ +LE+A+ H S S SN+S++VVYVGREG+G+IGAIA+ DSLRHDA V LQ+KG
Sbjct: 653 LMNLENAMMHHLSNEVSLSNHSRTVVYVGREGDGVIGAIAVCDSLRHDANSAVTRLQEKG 712
Query: 704 IKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGIND 763
IKT+LLSGDREEAVA AK VGI E+INSSLTPQQKS VI +LQT+GH VAMVGDGIND
Sbjct: 713 IKTILLSGDREEAVATIAKTVGIESEFINSSLTPQQKSGVIKSLQTAGHRVAMVGDGIND 772
Query: 764 APSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAV 823
APSLALADVGIALQ+E+Q++AAS AASIILLGNK+SQV DALDLA+ATMAKVYQNLSWAV
Sbjct: 773 APSLALADVGIALQVESQQSAASDAASIILLGNKISQVADALDLAQATMAKVYQNLSWAV 832
Query: 824 AYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
AYNVVA+PIAAG LLP++D AMTPSL+GGLMALSSIFVV+NS+LLQ H + N+K
Sbjct: 833 AYNVVAVPIAAGVLLPRFDLAMTPSLAGGLMALSSIFVVTNSVLLQLHGSDKNRK 887
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42570031|ref|NP_680181.2| P-type ATPase [Arabidopsis thaliana] gi|79328347|ref|NP_001031920.1| P-type ATPase [Arabidopsis thaliana] gi|385178640|sp|B9DFX7.1|HMA8_ARATH RecName: Full=Copper-transporting ATPase PAA2, chloroplastic; AltName: Full=Protein HEAVY METAL ATPASE 8; Flags: Precursor gi|222423339|dbj|BAH19644.1| AT5G21930 [Arabidopsis thaliana] gi|332005573|gb|AED92956.1| P-type ATPase [Arabidopsis thaliana] gi|332005574|gb|AED92957.1| P-type ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1257 bits (3252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/893 (72%), Positives = 729/893 (81%), Gaps = 27/893 (3%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRV---DIASRPKRRRRRRVPAVSNSLETRTQ 57
MA++LLR L P +L + KF +R SR +R R VSNS+E TQ
Sbjct: 1 MASNLLRFPLPPPSSL---HIRPSKFLVNRCFPRLRRSRIRRHCSRPFFLVSNSVEISTQ 57
Query: 58 PQNAPFELPKRRV--------DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLT 109
FE + + D+ +LLDVSGMMCGGCVARVKSVL +DDRV S VNMLT
Sbjct: 58 S----FESTESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLT 113
Query: 110 ETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKR 169
ETAA+K + E EV + AESL KRL E GFEAKRRVSG GVAENVKKWKE+ K+
Sbjct: 114 ETAAVKFKPEV-----EVTADTAESLAKRLTESGFEAKRRVSGMGVAENVKKWKEMVSKK 168
Query: 170 EDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGAL 229
EDLLVKSRNRVA AWTLVALCCGSH SHILHSLGIHIAHG +W+LL NSYVKGG A+GAL
Sbjct: 169 EDLLVKSRNRVAFAWTLVALCCGSHTSHILHSLGIHIAHGGIWDLLHNSYVKGGLAVGAL 228
Query: 230 FGPGRASLM----AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLL 285
GPGR L AF K SPNMNSLVG GS+ AF ISL+SL+ PELEWDASFF+EPVMLL
Sbjct: 229 LGPGRELLFDGIKAFGKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLL 288
Query: 286 GFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPT 345
GFVLLGRSLEERA+++AS+DMNELLSL+STQSRLVITSS++ + D+VL SD+IC+ V
Sbjct: 289 GFVLLGRSLEERAKLQASTDMNELLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSV 348
Query: 346 DDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGP 405
DDIRVGDS+LVLPGET PVDG VLAGRSVVDESML+GESLPVFKEEG +VSAGTINWDGP
Sbjct: 349 DDIRVGDSLLVLPGETFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGP 408
Query: 406 LRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYI 465
LRI+A STGSNS ISKIV MVE+AQG AP+QRLADAIAGPFVY++M+LSA TFAFWYY+
Sbjct: 409 LRIKASSTGSNSTISKIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYV 468
Query: 466 GSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGL 525
GS IFPDVLL+D+AGP+G+ L LSLKL+VDVLVVSCPCALGLATPTAIL+GTSLGAK+G
Sbjct: 469 GSHIFPDVLLNDIAGPDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGY 528
Query: 526 LIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPI 585
LIRGGDVLERLA ID +ALDKTGTLTEG+P V VAS Y+E E+LK+AAAVEKTATHPI
Sbjct: 529 LIRGGDVLERLASIDCVALDKTGTLTEGRPVVSGVASLGYEEQEVLKMAAAVEKTATHPI 588
Query: 586 AKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQ 645
AKAIVN+AESLNL +P TRGQL EPGFG L E+DGR VAVG+LEWV +RF K+ D SD+
Sbjct: 589 AKAIVNEAESLNLKTPETRGQLTEPGFGTLAEIDGRFVAVGSLEWVSDRFLKKNDSSDMV 648
Query: 646 HLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIK 705
LE + H+ S +S S YSK+VVYVGREGEGIIGAIAISD LR DAE TV LQ+KGIK
Sbjct: 649 KLESLLDHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTVARLQEKGIK 708
Query: 706 TLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAP 765
T+LLSGDRE AVA AK VGI E N SL+P++K E IS LQ+SGH VAMVGDGINDAP
Sbjct: 709 TVLLSGDREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAMVGDGINDAP 768
Query: 766 SLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAY 825
SLA ADVGIAL+IEAQENAAS AAS+IL+ NKLS VVDAL LA+ATM+KVYQNL+WA+AY
Sbjct: 769 SLAQADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAWAIAY 828
Query: 826 NVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
NV++IPIAAG LLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ H+ E++K
Sbjct: 829 NVISIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETSKN 881
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|110630091|gb|ABD64063.1| copper P1B-ATPase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1256 bits (3251), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 647/896 (72%), Positives = 744/896 (83%), Gaps = 26/896 (2%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRVDIASRPKRRRRRRVP----------AVSN 50
MAT L RL L P L F + HF I+ P +R R R +VSN
Sbjct: 1 MATHLFRLPLFSQPKLSFNHTPNHALHF----ISPLPAKRHRTRNRHRRRILRPPFSVSN 56
Query: 51 SLETRTQPQNAP-FELPKRR---VDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVN 106
S T P +P F L + R DS VLLDV+GMMCG C++RVK +L+ADDRVDS VN
Sbjct: 57 SFRTPRAPDGSPEFSLLQSRREAKDSPVLLDVTGMMCGACISRVKKILSADDRVDSAVVN 116
Query: 107 MLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELA 166
MLT+TAA+KL+ E+E +VAESL +RL +CGF AKRR SG+GVAE+V+KWKE+
Sbjct: 117 MLTDTAAVKLKPL---EAEVDSASVAESLARRLSDCGFPAKRRASGSGVAESVRKWKEMV 173
Query: 167 KKREDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFAL 226
KK+EDL+ KSRNRVA AWTLVALCCGSHASHI HSLGIHIAHGPL E+L +SY+KGG AL
Sbjct: 174 KKKEDLVAKSRNRVAFAWTLVALCCGSHASHIFHSLGIHIAHGPLMEILHSSYLKGGLAL 233
Query: 227 GALFGPGRASLM----AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPV 282
G+L GPGR L AF+KGSPNMNSLVGFGS+ AF+IS +SLL P L WDASFF+EPV
Sbjct: 234 GSLLGPGRELLFDGLNAFKKGSPNMNSLVGFGSVAAFIISSISLLNPGLAWDASFFDEPV 293
Query: 283 MLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVE 342
MLLGFVLLGRSLEE+ARI+ASSDMNELLSL+STQSRLVITS+E S D VLCSDAICVE
Sbjct: 294 MLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSTEGSPSTDTVLCSDAICVE 353
Query: 343 VPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINW 402
VPTDDIRVGDSVLVLPGETIP+DG V++GRSV+DESML+GESLPVFKE+G TVSAGTINW
Sbjct: 354 VPTDDIRVGDSVLVLPGETIPIDGTVISGRSVIDESMLTGESLPVFKEKGLTVSAGTINW 413
Query: 403 DGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFW 462
DGPLRIEA STGSN+MISKIV MVE+AQ REAP+QRLAD+IAGPFVYSVMTLSAATFAFW
Sbjct: 414 DGPLRIEASSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVYSVMTLSAATFAFW 473
Query: 463 YYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAK 522
Y++GS IFPDVLL+D+AGP G+PLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGA+
Sbjct: 474 YFVGSHIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAR 533
Query: 523 QGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTAT 582
+GLLIRGGDVLERLA I+Y+ALDKTGTLT+GKP V ++S +Y ESEIL++AAAVEKTA+
Sbjct: 534 KGLLIRGGDVLERLAGINYIALDKTGTLTKGKPVVSAISSILYGESEILRLAAAVEKTAS 593
Query: 583 HPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHS 642
HPIAKAIVNKAESL L P+T+GQL EPGFG L EVDG L+AVG+LEWV+ER Q + + S
Sbjct: 594 HPIAKAIVNKAESLELVLPVTKGQLVEPGFGTLAEVDGHLIAVGSLEWVHERLQTRANPS 653
Query: 643 DVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQK 702
D+ +LE+++ + S S S YSK+VVYVGREGEGIIGAIAISD++R DAE T+ L+QK
Sbjct: 654 DLTNLENSLMNHSLNTTS-SKYSKTVVYVGREGEGIIGAIAISDTVREDAESTITRLKQK 712
Query: 703 GIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGIN 762
GIKT+LLSGDREEAVA A VGI +++ +SL+PQQKS IS+L+ +GHHVAMVGDGIN
Sbjct: 713 GIKTVLLSGDREEAVATVADTVGIENDFVKASLSPQQKSGFISSLKAAGHHVAMVGDGIN 772
Query: 763 DAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWA 822
DAPSLA+ADVGIALQ EAQENAAS AASIILLGNK+SQVVDALDLA+ATM KVYQNL WA
Sbjct: 773 DAPSLAVADVGIALQNEAQENAASDAASIILLGNKISQVVDALDLAQATMGKVYQNLCWA 832
Query: 823 VAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
VAYNVVAIPIAAG LLP +DFAMTPSLSGGLMALSSIFVV NSLLLQ H + ++K
Sbjct: 833 VAYNVVAIPIAAGVLLPHFDFAMTPSLSGGLMALSSIFVVGNSLLLQLHGSQISRK 888
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|13374852|emb|CAC34486.1| metal-transporting ATPase-like protein [Arabidopsis thaliana] gi|29294054|gb|AAO73891.1| ATPase, E1-E2 type family [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1255 bits (3248), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 638/890 (71%), Positives = 722/890 (81%), Gaps = 48/890 (5%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRVDIASRPKRRRRRRVPAVSNSLETRTQPQN 60
MA++LLR L P +L H RP +SNS+E TQ
Sbjct: 1 MASNLLRFPLPPPSSL----------HI-------RP----------ISNSVEISTQS-- 31
Query: 61 APFELPKRRV--------DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETA 112
FE + + D+ +LLDVSGMMCGGCVARVKSVL +DDRV S VNMLTETA
Sbjct: 32 --FESTESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETA 89
Query: 113 AIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDL 172
A+K + E EV + AESL KRL E GFEAKRRVSG GVAENVKKWKE+ K+EDL
Sbjct: 90 AVKFKPEV-----EVTADTAESLAKRLTESGFEAKRRVSGMGVAENVKKWKEMVSKKEDL 144
Query: 173 LVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGALFGP 232
LVKSRNRVA AWTLVALCCGSH SHILHSLGIHIAHG +W+LL NSYVKGG A+GAL GP
Sbjct: 145 LVKSRNRVAFAWTLVALCCGSHTSHILHSLGIHIAHGGIWDLLHNSYVKGGLAVGALLGP 204
Query: 233 GRASLM----AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFV 288
GR L AF K SPNMNSLVG GS+ AF ISL+SL+ PELEWDASFF+EPVMLLGFV
Sbjct: 205 GRELLFDGIKAFGKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLLGFV 264
Query: 289 LLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDI 348
LLGRSLEERA+++AS+DMNELLSL+STQSRLVITSS++ + D+VL SD+IC+ V DDI
Sbjct: 265 LLGRSLEERAKLQASTDMNELLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSVDDI 324
Query: 349 RVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRI 408
RVGDS+LVLPGET PVDG VLAGRSVVDESML+GESLPVFKEEG +VSAGTINWDGPLRI
Sbjct: 325 RVGDSLLVLPGETFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGPLRI 384
Query: 409 EACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQ 468
+A STGSNS ISKIV MVE+AQG AP+QRLADAIAGPFVY++M+LSA TFAFWYY+GS
Sbjct: 385 KASSTGSNSTISKIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYVGSH 444
Query: 469 IFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIR 528
IFPDVLL+D+AGP+G+ L LSLKL+VDVLVVSCPCALGLATPTAIL+GTSLGAK+G LIR
Sbjct: 445 IFPDVLLNDIAGPDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGYLIR 504
Query: 529 GGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKA 588
GGDVLERLA ID +ALDKTGTLTEG+P V VAS Y+E E+LK+AAAVEKTATHPIAKA
Sbjct: 505 GGDVLERLASIDCVALDKTGTLTEGRPVVSGVASLGYEEQEVLKMAAAVEKTATHPIAKA 564
Query: 589 IVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLE 648
IVN+AESLNL +P TRGQL EPGFG L E+DGR VAVG+LEWV +RF K+ D SD+ LE
Sbjct: 565 IVNEAESLNLKTPETRGQLTEPGFGTLAEIDGRFVAVGSLEWVSDRFLKKNDSSDMVKLE 624
Query: 649 HAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLL 708
+ H+ S +S S YSK+VVYVGREGEGIIGAIAISD LR DAE TV LQ+KGIKT+L
Sbjct: 625 SLLDHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTVARLQEKGIKTVL 684
Query: 709 LSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLA 768
LSGDRE AVA AK VGI E N SL+P++K E IS LQ+SGH VAMVGDGINDAPSLA
Sbjct: 685 LSGDREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAMVGDGINDAPSLA 744
Query: 769 LADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVV 828
ADVGIAL+IEAQENAAS AAS+IL+ NKLS VVDAL LA+ATM+KVYQNL+WA+AYNV+
Sbjct: 745 QADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAWAIAYNVI 804
Query: 829 AIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
+IPIAAG LLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ H+ E++K
Sbjct: 805 SIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETSKN 854
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|31616607|gb|AAP55720.1| Paa2 P-type ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1253 bits (3242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 642/893 (71%), Positives = 728/893 (81%), Gaps = 27/893 (3%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRV---DIASRPKRRRRRRVPAVSNSLETRTQ 57
MA++LLR L P +L + KF +R SR +R R VSNS+E TQ
Sbjct: 1 MASNLLRFPLPPPSSL---HIRPSKFLVNRCFPRLRRSRIRRHCSRPFFLVSNSVEISTQ 57
Query: 58 PQNAPFELPKRRV--------DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLT 109
FE + + D+ +LLDVSGMMCGGCVARVKSVL +DDRV S VNMLT
Sbjct: 58 S----FESTESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLT 113
Query: 110 ETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKR 169
ETAA+K + E EV + AESL KRL E GFEAKRRVSG GVAENVKKWKE+ K+
Sbjct: 114 ETAAVKFKPEV-----EVTADTAESLAKRLTESGFEAKRRVSGMGVAENVKKWKEMVSKK 168
Query: 170 EDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGAL 229
EDLLVKSRNRVA AWTLVALCCGSH SHILHSLGIHIAHG +W+LL NSYVKGG A+GAL
Sbjct: 169 EDLLVKSRNRVAFAWTLVALCCGSHTSHILHSLGIHIAHGGIWDLLHNSYVKGGLAVGAL 228
Query: 230 FGPGRASLM----AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLL 285
GPGR L AF K SPNMNSLVG GS+ AF ISL+SL+ PELEWDASFF+EPVMLL
Sbjct: 229 LGPGRELLFDGIKAFGKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLL 288
Query: 286 GFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPT 345
GFVLLGRSLEERA+++AS+DMNE LSL+STQSRLVITSS++ + D+VL SD+IC+ V
Sbjct: 289 GFVLLGRSLEERAKLQASTDMNEPLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSV 348
Query: 346 DDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGP 405
DDIRVGDS+LVLPGET PVDG VLAGRSVVDESML+GESLPVFKEEG +VSAGTINWDGP
Sbjct: 349 DDIRVGDSLLVLPGETFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGP 408
Query: 406 LRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYI 465
LRI+A STGSNS ISKIV MVE+AQG AP+QRLADAIAGPFVY++M+LSA TFAFWYY+
Sbjct: 409 LRIKASSTGSNSTISKIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYV 468
Query: 466 GSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGL 525
GS IFPDVLL+D+AGP+G+ L LSLKL+VDVLVVSCPCALGLATPTAIL+GTSLGAK+G
Sbjct: 469 GSHIFPDVLLNDIAGPDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGY 528
Query: 526 LIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPI 585
LIRGGDVLERLA ID +ALDKTGTLTEG+P V VAS Y+E E+LK+AAAVEKTATHPI
Sbjct: 529 LIRGGDVLERLASIDCVALDKTGTLTEGRPVVSGVASLGYEEQEVLKMAAAVEKTATHPI 588
Query: 586 AKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQ 645
AKAIVN+AESLNL +P TRGQL EPGFG L E+DGR VAVG+LEWV +RF K+ D SD+
Sbjct: 589 AKAIVNEAESLNLKTPETRGQLTEPGFGTLAEIDGRFVAVGSLEWVSDRFLKKNDSSDMV 648
Query: 646 HLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIK 705
LE + H+ S +S S YSK+VVYVGREGEGIIGAIAISD LR DAE TV LQ+KGIK
Sbjct: 649 KLESLLDHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTVARLQEKGIK 708
Query: 706 TLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAP 765
T+LLSGDRE AVA AK VGI E N SL+P++K E IS LQ+SGH VAMVGDGINDAP
Sbjct: 709 TVLLSGDREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAMVGDGINDAP 768
Query: 766 SLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAY 825
SLA ADVGIAL+IEAQENAAS AAS+IL+ NKLS VVDAL LA+ATM+KVYQNL+WA+AY
Sbjct: 769 SLAQADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAWAIAY 828
Query: 826 NVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
NV++IPIAAG LLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ H+ E++K
Sbjct: 829 NVISIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETSKN 881
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297808191|ref|XP_002871979.1| hypothetical protein ARALYDRAFT_910174 [Arabidopsis lyrata subsp. lyrata] gi|297317816|gb|EFH48238.1| hypothetical protein ARALYDRAFT_910174 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 641/893 (71%), Positives = 727/893 (81%), Gaps = 27/893 (3%)
Query: 1 MATDLLRLSLSPYPNLVFTYRYTKKFHFDRVDIASR-------PKRRRRRRVPA--VSNS 51
MAT+LLR L P +L + + F V +R + RR P VSNS
Sbjct: 1 MATNLLRCPLPPPSSL-----HIRPSKFLDVKFVNRCFPRQRRSRIRRHCSTPGLLVSNS 55
Query: 52 LETRTQPQNAPFELPKRRV----DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNM 107
+E TQ + + D+ +LL VSGMMCGGCVARVKSVL +DDRV S VNM
Sbjct: 56 VEISTQSFESTESSIESSKSVTSDTPILLQVSGMMCGGCVARVKSVLMSDDRVASAVVNM 115
Query: 108 LTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAK 167
LTETAA+KL+ E EV + AESL KRL E GFEAKRRVSG GVAENVKKWKE+
Sbjct: 116 LTETAAVKLKPEV-----EVTADAAESLAKRLTESGFEAKRRVSGMGVAENVKKWKEMVS 170
Query: 168 KREDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALG 227
K+EDLLVKSRNRVA AWTLVALCCGSH SHILHSLGIHIAHG +W+LL NSYVKGG A+G
Sbjct: 171 KKEDLLVKSRNRVAFAWTLVALCCGSHTSHILHSLGIHIAHGGIWDLLHNSYVKGGLAVG 230
Query: 228 ALFGPGRASLM----AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVM 283
AL GPGR L AF K SPNMNSLVG GS+ AF ISL+SL+ PELEWDASFFEEPVM
Sbjct: 231 ALLGPGRDLLFDGIKAFGKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFEEPVM 290
Query: 284 LLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEV 343
LLGFVLLGRSLEERA+++ASSDMNELLSL+STQSRLVITSS++ ++AD+VL SD+IC+ V
Sbjct: 291 LLGFVLLGRSLEERAKLKASSDMNELLSLISTQSRLVITSSDNNTAADSVLSSDSICINV 350
Query: 344 PTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWD 403
DDIRVGDS+LVLPGET PVDG VLAGRSVVDESML+GESLPVFKEEG +VSAGTINWD
Sbjct: 351 SVDDIRVGDSLLVLPGETFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWD 410
Query: 404 GPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWY 463
GPLRI+A STGSNS ISKIV MVE+AQG AP+QRLADAIAGPFVY++M+LSA TFAFWY
Sbjct: 411 GPLRIKASSTGSNSTISKIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAVTFAFWY 470
Query: 464 YIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQ 523
Y+GS IFPDVLL+D+AGP+G+ L LSLKL+VDVLVVSCPCALGLATPTAIL+GTSLGAK+
Sbjct: 471 YVGSHIFPDVLLNDIAGPDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKR 530
Query: 524 GLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATH 583
G LIRGGDVLERLA ID +ALDKTGTLTEG+P V VAS Y+E E+LK+AAAVEKTATH
Sbjct: 531 GYLIRGGDVLERLASIDCVALDKTGTLTEGRPVVAGVASLRYEEQEVLKVAAAVEKTATH 590
Query: 584 PIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSD 643
PIAKAIVN+AESLNL +P TRGQL EPGFG L EVDGRLVAVG+LEWV +RF K+ D SD
Sbjct: 591 PIAKAIVNEAESLNLKTPETRGQLTEPGFGTLAEVDGRLVAVGSLEWVSDRFLKKNDSSD 650
Query: 644 VQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKG 703
+ LE + ++ S +S S YSK+VVYVGRE EGIIGAIAISD LR DA TV LQ+KG
Sbjct: 651 MVKLESFLDNKLSNASSTSRYSKTVVYVGREEEGIIGAIAISDCLRQDAAFTVARLQEKG 710
Query: 704 IKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGIND 763
IKT+LLSGDRE AVA AK VGI E N SL+P++K E I+ LQ+SGH VAMVGDGIND
Sbjct: 711 IKTVLLSGDREGAVATVAKNVGIESESTNYSLSPEKKFEFITNLQSSGHRVAMVGDGIND 770
Query: 764 APSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAV 823
APSLA ADVGIAL+IEAQENAAS AAS+IL+ NKLS VVDAL LA+ATM+KVYQNL+WA+
Sbjct: 771 APSLAQADVGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAWAI 830
Query: 824 AYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESN 876
AYNV++IPIAAG LLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ H+ E++
Sbjct: 831 AYNVISIPIAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETS 883
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357465867|ref|XP_003603218.1| Copper-exporting P-type ATPase A [Medicago truncatula] gi|355492266|gb|AES73469.1| Copper-exporting P-type ATPase A [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1237 bits (3201), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 637/877 (72%), Positives = 732/877 (83%), Gaps = 27/877 (3%)
Query: 14 PNLVFTYRYTKKFHFDRVDIASRPKR----------RRRRRVPAVSNSLETR-----TQP 58
PN F Y + + DR I+ P + + R + +VSN+ T ++
Sbjct: 14 PNFRFNYAF--NLNHDRHFISLLPTKRRRNRNNHRRKILRPLLSVSNTFSTEIRSPESES 71
Query: 59 QNAPFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRT 118
++ + + DS VLLDV+GMMCGGCV+RVK++L++DDRVDSV VNMLTETAA+KL+
Sbjct: 72 ESFLLQAQTQTKDSPVLLDVTGMMCGGCVSRVKTILSSDDRVDSVVVNMLTETAAVKLK- 130
Query: 119 EAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRN 178
+ EE +VA+ L +RL CGF KRR SG GV+ENV+KWKEL KK+E+LL KSRN
Sbjct: 131 ----KLEEESTSVADGLARRLTGCGFPTKRRESGLGVSENVRKWKELVKKKEELLAKSRN 186
Query: 179 RVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGALFGPGRA--- 235
RVA AWTLVALCCGSHASHI HSLGIHIAHGP WE L NSYVKGG ALGAL GPG+
Sbjct: 187 RVAFAWTLVALCCGSHASHIFHSLGIHIAHGPFWEFLHNSYVKGGLALGALLGPGKDLLF 246
Query: 236 -SLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSL 294
L+AF+KGSPNMNSLVGFGSI AF+IS +SLL PEL WDASFF+EPVMLLGFVLLGRSL
Sbjct: 247 DGLLAFKKGSPNMNSLVGFGSIAAFIISSISLLNPELAWDASFFDEPVMLLGFVLLGRSL 306
Query: 295 EERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSV 354
EE+ARI+ASSDMNELLSL+STQSRLVITSSE S D+VL SDAICVEVPTDDIRVGDSV
Sbjct: 307 EEKARIQASSDMNELLSLISTQSRLVITSSEGSPSTDSVLSSDAICVEVPTDDIRVGDSV 366
Query: 355 LVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTG 414
LVLPGETIP+DGRV+AGRSVVDESML+GESLPVFKEEG TVSAGTINWDGPLRIE+ STG
Sbjct: 367 LVLPGETIPIDGRVIAGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIESSSTG 426
Query: 415 SNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVL 474
SN+MISKIV MVE+AQ REAP+QRLAD+IAGPFV+S+M LSAATFAFWY+ G+ IFPDVL
Sbjct: 427 SNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVFSIMALSAATFAFWYFAGTHIFPDVL 486
Query: 475 LSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLE 534
L+D+AGP G+PLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAK+GLLIRGGDVLE
Sbjct: 487 LNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKKGLLIRGGDVLE 546
Query: 535 RLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAE 594
RLA ++Y+ALDKTGTLT GKP V + S Y ESEIL IAAAVEKTA+HPIAKAI+NKAE
Sbjct: 547 RLAGVNYIALDKTGTLTRGKPVVSAIGSIHYGESEILHIAAAVEKTASHPIAKAIINKAE 606
Query: 595 SLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQ 654
SL L P T+GQ+ EPGFG L E+DGRLVAVG+LEWV+ERF + + SD+ +LE A+ +
Sbjct: 607 SLELVLPPTKGQIVEPGFGTLAEIDGRLVAVGSLEWVHERFNTRMNPSDLMNLERALMNH 666
Query: 655 SSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDRE 714
SS +S S YSK+VVYVGREGEGIIGAIAISD +R DAE TV L++KGIKT+LLSGDRE
Sbjct: 667 SSSTSS-SKYSKTVVYVGREGEGIIGAIAISDIVREDAESTVMRLKKKGIKTVLLSGDRE 725
Query: 715 EAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGI 774
EAVA A+ VGI +++ +SL+PQQKS IS+L+ +GHHVAMVGDGINDAPSLA ADVGI
Sbjct: 726 EAVATIAETVGIENDFVKASLSPQQKSAFISSLKAAGHHVAMVGDGINDAPSLAAADVGI 785
Query: 775 ALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAA 834
ALQ EAQENAAS AASIILLGNK+SQV+DALDLA+ATMAKVYQNLSWAVAYNV+AIPIAA
Sbjct: 786 ALQNEAQENAASDAASIILLGNKISQVIDALDLAQATMAKVYQNLSWAVAYNVIAIPIAA 845
Query: 835 GALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFH 871
G LLPQ+DFAMTPSLSGGLMA+SSI VVSNSLLL+ H
Sbjct: 846 GVLLPQFDFAMTPSLSGGLMAMSSILVVSNSLLLKLH 882
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449447171|ref|XP_004141342.1| PREDICTED: copper-transporting ATPase PAA2, chloroplastic-like isoform 2 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1235 bits (3195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 613/836 (73%), Positives = 720/836 (86%), Gaps = 8/836 (0%)
Query: 48 VSNSLETRTQPQNAPFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNM 107
VSNSL QN F+ +RR + +VLLDVSGMMCG CV+RVKS+L++DDRVDSV VNM
Sbjct: 64 VSNSLGAEPLAQNTLFQ-QERRDELSVLLDVSGMMCGACVSRVKSILSSDDRVDSVVVNM 122
Query: 108 LTETAAIKLRT-EAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKWKELA 166
LTETAAI+LR+ E V E++ VN VAESL +RL +CGF R S GVAENV+KWK++
Sbjct: 123 LTETAAIRLRSGEVVAEADSAVN-VAESLARRLTDCGFPTSLRNSELGVAENVRKWKDMV 181
Query: 167 KKREDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFAL 226
+K+ +LL+KSRNRVA+AWTLVALCCGSHASHILH LGIHI +GPL E+L NSYVKG FAL
Sbjct: 182 EKKRELLIKSRNRVAIAWTLVALCCGSHASHILHPLGIHIHNGPLMEILHNSYVKGCFAL 241
Query: 227 GALFGPGRA----SLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPV 282
AL GPGR L AFRKGSPNMNSLVGFG++ AF+IS VSLL P L+WDASFF+EPV
Sbjct: 242 VALLGPGRDLLFDGLRAFRKGSPNMNSLVGFGAVAAFIISAVSLLNPALDWDASFFDEPV 301
Query: 283 MLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVE 342
MLL FVLLGR+LEERAR++ASSDMNELLSL+S+ SRLVIT SE SS +VLCSDA+C++
Sbjct: 302 MLLAFVLLGRTLEERARVKASSDMNELLSLISSHSRLVITPSEGNSSTTDVLCSDAMCIK 361
Query: 343 VPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINW 402
V TDDIRVGDSVLV PGET+PVDG+VLAGRSVVDESML+GESLPVFKE G VSAGT+NW
Sbjct: 362 VSTDDIRVGDSVLVFPGETVPVDGKVLAGRSVVDESMLTGESLPVFKEAGLMVSAGTVNW 421
Query: 403 DGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFW 462
DGPLRIEA STG NS ISKIV MVE+AQG EAPIQRLAD+IAGPFVY+V+TLS ATF FW
Sbjct: 422 DGPLRIEASSTGLNSTISKIVRMVEDAQGHEAPIQRLADSIAGPFVYTVLTLSVATFTFW 481
Query: 463 YYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAK 522
Y G++IFPDVL++D+AGP+G+PLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGA+
Sbjct: 482 YCFGTRIFPDVLINDIAGPDGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAR 541
Query: 523 QGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTAT 582
+GLLIRGGDVLERLA ID +ALDKTGTLTEGKP V +V SFVY E +IL++AAAVEKTA+
Sbjct: 542 RGLLIRGGDVLERLANIDCVALDKTGTLTEGKPTVSSVVSFVYGEEDILQVAAAVEKTAS 601
Query: 583 HPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHS 642
HPIAKAI++KAESLNLT P+TRGQL EPGFG V+GRLVAVG+LEWV +RF+K+
Sbjct: 602 HPIAKAIIDKAESLNLTIPVTRGQLVEPGFGSFANVNGRLVAVGSLEWVNDRFEKKASTF 661
Query: 643 DVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQK 702
D+++LEH+V ++S + S SN SK+VVYVG EGEGIIGAI ISD LR+DAE TV LQ+K
Sbjct: 662 DLKNLEHSV-YRSLKGISSSNNSKTVVYVGSEGEGIIGAIVISDQLRYDAESTVNRLQKK 720
Query: 703 GIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGIN 762
GI+T+LLSGDREEAVA+ AK VGI +E+++SSLTPQ KS++ISTL+++GH VAMVGDGIN
Sbjct: 721 GIRTVLLSGDREEAVASVAKTVGIEEEFVHSSLTPQGKSDLISTLKSAGHRVAMVGDGIN 780
Query: 763 DAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWA 822
DAPSLA +DVGIALQ+E+ ENAAS AASI+LLGN++SQ+VDA++LA+ATM+KVYQNLSWA
Sbjct: 781 DAPSLASSDVGIALQLESHENAASNAASILLLGNRISQLVDAMELAQATMSKVYQNLSWA 840
Query: 823 VAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKK 878
+AYN VAIPIAAG LLP +DFAMTPSLSGGLMALSSIFVV+NSLLLQ H + K+
Sbjct: 841 IAYNAVAIPIAAGVLLPGFDFAMTPSLSGGLMALSSIFVVTNSLLLQIHAPKEAKR 896
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 883 | ||||||
| TAIR|locus:504956435 | 883 | PAA2 "P-type ATPase of Arabido | 0.986 | 0.986 | 0.678 | 1.2e-301 | |
| TAIR|locus:2119265 | 949 | PAA1 "P-type ATP-ase 1" [Arabi | 0.793 | 0.738 | 0.409 | 7.4e-137 | |
| TIGR_CMR|CHY_0940 | 838 | CHY_0940 "copper-translocating | 0.679 | 0.715 | 0.351 | 3.2e-102 | |
| TIGR_CMR|GSU_2452 | 797 | GSU_2452 "copper-translocating | 0.415 | 0.460 | 0.382 | 3.9e-102 | |
| WB|WBGene00000834 | 1238 | cua-1 [Caenorhabditis elegans | 0.424 | 0.302 | 0.374 | 5.5e-97 | |
| UNIPROTKB|G5EE14 | 1238 | cua-1 "Copper transporting ATP | 0.424 | 0.302 | 0.374 | 5.5e-97 | |
| TAIR|locus:2156354 | 1001 | RAN1 "RESPONSIVE-TO-ANTAGONIST | 0.694 | 0.612 | 0.372 | 1.1e-95 | |
| UNIPROTKB|G5ED40 | 1116 | cua-1 "Protein CUA-1, isoform | 0.424 | 0.336 | 0.374 | 1.1e-94 | |
| UNIPROTKB|Q9KPZ7 | 915 | copA "Copper-exporting P-type | 0.413 | 0.398 | 0.355 | 6.6e-94 | |
| TIGR_CMR|VC_2215 | 915 | VC_2215 "cation transport ATPa | 0.413 | 0.398 | 0.355 | 6.6e-94 |
| TAIR|locus:504956435 PAA2 "P-type ATPase of Arabidopsis 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2895 (1024.1 bits), Expect = 1.2e-301, P = 1.2e-301
Identities = 601/886 (67%), Positives = 685/886 (77%)
Query: 1 MATDLLRLSLSPYPNL-VFTYRYTKKFHFDRVDIASRPKXXXXXXVPAVSNSLETRTQP- 58
MA++LLR L P +L + ++ F R+ SR + VSNS+E TQ
Sbjct: 1 MASNLLRFPLPPPSSLHIRPSKFLVNRCFPRLR-RSRIRRHCSRPFFLVSNSVEISTQSF 59
Query: 59 --QNAPFELPKRRV-DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIK 115
+ E K D+ +LLDVSGMMCGGCVARVKSVL +DDRV S VNMLTETAA+K
Sbjct: 60 ESTESSIESVKSITSDTPILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVK 119
Query: 116 LRTXXXXXXXXXXXXXXXXLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVK 175
+ L KRL E GFEAKRRVSG GVAENVKKWKE+ K+EDLLVK
Sbjct: 120 FKPEVEVTADTAES-----LAKRLTESGFEAKRRVSGMGVAENVKKWKEMVSKKEDLLVK 174
Query: 176 SRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKXXXXXXXXXXPGRA 235
SRNRVA AWTLVALCCGSH SHILHSLGIHIAHG +W+LL NSYVK PGR
Sbjct: 175 SRNRVAFAWTLVALCCGSHTSHILHSLGIHIAHGGIWDLLHNSYVKGGLAVGALLGPGRE 234
Query: 236 SLM----AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLG 291
L AF K SPNMNSLVG GS+ AF ISL+SL+ PELEWDASFF+EPVMLLGFVLLG
Sbjct: 235 LLFDGIKAFGKRSPNMNSLVGLGSMAAFSISLISLVNPELEWDASFFDEPVMLLGFVLLG 294
Query: 292 RSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVG 351
RSLEERA+++AS+DMNELLSL+STQSRLVITSS++ + D+VL SD+IC+ V DDIRVG
Sbjct: 295 RSLEERAKLQASTDMNELLSLISTQSRLVITSSDNNTPVDSVLSSDSICINVSVDDIRVG 354
Query: 352 DSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEAC 411
DS+LVLPGET PVDG VLAGRSVVDESML+GESLPVFKEEG +VSAGTINWDGPLRI+A
Sbjct: 355 DSLLVLPGETFPVDGSVLAGRSVVDESMLTGESLPVFKEEGCSVSAGTINWDGPLRIKAS 414
Query: 412 STGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFP 471
STGSNS ISKIV MVE+AQG AP+QRLADAIAGPFVY++M+LSA TFAFWYY+GS IFP
Sbjct: 415 STGSNSTISKIVRMVEDAQGNAAPVQRLADAIAGPFVYTIMSLSAMTFAFWYYVGSHIFP 474
Query: 472 DVLLSDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGGD 531
DVLL+D+AGP+G+ CPCALGLATPTAIL+GTSLGAK+G LIRGGD
Sbjct: 475 DVLLNDIAGPDGDALALSLKLAVDVLVVSCPCALGLATPTAILIGTSLGAKRGYLIRGGD 534
Query: 532 VLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVN 591
VLERLA ID +ALDKTGTLTEG+P V VAS Y+E E+LK+AAAVEKTATHPIAKAIVN
Sbjct: 535 VLERLASIDCVALDKTGTLTEGRPVVSGVASLGYEEQEVLKMAAAVEKTATHPIAKAIVN 594
Query: 592 KAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAV 651
+AESLNL +P TRGQL EPGFG L E+DGR VAVG+LEWV +RF K+ D SD+ LE +
Sbjct: 595 EAESLNLKTPETRGQLTEPGFGTLAEIDGRFVAVGSLEWVSDRFLKKNDSSDMVKLESLL 654
Query: 652 THQSSELASPSNYSKSVVYVXXXXXXXXXXXXXSDSLRHDAEHTVRSLQQKGIKTLLLSG 711
H+ S +S S YSK+VVYV SD LR DAE TV LQ+KGIKT+LLSG
Sbjct: 655 DHKLSNTSSTSRYSKTVVYVGREGEGIIGAIAISDCLRQDAEFTVARLQEKGIKTVLLSG 714
Query: 712 DREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD 771
DRE AVA AK VGI E N SL+P++K E IS LQ+SGH VAMVGDGINDAPSLA AD
Sbjct: 715 DREGAVATVAKNVGIKSESTNYSLSPEKKFEFISNLQSSGHRVAMVGDGINDAPSLAQAD 774
Query: 772 VGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIP 831
VGIAL+IEAQENAAS AAS+IL+ NKLS VVDAL LA+ATM+KVYQNL+WA+AYNV++IP
Sbjct: 775 VGIALKIEAQENAASNAASVILVRNKLSHVVDALSLAQATMSKVYQNLAWAIAYNVISIP 834
Query: 832 IAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNK 877
IAAG LLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ H+ E++K
Sbjct: 835 IAAGVLLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQLHKSETSK 880
|
|
| TAIR|locus:2119265 PAA1 "P-type ATP-ase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1340 (476.8 bits), Expect = 7.4e-137, P = 7.4e-137
Identities = 312/761 (40%), Positives = 445/761 (58%)
Query: 135 LGKRLMECGFEAKRRVSGTGVAENV-KKWKELAKKREDLLVKSRNRVALAWTLVALCCGS 193
L L CGF++ R V EN K ++ K ++ L +S +A++W L A+C
Sbjct: 210 LANHLTNCGFQSTPRDL---VTENFFKVFETKTKDKQARLKESGRELAVSWALCAVCL-- 264
Query: 194 HASHILHSLGIHIAHGPLWELLDNSYVKXXXXXXXXXXPGRASLM----AFRKGSPNMNS 249
H+ H LG++ P + ++ PGR ++ + KGSPNMN+
Sbjct: 265 -VGHLTHFLGVN---APWIHAIHSTGFHVSLCLITLLGPGRKLVLDGIKSLLKGSPNMNT 320
Query: 250 LVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNEL 309
LVG G++ +F +S ++ + P+L W +FFEEPVML+ FVLLGR+LE+RA+I+A+SDM L
Sbjct: 321 LVGLGALSSFSVSSLAAMIPKLGWK-TFFEEPVMLIAFVLLGRNLEQRAKIKATSDMTGL 379
Query: 310 LSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVL 369
LS++ +++RL++ S+ VEVP + + VGD V++LPG+ +P DG V
Sbjct: 380 LSVLPSKARLLLDGDLQNST-----------VEVPCNSLSVGDLVVILPGDRVPADGVVK 428
Query: 370 AGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEA 429
+GRS +DES +GE LPV KE G V+AG+IN +G L +E +G + + I+ +VEEA
Sbjct: 429 SGRSTIDESSFTGEPLPVTKESGSQVAAGSINLNGTLTVEVHRSGGETAVGDIIRLVEEA 488
Query: 430 QGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPXXXX 489
Q REAP+Q+L D +AG F Y VM LSAATF FW G+ + P L NG+P
Sbjct: 489 QSREAPVQQLVDKVAGRFTYGVMALSAATFTFWNLFGAHVLPSAL------HNGSPMSLA 542
Query: 490 XXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGT 549
CPCALGLATPTA+LVGTSLGA++GLL+RGGD+LE+ + +D + DKTGT
Sbjct: 543 LQLSCSVLVVACPCALGLATPTAMLVGTSLGARRGLLLRGGDILEKFSLVDTVVFDKTGT 602
Query: 550 LTEGKPAVFNVA---------SFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNL-T 599
LT+G P V V + + E E+L +AAAVE THP+ KAIV A + N T
Sbjct: 603 LTKGHPVVTEVIIPENPRHNLNDTWSEVEVLMLAAAVESNTTHPVGKAIVKAARARNCQT 662
Query: 600 SPITRGQLAE-PGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSEL 658
G E PG G + V+ + V VGTLEWV +R G+ S + EH + +QS
Sbjct: 663 MKAEDGTFTEEPGSGAVAIVNNKRVTVGTLEWV-KRHGATGN-SLLALEEHEINNQS--- 717
Query: 659 ASPSNYSKSVVYVXXXXXXXXXXXXXSDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVA 718
VVY+ D +R DA V +L ++GI +LSGD+ A
Sbjct: 718 ---------VVYIGVDNTLAAVIRF-EDKVREDAAQVVENLTRQGIDVYMLSGDKRNAAN 767
Query: 719 ATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQI 778
A VGI E + + + P +K I+ LQ + VAMVGDGINDA +LA ++VG+A+
Sbjct: 768 YVASVVGINHERVIAGVKPAEKKNFINELQKNKKIVAMVGDGINDAAALASSNVGVAMGG 827
Query: 779 EAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALL 838
A AAS + ++L+GN+L+Q++DA++L++ TM V QNL WA YN+V IPIAAG LL
Sbjct: 828 GA--GAASEVSPVVLMGNRLTQLLDAMELSRQTMKTVKQNLWWAFGYNIVGIPIAAGVLL 885
Query: 839 PQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESNKKK 879
P +TPS++G LM +SS+ V++NSLLL++ F + K
Sbjct: 886 PLTGTMLTPSMAGALMGVSSLGVMTNSLLLRYRFFSNRNDK 926
|
|
| TIGR_CMR|CHY_0940 CHY_0940 "copper-translocating P-type ATPase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 953 (340.5 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 226/643 (35%), Positives = 349/643 (54%)
Query: 236 SLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWD---ASFFEEPVMLLGFVLLGR 292
S ++G +MN L G A+LI++++ L P + A+FFE +L F++LGR
Sbjct: 220 SYQGLKRGVTDMNLLYATGIGSAYLIAVINTLFPNAGFGGPKATFFESAALLTAFIILGR 279
Query: 293 SLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGD 352
LE R R S + +L+SL +R++I E E+P D++ +GD
Sbjct: 280 YLEALTRGRTSEALRKLISLKPKTARVLINGEEK---------------EIPADEVEIGD 324
Query: 353 SVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACS 412
V+V PGETIPVDG V G + VDESML+GESLPV K EG V G+I G L ++A
Sbjct: 325 LVVVRPGETIPVDGVVERGTASVDESMLTGESLPVDKGEGSMVLGGSIIKTGALTVKATR 384
Query: 413 TGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIF-- 470
G + +S+I+ ++EEAQ +AP+Q+LAD +AG F+ V L+ TF FW++ G Q +
Sbjct: 385 VGKETSLSRIIKLMEEAQTTKAPLQKLADVVAGNFILGVHILALVTFFFWFFYGYQAYFT 444
Query: 471 PDV--LLSDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIR 528
P+ L+S CPCA+GLA P+AI+ GT GA+ G+L +
Sbjct: 445 PETRFLMSPAKIAEMGVFGFSMLISLTVLVISCPCAVGLAMPSAIMAGTGKGAEYGVLFK 504
Query: 529 GGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKA 588
+V+E++ ++ +A DKTGT+T+G+P V ++ F +E ++L++A EK + HP+A+A
Sbjct: 505 NAEVIEKMTKVKVIAFDKTGTITKGEPEVTDLIPFEINEQQLLELAGVAEKLSEHPLAQA 564
Query: 589 IVNKAESLNLTSPITRGQLAE-PGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHL 647
I+ K +N P PG GI+ G + G+ E+F ++ + D
Sbjct: 565 IIKKYREINQKEPSEPATFHNIPGKGIMATYSGVNILAGS-----EKFLQE-NRVD---- 614
Query: 648 EHAVTHQSSELASP-SNYSKSVVYVXXXXXXXXXXXXXSDSLRHDAEHTVRSLQQKGIKT 706
T + E+A K++VY +D+++ + + L++KG
Sbjct: 615 ----TSLAGEIAKKLKGEGKTLVYFAADHRLVGVIAL-ADTVKESSAKAIELLKKKGYIP 669
Query: 707 LLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPS 766
++L+GD E A A++VGI + + + + P+ K E I Q G+ VAM GDGINDAP+
Sbjct: 670 VMLTGDNEVTARAIAQKVGISE--VVAGVLPEGKVEAIKAYQEKGYMVAMAGDGINDAPA 727
Query: 767 LALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYN 826
L ADVGIA+ + A A ++++ L +V+A+D+A+AT KV QN WA YN
Sbjct: 728 LTQADVGIAMGTGT--DIAKEAGEVVIVKGDLVDIVNAMDIARATFGKVKQNFFWAFVYN 785
Query: 827 VVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ 869
+ IP AAG P ++P L+ LMA SS+ V N+LLL+
Sbjct: 786 TLGIPFAAGVFYPWTKALVSPELAALLMAFSSVSVTLNTLLLK 828
|
|
| TIGR_CMR|GSU_2452 GSU_2452 "copper-translocating P-type ATPase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
|---|
Score = 610 (219.8 bits), Expect = 3.9e-102, Sum P(3) = 3.9e-102
Identities = 153/400 (38%), Positives = 216/400 (54%)
Query: 234 RASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDAS-FFEEPVMLLGFVLLGR 292
R S A + S NM+ LV G+ A+ SL + E FFE ML+ F+ LG+
Sbjct: 202 RGSWFALKNRSANMDVLVALGTSAAYFYSLFAFFGAFGEHGGHVFFETSAMLIAFIRLGK 261
Query: 293 SLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGD 352
LE RAR +A + +LL L + ++RLV E EVP +RVGD
Sbjct: 262 YLEARARGKAGEALKKLLRLQADKARLVTGDQER---------------EVPASAVRVGD 306
Query: 353 SVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACS 412
V V PGETIPVDG V+ G S VDESM++GES+P K G V+ T+N G L + A
Sbjct: 307 LVRVRPGETIPVDGEVVEGTSSVDESMVTGESIPADKGPGAAVTGATVNRSGVLLVRATR 366
Query: 413 TGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPD 472
G +++S+IV MV EAQ +APIQR AD ++G FV V+ LSA TFA W++ Q F
Sbjct: 367 IGEETLLSQIVRMVREAQADKAPIQRFADRVSGVFVPVVIALSALTFALWFWGLHQEF-- 424
Query: 473 VLLSDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGGDV 532
+ +A CPCA+GLATPTAI+VG+ +G +G+L++ G V
Sbjct: 425 LFAFKLA--------------ISVVVIACPCAMGLATPTAIMVGSGVGLSRGILVKRGSV 470
Query: 533 LERLARIDYLALDKTGTLTEGKPAVFN-VASFVYDESEILKIAAAVEKTATHPIAKAIVN 591
LE ++R+ + LDKTGTLT G+P++ + V + E +L + AA E + HP+A+A V+
Sbjct: 471 LENISRVQAILLDKTGTLTRGEPSLTDLVPAPGVTEERLLAVLAAAESRSNHPLAQAAVS 530
Query: 592 KAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWV 631
A + G G G+ +DG V G+ ++
Sbjct: 531 GAAGRGVVPAPVDGYRETEGGGVACVLDGEPVTAGSARFL 570
|
|
| WB|WBGene00000834 cua-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 607 (218.7 bits), Expect = 5.5e-97, Sum P(3) = 5.5e-97
Identities = 148/395 (37%), Positives = 222/395 (56%)
Query: 235 ASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPEL-EWDAS---FFEEPVMLLGFVLL 290
AS A + G+ NM+ L+ + +A+ S+V LL + +W +S FF+ P ML+ F+ L
Sbjct: 482 ASWKAIKHGNANMDVLIMLSTTIAYTYSIVVLLLAIIFKWPSSPMTFFDVPPMLIVFIAL 541
Query: 291 GRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRV 350
GR LE +A+ + S +++L+SL + ++ LV SE +++ I +E+ ++
Sbjct: 542 GRMLEHKAKGKTSEALSKLMSLQAKEATLVTMDSEGRLTSEK-----GINIEL----VQR 592
Query: 351 GDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEA 410
D + V+PG +PVDG V+ G+S VDES ++GES+PV K+ G TV G++N G L ++A
Sbjct: 593 NDLIKVVPGAKVPVDGVVVDGKSSVDESFITGESMPVVKKPGSTVIGGSVNQKGVLIVKA 652
Query: 411 CSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIF 470
G++S +S+IV +VEEAQ APIQ+LAD IAG FV V+ LS T W YI
Sbjct: 653 THVGNDSTLSQIVRLVEEAQTNRAPIQQLADKIAGYFVPFVIVLSLFTLGVWIYIEYNSA 712
Query: 471 PDVLLSDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGG 530
+ L CPC+LGLATPTA++VGT +GA G+LI+GG
Sbjct: 713 RNANLPPGLRFE-EALKIAFEAAITVLAIACPCSLGLATPTAVMVGTGVGAANGILIKGG 771
Query: 531 DVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKI----AAAVEKTATHPIA 586
+ LE + ++ + DKTGT+TEG+P V +ASFV + LK+ + A E + HPI
Sbjct: 772 EPLESVHKVTTIVFDKTGTITEGRPRVVQIASFVNPSTMSLKLITFLSGATEALSEHPIG 831
Query: 587 KAIVNKAESL--NLTSPITRGQLAEPGFGILGEVD 619
A+ A+ L T P T G G+ +D
Sbjct: 832 NAVAAFAKQLLNEPTWPNTSRFHVSAGHGVTCRID 866
|
|
| UNIPROTKB|G5EE14 cua-1 "Copper transporting ATPase" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 607 (218.7 bits), Expect = 5.5e-97, Sum P(3) = 5.5e-97
Identities = 148/395 (37%), Positives = 222/395 (56%)
Query: 235 ASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPEL-EWDAS---FFEEPVMLLGFVLL 290
AS A + G+ NM+ L+ + +A+ S+V LL + +W +S FF+ P ML+ F+ L
Sbjct: 482 ASWKAIKHGNANMDVLIMLSTTIAYTYSIVVLLLAIIFKWPSSPMTFFDVPPMLIVFIAL 541
Query: 291 GRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRV 350
GR LE +A+ + S +++L+SL + ++ LV SE +++ I +E+ ++
Sbjct: 542 GRMLEHKAKGKTSEALSKLMSLQAKEATLVTMDSEGRLTSEK-----GINIEL----VQR 592
Query: 351 GDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEA 410
D + V+PG +PVDG V+ G+S VDES ++GES+PV K+ G TV G++N G L ++A
Sbjct: 593 NDLIKVVPGAKVPVDGVVVDGKSSVDESFITGESMPVVKKPGSTVIGGSVNQKGVLIVKA 652
Query: 411 CSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIF 470
G++S +S+IV +VEEAQ APIQ+LAD IAG FV V+ LS T W YI
Sbjct: 653 THVGNDSTLSQIVRLVEEAQTNRAPIQQLADKIAGYFVPFVIVLSLFTLGVWIYIEYNSA 712
Query: 471 PDVLLSDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGG 530
+ L CPC+LGLATPTA++VGT +GA G+LI+GG
Sbjct: 713 RNANLPPGLRFE-EALKIAFEAAITVLAIACPCSLGLATPTAVMVGTGVGAANGILIKGG 771
Query: 531 DVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKI----AAAVEKTATHPIA 586
+ LE + ++ + DKTGT+TEG+P V +ASFV + LK+ + A E + HPI
Sbjct: 772 EPLESVHKVTTIVFDKTGTITEGRPRVVQIASFVNPSTMSLKLITFLSGATEALSEHPIG 831
Query: 587 KAIVNKAESL--NLTSPITRGQLAEPGFGILGEVD 619
A+ A+ L T P T G G+ +D
Sbjct: 832 NAVAAFAKQLLNEPTWPNTSRFHVSAGHGVTCRID 866
|
|
| TAIR|locus:2156354 RAN1 "RESPONSIVE-TO-ANTAGONIST 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 922 (329.6 bits), Expect = 1.1e-95, Sum P(2) = 1.1e-95
Identities = 242/650 (37%), Positives = 354/650 (54%)
Query: 235 ASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELE--WDASFFEEPVMLLGFVLLGR 292
A+ A R GS NM+ LV G+ ++ S+ +LL + W ++F+ ML+ FVLLG+
Sbjct: 358 AAWRALRNGSTNMDVLVALGTSASYFYSVGALLYGAVTGFWSPTYFDASAMLITFVLLGK 417
Query: 293 SLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGD 352
LE A+ + S M +L+ L + +++T + G DA+ ++ P GD
Sbjct: 418 YLESLAKGKTSDAMKKLVQLTPATA-ILLTEGKGGKLVGEREI-DALLIQ-P------GD 468
Query: 353 SVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACS 412
++ V PG IP DG V+ G S V+ESM++GES+PV KE V GTIN G L ++A
Sbjct: 469 TLKVHPGAKIPADGVVVWGSSYVNESMVTGESVPVSKEVDSPVIGGTINMHGALHMKATK 528
Query: 413 TGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQI--F 470
GS++++S+I+S+VE AQ +APIQ+ AD +A FV V+TL+ T W IG + +
Sbjct: 529 VGSDAVLSQIISLVETAQMSKAPIQKFADYVASIFVPVVITLALFTLVGWS-IGGAVGAY 587
Query: 471 PDVLLSDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGG 530
PD L + NG CPCALGLATPTA++V T +GA G+LI+GG
Sbjct: 588 PDEWLPE----NGTHFVFSLMFSISVVVIACPCALGLATPTAVMVATGVGATNGVLIKGG 643
Query: 531 DVLERLARIDYLALDKTGTLTEGKPAVFNVASFV-YDESEILKIAAAVEKTATHPIAKAI 589
D LE+ ++ Y+ DKTGTLT+GK V F D E L + A+ E ++ HP+AKAI
Sbjct: 644 DALEKAHKVKYVIFDKTGTLTQGKATVTTTKVFSEMDRGEFLTLVASAEASSEHPLAKAI 703
Query: 590 VNKAESLNLTSPITR-GQ-----LAEPGFGILGEVD-GRLVAVGTLEWVYERFQKQGDHS 642
V A + T G+ L G+ +L D L G V E+ G+
Sbjct: 704 VAYARHFHFFDESTEDGETNNKDLQNSGW-LLDTSDFSALPGKGIQCLVNEKMILVGNRK 762
Query: 643 DVQHLEHAVT---HQSSELASPSNYSKSVVYVXXXXXXXXXXXXXSDSLRHDAEHTVRSL 699
+ E+A+ H + K+ V V +D L+ +A V L
Sbjct: 763 LMS--ENAINIPDHVEKFVEDLEESGKTGVIVAYNGKLVGVMGI-ADPLKREAALVVEGL 819
Query: 700 QQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGD 759
+ G++ ++++GD A AKEVGI E + + + P K++VI +LQ G VAMVGD
Sbjct: 820 LRMGVRPIMVTGDNWRTARAVAKEVGI--EDVRAEVMPAGKADVIRSLQKDGSTVAMVGD 877
Query: 760 GINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNL 819
GIND+P+LA ADVG+A I A + A AA +L+ N L V+ A+DL++ T+ ++ N
Sbjct: 878 GINDSPALAAADVGMA--IGAGTDVAIEAADYVLMRNNLEDVITAIDLSRKTLTRIRLNY 935
Query: 820 SWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ 869
+A+AYNVV+IPIAAG P + P +G MALSS+ VV +SLLL+
Sbjct: 936 VFAMAYNVVSIPIAAGVFFPVLRVQLPPWAAGACMALSSVSVVCSSLLLR 985
|
|
| UNIPROTKB|G5ED40 cua-1 "Protein CUA-1, isoform b" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
Score = 607 (218.7 bits), Expect = 1.1e-94, Sum P(3) = 1.1e-94
Identities = 148/395 (37%), Positives = 222/395 (56%)
Query: 235 ASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPEL-EWDAS---FFEEPVMLLGFVLL 290
AS A + G+ NM+ L+ + +A+ S+V LL + +W +S FF+ P ML+ F+ L
Sbjct: 360 ASWKAIKHGNANMDVLIMLSTTIAYTYSIVVLLLAIIFKWPSSPMTFFDVPPMLIVFIAL 419
Query: 291 GRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRV 350
GR LE +A+ + S +++L+SL + ++ LV SE +++ I +E+ ++
Sbjct: 420 GRMLEHKAKGKTSEALSKLMSLQAKEATLVTMDSEGRLTSEK-----GINIEL----VQR 470
Query: 351 GDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEA 410
D + V+PG +PVDG V+ G+S VDES ++GES+PV K+ G TV G++N G L ++A
Sbjct: 471 NDLIKVVPGAKVPVDGVVVDGKSSVDESFITGESMPVVKKPGSTVIGGSVNQKGVLIVKA 530
Query: 411 CSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIF 470
G++S +S+IV +VEEAQ APIQ+LAD IAG FV V+ LS T W YI
Sbjct: 531 THVGNDSTLSQIVRLVEEAQTNRAPIQQLADKIAGYFVPFVIVLSLFTLGVWIYIEYNSA 590
Query: 471 PDVLLSDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGG 530
+ L CPC+LGLATPTA++VGT +GA G+LI+GG
Sbjct: 591 RNANLPPGLRFE-EALKIAFEAAITVLAIACPCSLGLATPTAVMVGTGVGAANGILIKGG 649
Query: 531 DVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKI----AAAVEKTATHPIA 586
+ LE + ++ + DKTGT+TEG+P V +ASFV + LK+ + A E + HPI
Sbjct: 650 EPLESVHKVTTIVFDKTGTITEGRPRVVQIASFVNPSTMSLKLITFLSGATEALSEHPIG 709
Query: 587 KAIVNKAESL--NLTSPITRGQLAEPGFGILGEVD 619
A+ A+ L T P T G G+ +D
Sbjct: 710 NAVAAFAKQLLNEPTWPNTSRFHVSAGHGVTCRID 744
|
|
| UNIPROTKB|Q9KPZ7 copA "Copper-exporting P-type ATPase A" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] | Back alignment and assigned GO terms |
|---|
Score = 577 (208.2 bits), Expect = 6.6e-94, Sum P(3) = 6.6e-94
Identities = 142/400 (35%), Positives = 222/400 (55%)
Query: 239 AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDAS---FFEEPVMLLGFVLLGRSLE 295
A G M++LV G+ A+ S++ + P+ DA+ +FE M++G + LG +E
Sbjct: 319 ALTHGRATMDTLVALGTGAAWFYSMLVVAWPQTFPDAARHVYFEATAMIIGLISLGHYIE 378
Query: 296 ERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVL 355
+A+ + + LL+L Q+ LV +E G + + DI++G S+
Sbjct: 379 TKAKSNTNRSLQALLNLQPQQATLV---TEQGDQS------------IAVADIQLGMSLR 423
Query: 356 VLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGS 415
+ PGE +PVDG V G S +DESML+GE +PV KE G V+AGT+N DG L I A G+
Sbjct: 424 IKPGEQVPVDGVVSTGHSYLDESMLTGEPIPVLKEAGAKVAAGTLNQDGSLVITATGIGA 483
Query: 416 NSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLL 475
+M+++I+ MV +AQ + + RLAD I+ FV V+ ++ + A WY G PD
Sbjct: 484 QTMLARIIQMVRQAQSSKPAMARLADQISSVFVPVVVVIAILSAALWYLYG----PDPKA 539
Query: 476 SDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLER 535
S M CPCALGLATP +I VG A+ G+LIR +VL+
Sbjct: 540 SYML-----------VVATTVLIIACPCALGLATPLSITVGIGKAAEMGILIRDANVLQT 588
Query: 536 LARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAES 595
+++D + DKTGTLT GKP++ ++ DE+++L +A A+E+ + HP+AKAI + A+
Sbjct: 589 ASQVDTVVFDKTGTLTLGKPSIQSLHVLQGDENQLLALAYALEQQSEHPLAKAICDYAKQ 648
Query: 596 LNLTSPITRGQLA-EPGFGILGEVDGRLVAVGTLEWVYER 634
N+ SP+ Q + G G+L + + V VG+L ++ E+
Sbjct: 649 RNI-SPVEISQFTNQRGRGLLADYQNQTVLVGSLAFMQEQ 687
|
|
| TIGR_CMR|VC_2215 VC_2215 "cation transport ATPase, E1-E2 family" [Vibrio cholerae O1 biovar El Tor (taxid:686)] | Back alignment and assigned GO terms |
|---|
Score = 577 (208.2 bits), Expect = 6.6e-94, Sum P(3) = 6.6e-94
Identities = 142/400 (35%), Positives = 222/400 (55%)
Query: 239 AFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDAS---FFEEPVMLLGFVLLGRSLE 295
A G M++LV G+ A+ S++ + P+ DA+ +FE M++G + LG +E
Sbjct: 319 ALTHGRATMDTLVALGTGAAWFYSMLVVAWPQTFPDAARHVYFEATAMIIGLISLGHYIE 378
Query: 296 ERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVL 355
+A+ + + LL+L Q+ LV +E G + + DI++G S+
Sbjct: 379 TKAKSNTNRSLQALLNLQPQQATLV---TEQGDQS------------IAVADIQLGMSLR 423
Query: 356 VLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGS 415
+ PGE +PVDG V G S +DESML+GE +PV KE G V+AGT+N DG L I A G+
Sbjct: 424 IKPGEQVPVDGVVSTGHSYLDESMLTGEPIPVLKEAGAKVAAGTLNQDGSLVITATGIGA 483
Query: 416 NSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLL 475
+M+++I+ MV +AQ + + RLAD I+ FV V+ ++ + A WY G PD
Sbjct: 484 QTMLARIIQMVRQAQSSKPAMARLADQISSVFVPVVVVIAILSAALWYLYG----PDPKA 539
Query: 476 SDMAGPNGNPXXXXXXXXXXXXXXXCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLER 535
S M CPCALGLATP +I VG A+ G+LIR +VL+
Sbjct: 540 SYML-----------VVATTVLIIACPCALGLATPLSITVGIGKAAEMGILIRDANVLQT 588
Query: 536 LARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAES 595
+++D + DKTGTLT GKP++ ++ DE+++L +A A+E+ + HP+AKAI + A+
Sbjct: 589 ASQVDTVVFDKTGTLTLGKPSIQSLHVLQGDENQLLALAYALEQQSEHPLAKAICDYAKQ 648
Query: 596 LNLTSPITRGQLA-EPGFGILGEVDGRLVAVGTLEWVYER 634
N+ SP+ Q + G G+L + + V VG+L ++ E+
Sbjct: 649 RNI-SPVEISQFTNQRGRGLLADYQNQTVLVGSLAFMQEQ 687
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| A7X6S1 | COPA_STAA1 | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| Q5HCZ3 | COPA_STAAC | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| B9DFX7 | HMA8_ARATH | 3, ., 6, ., 3, ., 4 | 0.7200 | 0.9807 | 0.9807 | yes | no |
| A8Z3F8 | COPA_STAAT | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| Q99R80 | COPA_STAAM | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| P58342 | ATCU2_RHIME | 3, ., 6, ., 3, ., 4 | 0.3473 | 0.8210 | 0.8766 | yes | no |
| Q7A3E6 | COPA_STAAN | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| Q9X5X3 | ATCU_SINMW | 3, ., 6, ., 3, ., 4 | 0.3329 | 0.8154 | 0.8706 | yes | no |
| O32220 | COPA_BACSU | 3, ., 6, ., 3, ., n, 1 | 0.3454 | 0.8131 | 0.8952 | yes | no |
| Q8NUQ9 | COPA_STAAW | 3, ., 6, ., 3, ., n, 1 | 0.3280 | 0.8018 | 0.8827 | yes | no |
| P07893 | ATSY_SYNP6 | 3, ., 6, ., 3, ., 4 | 0.3821 | 0.8437 | 0.9430 | yes | no |
| A6U4T8 | COPA_STAA2 | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| Q2FV64 | COPA_STAA8 | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| P37385 | ATSY_SYNE7 | 3, ., 6, ., 3, ., 4 | 0.3833 | 0.8437 | 0.9430 | yes | no |
| Q4A0G1 | COPA_STAS1 | 3, ., 6, ., 3, ., n, 1 | 0.3349 | 0.8029 | 0.8929 | yes | no |
| A5IVY3 | COPA_STAA9 | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| Q6G6B7 | COPA_STAAS | 3, ., 6, ., 3, ., n, 1 | 0.3280 | 0.8018 | 0.8827 | yes | no |
| Q2YWA3 | COPA_STAAB | 3, ., 6, ., 3, ., n, 1 | 0.3337 | 0.8074 | 0.8890 | yes | no |
| A6QK47 | COPA_STAAE | 3, ., 6, ., 3, ., n, 1 | 0.3325 | 0.8074 | 0.8890 | yes | no |
| Q6GDP1 | COPA_STAAR | 3, ., 6, ., 3, ., n, 1 | 0.3337 | 0.8074 | 0.8890 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 883 | |||
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 0.0 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-176 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 1e-130 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 1e-121 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-100 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 2e-92 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 3e-59 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-52 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 3e-41 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 1e-39 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-38 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 8e-35 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 4e-31 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-23 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-15 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 5e-14 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 9e-14 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 2e-13 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 7e-13 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-12 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 5e-12 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 8e-12 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 2e-09 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 3e-09 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-08 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 1e-08 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 5e-08 | |
| cd00371 | 63 | cd00371, HMA, Heavy-metal-associated domain (HMA) | 8e-07 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 4e-06 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 4e-06 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 8e-06 | |
| pfam00403 | 62 | pfam00403, HMA, Heavy-metal-associated domain | 1e-05 | |
| COG2608 | 71 | COG2608, CopZ, Copper chaperone [Inorganic ion tra | 3e-05 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 9e-05 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-04 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 5e-04 | |
| TIGR01491 | 201 | TIGR01491, HAD-SF-IB-PSPlk, HAD-superfamily, subfa | 6e-04 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.003 | |
| COG1778 | 170 | COG1778, COG1778, Low specificity phosphatase (HAD | 0.004 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 652 bits (1684), Expect = 0.0
Identities = 300/800 (37%), Positives = 427/800 (53%), Gaps = 99/800 (12%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
L V GM C C +R++++ V+ VN+ TE A + E V+ ++V V
Sbjct: 3 ETSLSVEGMTCAACASRIEALNKLPG-VEEARVNLATERATVVYDPEEVDLPADIVAAVE 61
Query: 133 ESLGKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCG 192
++ G+ A+ + + A+ LL + R+ +A L
Sbjct: 62 KA--------GYSARLTAA----------LADPAEAEARLLRELLRRLIIAGLLTLP--- 100
Query: 193 SHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGALFGPG----RASLMAFRKGSPNMN 248
L + + LL +V A LF G R + A R+G NM+
Sbjct: 101 --------LLLLSLGLLLGAFLLP--WVSFLLATPVLFYGGWPFYRGAWRALRRGRLNMD 150
Query: 249 SLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNE 308
+LV +I A+ SL + L P +FEE ML+ LLGR LE RA+ RA +
Sbjct: 151 TLVALATIGAYAYSLYATLFP------VYFEEAAMLIFLFLLGRYLEARAKGRARRAIRA 204
Query: 309 LLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRV 368
LL L + +V E EVP ++++VGD VLV PGE IPVDG V
Sbjct: 205 LLDLAPKTATVVRGDGEE--------------EEVPVEEVQVGDIVLVRPGERIPVDGVV 250
Query: 369 LAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEE 428
++G S VDESML+GESLPV K+ G V AGT+N DG L I G+++ +++I+ +VEE
Sbjct: 251 VSGSSSVDESMLTGESLPVEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEE 310
Query: 429 AQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLL 488
AQ +APIQRLAD +A FV V+ ++A TFA W G G
Sbjct: 311 AQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG----------------GGDWET 354
Query: 489 SLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTG 548
+L ++ VLV++CPCALGLATPTAILVG A++G+LI+GG+ LERLA++D + DKTG
Sbjct: 355 ALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTG 414
Query: 549 TLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLA 608
TLTEGKP V +V + DE E+L +AAA+E+ + HP+AKAIV A L
Sbjct: 415 TLTEGKPEVTDVVALDGDEDELLALAAALEQHSEHPLAKAIVKAAAERGLPDV--EDFEE 472
Query: 609 EPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSV 668
PG G+ EVDG V VG + + S + + + K+V
Sbjct: 473 IPGRGVEAEVDGERVLVGNARL-------------LGEEGIDLPLLSERIEALESEGKTV 519
Query: 669 VYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK 728
V+V +G+ ++G IA++D LR DA+ + +L+ GIK ++L+GD A AKE+GI
Sbjct: 520 VFVAVDGK-LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI-D 577
Query: 729 EYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTA 788
E + L P+ K+E++ LQ G VAMVGDGINDAP+LA ADVGIA + + + A A
Sbjct: 578 EVR-AELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIA--MGSGTDVAIEA 634
Query: 789 ASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPS 848
A ++L+ + LS V +A+DL++AT + QNL WA YN +AIP+AAG LL TP
Sbjct: 635 ADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGLL-------TPW 687
Query: 849 LSGGLMALSSIFVVSNSLLL 868
++ M+ SS+ VV N+L L
Sbjct: 688 IAALAMSGSSVLVVLNALRL 707
|
Length = 713 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 554 bits (1430), Expect = 0.0
Identities = 246/610 (40%), Positives = 358/610 (58%), Gaps = 58/610 (9%)
Query: 234 RASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPEL---EWDASFFEEPVMLLGFVLL 290
+++ A R +PNM++L+ G+ VA+ SLV+LL ++ +FF+ ML+ F+LL
Sbjct: 7 KSAWKALRHKTPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILL 66
Query: 291 GRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRV 350
GR LE A+ RAS +++L L + + L+ E EVP + ++
Sbjct: 67 GRWLEMLAKGRASDALSKLAKLQPSTATLLTDDGEI--------------EEVPVELLQP 112
Query: 351 GDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEA 410
GD V VLPGE IPVDG V+ G S VDES+++GESLPV K+ G V AGT+N G L + A
Sbjct: 113 GDIVRVLPGEKIPVDGTVIEGESEVDESLVTGESLPVPKKVGDPVIAGTVNGTGSLVVRA 172
Query: 411 CSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIF 470
+TG ++ +++IV +V +AQ +APIQRLAD +AG FV V+ ++ TF W +G+
Sbjct: 173 TATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLILGADFV 232
Query: 471 PDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGG 530
+L+++V VL+++CPCALGLATPT I V T L AK G+LI+ G
Sbjct: 233 -----------------FALEVAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDG 275
Query: 531 DVLERLARIDYLALDKTGTLTEGKPAVFNVASFV-YDESEILKIAAAVEKTATHPIAKAI 589
D LER A ID + DKTGTLT+GKP V +V F D E+L +AAA+E + HP+AKAI
Sbjct: 276 DALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGESDRDELLALAAALEAGSEHPLAKAI 335
Query: 590 VNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEH 649
V+ A++ +T A PG G+ G V+G + +G + + E
Sbjct: 336 VSYAKAKGITLSQVSDFKAIPGIGVEGTVEGHTIQLGNEKLLGE--------------NG 381
Query: 650 AVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLL 709
T E + + V V GE + G +A++D L+ +A+ +++L+++GI+ ++L
Sbjct: 382 LKTDGEVEEGGGT----TSVLVAVNGE-LAGVLALADQLKPEAKEVIQALKRRGIEPVML 436
Query: 710 SGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLAL 769
+GD + A AKE+GI + + P K+ +I LQ G VAMVGDGINDAP+LA
Sbjct: 437 TGDNRKTAKAVAKELGIENVR--AEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPALAQ 494
Query: 770 ADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVA 829
ADVGIA I A + A AA ++LL N L+ V A+DL++ T+ ++ QNL WA YNV+A
Sbjct: 495 ADVGIA--IGAGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIA 552
Query: 830 IPIAAGALLP 839
IPIAAG L P
Sbjct: 553 IPIAAGVLYP 562
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 521 bits (1344), Expect = e-176
Identities = 251/629 (39%), Positives = 359/629 (57%), Gaps = 80/629 (12%)
Query: 247 MNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDM 306
M+ L+ +I A+ + LV E +LL LLG +LEERA+ RAS +
Sbjct: 1 MDLLMALATIAAYAMGLVL--------------EGALLLFLFLLGETLEERAKGRASDAL 46
Query: 307 NELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDG 366
+ LL+L + +R++ D EVP ++++VGD V+V PGE IPVDG
Sbjct: 47 SALLALAPSTARVLQG--------------DGSEEEVPVEELQVGDIVIVRPGERIPVDG 92
Query: 367 RVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMV 426
V++G S VDES L+GES+PV K+EG V AGTIN DG L I G +S +++IV +V
Sbjct: 93 VVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELV 152
Query: 427 EEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPL 486
EEAQ +APIQRLAD IA +V +V+ ++ TF W +G+
Sbjct: 153 EEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGA------------------- 193
Query: 487 LLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDK 546
L +L ++ VLVV+CPCALGLATP AILV + A++G+LI+GGD LE+LA++ + DK
Sbjct: 194 LGALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDK 253
Query: 547 TGTLTEGKPAVFNVASF---VYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPIT 603
TGTLT GKP V ++ E E+L +AAA+E++++HP+A+AIV A+ L P
Sbjct: 254 TGTLTTGKPTVVDIEPLDDASISEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPKQ 313
Query: 604 RGQLAEPGFGILGEVDG-RLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPS 662
PG G+ VDG V +G ++ +S
Sbjct: 314 EDVEEVPGKGVEATVDGGEEVRIGNPRFL---------------ELAIEPISASPDLLNE 358
Query: 663 NYS--KSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKG-IKTLLLSGDREEAVAA 719
S K+VV+V +GE ++G IA+ D LR +A+ + +L++ G IK ++L+GD A A
Sbjct: 359 GESQGKTVVFVAVDGE-LLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEA 417
Query: 720 TAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIE 779
A E+GI + +++ L P+ K ++ LQ G VAMVGDGINDAP+LA ADVGIA +
Sbjct: 418 VAAELGI--DEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIA--MG 473
Query: 780 AQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLP 839
A + A AA I+LL + LS + A+DL++ T + QNL+WA+ YN+VAIP+AAG LLP
Sbjct: 474 AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGLLP 533
Query: 840 QYDFAMTPSLSGGLMALSSIFVVSNSLLL 868
L+ L S++ VV NSL L
Sbjct: 534 ------LWLLAVLLHEGSTVLVVLNSLRL 556
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 400 bits (1030), Expect = e-130
Identities = 199/561 (35%), Positives = 295/561 (52%), Gaps = 69/561 (12%)
Query: 280 EPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAI 339
E +LL +G +LEE A RA + L+ L +R++ S
Sbjct: 20 EGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSL-------------- 65
Query: 340 CVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGT 399
EV ++++VGD V+V PGE +PVDG VL+G S VDES L+GES+PV K G V AG
Sbjct: 66 -EEVAVEELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGA 124
Query: 400 INWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATF 459
IN DG L I ++S I+KIV++VEEAQ R+A QR D A + V+ ++
Sbjct: 125 INLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIAL--- 181
Query: 460 AFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSL 519
A W + P +L + ++ +LVV+ PCAL ++ P A L S
Sbjct: 182 AIW------LVPGLLK---------RWPFWVYRALVLLVVASPCALVISAPAAYLSAISA 226
Query: 520 GAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEK 579
A+ G+LI+GG LE LA+I +A DKTGTLT G+P V +V E+L++AAA E+
Sbjct: 227 AARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA-----EVLRLAAAAEQ 281
Query: 580 TATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQG 639
++HP+A+AIV+ A + PG G+ VDG V +G R
Sbjct: 282 ASSHPLARAIVDYARKRENVESVE----EVPGEGVRAVVDGGEVRIGN-----PRS---- 328
Query: 640 DHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSL 699
+++ A P + K++V+V R+G +G I +SD R DA + L
Sbjct: 329 -------------LEAAVGARPESAGKTIVHVARDGT-YLGYILLSDEPRPDAAEAIAEL 374
Query: 700 QQKGI-KTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVG 758
+ GI K ++L+GDR A+E+GI + +++ L P+ K E++ L+ VAMVG
Sbjct: 375 KALGIEKVVMLTGDRRAVAERVARELGI--DEVHAELLPEDKLEIVKELREKYGPVAMVG 432
Query: 759 DGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQN 818
DGINDAP+LA ADVGIA+ + A A ++LL + LS++ A+ LA+ T V QN
Sbjct: 433 DGINDAPALAAADVGIAMGASGSD-VAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQN 491
Query: 819 LSWAVAYNVVAIPIAAGALLP 839
+ A+ ++ I +A +LP
Sbjct: 492 VVIALGIILLLILLALFGVLP 512
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 386 bits (994), Expect = e-121
Identities = 280/844 (33%), Positives = 431/844 (51%), Gaps = 114/844 (13%)
Query: 53 ETRTQPQN---APFELP--KRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNM 107
E+ + A ELP D + L +SGM C CV+RV++ L + V VN
Sbjct: 75 ESSIPSEALTAASEELPAATADDDDSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVN- 133
Query: 108 LTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAE-NVKKWKELA 166
L E A+ + + + ++ + V G +E +AKRR A+ +K+++ A
Sbjct: 134 LAERTALVMGSASPQDLVQAVEKAG--YGAEAIED--DAKRRERQQETAQATMKRFRWQA 189
Query: 167 KKREDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSY------- 219
VALA +GI + +W ++ ++
Sbjct: 190 I------------VALA------------------VGIPVM---VWGMIGDNMMVTADNR 216
Query: 220 ----VKGGFALGALFGPG----RASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPEL 271
V G L + G R++ + GS M++LV G+ A+L S+ L P+
Sbjct: 217 SLWLVIGLITLAVMVFAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQW 276
Query: 272 ---EWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGS 328
E ++E M++G + LG LE RAR R+S + +LL L +R+V E
Sbjct: 277 FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGE--- 333
Query: 329 SADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVF 388
VP D++ G + + G+ +PVDG + G + +DE+ML+GE +P
Sbjct: 334 ------------KSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQ 381
Query: 389 KEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFV 448
K EG +V AGT+ DG + A + GS++ +S+I+ MV +AQ + I +LAD I+ FV
Sbjct: 382 KGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFV 441
Query: 449 YSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLA 508
V+ ++ + A WY+ G P ++ +L ++ VL+++CPCALGLA
Sbjct: 442 PVVVVIALVSAAIWYFFGPA------------PQ---IVYTLVIATTVLIIACPCALGLA 486
Query: 509 TPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV-YDE 567
TP +I+ G A+ G+L+R D L+R + +D L DKTGTLTEGKP V V +F DE
Sbjct: 487 TPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVDE 546
Query: 568 SEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGT 627
++ L++AAA+E+ ++HP+A+AI++KA + L L G G+ GE +G + +G
Sbjct: 547 AQALRLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLR--GLGVSGEAEGHALLLGN 604
Query: 628 LEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDS 687
+ E+ D + LE +T Q+S+ A+P V + +G+ +AI D
Sbjct: 605 QALLNEQ------QVDTKALEAEITAQASQGATP-------VLLAVDGK-AAALLAIRDP 650
Query: 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTL 747
LR D+ ++ L + G + ++L+GD A AKE GI E I L P K+E I L
Sbjct: 651 LRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI-DEVIAGVL-PDGKAEAIKRL 708
Query: 748 QTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDL 807
Q+ G VAMVGDGINDAP+LA ADVGIA+ + A A+I L+ + L V DAL +
Sbjct: 709 QSQGRQVAMVGDGINDAPALAQADVGIAMG--GGSDVAIETAAITLMRHSLMGVADALAI 766
Query: 808 AKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNS-L 866
++AT+ + QNL A YN + IPIAAG L P + P ++G MALSSI VVSN+
Sbjct: 767 SRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVVSNANR 826
Query: 867 LLQF 870
LL+F
Sbjct: 827 LLRF 830
|
Length = 834 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 321 bits (825), Expect = e-100
Identities = 167/587 (28%), Positives = 270/587 (45%), Gaps = 64/587 (10%)
Query: 283 MLLGFVLLGRSLEERARIRASSDMNEL-LSLVSTQSRLVITSSESGSSADNVLCSDAICV 341
+L VL+ L + +++A + L LV+T+ V+ +
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGW---------------K 45
Query: 342 EVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFT------- 394
E+P D+ GD VLV GET+P DG +L+G VDES L+GES PV K
Sbjct: 46 EIPAKDLVPGDVVLVKSGETVPADGVLLSGSCFVDESNLTGESNPVLKTALKETQSGTIT 105
Query: 395 ---VSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGP-FVYS 450
V AGT + G L + TG + + +I +V+ P+Q D + F+
Sbjct: 106 GDLVFAGTYVFGGTLIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILF 165
Query: 451 VMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATP 510
++ L+ A F + + G + N + +L ++ VLV+ P AL A
Sbjct: 166 LLLLALAVFLYLFIRGW--------------DPNSIFKALLRALIVLVIVVPPALPAAVT 211
Query: 511 TAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASF-VYDESE 569
A+ VG + AK+G+L+R + LE L ++DYL DKTGTLT+ K + V +++
Sbjct: 212 VALAVGDARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNS 271
Query: 570 ILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILG--EVDGRLVAVGT 627
+A + P+ KA++ AE + + IL L +
Sbjct: 272 SSLVACDNNYLSGDPMEKALLKSAELVGKADKGN------KEYKILDVFPFSSVLKRMSV 325
Query: 628 L-EWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEG---IIGAIA 683
+ E + LE ++ L + + + +E E +G I
Sbjct: 326 IVETPDGSDLLFVKGAPEFILERCNNYEEKYLELARQGLRVLAFASKELEDDLEFLGLIT 385
Query: 684 ISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEV 743
D LR DA+ T+ L+ GIK ++++GD A AKE+GI + + ++P+QK ++
Sbjct: 386 FEDPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGID---VFARVSPEQKLQI 442
Query: 744 ISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVD 803
+ LQ GH VAM GDG+NDAP+L ADVGIA+ A AA I+LL + LS +V
Sbjct: 443 VEALQKKGHIVAMTGDGVNDAPALKKADVGIAM-------GAKAAADIVLLDDDLSAIVK 495
Query: 804 ALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLS 850
A+ + + + N+ WA+AYN++ IP+A ++ M +L+
Sbjct: 496 AVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLLPMLAALA 542
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 307 bits (788), Expect = 2e-92
Identities = 229/759 (30%), Positives = 348/759 (45%), Gaps = 134/759 (17%)
Query: 78 VSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGK 137
VSGM C C +V++ + V+ V V TE KL +A + V + + G
Sbjct: 59 VSGMDCPSCARKVENAVRQLAGVNQVQVLFATE----KLVVDADNDIRAQVESAVQKAGF 114
Query: 138 RLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGSHASH 197
L R A + E N + ++
Sbjct: 115 SL--------RDEQAAAAAPESRLKSE-------------NLPLITLAVMMAI------- 146
Query: 198 ILHSLGIHIAHGPLWELLDNSYVKGGFALGALFG--P-GRASLMAFRKGSP-NMNSLVGF 253
S G+ + P +L F L G P R +L R GSP + +L+
Sbjct: 147 ---SWGLEQFNHPFGQLA--------FIATTLVGLYPIARKALRLIRSGSPFAIETLMSV 195
Query: 254 GSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLV 313
+I A I A+ E M+L L+G LE A RA ++ L++LV
Sbjct: 196 AAIGALFI------------GAT--AEAAMVLLLFLIGERLEGYAASRARRGVSALMALV 241
Query: 314 STQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRS 373
+ + D EV D+R GD + V G +P DG++L+ +
Sbjct: 242 PETATRLR---------------DGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFA 286
Query: 374 VVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGRE 433
DES L+GES+PV + G V AG + D + +E S S I +I+ ++EEA+ R
Sbjct: 287 SFDESALTGESIPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERR 346
Query: 434 APIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGP------NGNPLL 487
API+R D + + ++M ++ + P +L A P G LL
Sbjct: 347 APIERFIDRFSRIYTPAIMLVALLVI---------LVPPLL---FAAPWQEWIYRGLTLL 394
Query: 488 LSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKT 547
L + CPCAL ++TP AI G + A++G LI+GG LE+L R+ +A DKT
Sbjct: 395 L----------IGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKT 444
Query: 548 GTLTEGKPAVFNVASFVY-DESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQ 606
GTLTEGKP V ++ ESE+L +AAAVE+ +THP+A+AIV +A+ L P Q
Sbjct: 445 GTLTEGKPQVTDIHPATGISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQ 504
Query: 607 LAEPGFGILGEVDGRLVAV---GTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSN 663
A G GI G+V+G V + G L + + F Q + LE +
Sbjct: 505 RALAGSGIEGQVNGERVLICAPGKLPPLADAFAGQ-----INELE--------------S 545
Query: 664 YSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKE 723
K+VV V R + ++G IA+ D+LR DA + L+ GIK ++L+GD A AA A E
Sbjct: 546 AGKTVVLVLRNDD-VLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGE 604
Query: 724 VGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQEN 783
+GI ++ + L P+ K + ++ L +AMVGDGINDAP++ A +GIA+ + +
Sbjct: 605 LGI--DF-RAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMG--SGTD 658
Query: 784 AASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWA 822
A A L N+L + ++L++AT A + QN++ A
Sbjct: 659 VALETADAALTHNRLRGLAQMIELSRATHANIRQNITIA 697
|
Length = 741 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 200 bits (512), Expect = 3e-59
Identities = 88/253 (34%), Positives = 128/253 (50%), Gaps = 31/253 (12%)
Query: 283 MLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVE 342
++L VL+ LE RA + L L+ + VI D E
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVI--------------RDGKEEE 46
Query: 343 VPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINW 402
+P D++ VGD VL+ PG+ +P DGR++ G VDES L+GESLPV K G TV AGT+
Sbjct: 47 IPADELVVGDIVLLKPGDRVPADGRIIEGSLEVDESALTGESLPVEKSRGDTVFAGTVVL 106
Query: 403 DGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFW 462
G L++ +TG ++ + KI +VEEA+ + P+QRL D +A V V+ L+ F W
Sbjct: 107 SGELKVIVTATGEDTELGKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLIW 166
Query: 463 YYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAK 522
++ G L +L ++ VLV +CP AL LA P A+ VG AK
Sbjct: 167 FFR-----------------GGDFLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAK 209
Query: 523 QGLLIRGGDVLER 535
+G+L++ LE
Sbjct: 210 KGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 1e-52
Identities = 162/670 (24%), Positives = 258/670 (38%), Gaps = 158/670 (23%)
Query: 283 MLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVE 342
+++ LLG E RA + L + S +++ V+ + VE
Sbjct: 112 VVVINALLGFVQE----YRAEKALEALKKMSSPKAK-VLRDGKF--------------VE 152
Query: 343 VPTDDIRVGDSVLVLPGETIPVDGRVLAGR-SVVDESMLSGESLPVFKEEGFTVSAGTIN 401
+P ++ GD VL+ G+ +P D R+L VDES L+GESLPV K+ +
Sbjct: 153 IPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKS---- 208
Query: 402 WDGPLRIEACS-------------------TGSNSMISKIVSMVEEAQGREAPIQRLADA 442
D PL ++ + TG + KI ++ + + P+QR +
Sbjct: 209 -DAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTPLQRKLNK 267
Query: 443 IAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCP 502
+ + + L A F + G GN LL S ++ + V + P
Sbjct: 268 LGKFLLVLALVLGALVFVVGLFRG----------------GNGLLESFLTALALAVAAVP 311
Query: 503 CALGLATPTAILVGTSLGA----KQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAV- 557
L P + + +LGA K ++R + +E L +D + DKTGTLT+ K V
Sbjct: 312 EGL----PAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVK 367
Query: 558 -----------FNVASFVYDESEILKIAAAV----------EKTATHPIAKAIVNKAESL 596
+ +AAA+ A P A+V AE L
Sbjct: 368 KIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTPEKNGWYQAGDPTEGALVEFAEKL 427
Query: 597 NLTSPITRGQLAEPGFGILGEV-----------------DGRLVAV-GTLEWVYERFQKQ 638
+ ++ E + IL E+ ++ V G E + ER +
Sbjct: 428 GFSLDLSG---LEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI 484
Query: 639 GD-----HSDVQHLEHAVTHQSSE------LASPSNYSKSVVYVGREGEG---IIGAIAI 684
G+ ++ LE AV +SE +A E E +G I
Sbjct: 485 GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGI 544
Query: 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS---------- 734
D R D + + L++ GIK +++GD E A AKE GI E ++
Sbjct: 545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDAL 604
Query: 735 -----------------LTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQ 777
++P+QK+ ++ LQ SGH VAM GDG+NDAP+L ADVGIA+
Sbjct: 605 SDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMG 664
Query: 778 IEAQENAASTAASIILLGNKLSQVVDALDLAK---ATMAKVYQN-LSWAVAYNVVAIPIA 833
E + AA AA I+LL + + +V A+ + + K LS V + + I
Sbjct: 665 GEGTD-AAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLL-IY 722
Query: 834 AGALLPQYDF 843
+ L
Sbjct: 723 SLFNLFFLPL 732
|
Length = 917 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 161 bits (408), Expect = 3e-41
Identities = 146/533 (27%), Positives = 234/533 (43%), Gaps = 69/533 (12%)
Query: 334 LCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEG- 392
L D +VP D ++ GD VLV G+ IP DG V+ G + VDES ++GES PV KE G
Sbjct: 110 LRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVASVDESAITGESAPVIKESGG 169
Query: 393 --FTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYS 450
+V+ GT L +E + + + +++++VE AQ R+ P + IA +
Sbjct: 170 DFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTP-----NEIALTILLI 224
Query: 451 VMTL-----SAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCAL 505
+TL +A + F Y G+ I VL V +LV P +
Sbjct: 225 ALTLVFLLVTATLWPFAAYGGNAISVTVL-------------------VALLVCLIPTTI 265
Query: 506 GLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV- 564
G + G ++ G +E +D L LDKTGT+T G + F+
Sbjct: 266 GGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRL---ASEFIP 322
Query: 565 ---YDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAE----------PG 611
DE + A P K+IV A+ L + + A G
Sbjct: 323 AQGVDEKTLADAAQLASLADDTPEGKSIVILAKQLGIREDDVQSLHATFVEFTAQTRMSG 382
Query: 612 FGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYV 671
+ GR++ G ++ + + G H L+ AV + + +P VV
Sbjct: 383 INLDN---GRMIRKGAVDAIKRHVEANGGHIPTD-LDQAVDQVARQGGTP-----LVVCE 433
Query: 672 GREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYI 731
I G I + D ++ + L++ GIKT++++GD AA A E G+ ++I
Sbjct: 434 DNR---IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV-DDFI 489
Query: 732 NSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASI 791
+ TP+ K +I Q G VAM GDG NDAP+LA ADVG+A+ Q AA AA++
Sbjct: 490 -AEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQ--AAKEAANM 546
Query: 792 ILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVA----IPIAAGALLPQ 840
+ L + +++++ + + K + ++++A +V IP A PQ
Sbjct: 547 VDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQ 599
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 1e-39
Identities = 164/607 (27%), Positives = 263/607 (43%), Gaps = 98/607 (16%)
Query: 234 RASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEP----------VM 283
+A AF+K +P V + V F++ + S+L L F +
Sbjct: 15 QALKDAFKKLNPR----VLVKNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITI 70
Query: 284 LLGFVLLGRSLEE---RARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAIC 340
+L F +L + E R +A +D SL T++ + A +L +D
Sbjct: 71 ILWFTVLFANFAEAVAEGRGKAQAD-----SLRKTKT---------ETIA-RLLRADGSI 115
Query: 341 VEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGF---TVSA 397
VP +++ GD VLV GE IP DG V+ G + VDES ++GES PV +E G +V+
Sbjct: 116 EMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAITGESAPVIRESGGDFSSVTG 175
Query: 398 GTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTL--- 454
GT L+I + + + +++++VE A+ ++ P + IA + S +TL
Sbjct: 176 GTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTP-----NEIALTILLSGLTLIFL 230
Query: 455 --SAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTA 512
A + F Y G +L V +LV P +G +A
Sbjct: 231 LAVATLYPFAIYSGGGAASVTVL------------------VALLVCLIPTTIG-GLLSA 271
Query: 513 I-LVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVY-----D 566
I + G + ++ G +E +D L LDKTGT+T G AS
Sbjct: 272 IGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGN----RQASEFIPVPGVS 327
Query: 567 ESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQL--------AEPGFGILGEV 618
E E+ A P ++IV A+ L + Q A+ +
Sbjct: 328 EEELADAAQLASLADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLP 387
Query: 619 DGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGI 678
GR + G ++ + +++G H + L+ AV S +P + V G I
Sbjct: 388 GGREIRKGAVDAIRRYVRERGGHIP-EDLDAAVDEVSRLGGTP-------LVVVENGR-I 438
Query: 679 IGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQ 738
+G I + D ++ + L++ GIKT++++GD AA A E G+ ++I + TP+
Sbjct: 439 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-DDFIAEA-TPE 496
Query: 739 QKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGN-- 796
K +I Q G VAM GDG NDAP+LA ADVG+A+ Q AA AA+++ L +
Sbjct: 497 DKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQ--AAKEAANMVDLDSNP 554
Query: 797 -KLSQVV 802
KL +VV
Sbjct: 555 TKLIEVV 561
|
Length = 681 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 154 bits (390), Expect = 1e-38
Identities = 134/548 (24%), Positives = 226/548 (41%), Gaps = 65/548 (11%)
Query: 341 VEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV-VDESMLSGESLPVFKEEGFTVSAGT 399
E+P ++ GD V + G+ +P D R+ G + VD++ L+GESLPV K+ G +G+
Sbjct: 103 QEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGS 162
Query: 400 INWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATF 459
G +TG N+ K ++V+ + +Q++ I + + L
Sbjct: 163 TVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIEL 222
Query: 460 AFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSL 519
++ G L+ ++ +LV P A+ + VG +
Sbjct: 223 VVLFFG----------------RGESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAE 266
Query: 520 GAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVY--DESEILKIAAAV 577
AK+ ++ +E LA +D L DKTGTLT K ++ + F D+ ++L AA
Sbjct: 267 LAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALA 326
Query: 578 EKTA-THPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERF- 635
+ I A++ A+ L R F VD R A +RF
Sbjct: 327 SREEDQDAIDTAVLGSAKDL----KEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFK 382
Query: 636 ------QKQGDHSDVQH-LEHAVTHQSSELASPSNYSKSVVYVGREGE-GIIGAIAISDS 687
Q D D + +E V + ELAS + V EG +G + + D
Sbjct: 383 VTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTDEEGRWHFLGLLPLFDP 442
Query: 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS------------- 734
RHD + T+ + G++ +++GD TA+ +G+G +
Sbjct: 443 PRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPS 502
Query: 735 --------------LTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEA 780
+ P+ K E++ LQ GH V M GDG+NDAP+L ADVGIA +
Sbjct: 503 GLGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIA--VAG 560
Query: 781 QENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNV-VAIPIAAGALLP 839
+AA +AA I+L LS +VDA+ ++ ++ + + +A + + L+
Sbjct: 561 ATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILI- 619
Query: 840 QYDFAMTP 847
+F P
Sbjct: 620 -LNFYFPP 626
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 141 bits (358), Expect = 8e-35
Identities = 144/522 (27%), Positives = 222/522 (42%), Gaps = 120/522 (22%)
Query: 332 NVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEE 391
L EVP ++R GD VLV GE IP DG V+ G + VDES ++GES PV +E
Sbjct: 107 RKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASVDESAITGESAPVIRES 166
Query: 392 GFTVSA---GTI---NWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAG 445
G S+ GT +W + I + S + +++++VE A+ ++ P + IA
Sbjct: 167 GGDFSSVTGGTRVLSDW---IVIRITANPGESFLDRMIALVEGAKRQKTP-----NEIAL 218
Query: 446 PFVYSVMTL-----SAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVS 500
+ + +T+ A F Y G + VL++ LL+ L
Sbjct: 219 TILLAGLTIIFLLVVATLPPFAAYSGGALSITVLVA---------LLVCL---------- 259
Query: 501 CPCALGLATPTAILVGTSLGAKQGLL----IRGGDVLERLAR----------------ID 540
PT I G GLL I G D R+ + +D
Sbjct: 260 --------IPTTI------G---GLLSAIGIAGMD---RVLQANVIATSGRAVEAAGDVD 299
Query: 541 YLALDKTGTLTEG--KPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNL 598
L LDKTGT+T G + + F V E E+ A P ++IV A+
Sbjct: 300 TLLLDKTGTITLGNRQASEFLPVPGV-TEEELADAAQLSSLADETPEGRSIVVLAKQ--- 355
Query: 599 TSPITRGQLAEPGFGILG---------------EVDGRLVAVGTLEWVYERFQKQGDHSD 643
R L E L ++DGR + G ++ + + G H
Sbjct: 356 -----RFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGHFP 410
Query: 644 VQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKG 703
+ L+ AV + + +P VV ++G I + D ++ + L++ G
Sbjct: 411 AE-LDAAVDEVARKGGTPL-----VVAEDNR---VLGVIYLKDIVKPGIKERFAELRKMG 461
Query: 704 IKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGIND 763
IKT++++GD AA A E G+ +++ + TP+ K +I Q G VAM GDG ND
Sbjct: 462 IKTVMITGDNPLTAAAIAAEAGV-DDFLAEA-TPEDKLALIRQEQAEGRLVAMTGDGTND 519
Query: 764 APSLALADVGIALQIEAQENAASTAASIILLGN---KLSQVV 802
AP+LA ADVG+A+ Q AA A +++ L + KL +VV
Sbjct: 520 APALAQADVGVAMNSGTQ--AAKEAGNMVDLDSNPTKLIEVV 559
|
Length = 679 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 130 bits (327), Expect = 4e-31
Identities = 138/518 (26%), Positives = 232/518 (44%), Gaps = 49/518 (9%)
Query: 343 VPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEG---FTVSAGT 399
+ D++ G V V GE IP DG+V+ G + VDES ++GES PV KE G V GT
Sbjct: 118 IDASDLKKGHIVRVATGEQIPNDGKVIKGLATVDESAITGESAPVIKESGGDFDNVIGGT 177
Query: 400 INWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATF 459
L +E S +S + K++ +VE A ++ P + IA +MTL+
Sbjct: 178 SVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTP-----NEIA--LFTLLMTLTI--- 227
Query: 460 AFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSL 519
IF V+L+ LS+ + + + V P +G + G
Sbjct: 228 ---------IFLVVILTMYPLAKFLNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDR 278
Query: 520 GAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGK---PAVFNVASFVYDESEILKIAAA 576
+ +L + G +E ++ L LDKTGT+T G A V S ++ ++
Sbjct: 279 VTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESS 338
Query: 577 VEKTATHPIAKAIVNKAESLNLTSPITRGQL----AEPGFGILGEVDGRLVAVGTLEWVY 632
+ P ++IV A ++ P G+ AE + + R V G +
Sbjct: 339 IADDT--PEGRSIVKLAYKQHIDLPQEVGEYIPFTAETRMSGV-KFTTREVYKGAPNSMV 395
Query: 633 ERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDA 692
+R ++ G H L+ V S + +P V E I+G I + D ++
Sbjct: 396 KRVKEAGGHIP-VDLDALVKGVSKKGGTP--------LVVLEDNEILGVIYLKDVIKDGL 446
Query: 693 EHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGH 752
R L++ GI+T++ +GD E A AKE G+ + + P+ K VI Q GH
Sbjct: 447 VERFRELREMGIETVMCTGDNELTAATIAKEAGVDR--FVAECKPEDKINVIREEQAKGH 504
Query: 753 HVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATM 812
VAM GDG NDAP+LA A+VG+A+ + +A AA++I L + +++++ + + K +
Sbjct: 505 IVAMTGDGTNDAPALAEANVGLAMN--SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLL 562
Query: 813 AKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLS 850
++++A ++ A+LP A P+++
Sbjct: 563 MTRGSLTTFSIANDIAKY----FAILPAMFMAAMPAMN 596
|
Length = 673 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 4e-23
Identities = 138/572 (24%), Positives = 229/572 (40%), Gaps = 98/572 (17%)
Query: 342 EVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV-VDESMLSGESLPVFKEEGFTVSAGTI 400
EVP D + GD + + G+ IP D RV++ R + +++S L+GESLPV E F
Sbjct: 143 EVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPV---EKFVEDKRAR 199
Query: 401 NWDGPLRIEA-CSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAG-----PFVYSVMTL 454
+ L E C G+N ++S V A G LA A F V ++
Sbjct: 200 D-PEILERENLCFMGTN-VLSGHAQAVVLATGSSTWFGSLAIAATERRGQTAFDKGVKSV 257
Query: 455 SAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAIL 514
S F + P VL+ + G+ L L ++ V V P L + + +
Sbjct: 258 SKLLIRFMLVM----VPVVLMIN-GLMKGDWLEAFL-FALAVAVGLTPEMLPMIVSSNLA 311
Query: 515 VGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESE-ILKI 573
G +K+ ++++ ++ +D L DKTGTLT+ K + + SE +LK+
Sbjct: 312 KGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKM 371
Query: 574 A-------------------AAVEKTATHPIA----------------KAIVNKAESLNL 598
A A ++++A A + V +
Sbjct: 372 AWLNSYFQTGWKNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEV 431
Query: 599 TSPITRGQLAEPGFGILG-----EVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTH 653
T I +G + E +L G +V + E Q + Q +
Sbjct: 432 TRLICKGAVEE----MLTVCTHKRFGGAVVTLS--ESEKSELQDMTAEMNRQGIRVIAVA 485
Query: 654 QSSELASPSNYSKSVVYVGREGEGII-GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGD 712
+ ++++K+ E + II G + D + + + +L + GI +L+GD
Sbjct: 486 TKTLKVGEADFTKT-----DEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGD 540
Query: 713 REEAVAATAKEVGI-----------------------GKEYINSSLTPQQKSEVISTLQT 749
E A +EVGI K +I + LTP QKS +I L+
Sbjct: 541 NEIVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKK 600
Query: 750 SGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAK 809
+GH V +GDGINDAP+L ADVGI+ ++ + A A+ IILL L + + + +
Sbjct: 601 AGHTVGFLGDGINDAPALRKADVGIS--VDTAADIAKEASDIILLEKSLMVLEEGVIEGR 658
Query: 810 ATMAKVYQNLSWAVAYNVVAI--PIAAGALLP 839
T + + L + N + + A A +P
Sbjct: 659 NTFGNILKYLKMTASSNFGNVFSVLVASAFIP 690
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 75.0 bits (184), Expect = 2e-15
Identities = 53/242 (21%), Positives = 81/242 (33%), Gaps = 64/242 (26%)
Query: 539 IDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNL 598
I + D GTLT+G+P V + +L+ AAA + AIV A
Sbjct: 1 IKAVVFDLDGTLTDGEPVV-------PEAEALLEAAAA--------LGVAIVIAAGE--- 42
Query: 599 TSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSEL 658
L G E V + ++
Sbjct: 43 ----------------------NLTKEGREELVRRLLLRALAGEELLEELLR-------- 72
Query: 659 ASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVA 718
+VV V ++G IA++D L A ++ L++ GIK +L+GD
Sbjct: 73 -----AGATVVAVLDLV--VLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTAN 125
Query: 719 ATAKEVGIGKE-------YINSSLTPQQKS--EVISTLQTSGHHVAMVGDGINDAPSLAL 769
A A+ +G+ + P K + L V MVGDG+ND P+
Sbjct: 126 AIARLLGLFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMVGDGVNDIPAAKA 185
Query: 770 AD 771
A
Sbjct: 186 AG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-14
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 26/180 (14%)
Query: 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI----GKEYINSSL 735
G + I+D R + V +L G++ ++++GD +E + A+ +G+ + L
Sbjct: 521 GLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKL 580
Query: 736 ---------------------TPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGI 774
+P+ K +++ LQ G VAM GDG+NDAP+L LAD+G+
Sbjct: 581 DAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGV 640
Query: 775 ALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAA 834
A+ + + A AA +IL + + ++ A++ K + +++ ++ +V A+ + A
Sbjct: 641 AMG-QTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIA 699
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 9e-14
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 42/199 (21%)
Query: 678 IIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI----------- 726
IG + + D R + + + GI+ ++++GD +E A + +GI
Sbjct: 528 FIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKS 587
Query: 727 --GKEY----------------INSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLA 768
G+E+ + S + P KSE++ LQ G VAM GDG+NDAP+L
Sbjct: 588 FTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALK 647
Query: 769 LADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAY--- 825
AD+GIA+ + A A+ ++L + + +V A++ +A +Y N+ + Y
Sbjct: 648 KADIGIAMG--SGTEVAKEASDMVLADDNFATIVAAVEEGRA----IYNNMKQFIRYMIS 701
Query: 826 ----NVVAIPIAAGALLPQ 840
VV I + A +P+
Sbjct: 702 SNIGEVVCIFLTAALGIPE 720
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 74.4 bits (183), Expect = 2e-13
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 8/216 (3%)
Query: 342 EVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVV-DESMLSGESLPV--FKEEGFTVSAG 398
++ DI VGD V + G+ +P DG ++G S+ DES ++GES P+ + + +G
Sbjct: 179 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGPVQDPFLLSG 238
Query: 399 TINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAAT 458
T+ +G R+ + G NS K++ + +A P+Q +AG M +
Sbjct: 239 TVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQEKLSELAGLIGKFGMGSAVLL 298
Query: 459 F--AFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVG 516
F Y+ I D ++ + L ++V ++VV+ P L LA A+
Sbjct: 299 FLVLSLRYVFRIIRGDGRDTEE---DAQTFLDHFIIAVTIVVVAVPEGLPLAVTIALAYS 355
Query: 517 TSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTE 552
K L+R E + + DKTGTLT+
Sbjct: 356 MKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQ 391
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 7e-13
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 25/126 (19%)
Query: 692 AEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI-------GKEY-------------- 730
A + +L++ G+ +L+GD A +EVG+ G E
Sbjct: 555 AAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEE 614
Query: 731 --INSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTA 788
+ + LTP QKS V+ LQ +GH V +GDGINDAP+L ADVGI+ +++ + A +
Sbjct: 615 RTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGIS--VDSGADIAKES 672
Query: 789 ASIILL 794
A IILL
Sbjct: 673 ADIILL 678
|
Length = 903 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 1e-12
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 672 GREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI----- 726
+G +IG + I D LR V+ Q+ GI +++GD + A A+ GI
Sbjct: 567 PNKGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG 626
Query: 727 ----GKEYINSSL----------------TPQQKSEVISTLQTSGHHVAMVGDGINDAPS 766
GKE+ + +P K ++ L+ G VA+ GDG NDAP+
Sbjct: 627 LAMEGKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPA 686
Query: 767 LALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYN 826
L LADVG ++ I E A A+ IILL + + +V A+ + + + L + + N
Sbjct: 687 LKLADVGFSMGISGTE-VAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVN 745
Query: 827 VVAIPIA-AGALLPQ 840
VVA+ + G+ +
Sbjct: 746 VVAVILTFVGSCISS 760
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 69.7 bits (170), Expect = 5e-12
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 36/163 (22%)
Query: 679 IGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI------------ 726
+G I I D R+++ V Q GI +L+GD E A A+EVGI
Sbjct: 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEI 697
Query: 727 -------GKEY----------------INSSLTPQQKSEVISTLQTSGHHVAMVGDGIND 763
G ++ + + PQ K ++I L AM GDG+ND
Sbjct: 698 MDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVND 757
Query: 764 APSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806
+PSL +A+VGIA+ I + A A+ I+L + + +++A++
Sbjct: 758 SPSLKMANVGIAMGINGSD-VAKDASDIVLSDDNFASILNAIE 799
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 8e-12
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 25/140 (17%)
Query: 678 IIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVG-------IGKEY 730
+ G IA D + +++L+ G+ +L+GD E A EVG IG +
Sbjct: 541 LEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAGEVLIGSDI 600
Query: 731 INSS----------------LTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGI 774
S LTP K +++ L+ GH V +GDGINDAP+L AD+GI
Sbjct: 601 ETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGI 660
Query: 775 ALQIEAQENAASTAASIILL 794
+ ++ + A AA IILL
Sbjct: 661 S--VDGAVDIAREAADIILL 678
|
Length = 902 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 2e-09
Identities = 33/97 (34%), Positives = 58/97 (59%), Gaps = 6/97 (6%)
Query: 736 TPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLG 795
+PQQK ++ Q G VA+ GDG+ND+P+L AD+G+A+ I A + + AA +ILL
Sbjct: 668 SPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGI-AGSDVSKQAADMILLD 726
Query: 796 NKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVA-IP 831
+ + +V ++ + ++ NL ++AY + + IP
Sbjct: 727 DNFASIVTGVEEGRL----IFDNLKKSIAYTLTSNIP 759
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 56.0 bits (135), Expect = 3e-09
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 678 IIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTP 737
++ IA L + T++ L + + SGDR+ ++ A+ VGI E + + P
Sbjct: 21 VLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADP 79
Query: 738 QQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIA-LQIEAQENAASTAASIILLGN 796
+ K+++I L+ V MVG+G ND +L AD+GI +Q E A ++
Sbjct: 80 EMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVV---- 135
Query: 797 KLSQVVDALDLAKATMA 813
L ++ + LDL K T
Sbjct: 136 -LKEIAEILDLLKDTSE 151
|
Length = 152 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 1e-08
Identities = 67/265 (25%), Positives = 113/265 (42%), Gaps = 27/265 (10%)
Query: 341 VEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV-VDESMLSGESLPVFK---------- 389
+ D+ GD V + G+ +P D RVL+ +++ VD+S+L+GES+ V K
Sbjct: 84 SVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERA 143
Query: 390 ---EEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGP 446
++ + +GT+ G R TG ++ I KI + A+ + P+Q+ D G
Sbjct: 144 VNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEF-GE 202
Query: 447 FVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNG--NPLLLSLKLSVDVLVVSCPCA 504
+ V+ L + IG +D A G + K++V + V + P
Sbjct: 203 LLSKVIGLICI-LVWVINIGH-------FNDPALGGGWIQGAIYYFKIAVALAVAAIPEG 254
Query: 505 LGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV 564
L T + +GT AK+ ++R +E L + DKTGTLT + +V V +
Sbjct: 255 LPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALD 314
Query: 565 YDESEILKIAAAVEKTATHPIAKAI 589
S + + V T P I
Sbjct: 315 PSSSSLNEF--CVTGTTYAPEGGVI 337
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 1e-08
Identities = 62/245 (25%), Positives = 93/245 (37%), Gaps = 56/245 (22%)
Query: 341 VEVPTDDIRVGDSVLV--LPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAG 398
V + +D++ GD V + +T+P D +L+G +V+ESML+GES+PV K
Sbjct: 240 VTIASDELVPGDIVSIPRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLKF------PI 293
Query: 399 TINWDGPLRIEACSTGSNSMI---SKIVSMVEEAQGREAPIQRLADAIA---------GP 446
N D + T ++ +KI+ Q R P AI G
Sbjct: 294 PDNGDDDEDLFLYETSKKHVLFGGTKIL------QIRPYPGDTGCLAIVVRTGFSTSKGQ 347
Query: 447 FVYSVM------------------TLSA-ATFAFWYYIGSQIFPDVLLSDMAGPNGNPLL 487
V S++ L+ A F Y I + L P G +L
Sbjct: 348 LVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTI-------IELIKDGRPLGKIIL 400
Query: 488 LSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKT 547
SL D++ + P AL I + K+G+ + +ID DKT
Sbjct: 401 RSL----DIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKT 456
Query: 548 GTLTE 552
GTLTE
Sbjct: 457 GTLTE 461
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 5e-08
Identities = 24/54 (44%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 737 PQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAAS 790
P QK ++ LQ + V M GDG ND +L ADVGI+L E AS AA
Sbjct: 787 PDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISL----SEAEASVAAP 836
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 8e-07
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 76 LDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESL 135
L V GM C GCV++++ L V+SV V++ T A ++ + EE++ + E
Sbjct: 2 LSVEGMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVE--YDPEVSPEELLEAI-EDA 58
Query: 136 GKR 138
G +
Sbjct: 59 GYK 61
|
HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 4e-06
Identities = 97/488 (19%), Positives = 173/488 (35%), Gaps = 67/488 (13%)
Query: 351 GDSVLVLPGETIPVDGRVL-AGRSVVDESMLSGESLPVFK--------------EEGFTV 395
GD V + G+ +P D R++ A +DES L+GE+ PV K E
Sbjct: 138 GDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIA 197
Query: 396 SAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLS 455
GT+ G + TGSN+ + M++ + + P+Q+ D + LS
Sbjct: 198 FMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLG-------KQLS 250
Query: 456 AATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILV 515
+F IG G L +SV + V + P L + + +
Sbjct: 251 LVSFGV---IGVICLVGWFQ-------GKDWLEMFTISVSLAVAAIPEGLPIIVTVTLAL 300
Query: 516 GTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAV----------FNVASFVY 565
G +K+ ++R +E L ++ + DKTGTLT+ V + +
Sbjct: 301 GVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSL 360
Query: 566 DESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQ---LAEPGFGILGEVDGRL 622
++ + + V I+ +A +L + L P L E+ +
Sbjct: 361 NQFGEVIVDGDVLHGFYTVAVSRIL-EAGNLCNNAKFRNEADTLLGNPTDVALIELLMKF 419
Query: 623 VAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAI 682
E Y R + S+ + + H+ + ++ E ++
Sbjct: 420 GLDDLRE-TYIRVAEVPFSSERKWMAVKCVHRQD--------RSEMCFMKGAYEQVLKYC 470
Query: 683 AI---SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAA---TAKEVGIGKEYINSSLT 736
D R + Q+ + +G R A A+ + +G IN
Sbjct: 471 TYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPR 530
Query: 737 PQQKSEVISTLQTSGHHVAMV-GDGINDAPSLALADVGIALQIEAQENAASTAASIILLG 795
P K E ++TL T G + M+ GD A S+A +G+ + + A +
Sbjct: 531 PGVK-EAVTTLITGGVRIIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDA---MDD 585
Query: 796 NKLSQVVD 803
+LSQ+V
Sbjct: 586 QQLSQIVP 593
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 4e-06
Identities = 59/228 (25%), Positives = 98/228 (42%), Gaps = 30/228 (13%)
Query: 342 EVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV-VDESMLSGESLPVFKEEGFTVSA--- 397
+ + + VGD V V G+ IP D R+++ + VD S L+GES P + FT
Sbjct: 153 SINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLE 212
Query: 398 -------GTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYS 450
T +G R +TG +++ +I S+ + + PI AI
Sbjct: 213 TRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASGLENGKTPI-----AIEIEHFIH 267
Query: 451 VMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATP 510
++T A ++I S I G L ++ + ++V + P L LAT
Sbjct: 268 IITGVAVFLGVSFFILSLIL------------GYTWLEAVIFLIGIIVANVPEGL-LATV 314
Query: 511 TAILVGTSLG-AKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAV 557
T L T+ A++ L++ + +E L + DKTGTLT+ + V
Sbjct: 315 TVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTV 362
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 8e-06
Identities = 67/295 (22%), Positives = 118/295 (40%), Gaps = 65/295 (22%)
Query: 301 RASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGE 360
+A M+ L +L S + VI + +S DAI + D+ GD L+ G+
Sbjct: 104 KAEKTMDSLKNLASPMAH-VIRNGKS----------DAI----DSHDLVPGDICLLKTGD 148
Query: 361 TIPVDGRVLAGRSV-VDESMLSGESLPVFKEEGFT------VSAG---------TINWDG 404
TIP D R++ ++ DE++L+GESLPV K+ T G + G
Sbjct: 149 TIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKG 208
Query: 405 PLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLAD--------------AIAGPFVYS 450
+ +T NS I I + + QG QR + +
Sbjct: 209 RAKGICIATALNSEIGAIAAGL---QGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGA 265
Query: 451 VMTLSAAT-----------FAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVV 499
+ L+ T F I I V+ + + + ++ L++ ++
Sbjct: 266 FLGLNVGTPLHRKLSKLAVILFCIAIIFAII--VMAAHKFDVDKEVAIYAICLAISII-- 321
Query: 500 SCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGK 554
P +L + +G + +K+ +++R D LE L ++ + DKTGT+T+GK
Sbjct: 322 --PESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGK 374
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 1e-05
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 76 LDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESE 125
L V GM C GC +V+ L+ V SV+V++ T + + ++ +
Sbjct: 2 LRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEK 51
|
Length = 62 |
| >gnl|CDD|225328 COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 3e-05
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
L V GM CG CV V+ L D V SV V++ TA + + V+ E ++ +
Sbjct: 2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDI-EAIIEAI 60
Query: 132 AES 134
++
Sbjct: 61 EDA 63
|
Length = 71 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 9e-05
Identities = 25/107 (23%), Positives = 37/107 (34%), Gaps = 19/107 (17%)
Query: 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI----------------GKEYI 731
L AE V +L+ G K +++SG V A+ +GI G+
Sbjct: 78 LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVG 137
Query: 732 NSSLTP---QQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIA 775
+ E+ + L GD ND P L A + IA
Sbjct: 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIA 184
|
Length = 212 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 2e-04
Identities = 18/56 (32%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 335 CSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV-VDESMLSGESLPVFK 389
++ + E+P ++ GD V + G+ IP D R++ R + + +++L+GE+LPV K
Sbjct: 159 GAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEK 214
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-04
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 341 VEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV-VDESMLSGESLPVFK 389
+E+P D + GD + + G+ IP D R+L R + V ++ L+GESLPV K
Sbjct: 176 LEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEK 225
|
Length = 902 |
| >gnl|CDD|233437 TIGR01491, HAD-SF-IB-PSPlk, HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 6e-04
Identities = 35/120 (29%), Positives = 49/120 (40%), Gaps = 23/120 (19%)
Query: 676 EGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSL 735
E I I SLR AE VR L++KG+KT ++SG A+++ Y N +
Sbjct: 73 EEIFKEI----SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELV 128
Query: 736 ---------------TPQQKSEVISTLQT----SGHHVAMVGDGINDAPSLALADVGIAL 776
T K E + L+ S VGD ND P +AD+ I+L
Sbjct: 129 FDEKGFIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISL 188
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by This model are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. Length = 201 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.003
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 678 IIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTP 737
I+GA AI D L+ + SL+ GIK +L+GD++E TA +G + + + +T
Sbjct: 717 ILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQE----TAISIGYSSKLLTNKMT- 771
Query: 738 QQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNK 797
++I + + D + + L GI+ AAS ++I+ G
Sbjct: 772 ----QIIINSNSKESCRKSLEDALVMSKKLTTVS-GISQNTGGSSAAASDPVALIIDGTS 826
Query: 798 LSQVVD 803
L V+D
Sbjct: 827 LVYVLD 832
|
Length = 1178 |
| >gnl|CDD|224692 COG1778, COG1778, Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.004
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 694 HTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHH 753
H ++ L + GIK +++G V AK++GI Y S E++ L
Sbjct: 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGISDKLAAFEELLKKLNLDPEE 101
Query: 754 VAMVGDGINDAPSLALADVGIA 775
VA VGD + D P + VG++
Sbjct: 102 VAYVGDDLVDLP--VMEKVGLS 121
|
Length = 170 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 883 | |||
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.95 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.67 | |
| PF00403 | 62 | HMA: Heavy-metal-associated domain; InterPro: IPR0 | 99.23 | |
| COG2608 | 71 | CopZ Copper chaperone [Inorganic ion transport and | 99.18 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.1 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.07 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.03 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.0 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.98 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.97 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.95 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.93 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.91 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.91 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.91 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.87 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.85 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.83 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.81 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.79 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.79 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.77 | |
| PLN02887 | 580 | hydrolase family protein | 98.76 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.6 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.59 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.55 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.5 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.45 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.4 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.34 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.33 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.31 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.23 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.19 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.16 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.16 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.14 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.14 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.12 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.09 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.99 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.97 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 97.94 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.89 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.89 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.84 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.82 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.71 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.7 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 97.66 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 97.64 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.58 | |
| TIGR00003 | 68 | copper ion binding protein. This model describes a | 97.54 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 97.46 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.45 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 97.44 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.43 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.42 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.39 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.34 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.34 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.33 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 97.32 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.26 | |
| PLN02957 | 238 | copper, zinc superoxide dismutase | 97.24 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.24 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.23 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.2 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 97.18 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.18 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.16 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 97.13 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.12 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.11 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.03 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.01 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.98 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.96 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.93 | |
| KOG4656 | 247 | consensus Copper chaperone for superoxide dismutas | 96.92 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.9 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.88 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.85 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.85 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.8 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.79 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.78 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.75 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.72 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 96.69 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.68 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 96.67 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.66 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.61 | |
| PLN02940 | 382 | riboflavin kinase | 96.52 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.5 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.47 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 96.42 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.39 | |
| KOG1603 | 73 | consensus Copper chaperone [Inorganic ion transpor | 96.39 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.38 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 96.23 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 96.18 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 96.17 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.13 | |
| PLN02811 | 220 | hydrolase | 96.1 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 96.08 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.03 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.93 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.92 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.88 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 95.88 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.87 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.82 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.7 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.58 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 95.36 | |
| PLN02580 | 384 | trehalose-phosphatase | 95.2 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 95.17 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.0 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 94.79 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 94.62 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 94.56 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 94.41 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 94.25 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 94.15 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.89 | |
| PLN03017 | 366 | trehalose-phosphatase | 93.86 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 93.69 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 93.51 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.44 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.44 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 93.16 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.03 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 92.61 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 92.55 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 92.54 | |
| TIGR02052 | 92 | MerP mercuric transport protein periplasmic compon | 91.39 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 90.97 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 90.57 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 90.52 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 90.43 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 89.94 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 88.22 | |
| PLN02151 | 354 | trehalose-phosphatase | 88.19 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 87.59 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 86.95 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 86.71 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 86.68 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 85.25 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 84.4 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 83.04 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 82.69 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 81.81 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 81.35 | |
| PRK13748 | 561 | putative mercuric reductase; Provisional | 80.76 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 80.4 |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-137 Score=1205.62 Aligned_cols=704 Identities=42% Similarity=0.612 Sum_probs=628.5
Q ss_pred eEEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCC-HHHHHHHHHhcCCcccccc
Q 002770 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV-AESLGKRLMECGFEAKRRV 150 (883)
Q Consensus 72 ~~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~i~~~i~~~G~~~~~~~ 150 (883)
.+..+.|+||+|++|+++|| .|++++||.+++||+.++++.+.|++.. .+ .+++.+.+++.||.+....
T Consensus 2 ~~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~---------~~~~~~~~~~v~~~gy~~~~~~ 71 (713)
T COG2217 2 RETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEE---------VDLPADIVAAVEKAGYSARLTA 71 (713)
T ss_pred ceeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccc---------cccHHHHHHHHHhcCccccccc
Confidence 35789999999999999999 9999999999999999999999999865 34 7899999999999886511
Q ss_pred cCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhhhhHHHHHHHHHHHh
Q 002770 151 SGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGALF 230 (883)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~ 230 (883)
.. .+....+... . ++.++++++++.+..+.+...+..+. .. ...+|+++++++|+++
T Consensus 72 ~~--------~~~~~~~~~~-~-~~~~~~~~i~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~l~~~v~~ 128 (713)
T COG2217 72 AL--------ADPAEAEARL-L-RELLRRLIIAGLLTLPLLLLSLGLLL---------GA----FLLPWVSFLLATPVLF 128 (713)
T ss_pred cc--------cchhhhhhhh-h-hhHHHHHHHHHHHHHHHHHHHHHhhc---------ch----hhHHHHHHHHHHHHHH
Confidence 11 0001110000 1 33456777777776665543211110 01 2235899999999999
Q ss_pred cccHHHH----HHHHcCCCCchHHHHHHHHHHHHHHHHHHHccCCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 231 GPGRASL----MAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDM 306 (883)
Q Consensus 231 ~~g~~~~----~~l~~~~~~md~Lv~l~~~~a~~~s~~~~~~~~~~~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~ 306 (883)
++|+||| +++|++++|||+|+++|+++||+||.|.++++ .||++++|+++|+++|+++|.+++.|+++++
T Consensus 129 ~~g~~f~~~a~~~l~~~~~~md~Lv~la~~~A~~~s~~~~~~~------~yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai 202 (713)
T COG2217 129 YGGWPFYRGAWRALRRGRLNMDTLVALATIGAYAYSLYATLFP------VYFEEAAMLIFLFLLGRYLEARAKGRARRAI 202 (713)
T ss_pred HHhHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHhhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 78899999999999999999999999988754 7999999999999999999999999999999
Q ss_pred HHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeeceEEeeccccCCCce
Q 002770 307 NELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLP 386 (883)
Q Consensus 307 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGEs~p 386 (883)
++|+++.|+++++++. ||++++||+++|++||+|+|+|||+||+||+|++|++.||||+|||||.|
T Consensus 203 ~~L~~l~p~~A~~~~~--------------~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s~vDeS~iTGEs~P 268 (713)
T COG2217 203 RALLDLAPKTATVVRG--------------DGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSSSVDESMLTGESLP 268 (713)
T ss_pred HHHHccCCCEEEEEec--------------CCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcEEeecchhhCCCCC
Confidence 9999999999988873 34489999999999999999999999999999999999999999999999
Q ss_pred eeccCCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHh
Q 002770 387 VFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIG 466 (883)
Q Consensus 387 v~K~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~ 466 (883)
+.|.+||.|++||+|.+|.++++|+++|.+|++++|+++++++|.+|+|+|+++||++.+|+|.++++++++|++|++.+
T Consensus 269 V~k~~Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~ 348 (713)
T COG2217 269 VEKKPGDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG 348 (713)
T ss_pred EecCCCCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887765
Q ss_pred cCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecC
Q 002770 467 SQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDK 546 (883)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDK 546 (883)
. .++..++.++++||+++|||||++|+|++++.++++++|+||++|+++++|+++++|+++|||
T Consensus 349 ~----------------~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDK 412 (713)
T COG2217 349 G----------------GDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDK 412 (713)
T ss_pred C----------------CcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeC
Confidence 3 234567899999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCceEEEEEeccCCChHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCCCCcCcccccCceEEEEECCEEEEec
Q 002770 547 TGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVG 626 (883)
Q Consensus 547 TGTLT~~~~~v~~v~~~~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~~~~G 626 (883)
|||||+|+|+|+++...+.+++++|++++++|+.|+||+++||++++++.+ .+....+++.+|+|+.+.++|+.+.+|
T Consensus 413 TGTLT~G~p~v~~v~~~~~~e~~~L~laAalE~~S~HPiA~AIv~~a~~~~--~~~~~~~~~i~G~Gv~~~v~g~~v~vG 490 (713)
T COG2217 413 TGTLTEGKPEVTDVVALDGDEDELLALAAALEQHSEHPLAKAIVKAAAERG--LPDVEDFEEIPGRGVEAEVDGERVLVG 490 (713)
T ss_pred CCCCcCCceEEEEEecCCCCHHHHHHHHHHHHhcCCChHHHHHHHHHHhcC--CCCccceeeeccCcEEEEECCEEEEEc
Confidence 999999999999998764478899999999999999999999999998877 344455899999999999999999999
Q ss_pred CHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEE
Q 002770 627 TLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKT 706 (883)
Q Consensus 627 s~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v 706 (883)
+++++.+....... .. .. ......+|+++++++.||. ++|+++++|++|++++++|++||++|+++
T Consensus 491 ~~~~~~~~~~~~~~---~~---~~-------~~~~~~~G~t~v~va~dg~-~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~ 556 (713)
T COG2217 491 NARLLGEEGIDLPL---LS---ER-------IEALESEGKTVVFVAVDGK-LVGVIALADELRPDAKEAIAALKALGIKV 556 (713)
T ss_pred CHHHHhhcCCCccc---hh---hh-------HHHHHhcCCeEEEEEECCE-EEEEEEEeCCCChhHHHHHHHHHHCCCeE
Confidence 99999875432211 00 00 1113457889999999997 99999999999999999999999999999
Q ss_pred EEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHH
Q 002770 707 LLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAAS 786 (883)
Q Consensus 707 ~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~ 786 (883)
+|+|||++.+|+++|+++||+ ++++++.||||.++|+.||++|++|+|||||+||+|||++||||||| +.|+|.++
T Consensus 557 ~mLTGDn~~~A~~iA~~lGId--~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm--G~GtDvA~ 632 (713)
T COG2217 557 VMLTGDNRRTAEAIAKELGID--EVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM--GSGTDVAI 632 (713)
T ss_pred EEEcCCCHHHHHHHHHHcChH--hheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee--cCCcHHHH
Confidence 999999999999999999996 89999999999999999999999999999999999999999999999 77999999
Q ss_pred hhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHHHHhhhhhHHHHHhhh
Q 002770 787 TAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSL 866 (883)
Q Consensus 787 ~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~~nsl 866 (883)
++||+++++||+..++++++++|+++++||||+.|+++||+++||+|++++ ++|++|+++|.+||++|++|||
T Consensus 633 eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g~-------l~p~~A~~am~~SSv~VvlNaL 705 (713)
T COG2217 633 EAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGGL-------LTPWIAALAMSGSSVLVVLNAL 705 (713)
T ss_pred HhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------cCHHHHHHHHcccHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999764 7899999999999999999999
Q ss_pred hcccc
Q 002770 867 LLQFH 871 (883)
Q Consensus 867 ~l~~~ 871 (883)
||+..
T Consensus 706 RL~~~ 710 (713)
T COG2217 706 RLLRS 710 (713)
T ss_pred Hhhcc
Confidence 99863
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-134 Score=1148.82 Aligned_cols=748 Identities=38% Similarity=0.572 Sum_probs=658.7
Q ss_pred eEEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCccccccc
Q 002770 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVS 151 (883)
Q Consensus 72 ~~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 151 (883)
.++.|.|.||+|.+|+..||+.+.+++||.++++++.++++.|.||+.. +.+.++.+.++..||++.....
T Consensus 146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~---------~~pr~i~k~ie~~~~~~~~~~~ 216 (951)
T KOG0207|consen 146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEI---------TGPRDIIKAIEETGFEASVRPY 216 (951)
T ss_pred CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccc---------cChHHHHHHHHhhcccceeeec
Confidence 6899999999999999999999999999999999999999999999988 8999999999999999887753
Q ss_pred CCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhhhhccchhhhhhhhhHHHHHHHHHHHh
Q 002770 152 GTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGSHASHI-LHSLGIHIAHGPLWELLDNSYVKGGFALGALF 230 (883)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~ 230 (883)
..... ....+..+++++|++.++.+..+.++++......+ +....... ...++.+....+++++|++|++|
T Consensus 217 ~~~~~-------~~~l~~~~ei~~w~~~fl~s~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~L~~~vqf 288 (951)
T KOG0207|consen 217 GDTTF-------KNSLKHKEEIRKWKRPFLISLGFSLPVSFAMIICPPLAWILALL-VPFLPGLSYGNSLSFVLATPVQF 288 (951)
T ss_pred cccch-------hhhhhhhhHHHhcchHHHHHHHHHHHHHHHHHHhccchhhhhhh-ccccccchhhhHHHhhhheeeEE
Confidence 31110 10112345677888888888777766665422111 00000000 11222333446889999999999
Q ss_pred cccHHHH----HHHHcCCCCchHHHHHHHHHHHHHHHHHHHccCC-ccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 231 GPGRASL----MAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPEL-EWDASFFEEPVMLLGFVLLGRSLEERARIRASSD 305 (883)
Q Consensus 231 ~~g~~~~----~~l~~~~~~md~Lv~l~~~~a~~~s~~~~~~~~~-~~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~~~ 305 (883)
..|++|| ++|++|+.|||+|++|++.+||+||++..+..-. ..+.+|||++.|++.|+.+|||+|.+++.|++++
T Consensus 289 ~~G~~fy~~A~ksL~~g~~nMdvLv~L~t~aay~~S~~~~~~~~~~~~~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~a 368 (951)
T KOG0207|consen 289 VGGRPFYLAAYKSLKRGSANMDVLVVLGTTAAYFYSIFSLLAAVVFDSPPTFFDTSPMLITFITLGRWLESLAKGKTSEA 368 (951)
T ss_pred ecceeeHHHHHHHHhcCCCCceeehhhHHHHHHHHHHHHHHHHHHccCcchhccccHHHHHHHHHHHHHHHHhhccchHH
Confidence 9999998 9999999999999999999999999887543210 1257899999999999999999999999999999
Q ss_pred HHHHHcccccceEEEEcCCCCCCCCCccccCCCe-EEEeeCCCcCCCCEEEECCCCeeeeeEEEEeeceEEeeccccCCC
Q 002770 306 MNELLSLVSTQSRLVITSSESGSSADNVLCSDAI-CVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGES 384 (883)
Q Consensus 306 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~-~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGEs 384 (883)
+.+|+++.|.++.++. +|+ +++||.+.|++||+|.|+||++||+||+|++|++.||||++|||+
T Consensus 369 lskLmsl~p~~a~ii~---------------~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gss~VDEs~iTGEs 433 (951)
T KOG0207|consen 369 LSKLMSLAPSKATIIE---------------DGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGSSEVDESLITGES 433 (951)
T ss_pred HHHHhhcCcccceEee---------------cCCcceEeeeeeeccCCEEEECCCCccccccEEEeCceeechhhccCCc
Confidence 9999999999999887 443 799999999999999999999999999999999999999999999
Q ss_pred ceeeccCCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 002770 385 LPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYY 464 (883)
Q Consensus 385 ~pv~K~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~ 464 (883)
+||.|++|+.|.+||+|.+|.+.++++++|.||.+++|+++++++|.+|+|+|+++|+++.||+|.++++++++|++|.+
T Consensus 434 ~PV~Kk~gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~ 513 (951)
T KOG0207|consen 434 MPVPKKKGSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWIL 513 (951)
T ss_pred eecccCCCCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEe
Q 002770 465 IGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLAL 544 (883)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~f 544 (883)
++...+... ..+...+..+|+++++|++++|||+|+||+|+++++|++.+|++|+|+|++++||++.++++++|
T Consensus 514 ~g~~~~~~~------~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvF 587 (951)
T KOG0207|consen 514 IGKIVFKYP------RSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVF 587 (951)
T ss_pred HccccccCc------chhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEE
Confidence 876432111 11226678889999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccCCceEEEEEeccC--CChHHHHHHHHHhhhccCChHHHHHHHHHHhcCCC--CCCCcCcccccCce--EEEEE
Q 002770 545 DKTGTLTEGKPAVFNVASFV--YDESEILKIAAAVEKTATHPIAKAIVNKAESLNLT--SPITRGQLAEPGFG--ILGEV 618 (883)
Q Consensus 545 DKTGTLT~~~~~v~~v~~~~--~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~--~~~~~~~~~~~g~g--~~~~~ 618 (883)
|||||||+|+|.|.++.... .+..++|.++++.|+.++||+++||++|+++.+.. ......+.+.||.| +...+
T Consensus 588 DKTGTLT~G~~~V~~~~~~~~~~~~~e~l~~v~a~Es~SeHPig~AIv~yak~~~~~~~~~~~~~~~~~pg~g~~~~~~~ 667 (951)
T KOG0207|consen 588 DKTGTLTEGKPTVVDFKSLSNPISLKEALALVAAMESGSEHPIGKAIVDYAKEKLVEPNPEGVLSFEYFPGEGIYVTVTV 667 (951)
T ss_pred cCCCceecceEEEEEEEecCCcccHHHHHHHHHHHhcCCcCchHHHHHHHHHhcccccCccccceeecccCCCcccceEE
Confidence 99999999999999987653 46889999999999999999999999999988732 22345778889999 66788
Q ss_pred CCEEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHH
Q 002770 619 DGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRS 698 (883)
Q Consensus 619 ~g~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~ 698 (883)
++..+.+|+.+|+.+......+ + ....++ ..+..|+++++++.++. +.|++.++|++|+|+..+|+.
T Consensus 668 ~~~~i~iGN~~~~~r~~~~~~~--~---i~~~~~-------~~e~~g~tvv~v~vn~~-l~gv~~l~D~vr~~a~~av~~ 734 (951)
T KOG0207|consen 668 DGNEVLIGNKEWMSRNGCSIPD--D---ILDALT-------ESERKGQTVVYVAVNGQ-LVGVFALEDQVRPDAALAVAE 734 (951)
T ss_pred eeeEEeechHHHHHhcCCCCch--h---HHHhhh-------hHhhcCceEEEEEECCE-EEEEEEeccccchhHHHHHHH
Confidence 9999999999999886544322 1 222222 13567999999999998 999999999999999999999
Q ss_pred HHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeec
Q 002770 699 LQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQI 778 (883)
Q Consensus 699 L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~ 778 (883)
||++|++++|+||||..+|+++|+++||+ .+|+++.|+||.++|+.+|+++..|+|||||+||+|||++|||||+|
T Consensus 735 Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~--~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai-- 810 (951)
T KOG0207|consen 735 LKSMGIKVVMLTGDNDAAARSVAQQVGID--NVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI-- 810 (951)
T ss_pred HHhcCceEEEEcCCCHHHHHHHHHhhCcc--eEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee--
Confidence 99999999999999999999999999986 89999999999999999999999999999999999999999999999
Q ss_pred CCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHHHHhhhhh
Q 002770 779 EAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSS 858 (883)
Q Consensus 779 ~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ss 858 (883)
+.|++.|.++||+|++.||+.+++.+++++|+++++||+|+.|+++||+++||+|+|+|.| ||+.|+||.|+++|++||
T Consensus 811 g~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P-~~~~L~Pw~A~lama~SS 889 (951)
T KOG0207|consen 811 GAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAP-FGIVLPPWMASLAMAASS 889 (951)
T ss_pred ccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccC-CccccCchHHHHHHHhhh
Confidence 7789999999999999999999999999999999999999999999999999999999998 458899999999999999
Q ss_pred HHHHHhhhhcccccccc
Q 002770 859 IFVVSNSLLLQFHEFES 875 (883)
Q Consensus 859 l~v~~nsl~l~~~~~~~ 875 (883)
+.|++|||+|+++.+|.
T Consensus 890 vsVv~sSllLk~~k~p~ 906 (951)
T KOG0207|consen 890 VSVVLSSLLLKRYKKPT 906 (951)
T ss_pred HHHhhhHHHHhhccccc
Confidence 99999999998776664
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-114 Score=1060.83 Aligned_cols=722 Identities=35% Similarity=0.544 Sum_probs=621.2
Q ss_pred eEEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCccccccc
Q 002770 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVS 151 (883)
Q Consensus 72 ~~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 151 (883)
.++.+.++||+|++|++.+++.+.+.+||.++++++.+++..+.. . .+.+++.+.+++.||++.+..+
T Consensus 99 ~~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~---~---------~s~~~I~~~I~~~Gy~a~~~~~ 166 (834)
T PRK10671 99 DSQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMG---S---------ASPQDLVQAVEKAGYGAEAIED 166 (834)
T ss_pred ceEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEc---c---------CCHHHHHHHHHhcCCCcccccc
Confidence 357899999999999999999999999999999999999987763 2 2567788888999999765432
Q ss_pred CCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhhhhHHH-HHHHHHHHh
Q 002770 152 GTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVK-GGFALGALF 230 (883)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~l~~~~~~ 230 (883)
+.. ... ...+..+++.+++++++.++++++++.++.. ++ +.++...+... ..|+. +++++|+++
T Consensus 167 ~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~ 231 (834)
T PRK10671 167 DAK--RRE----RQQETAQATMKRFRWQAIVALAVGIPVMVWG---MI---GDNMMVTADNR---SLWLVIGLITLAVMV 231 (834)
T ss_pred ccc--hhh----hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HH---hhhcccCccch---hHHHHHHHHHHHHHH
Confidence 110 000 0011111222345566777766655444321 11 10000001000 12553 567889999
Q ss_pred cccHHHH----HHHHcCCCCchHHHHHHHHHHHHHHHHHHHccC---CccCccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 231 GPGRASL----MAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPE---LEWDASFFEEPVMLLGFVLLGRSLEERARIRAS 303 (883)
Q Consensus 231 ~~g~~~~----~~l~~~~~~md~Lv~l~~~~a~~~s~~~~~~~~---~~~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~ 303 (883)
|+|+||| +++++|++|||+|+++|+++||++|++.++..+ .+..+.||++++|+++|+++|+++|.+++.|++
T Consensus 232 ~~g~~~~~~a~~~l~~~~~~md~l~~l~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~~~ 311 (834)
T PRK10671 232 FAGGHFYRSAWKSLLNGSATMDTLVALGTGAAWLYSMSVNLWPQWFPMEARHLYYEASAMIIGLINLGHMLEARARQRSS 311 (834)
T ss_pred HhhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 888899999999999999999999998765421 011256999999999999999999999999999
Q ss_pred HHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeeceEEeeccccCC
Q 002770 304 SDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGE 383 (883)
Q Consensus 304 ~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGE 383 (883)
+.+++|.++.|+++++++ ||.+++||.++|+|||+|+|++||+||+||+|++|++.||||+||||
T Consensus 312 ~~~~~L~~l~p~~a~~~~---------------~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~~~vdeS~lTGE 376 (834)
T PRK10671 312 KALEKLLDLTPPTARVVT---------------DEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGE 376 (834)
T ss_pred HHHHHHhccCCCEEEEEe---------------CCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEceEEEeehhhcCC
Confidence 999999999999999988 77789999999999999999999999999999999999999999999
Q ss_pred CceeeccCCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHH
Q 002770 384 SLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWY 463 (883)
Q Consensus 384 s~pv~K~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~ 463 (883)
|.|+.|++||.||+||+|.+|.++++|+++|.+|.+++|++++++++.+|+|+|+++|+++.+|+|++++++++++++|+
T Consensus 377 s~pv~k~~gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~ 456 (834)
T PRK10671 377 PIPQQKGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWY 456 (834)
T ss_pred CCCEecCCCCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEE
Q 002770 464 YIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLA 543 (883)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~ 543 (883)
+.+.. ..+..++.+++++|+++|||||++++|+++..++++++|+||++|+++++|+++++|++|
T Consensus 457 ~~~~~---------------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~ 521 (834)
T PRK10671 457 FFGPA---------------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLV 521 (834)
T ss_pred HhCCc---------------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEE
Confidence 64321 123456788999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccccCCceEEEEEecc-CCChHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCCCCcCcccccCceEEEEECCEE
Q 002770 544 LDKTGTLTEGKPAVFNVASF-VYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRL 622 (883)
Q Consensus 544 fDKTGTLT~~~~~v~~v~~~-~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~ 622 (883)
||||||||+|+|+|.++... +.++++++.+++++|+.++||+++||+++++.. ..+...+++..+|.|+.+.++|+.
T Consensus 522 fDKTGTLT~g~~~v~~~~~~~~~~~~~~l~~a~~~e~~s~hp~a~Ai~~~~~~~--~~~~~~~~~~~~g~Gv~~~~~g~~ 599 (834)
T PRK10671 522 FDKTGTLTEGKPQVVAVKTFNGVDEAQALRLAAALEQGSSHPLARAILDKAGDM--TLPQVNGFRTLRGLGVSGEAEGHA 599 (834)
T ss_pred EcCCCccccCceEEEEEEccCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHhhC--CCCCcccceEecceEEEEEECCEE
Confidence 99999999999999988754 456788999999999999999999999988643 334556788999999999999999
Q ss_pred EEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHC
Q 002770 623 VAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQK 702 (883)
Q Consensus 623 ~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~ 702 (883)
+.+|+++++.+.... ...+..... ...+.|.+++++++++. ++|++.+.|++|++++++|++|++.
T Consensus 600 ~~~G~~~~~~~~~~~------~~~~~~~~~-------~~~~~g~~~v~va~~~~-~~g~~~l~d~~r~~a~~~i~~L~~~ 665 (834)
T PRK10671 600 LLLGNQALLNEQQVD------TKALEAEIT-------AQASQGATPVLLAVDGK-AAALLAIRDPLRSDSVAALQRLHKA 665 (834)
T ss_pred EEEeCHHHHHHcCCC------hHHHHHHHH-------HHHhCCCeEEEEEECCE-EEEEEEccCcchhhHHHHHHHHHHC
Confidence 999999998653211 111111111 12456889999999987 9999999999999999999999999
Q ss_pred CCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCcc
Q 002770 703 GIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQE 782 (883)
Q Consensus 703 Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~ 782 (883)
|++++|+|||+..++..+++++||+ .+++++.|++|.++++.++.+++.|+|+|||.||++|++.||+||+| ++++
T Consensus 666 gi~v~~~Tgd~~~~a~~ia~~lgi~--~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~--g~g~ 741 (834)
T PRK10671 666 GYRLVMLTGDNPTTANAIAKEAGID--EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM--GGGS 741 (834)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCC--EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe--cCCC
Confidence 9999999999999999999999997 79999999999999999999999999999999999999999999999 7899
Q ss_pred HHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHHHHhhhhhHHHH
Q 002770 783 NAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVV 862 (883)
Q Consensus 783 ~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~ 862 (883)
+.++++||++++++++..|+++++++|+++++|+||+.|+++||+++||+|+|.++|.+|+.++|++|+++|.+||++|+
T Consensus 742 ~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~g~~~p~~g~~l~p~~a~~~m~~ss~~vv 821 (834)
T PRK10671 742 DVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAAGILWPFTGTLLNPVVAGAAMALSSITVV 821 (834)
T ss_pred HHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhhhhcccCHHHHHHHhcccceeeh
Confidence 99999999999999999999999999999999999999999999999999999999988877999999999999999999
Q ss_pred Hhhhhccc
Q 002770 863 SNSLLLQF 870 (883)
Q Consensus 863 ~nsl~l~~ 870 (883)
+||+||+.
T Consensus 822 ~nslrl~~ 829 (834)
T PRK10671 822 SNANRLLR 829 (834)
T ss_pred hhhHHhcC
Confidence 99999974
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-110 Score=1006.67 Aligned_cols=683 Identities=31% Similarity=0.443 Sum_probs=588.5
Q ss_pred cceEEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCccccc
Q 002770 70 VDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRR 149 (883)
Q Consensus 70 ~~~~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~ 149 (883)
...+..++++||+|++|++.+|+.+.+.+||.++++++.+++..+.|++.. . +++.+.+++.||++...
T Consensus 51 ~~~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~----------~-~~I~~aI~~~Gy~a~~~ 119 (741)
T PRK11033 51 SGTRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI----------R-AQVESAVQKAGFSLRDE 119 (741)
T ss_pred CCceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccc----------h-HHHHHHHHhcccccccc
Confidence 345678999999999999999999999999999999999999999987654 3 67778889999987543
Q ss_pred ccCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhhhhHHHHHHHHHHH
Q 002770 150 VSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKGGFALGAL 229 (883)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~ 229 (883)
... . + ....+ .. +..++.+. + +.+|+ .++++.... +. + .|+.+++++
T Consensus 120 ~~~-----~-----~-~~~~~--~~-~~~~~~~~--~-~~~~~-------~~~~~~~~~-~~---~--~~~~~~~~~--- 166 (741)
T PRK11033 120 QAA-----A-----A-APESR--LK-SENLPLIT--L-AVMMA-------ISWGLEQFN-HP---F--GQLAFIATT--- 166 (741)
T ss_pred cch-----h-----h-hHHHH--HH-HHHHHHHH--H-HHHHH-------HHHHHhhhh-hH---H--HHHHHHHHH---
Confidence 211 0 0 00000 00 01111111 1 11111 111110000 10 0 244444433
Q ss_pred hcccHHHH----HHHHcCCC-CchHHHHHHHHHHHHHHHHHHHccCCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 230 FGPGRASL----MAFRKGSP-NMNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASS 304 (883)
Q Consensus 230 ~~~g~~~~----~~l~~~~~-~md~Lv~l~~~~a~~~s~~~~~~~~~~~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~~ 304 (883)
++.|+||| +++|++++ |||+|+++|++++++++ .|++++|+++|+++|+++|.+++.|+++
T Consensus 167 ~~~~~~~~~~a~~~l~~~~~~~~~~L~~~a~~~a~~~~--------------~~~~a~~i~~l~~~g~~le~~~~~ra~~ 232 (741)
T PRK11033 167 LVGLYPIARKALRLIRSGSPFAIETLMSVAAIGALFIG--------------ATAEAAMVLLLFLIGERLEGYAASRARR 232 (741)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHc--------------chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56788888 77888885 99999999999998765 1467889999999999999999999999
Q ss_pred HHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeeceEEeeccccCCC
Q 002770 305 DMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGES 384 (883)
Q Consensus 305 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGEs 384 (883)
.+++|.++.|.++++++ ||++++||+++|+|||+|+|++||+||+||+|++|++.||||+|||||
T Consensus 233 ~~~~L~~l~p~~a~vir---------------~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~g~~~vdes~lTGEs 297 (741)
T PRK11033 233 GVSALMALVPETATRLR---------------DGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASFDESALTGES 297 (741)
T ss_pred HHHHHHhCCCCEEEEEE---------------CCEEEEEEHHHCCCCCEEEECCCCEEecceEEEECcEEeecccccCCC
Confidence 99999999999999988 889999999999999999999999999999999999999999999999
Q ss_pred ceeeccCCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 002770 385 LPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYY 464 (883)
Q Consensus 385 ~pv~K~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~ 464 (883)
.|+.|++||.||+||+|.+|.++++|+++|.+|.++||.+++++++.+++|+|+++|+++.+|+|+++++++++|++|++
T Consensus 298 ~Pv~k~~Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~ 377 (741)
T PRK11033 298 IPVERATGEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPL 377 (741)
T ss_pred CCEecCCCCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998855
Q ss_pred HhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEe
Q 002770 465 IGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLAL 544 (883)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~f 544 (883)
+.. .++...+.+++++|+++|||+|++++|+++..++.+++|+||++|+++++|+|+++|++||
T Consensus 378 ~~~----------------~~~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~f 441 (741)
T PRK11033 378 LFA----------------APWQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAF 441 (741)
T ss_pred Hcc----------------CCHHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEE
Confidence 421 1234567889999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccCCceEEEEEecc-CCChHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCCCCcCcccccCceEEEEECCEEE
Q 002770 545 DKTGTLTEGKPAVFNVASF-VYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLV 623 (883)
Q Consensus 545 DKTGTLT~~~~~v~~v~~~-~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~~ 623 (883)
|||||||+|+|+|.++... +.++++++.+++++|+.+.||+++||++++++.++..+...+++..+|.|+.+.++|+.+
T Consensus 442 DKTGTLT~g~~~v~~~~~~~~~~~~~~l~~aa~~e~~s~hPia~Ai~~~a~~~~~~~~~~~~~~~~~g~Gv~~~~~g~~~ 521 (741)
T PRK11033 442 DKTGTLTEGKPQVTDIHPATGISESELLALAAAVEQGSTHPLAQAIVREAQVRGLAIPEAESQRALAGSGIEGQVNGERV 521 (741)
T ss_pred eCCCCCcCCceEEEEEEecCCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHhcCCCCCCCcceEEEeeEEEEEEECCEEE
Confidence 9999999999999998764 456788999999999999999999999999988888777788889999999999999999
Q ss_pred EecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCC
Q 002770 624 AVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKG 703 (883)
Q Consensus 624 ~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~G 703 (883)
.+|+++++.+. . ++ ...... .++.+|.+++++++++. ++|+++|+|++|+|++++|++||++|
T Consensus 522 ~ig~~~~~~~~-----~-~~---~~~~~~-------~~~~~g~~~v~va~~~~-~~g~i~l~d~~r~~a~~~i~~L~~~g 584 (741)
T PRK11033 522 LICAPGKLPPL-----A-DA---FAGQIN-------ELESAGKTVVLVLRNDD-VLGLIALQDTLRADARQAISELKALG 584 (741)
T ss_pred EEecchhhhhc-----c-HH---HHHHHH-------HHHhCCCEEEEEEECCE-EEEEEEEecCCchhHHHHHHHHHHCC
Confidence 99999998641 0 11 111111 13567899999999987 99999999999999999999999999
Q ss_pred CEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccH
Q 002770 704 IKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQEN 783 (883)
Q Consensus 704 i~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~ 783 (883)
++++|+|||+..++.++|+++||+ +++++.|+||.++|+.||+. +.|+|||||+||+|||+.|||||+| +++++
T Consensus 585 i~~~llTGd~~~~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~--g~~~~ 658 (741)
T PRK11033 585 IKGVMLTGDNPRAAAAIAGELGID---FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAM--GSGTD 658 (741)
T ss_pred CEEEEEcCCCHHHHHHHHHHcCCC---eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEe--cCCCH
Confidence 999999999999999999999995 78899999999999999965 5899999999999999999999999 78999
Q ss_pred HHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHHHHhhhhhHHHHH
Q 002770 784 AASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVS 863 (883)
Q Consensus 784 ~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~~ 863 (883)
.++++||+++.++++..|+++++++|+++++|+||+.|+++||++++|+|+.++ ++||+|+++|.+||++|++
T Consensus 659 ~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g~-------~~~~~a~~~~~~ss~~v~~ 731 (741)
T PRK11033 659 VALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLGI-------TGLWLAVLADSGATALVTA 731 (741)
T ss_pred HHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHcChHHHHHH
Confidence 999999999999999999999999999999999999999999999999997443 6799999999999999999
Q ss_pred hhhhcccc
Q 002770 864 NSLLLQFH 871 (883)
Q Consensus 864 nsl~l~~~ 871 (883)
||+||.++
T Consensus 732 Nslrl~~~ 739 (741)
T PRK11033 732 NALRLLRK 739 (741)
T ss_pred HHHhhccc
Confidence 99998643
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-99 Score=889.12 Aligned_cols=553 Identities=44% Similarity=0.718 Sum_probs=510.1
Q ss_pred cHHHH----HHHHcCCCCchHHHHHHHHHHHHHHHHHHHccCC---ccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 233 GRASL----MAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPEL---EWDASFFEEPVMLLGFVLLGRSLEERARIRASSD 305 (883)
Q Consensus 233 g~~~~----~~l~~~~~~md~Lv~l~~~~a~~~s~~~~~~~~~---~~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~~~ 305 (883)
|+||| +++++|++|||+|+++|++++|++|++.++.+.. .....||++++|+++++++|+++|.+++.|+++.
T Consensus 2 g~~~~~~a~~~l~~~~~~md~l~~~~~~~a~~~s~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~le~~~~~~a~~~ 81 (562)
T TIGR01511 2 GRPFYKSAWKALRHKAPNMDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFILLGRWLEMLAKGRASDA 81 (562)
T ss_pred cHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56776 7888999999999999999999999998875421 1124699999999999999999999999999999
Q ss_pred HHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeeceEEeeccccCCCc
Q 002770 306 MNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESL 385 (883)
Q Consensus 306 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGEs~ 385 (883)
+++|.++.|++++++++ ||.+++||+++|+|||+|+|++||+|||||+|++|++.||||+|||||.
T Consensus 82 ~~~L~~~~p~~a~~~~~--------------~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~~~vdes~lTGEs~ 147 (562)
T TIGR01511 82 LSKLAKLQPSTATLLTK--------------DGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGESEVDESLVTGESL 147 (562)
T ss_pred HHHHHhcCCCEEEEEEC--------------CCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECceEEehHhhcCCCC
Confidence 99999999999998872 5677999999999999999999999999999999999999999999999
Q ss_pred eeeccCCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHH
Q 002770 386 PVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYI 465 (883)
Q Consensus 386 pv~K~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~ 465 (883)
|+.|++||.||+||+|.+|.++++|+++|.+|.+++|++++++++.+|+|+|+++|+++.+|++++++++++++++|.+
T Consensus 148 pv~k~~gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~~- 226 (562)
T TIGR01511 148 PVPKKVGDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWLF- 226 (562)
T ss_pred cEEcCCCCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999988887741
Q ss_pred hcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEec
Q 002770 466 GSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALD 545 (883)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fD 545 (883)
.+.+++++|+++|||+|++++|+++..++++++|+||++|+++++|+|+++|++|||
T Consensus 227 -----------------------~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fD 283 (562)
T TIGR01511 227 -----------------------ALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFD 283 (562)
T ss_pred -----------------------HHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEEC
Confidence 367899999999999999999999999999999999999999999999999999999
Q ss_pred CcccccCCceEEEEEecc-CCChHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCCCCcCcccccCceEEEEECCEEEE
Q 002770 546 KTGTLTEGKPAVFNVASF-VYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVA 624 (883)
Q Consensus 546 KTGTLT~~~~~v~~v~~~-~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~~~ 624 (883)
||||||+|+|+|.++... +.++++++.+++++|+.++||+++||++++++.+.......++++.+|+|+.+.++++.+.
T Consensus 284 KTGTLT~g~~~v~~i~~~~~~~~~~~l~~aa~~e~~s~HPia~Ai~~~~~~~~~~~~~~~~~~~~~g~Gi~~~~~g~~~~ 363 (562)
T TIGR01511 284 KTGTLTQGKPTVTDVHVFGDRDRTELLALAAALEAGSEHPLAKAIVSYAKEKGITLVEVSDFKAIPGIGVEGTVEGTKIQ 363 (562)
T ss_pred CCCCCcCCCEEEEEEecCCCCCHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCcCCCCCeEEECCceEEEEECCEEEE
Confidence 999999999999998754 4567889999999999999999999999998887665556677889999999999999999
Q ss_pred ecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCC
Q 002770 625 VGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGI 704 (883)
Q Consensus 625 ~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi 704 (883)
+|+++++.+.... .. ...++|.++++++.++. ++|.+.++|++||+++++|++||++|+
T Consensus 364 iG~~~~~~~~~~~------~~--------------~~~~~g~~~~~~~~~~~-~~g~~~~~d~l~~~a~e~i~~Lk~~Gi 422 (562)
T TIGR01511 364 LGNEKLLGENAIK------ID--------------GKAEQGSTSVLVAVNGE-LAGVFALEDQLRPEAKEVIQALKRRGI 422 (562)
T ss_pred EECHHHHHhCCCC------CC--------------hhhhCCCEEEEEEECCE-EEEEEEecccccHHHHHHHHHHHHcCC
Confidence 9999998643211 00 11346788999999987 999999999999999999999999999
Q ss_pred EEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHH
Q 002770 705 KTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENA 784 (883)
Q Consensus 705 ~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~ 784 (883)
+++|+|||+...+..+++++||+ +++++.|++|.++++.++++++.|+|||||.||++|++.||+||+| +++++.
T Consensus 423 ~v~ilSgd~~~~a~~ia~~lgi~---~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~--g~g~~~ 497 (562)
T TIGR01511 423 EPVMLTGDNRKTAKAVAKELGIN---VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI--GAGTDV 497 (562)
T ss_pred eEEEEcCCCHHHHHHHHHHcCCc---EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe--CCcCHH
Confidence 99999999999999999999995 8899999999999999999999999999999999999999999999 678899
Q ss_pred HHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHH
Q 002770 785 ASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLS 850 (883)
Q Consensus 785 a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~a 850 (883)
+++.||+++.++++..++++++++|+++++|+||+.|+++||++++|+|+++++| +|+.++|++|
T Consensus 498 a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~~~~-~g~~~~p~~a 562 (562)
T TIGR01511 498 AIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGVLYP-IGILLSPAVA 562 (562)
T ss_pred HHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc-cccccCCCcC
Confidence 9999999999999999999999999999999999999999999999999999888 5777999864
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-92 Score=827.89 Aligned_cols=533 Identities=38% Similarity=0.545 Sum_probs=493.3
Q ss_pred chHHHHHHHHHHHHHHHHHHHccCCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCC
Q 002770 247 MNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSES 326 (883)
Q Consensus 247 md~Lv~l~~~~a~~~s~~~~~~~~~~~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~ 326 (883)
||+|++++++++|+++ .||+ +++++++++++++++.++++|+++.+++|.++.|++++++|
T Consensus 1 ~~~l~~~a~~~~~~~~-------------~~~~-~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r----- 61 (536)
T TIGR01512 1 VDLLMALAALGAVAIG-------------EYLE-GALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLR----- 61 (536)
T ss_pred CcHHHHHHHHHHHHHh-------------hHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-----
Confidence 7999999999999776 2555 47888899999999999999999999999999999999988
Q ss_pred CCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeeceEEeeccccCCCceeeccCCCccccceeeecCcE
Q 002770 327 GSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPL 406 (883)
Q Consensus 327 ~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGEs~pv~K~~g~~v~aGt~~~~G~~ 406 (883)
||++++|++++|+|||+|.|++||+|||||+|++|++.||||+|||||.|+.|++|+.+|+||++.+|.+
T Consensus 62 ----------~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~G~~ 131 (536)
T TIGR01512 62 ----------GGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTSTVDESALTGESVPVEKAPGDEVFAGAINLDGVL 131 (536)
T ss_pred ----------CCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEeCcEEEEecccCCCCCcEEeCCCCEEEeeeEECCceE
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchH
Q 002770 407 RIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPL 486 (883)
Q Consensus 407 ~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (883)
+++|+++|.+|.+|+|.+++++++.+++|+|+.+++++.+|++++++++++++++|++... +
T Consensus 132 ~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~ 193 (536)
T TIGR01512 132 TIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------------------W 193 (536)
T ss_pred EEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------------------c
Confidence 9999999999999999999999999999999999999999999999999888887765321 0
Q ss_pred HHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccCCC
Q 002770 487 LLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYD 566 (883)
Q Consensus 487 ~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~~~ 566 (883)
..++.+++++++++|||+|++++|+++..++.+++|+||++|+++++|+++++|++|||||||||+|+|+|.++.+
T Consensus 194 ~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~---- 269 (536)
T TIGR01512 194 PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVP---- 269 (536)
T ss_pred HHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeH----
Confidence 1257789999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred hHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCCCCcCcccccCceEEEEECCEEEEecCHHHHHHHhhccCCCchhhh
Q 002770 567 ESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQH 646 (883)
Q Consensus 567 ~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~g~~~~~Gs~~~i~~~~~~~~~~~~~~~ 646 (883)
.+++.+++++|+.+.||+++||++++++.+ ...+..+.+|+|+.+.++|..+.+|+++++.+....
T Consensus 270 -~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~----~~~~~~~~~g~gi~~~~~g~~~~ig~~~~~~~~~~~--------- 335 (536)
T TIGR01512 270 -AEVLRLAAAAEQASSHPLARAIVDYARKRE----NVESVEEVPGEGVRAVVDGGEVRIGNPRSLEAAVGA--------- 335 (536)
T ss_pred -HHHHHHHHHHhccCCCcHHHHHHHHHHhcC----CCcceEEecCCeEEEEECCeEEEEcCHHHHhhcCCc---------
Confidence 378999999999999999999999998765 334567889999999999999999999887543210
Q ss_pred HHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCC-EEEEEcCCcHHHHHHHHHHcC
Q 002770 647 LEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGI-KTLLLSGDREEAVAATAKEVG 725 (883)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi-~v~~lTGd~~~~a~~ia~~~g 725 (883)
.....+.+.+++++|+. ++|.+.++|++|++++++|++|+++|+ +++|+|||+..++..+++++|
T Consensus 336 -------------~~~~~~~~~~~v~~~~~-~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lg 401 (536)
T TIGR01512 336 -------------RPESAGKTIVHVARDGT-YLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELG 401 (536)
T ss_pred -------------chhhCCCeEEEEEECCE-EEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcC
Confidence 12345678889999887 999999999999999999999999999 999999999999999999999
Q ss_pred CCCceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecC-CccHHHHhhcCEEEeCCChhhHHHH
Q 002770 726 IGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIE-AQENAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 726 i~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~-~~~~~a~~~ad~vl~~~~~~~l~~~ 804 (883)
++ .+++++.|++|.++++.++++++.|+|+|||.||++|++.||+||++ + ++++.+++.||+++.++++..+.++
T Consensus 402 i~--~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~--g~~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 402 ID--EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM--GASGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred Ch--hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe--CCCccHHHHHhCCEEEECCCHHHHHHH
Confidence 97 78999999999999999999999999999999999999999999999 5 6889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHHHHhhhhhHHHHHhhhhcc
Q 002770 805 LDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQ 869 (883)
Q Consensus 805 i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~~nsl~l~ 869 (883)
+++||+++++|+||+.|++.||++++|+|+.++ ++|++|+++|.+||++|++||+|++
T Consensus 478 i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G~-------~~p~~aa~~m~~ss~~v~~ns~r~~ 535 (536)
T TIGR01512 478 IRLARRTRRIVKQNVVIALGIILLLILLALFGV-------LPLWLAVLGHEGSTVLVILNALRLL 535 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-------ccHHHHHHHHcChHHHHHHHHHhhc
Confidence 999999999999999999999999999998543 7999999999999999999999986
|
. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-92 Score=827.94 Aligned_cols=548 Identities=45% Similarity=0.694 Sum_probs=500.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHccCCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCC
Q 002770 247 MNSLVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSES 326 (883)
Q Consensus 247 md~Lv~l~~~~a~~~s~~~~~~~~~~~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~ 326 (883)
||+|++++++.+|++|.| .+++++++++++++++|.++++|+++.+++|.++.|++++++|
T Consensus 1 ~d~l~~~~~~~~~~~~~~--------------~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r----- 61 (556)
T TIGR01525 1 MDLLMALATIAAYAMGLV--------------LEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQ----- 61 (556)
T ss_pred CcHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEE-----
Confidence 899999999999998843 4678999999999999999999999999999999999999988
Q ss_pred CCCCCccccCC-CeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeeceEEeeccccCCCceeeccCCCccccceeeecCc
Q 002770 327 GSSADNVLCSD-AICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGP 405 (883)
Q Consensus 327 ~~~~~~~~~~d-g~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGEs~pv~K~~g~~v~aGt~~~~G~ 405 (883)
| |++++|+.++|+|||+|.+++||+|||||+|++|++.||||+|||||.|+.|++|+.||+||.+.+|.
T Consensus 62 ----------~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~g~~~vdes~lTGEs~pv~k~~g~~v~aGt~v~~g~ 131 (556)
T TIGR01525 62 ----------GDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGESEVDESALTGESMPVEKKEGDEVFAGTINGDGS 131 (556)
T ss_pred ----------CCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEecceEEeehhccCCCCCEecCCcCEEeeceEECCce
Confidence 6 48999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCch
Q 002770 406 LRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNP 485 (883)
Q Consensus 406 ~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (883)
++++|+++|.+|+++++.+++++++.+++|+|+.+++++.+|++++++++++++++|++.+..
T Consensus 132 ~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~----------------- 194 (556)
T TIGR01525 132 LTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALGAL----------------- 194 (556)
T ss_pred EEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------------
Confidence 999999999999999999999999999999999999999999999999999999988764321
Q ss_pred HHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC-
Q 002770 486 LLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV- 564 (883)
Q Consensus 486 ~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~- 564 (883)
..+.+++++++++|||+|++++|+++..++.+++|+||++|+++++|+++++|++|||||||||+|+|+|.++...+
T Consensus 195 --~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~ 272 (556)
T TIGR01525 195 --GALYRALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDD 272 (556)
T ss_pred --hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999987543
Q ss_pred CC--hHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCCCCc-CcccccCceEEEEECC-EEEEecCHHHHHHHhhccCC
Q 002770 565 YD--ESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITR-GQLAEPGFGILGEVDG-RLVAVGTLEWVYERFQKQGD 640 (883)
Q Consensus 565 ~~--~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~~~~-~~~~~~g~g~~~~~~g-~~~~~Gs~~~i~~~~~~~~~ 640 (883)
.. +++++.+++++|+.+.||+++||++++++.+.+.+. . +..+.+|+|+.+.++| ..+.+|+++++... ..
T Consensus 273 ~~~~~~~~l~~a~~~e~~~~hp~~~Ai~~~~~~~~~~~~~-~~~~~~~~~~gi~~~~~g~~~~~lg~~~~~~~~--~~-- 347 (556)
T TIGR01525 273 ASISEEELLALAAALEQSSSHPLARAIVRYAKKRGLELPK-QEDVEEVPGKGVEATVDGQEEVRIGNPRLLELA--AE-- 347 (556)
T ss_pred CCccHHHHHHHHHHHhccCCChHHHHHHHHHHhcCCCccc-ccCeeEecCCeEEEEECCeeEEEEecHHHHhhc--CC--
Confidence 33 678899999999999999999999999987765433 3 5667889999999999 79999999987211 11
Q ss_pred CchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCC-CEEEEEcCCcHHHHHH
Q 002770 641 HSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKG-IKTLLLSGDREEAVAA 719 (883)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~G-i~v~~lTGd~~~~a~~ 719 (883)
+........ ....+.|.+++++++++. ++|.+.++|+++|+++++|++|+++| ++++|+|||+...+..
T Consensus 348 --~~~~~~~~~-------~~~~~~g~~~~~v~~~~~-~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~ 417 (556)
T TIGR01525 348 --PISASPDLL-------NEGESQGKTVVFVAVDGE-LLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEA 417 (556)
T ss_pred --CchhhHHHH-------HHHhhCCcEEEEEEECCE-EEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHH
Confidence 111111111 123457889999999987 99999999999999999999999999 9999999999999999
Q ss_pred HHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChh
Q 002770 720 TAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLS 799 (883)
Q Consensus 720 ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~ 799 (883)
+++++|++ .+|+++.|++|.++++.+++.++.|+|+|||.||++|++.||+||++ +++++.+++.||+++.++++.
T Consensus 418 i~~~lgi~--~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~--g~~~~~~~~~Ad~vi~~~~~~ 493 (556)
T TIGR01525 418 VAAELGID--EVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM--GAGSDVAIEAADIVLLNDDLS 493 (556)
T ss_pred HHHHhCCC--eeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe--CCCCHHHHHhCCEEEeCCCHH
Confidence 99999996 79999999999999999999999999999999999999999999999 678899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHH-HHHHHhhhhhHHHHHhhhhc
Q 002770 800 QVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPS-LSGGLMALSSIFVVSNSLLL 868 (883)
Q Consensus 800 ~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~-~aa~~m~~ssl~v~~nsl~l 868 (883)
.+++++++||+++++|+||+.|+++||++++|+|++++ ++|+ +|+++|.+||++|++||+|+
T Consensus 494 ~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~-------~~p~~~aa~~m~~ss~~v~lns~r~ 556 (556)
T TIGR01525 494 SLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL-------LPLWLLAVLLHEGSTVLVVLNSLRL 556 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cCHHHHHHHHHhchHHHHHHHhhcC
Confidence 99999999999999999999999999999999998765 6896 99999999999999999986
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=829.73 Aligned_cols=526 Identities=25% Similarity=0.371 Sum_probs=450.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCC
Q 002770 280 EPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPG 359 (883)
Q Consensus 280 ~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~G 359 (883)
++++++++++++..++.+++.|+.+.+++|.++.|++++|+| ||++++|+++||+|||+|.|++|
T Consensus 57 ~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~R---------------dg~~~~I~~~~Lv~GDiV~l~~G 121 (755)
T TIGR01647 57 DFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLR---------------DGKWQEIPASELVPGDVVRLKIG 121 (755)
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEE---------------CCEEEEEEhhhCcCCCEEEECCC
Confidence 355566677788889999999999999999999999999988 89999999999999999999999
Q ss_pred CeeeeeEEEEeec-eEEeeccccCCCceeeccCCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHH
Q 002770 360 ETIPVDGRVLAGR-SVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQR 438 (883)
Q Consensus 360 e~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~ 438 (883)
|+|||||+|++|+ +.||||+|||||.|+.|.+|+.+|+||.+.+|.++++|++||.+|.+|+|.+++++++.+++|+|+
T Consensus 122 d~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~~~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~ 201 (755)
T TIGR01647 122 DIVPADCRLFEGDYIQVDQAALTGESLPVTKKTGDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQK 201 (755)
T ss_pred CEEeceEEEEecCceEEEcccccCCccceEeccCCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHH
Confidence 9999999999998 899999999999999999999999999999999999999999999999999999999989999999
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHH
Q 002770 439 LADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTS 518 (883)
Q Consensus 439 ~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~ 518 (883)
.+++++.++++++++++++.+++|++... .++..++.+++++++++|||+|++++|++++.+..
T Consensus 202 ~~~~i~~~~~~~~~~~~~i~~~~~~~~~~----------------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~ 265 (755)
T TIGR01647 202 ILSKIGLFLIVLIGVLVLIELVVLFFGRG----------------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAA 265 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHH
Confidence 99999999999999888888887765221 22455688899999999999999999999999999
Q ss_pred HHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC--CChHHHHHHHHHh-hhccCChHHHHHHHHHHh
Q 002770 519 LGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV--YDESEILKIAAAV-EKTATHPIAKAIVNKAES 595 (883)
Q Consensus 519 ~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~--~~~~~~l~~~a~~-e~~s~hPi~~Ai~~~~~~ 595 (883)
+++|+|+++|+++++|+||++|++|||||||||+|+|+|.+++..+ +++++++.+++.. +..+.||+++|+++++++
T Consensus 266 r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~~~~~l~~a~~~~~~~~~~pi~~Ai~~~~~~ 345 (755)
T TIGR01647 266 ELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFDKDDVLLYAALASREEDQDAIDTAVLGSAKD 345 (755)
T ss_pred HHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCCHHHHHHHHHHhCCCCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999997653 5677888887755 467889999999998875
Q ss_pred cCC---CCCCCcCccc-ccCceEEEEE----CCE--EEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCC
Q 002770 596 LNL---TSPITRGQLA-EPGFGILGEV----DGR--LVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYS 665 (883)
Q Consensus 596 ~~~---~~~~~~~~~~-~~g~g~~~~~----~g~--~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 665 (883)
.+. ..+....... ..++++...+ +|+ .+.||+++.+.++|..... ...++.+.. ..+..+|
T Consensus 346 ~~~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~--~~~~~~~~~-------~~~~~~G 416 (755)
T TIGR01647 346 LKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKE--IEEKVEEKV-------DELASRG 416 (755)
T ss_pred hHHHHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHH--HHHHHHHHH-------HHHHhCC
Confidence 431 0111111111 2466776666 244 3679999999999864211 111111111 2235679
Q ss_pred CeEEEEEec----CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc------------
Q 002770 666 KSVVYVGRE----GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE------------ 729 (883)
Q Consensus 666 ~~~~~~a~~----~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~------------ 729 (883)
.+++++++. +.+++|+++|+|++|++++++|++||++|++++|+|||++.+|.++|+++||...
T Consensus 417 ~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~ 496 (755)
T TIGR01647 417 YRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDN 496 (755)
T ss_pred CEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcc
Confidence 999999982 3369999999999999999999999999999999999999999999999999641
Q ss_pred ----------------eEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEE
Q 002770 730 ----------------YINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIIL 793 (883)
Q Consensus 730 ----------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl 793 (883)
.+|++++|+||.++|+.||++|+.|+|+|||+||+|||++||||||| ++|+|.++++||+|+
T Consensus 497 ~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm--~~gtdvAkeaADivL 574 (755)
T TIGR01647 497 RDDLPSGELGEMVEDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV--AGATDAARSAADIVL 574 (755)
T ss_pred hhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe--cCCcHHHHHhCCEEE
Confidence 28999999999999999999999999999999999999999999999 689999999999999
Q ss_pred eCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHH
Q 002770 794 LGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPS 848 (883)
Q Consensus 794 ~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~ 848 (883)
++|++..+++++++||++++||+||+.|.++.|+..+.......+ .+++.|+|+
T Consensus 575 l~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l-~~~~~l~~~ 628 (755)
T TIGR01647 575 TEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLIL-ILNFYFPPI 628 (755)
T ss_pred EcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH-HhCcchhHH
Confidence 999999999999999999999999999999999865543322211 134446775
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-87 Score=782.68 Aligned_cols=514 Identities=27% Similarity=0.382 Sum_probs=431.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc-ceEEEEcCCCCCCCCCccccCCCe-EEEeeCCCcCCCCEEEECC
Q 002770 281 PVMLLGFVLLGRSLEERARIRASSDMNELLSLVST-QSRLVITSSESGSSADNVLCSDAI-CVEVPTDDIRVGDSVLVLP 358 (883)
Q Consensus 281 ~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~-~~~v~~~~~~~~~~~~~~~~~dg~-~~~V~~~~l~~GDiV~v~~ 358 (883)
...+++.+++++++|.+++.|+++.+++|+++.|+ +++++| ||. +++||+++|++||+|+|++
T Consensus 69 ~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir---------------~g~~~~~V~~~eL~~GDiV~v~~ 133 (679)
T PRK01122 69 TLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLR---------------EPGAAEEVPATELRKGDIVLVEA 133 (679)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEE---------------CCCEEEEEEHHHcCCCCEEEEcC
Confidence 34556667889999999999999999999999986 688887 555 8999999999999999999
Q ss_pred CCeeeeeEEEEeeceEEeeccccCCCceeeccCCCc---cccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCCh
Q 002770 359 GETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFT---VSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAP 435 (883)
Q Consensus 359 Ge~IPaDg~vl~G~~~Vdes~LTGEs~pv~K~~g~~---v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~ 435 (883)
||+||+||+|++|++.||||+|||||.|+.|++|+. ||+||.|.+|.++++|+++|.+|.++||++++++++.+|+|
T Consensus 134 Gd~IPaDG~vieG~a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp 213 (679)
T PRK01122 134 GEIIPADGEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTP 213 (679)
T ss_pred CCEEEEEEEEEEccEEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCH
Confidence 999999999999999999999999999999999998 99999999999999999999999999999999999999999
Q ss_pred hHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHH
Q 002770 436 IQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILV 515 (883)
Q Consensus 436 ~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~ 515 (883)
+|...+.+..+++.+++++....+.++++.+ .. .++..++++++++|||+++.++|.....
T Consensus 214 ~e~al~~l~~~l~~i~l~~~~~~~~~~~~~g-----------------~~--~~l~~~iallV~aiP~alg~l~~~i~i~ 274 (679)
T PRK01122 214 NEIALTILLAGLTIIFLLVVATLPPFAAYSG-----------------GA--LSITVLVALLVCLIPTTIGGLLSAIGIA 274 (679)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHHhC-----------------ch--HHHHHHHHHHHHcccchhhhHHHHHHHH
Confidence 9988777766655433333222222211111 11 2577889999999999999999999999
Q ss_pred HHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEecc-CCChHHHHHHHHHhhhccCChHHHHHHHHHH
Q 002770 516 GTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASF-VYDESEILKIAAAVEKTATHPIAKAIVNKAE 594 (883)
Q Consensus 516 ~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~-~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~ 594 (883)
++.+++|+|+++|+++++|++|++|++|||||||||+|+|.+.++++. +.++++++..++..+..+.||.++||+++++
T Consensus 275 g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~a~~~s~~s~hP~~~AIv~~a~ 354 (679)
T PRK01122 275 GMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGVTEEELADAAQLSSLADETPEGRSIVVLAK 354 (679)
T ss_pred HHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCCCHHHHHHHHHHhcCCCCCchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998753 5667788999999999999999999999987
Q ss_pred h-cCCCCCC-----CcCcccccCceEEEE-ECCEEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCe
Q 002770 595 S-LNLTSPI-----TRGQLAEPGFGILGE-VDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKS 667 (883)
Q Consensus 595 ~-~~~~~~~-----~~~~~~~~g~g~~~~-~~g~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 667 (883)
+ .+..... .........++.++. ++|+.+.||+++.+.+.|...... ..+++.+..+ ...++|.+
T Consensus 355 ~~~~~~~~~~~~~~~~~~pF~s~~~~~gv~~~g~~~~kGa~e~il~~~~~~g~~-~~~~~~~~~~-------~~a~~G~~ 426 (679)
T PRK01122 355 QRFNLRERDLQSLHATFVPFSAQTRMSGVDLDGREIRKGAVDAIRRYVESNGGH-FPAELDAAVD-------EVARKGGT 426 (679)
T ss_pred hhcCCCchhhccccceeEeecCcCceEEEEECCEEEEECCHHHHHHHHHhcCCc-ChHHHHHHHH-------HHHhCCCc
Confidence 6 3432111 111122222344443 678999999999999888543221 0112222211 23567889
Q ss_pred EEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHH
Q 002770 668 VVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTL 747 (883)
Q Consensus 668 ~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l 747 (883)
++++++++. ++|+++++|++|+|+++++++||++||+++|+|||++.+|.++|+++||+ +++++++||||.++|+.+
T Consensus 427 ~l~va~~~~-~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId--~v~A~~~PedK~~iV~~l 503 (679)
T PRK01122 427 PLVVAEDNR-VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD--DFLAEATPEDKLALIRQE 503 (679)
T ss_pred EEEEEECCe-EEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--EEEccCCHHHHHHHHHHH
Confidence 999998876 99999999999999999999999999999999999999999999999997 799999999999999999
Q ss_pred hhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 748 QTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNV 827 (883)
Q Consensus 748 ~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~ 827 (883)
|++|+.|+|+|||+||+|||++||||||| ++|++.++++||+|+++||+..+++++++||++.-+--.--.|++. |-
T Consensus 504 Q~~G~~VaMtGDGvNDAPALa~ADVGIAM--gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~-n~ 580 (679)
T PRK01122 504 QAEGRLVAMTGDGTNDAPALAQADVGVAM--NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA-ND 580 (679)
T ss_pred HHcCCeEEEECCCcchHHHHHhCCEeEEe--CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH-HH
Confidence 99999999999999999999999999999 7899999999999999999999999999999998554444556654 53
Q ss_pred -----HHHHHHHhhhhcccC
Q 002770 828 -----VAIPIAAGALLPQYD 842 (883)
Q Consensus 828 -----~~i~la~~~~~~~~g 842 (883)
..+|..+...||..+
T Consensus 581 ~~~~~~i~p~~~~~~~~~~~ 600 (679)
T PRK01122 581 VAKYFAIIPAMFAATYPQLN 600 (679)
T ss_pred HHHHHHHHHHHHHhhCcccc
Confidence 455655566677655
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-87 Score=779.08 Aligned_cols=510 Identities=27% Similarity=0.346 Sum_probs=423.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccccc-ceEE-EEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCe
Q 002770 284 LLGFVLLGRSLEERARIRASSDMNELLSLVST-QSRL-VITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGET 361 (883)
Q Consensus 284 ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~-~~~v-~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~ 361 (883)
+++..++|+++|.+++.|+++++++|+++.|+ ++++ .| ||++++||+++|+|||+|.|++||+
T Consensus 72 l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~r---------------dg~~~~I~a~eLv~GDiV~v~~Gd~ 136 (673)
T PRK14010 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQ---------------DGSYEMIDASDLKKGHIVRVATGEQ 136 (673)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEe---------------CCEEEEEEHHHcCCCCEEEECCCCc
Confidence 34445579999999999999999999999986 7764 45 8899999999999999999999999
Q ss_pred eeeeEEEEeeceEEeeccccCCCceeeccCC---CccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHH
Q 002770 362 IPVDGRVLAGRSVVDESMLSGESLPVFKEEG---FTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQR 438 (883)
Q Consensus 362 IPaDg~vl~G~~~Vdes~LTGEs~pv~K~~g---~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~ 438 (883)
||+||+|++|++.||||+|||||.|+.|++| +.||+||.+.+|+++++|+++|.+|+++||++++++++.+|+|+|.
T Consensus 137 IPaDG~vieG~~~VDESaLTGES~PV~K~~g~d~~~V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~ 216 (673)
T PRK14010 137 IPNDGKVIKGLATVDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEI 216 (673)
T ss_pred ccCCeEEEEcceEEecchhcCCCCceeccCCCccCeeecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHH
Confidence 9999999999999999999999999999999 8899999999999999999999999999999999999999999996
Q ss_pred HHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHH
Q 002770 439 LADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTS 518 (883)
Q Consensus 439 ~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~ 518 (883)
..+.+.. .+.+..+++++|++....+ ..+...+...+++++.+|||+|+..+|.+...++.
T Consensus 217 ~l~~l~~-----~l~ii~l~~~~~~~~~~~~--------------~~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~ 277 (673)
T PRK14010 217 ALFTLLM-----TLTIIFLVVILTMYPLAKF--------------LNFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMD 277 (673)
T ss_pred HHHHHHH-----HHhHHHHHHHHHHHHHHhh--------------ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 5544322 2222222233332211000 01223456677788888999999999999999999
Q ss_pred HHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEecc-CCChHHHHHHHHHhhhccCChHHHHHHHHHHhcC
Q 002770 519 LGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASF-VYDESEILKIAAAVEKTATHPIAKAIVNKAESLN 597 (883)
Q Consensus 519 ~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~-~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~ 597 (883)
+++|+|+++|+++++|++|++|++|||||||||+|++.+.++.+. +.+.++++..++.++..+.||+++||++++++.+
T Consensus 278 r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~~~~~~ll~~a~~~~~~s~~P~~~AIv~~a~~~~ 357 (673)
T PRK14010 278 RVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKSSSFERLVKAAYESSIADDTPEGRSIVKLAYKQH 357 (673)
T ss_pred HHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCCccHHHHHHHHHHhcCCCCChHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999888777543 4456678888888888999999999999998876
Q ss_pred CCCCC-CcCc-ccc---cCceEEEEECCEEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEE
Q 002770 598 LTSPI-TRGQ-LAE---PGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVG 672 (883)
Q Consensus 598 ~~~~~-~~~~-~~~---~g~g~~~~~~g~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a 672 (883)
++.+. ..++ ... .+.|+ .++++.+.||+++++.++|....... ..++....+ ...++|.++++++
T Consensus 358 ~~~~~~~~~~~pF~~~~k~~gv--~~~g~~i~kGa~~~il~~~~~~g~~~-~~~~~~~~~-------~~a~~G~~~l~v~ 427 (673)
T PRK14010 358 IDLPQEVGEYIPFTAETRMSGV--KFTTREVYKGAPNSMVKRVKEAGGHI-PVDLDALVK-------GVSKKGGTPLVVL 427 (673)
T ss_pred CCchhhhcceeccccccceeEE--EECCEEEEECCHHHHHHHhhhcCCCC-chHHHHHHH-------HHHhCCCeEEEEE
Confidence 55321 1111 111 13343 36788899999999998887532211 011111111 1345788888888
Q ss_pred ecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCC
Q 002770 673 REGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGH 752 (883)
Q Consensus 673 ~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~ 752 (883)
.++. ++|+++++|++|+|++++|++||++|++++|+|||++.+|.++|+++||+ +++++++||||.++|+.+|++|+
T Consensus 428 ~~~~-~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~--~v~A~~~PedK~~iV~~lQ~~G~ 504 (673)
T PRK14010 428 EDNE-ILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD--RFVAECKPEDKINVIREEQAKGH 504 (673)
T ss_pred ECCE-EEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc--eEEcCCCHHHHHHHHHHHHhCCC
Confidence 7665 99999999999999999999999999999999999999999999999997 79999999999999999999999
Q ss_pred eEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH
Q 002770 753 HVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNV---VA 829 (883)
Q Consensus 753 ~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~---~~ 829 (883)
.|+|+|||+||+|||++||||||| ++|+|.|+++||+|+++||+..|++++++||++|.|+++.+.|.+..|+ ++
T Consensus 505 ~VaMtGDGvNDAPALa~ADVGIAM--gsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~ 582 (673)
T PRK14010 505 IVAMTGDGTNDAPALAEANVGLAM--NSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFA 582 (673)
T ss_pred EEEEECCChhhHHHHHhCCEEEEe--CCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHH
Confidence 999999999999999999999999 7899999999999999999999999999999999999999999999886 33
Q ss_pred HHHH-HhhhhcccC
Q 002770 830 IPIA-AGALLPQYD 842 (883)
Q Consensus 830 i~la-~~~~~~~~g 842 (883)
|..| +...||.++
T Consensus 583 i~~a~~~~~~~~~~ 596 (673)
T PRK14010 583 ILPAMFMAAMPAMN 596 (673)
T ss_pred HHHHHHHHhcccch
Confidence 3333 344556544
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-86 Score=805.89 Aligned_cols=563 Identities=21% Similarity=0.286 Sum_probs=457.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCC
Q 002770 280 EPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPG 359 (883)
Q Consensus 280 ~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~G 359 (883)
.+++++++++++.+++.+++.|+.+++++|.++.|.+++|+|+...+ .+|++++|+++||+|||+|.|++|
T Consensus 124 ~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~---------~~g~~~~I~~~eLvpGDiV~l~~G 194 (902)
T PRK10517 124 AAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDK---------GENGWLEIPIDQLVPGDIIKLAAG 194 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccC---------CCCeEEEEEHHhCCCCCEEEECCC
Confidence 46677778889999999999999999999999999999999821000 027899999999999999999999
Q ss_pred CeeeeeEEEEeec-eEEeeccccCCCceeeccCCC-------------ccccceeeecCcEEEEEEeecCccchhhhhhh
Q 002770 360 ETIPVDGRVLAGR-SVVDESMLSGESLPVFKEEGF-------------TVSAGTINWDGPLRIEACSTGSNSMISKIVSM 425 (883)
Q Consensus 360 e~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~g~-------------~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~ 425 (883)
|+|||||+|++|+ ..||||+|||||.|+.|.+|+ .+|+||.+.+|.++++|++||.+|.+|+|.++
T Consensus 195 d~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~ 274 (902)
T PRK10517 195 DMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGR 274 (902)
T ss_pred CEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHH
Confidence 9999999999997 589999999999999999875 69999999999999999999999999999999
Q ss_pred hHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhccccc
Q 002770 426 VEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCAL 505 (883)
Q Consensus 426 v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL 505 (883)
+++++.+++|+|+.+|+++.+++.++++++.+++++|++.. .++..++.+++++++++|||+|
T Consensus 275 v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~-----------------~~~~~~l~~alsv~V~~~Pe~L 337 (902)
T PRK10517 275 VSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTK-----------------GDWWEAALFALSVAVGLTPEML 337 (902)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhc-----------------CCHHHHHHHHHHHHHHHcccHH
Confidence 99998999999999999999998888887777766654322 1244568889999999999999
Q ss_pred chhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEec-cCCChHHHHHHHHHh---hhcc
Q 002770 506 GLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVAS-FVYDESEILKIAAAV---EKTA 581 (883)
Q Consensus 506 ~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~-~~~~~~~~l~~~a~~---e~~s 581 (883)
+++++++++.+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.++.. .+.+.++++..++.. +...
T Consensus 338 P~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~~~~~~ll~~a~l~~~~~~~~ 417 (902)
T PRK10517 338 PMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISGKTSERVLHSAWLNSHYQTGL 417 (902)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCCCCHHHHHHHHHhcCCcCCCC
Confidence 999999999999999999999999999999999999999999999999999998753 234456677665542 2345
Q ss_pred CChHHHHHHHHHHhcCCC-----CCCCcCccccc-CceEEEEEC---C--EEEEecCHHHHHHHhhccCCCchhhhHHH-
Q 002770 582 THPIAKAIVNKAESLNLT-----SPITRGQLAEP-GFGILGEVD---G--RLVAVGTLEWVYERFQKQGDHSDVQHLEH- 649 (883)
Q Consensus 582 ~hPi~~Ai~~~~~~~~~~-----~~~~~~~~~~~-g~g~~~~~~---g--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~- 649 (883)
.||++.|++.+++..+.. .+........+ .+++...++ + ..+.||+++.+.++|...........+.+
T Consensus 418 ~~p~d~All~~a~~~~~~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 497 (902)
T PRK10517 418 KNLLDTAVLEGVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDI 497 (902)
T ss_pred CCHHHHHHHHHHHhcchhhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHH
Confidence 799999999988754210 11111111111 334443332 2 46899999999999875322111111100
Q ss_pred HHhhhcccccCcCCCCCeEEEEEec---------------CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcH
Q 002770 650 AVTHQSSELASPSNYSKSVVYVGRE---------------GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDRE 714 (883)
Q Consensus 650 ~~~~~~~~~~~~~~~g~~~~~~a~~---------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~ 714 (883)
...++......+..+|.+++++++. +..++|+++|+|++|++++++|++|+++||+++|+|||++
T Consensus 498 ~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~ 577 (902)
T PRK10517 498 MLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSE 577 (902)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 0011111122345678999999862 4579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCc-----------------------eEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCC
Q 002770 715 EAVAATAKEVGIGKE-----------------------YINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD 771 (883)
Q Consensus 715 ~~a~~ia~~~gi~~~-----------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~Ad 771 (883)
.+|.++|+++||+.+ .+|+|++|+||.++|+.||++|+.|+|+|||+||+|||++||
T Consensus 578 ~tA~~IA~~lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~AD 657 (902)
T PRK10517 578 LVAAKVCHEVGLDAGEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAAD 657 (902)
T ss_pred HHHHHHHHHcCCCccCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCC
Confidence 999999999999621 699999999999999999999999999999999999999999
Q ss_pred eeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcccCccccHHHH
Q 002770 772 VGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAA-GALLPQYDFAMTPSLS 850 (883)
Q Consensus 772 vgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~-~~~~~~~g~~l~P~~a 850 (883)
||||| ++|+|.|+++||+|+++||+..|++++++||++++||++++.|.+..|+..+...+ +.++ ++ ..|+.+
T Consensus 658 VGIAm--g~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~--~~--~~pl~~ 731 (902)
T PRK10517 658 IGISV--DGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAF--LP--FLPMLP 731 (902)
T ss_pred EEEEe--CCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH--hh--hhhhHH
Confidence 99999 68999999999999999999999999999999999999999999999985444332 2221 11 236666
Q ss_pred HHHhhhhhHHHHHhhhhcccccccc
Q 002770 851 GGLMALSSIFVVSNSLLLQFHEFES 875 (883)
Q Consensus 851 a~~m~~ssl~v~~nsl~l~~~~~~~ 875 (883)
..+....-+.- +-++.|.+.+++.
T Consensus 732 ~qiL~inl~~D-~~~~al~~d~~~~ 755 (902)
T PRK10517 732 LHLLIQNLLYD-VSQVAIPFDNVDD 755 (902)
T ss_pred HHHHHHHHHHH-HhHHhhcCCCCCh
Confidence 66667666666 3477787765443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-85 Score=799.76 Aligned_cols=563 Identities=23% Similarity=0.295 Sum_probs=454.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCC
Q 002770 280 EPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPG 359 (883)
Q Consensus 280 ~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~G 359 (883)
.+++++++++++.+++.+++.|+++++++|.++.+.+++|+|....+ .||++++|+++||+|||+|.+++|
T Consensus 90 ~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~---------~dg~~~~I~~~eLv~GDiV~l~~G 160 (867)
T TIGR01524 90 ATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINEN---------GNGSMDEVPIDALVPGDLIELAAG 160 (867)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccC---------CCCeEEEEEhhcCCCCCEEEECCC
Confidence 45566667778888999999999999999999999999888721000 058899999999999999999999
Q ss_pred CeeeeeEEEEeec-eEEeeccccCCCceeeccCCC-------------ccccceeeecCcEEEEEEeecCccchhhhhhh
Q 002770 360 ETIPVDGRVLAGR-SVVDESMLSGESLPVFKEEGF-------------TVSAGTINWDGPLRIEACSTGSNSMISKIVSM 425 (883)
Q Consensus 360 e~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~g~-------------~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~ 425 (883)
|+|||||+|++|+ ..||||+|||||.|+.|.+|+ .+|+||.+.+|.++++|++||.+|.+|+|.++
T Consensus 161 d~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~ 240 (867)
T TIGR01524 161 DIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIA 240 (867)
T ss_pred CEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHH
Confidence 9999999999997 589999999999999999875 59999999999999999999999999999999
Q ss_pred hHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhccccc
Q 002770 426 VEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCAL 505 (883)
Q Consensus 426 v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL 505 (883)
+++ +.+++|+|+.+|+++.++.+++++++.+++++|++.. .++..++.+++++++++|||+|
T Consensus 241 v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~-----------------~~~~~~~~~al~l~v~~iP~~L 302 (867)
T TIGR01524 241 ATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMK-----------------GDWLEAFLFALAVAVGLTPEML 302 (867)
T ss_pred hhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhc-----------------CCHHHHHHHHHHHHHHhCcchH
Confidence 988 7778999999999999999988888877776664322 1244568889999999999999
Q ss_pred chhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEecc-CCChHHHHHHHHH---hhhcc
Q 002770 506 GLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASF-VYDESEILKIAAA---VEKTA 581 (883)
Q Consensus 506 ~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~-~~~~~~~l~~~a~---~e~~s 581 (883)
+++++++++.+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.++... +.+.++++..++. .+..+
T Consensus 303 p~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~~~~~~l~~a~l~~~~~~~~ 382 (867)
T TIGR01524 303 PMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGETSERVLKMAWLNSYFQTGW 382 (867)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCCCHHHHHHHHHHhCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999998643 3345667766653 22345
Q ss_pred CChHHHHHHHHHHhcCCCC--CCCcCccccc----CceEEEEECC-----EEEEecCHHHHHHHhhccCCCchhhhHHH-
Q 002770 582 THPIAKAIVNKAESLNLTS--PITRGQLAEP----GFGILGEVDG-----RLVAVGTLEWVYERFQKQGDHSDVQHLEH- 649 (883)
Q Consensus 582 ~hPi~~Ai~~~~~~~~~~~--~~~~~~~~~~----g~g~~~~~~g-----~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~- 649 (883)
.||+++|+++++.+..... .........| ++++...+++ ..+.||+++.+.++|...........+.+
T Consensus 383 ~~p~~~Al~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~ 462 (867)
T TIGR01524 383 KNVLDHAVLAKLDESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSES 462 (867)
T ss_pred CChHHHHHHHHHHhhchhhHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHH
Confidence 7999999999887532110 0001111122 4566555432 46899999999998864322111100000
Q ss_pred HHhhhcccccCcCCCCCeEEEEEec---------------CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcH
Q 002770 650 AVTHQSSELASPSNYSKSVVYVGRE---------------GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDRE 714 (883)
Q Consensus 650 ~~~~~~~~~~~~~~~g~~~~~~a~~---------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~ 714 (883)
...++.+....+..+|.+++++++. +.+++|+++|+|++|++++++|++||++||+++|+|||+.
T Consensus 463 ~~~~i~~~~~~~a~~G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~ 542 (867)
T TIGR01524 463 EKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNE 542 (867)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCH
Confidence 0001111122346688999999871 2369999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCc-----------------------eEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCC
Q 002770 715 EAVAATAKEVGIGKE-----------------------YINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD 771 (883)
Q Consensus 715 ~~a~~ia~~~gi~~~-----------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~Ad 771 (883)
.+|.++|+++||..+ .+|+|++|+||.++|+.||++|+.|+|+|||+||+|||++||
T Consensus 543 ~tA~aIA~~lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~Ad 622 (867)
T TIGR01524 543 IVTARICQEVGIDANDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKAD 622 (867)
T ss_pred HHHHHHHHHcCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCC
Confidence 999999999999621 799999999999999999999999999999999999999999
Q ss_pred eeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcccCccccHHHH
Q 002770 772 VGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAA-GALLPQYDFAMTPSLS 850 (883)
Q Consensus 772 vgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~-~~~~~~~g~~l~P~~a 850 (883)
||||| ++|+|.++++||+|+++||++.|++++++||++++||+||+.|.+..|+..+...+ +.++ + ...|+.+
T Consensus 623 VGIAm--g~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~--~--~~~pl~~ 696 (867)
T TIGR01524 623 VGISV--DTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF--I--PFLPMLS 696 (867)
T ss_pred EEEEe--CCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH--h--hhhhHHH
Confidence 99999 68999999999999999999999999999999999999999999988764433222 2221 1 1246666
Q ss_pred HHHhhhhhHHHHHhhhhccccccccc
Q 002770 851 GGLMALSSIFVVSNSLLLQFHEFESN 876 (883)
Q Consensus 851 a~~m~~ssl~v~~nsl~l~~~~~~~~ 876 (883)
..+..+.-+.- +-++.|.+.+++.+
T Consensus 697 ~qil~inl~~d-~~~~al~~~~~~~~ 721 (867)
T TIGR01524 697 LHLLIQNLLYD-FSQLTLPWDKMDRE 721 (867)
T ss_pred HHHHHHHHHHH-HHHHhhcCCCCChH
Confidence 66666666666 46788877655443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-84 Score=754.42 Aligned_cols=521 Identities=28% Similarity=0.404 Sum_probs=435.4
Q ss_pred cchhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-eEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCC
Q 002770 276 SFFEEPVM--LLGFVLLGRSLEERARIRASSDMNELLSLVSTQ-SRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGD 352 (883)
Q Consensus 276 ~~f~~~~~--ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GD 352 (883)
.||+..+. +++.+++++++|.+++.|+++.+++|.++.|++ +++++. ||++++|++++|++||
T Consensus 63 ~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~--------------dg~~~~V~~~~L~~GD 128 (675)
T TIGR01497 63 ALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRD--------------DGAIDKVPADQLKKGD 128 (675)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEee--------------CCEEEEEEHHHCCCCC
Confidence 46655433 344478999999999999999999999999875 777641 7889999999999999
Q ss_pred EEEECCCCeeeeeEEEEeeceEEeeccccCCCceeeccCCCc---cccceeeecCcEEEEEEeecCccchhhhhhhhHhh
Q 002770 353 SVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFT---VSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEA 429 (883)
Q Consensus 353 iV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGEs~pv~K~~g~~---v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~ 429 (883)
+|.|++||+||+||+|++|++.||||+|||||.||.|++|+. |++||.|.+|.++++|+++|.+|+++||+++++++
T Consensus 129 iV~V~~Gd~IPaDG~vieG~~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a 208 (675)
T TIGR01497 129 IVLVEAGDVIPCDGEVIEGVASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANPGETFLDRMIALVEGA 208 (675)
T ss_pred EEEECCCCEEeeeEEEEEccEEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999985 99999999999999999999999999999999999
Q ss_pred hCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhH
Q 002770 430 QGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLAT 509 (883)
Q Consensus 430 ~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~ 509 (883)
+.+|+|+|...+.+..++.. +++++. +.+|.+.... +. ..++..++++++++|||+++...
T Consensus 209 ~~~ktplq~~l~~l~~~l~~-v~li~~--~~~~~~~~~~--------------~~--~~~~~~lvallV~aiP~aLg~l~ 269 (675)
T TIGR01497 209 QRRKTPNEIALTILLIALTL-VFLLVT--ATLWPFAAYG--------------GN--AISVTVLVALLVCLIPTTIGGLL 269 (675)
T ss_pred ccCCChHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHhc--------------Ch--hHHHHHHHHHHHHhCchhhhhHH
Confidence 99999999877766544433 332222 2223221100 01 12466779999999999999888
Q ss_pred HHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEecc-CCChHHHHHHHHHhhhccCChHHHH
Q 002770 510 PTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASF-VYDESEILKIAAAVEKTATHPIAKA 588 (883)
Q Consensus 510 p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~-~~~~~~~l~~~a~~e~~s~hPi~~A 588 (883)
|.....++.+++|+|+++|+++++|++|++|++|||||||||+|+|++.++++. +.++++++..++..+..++||.++|
T Consensus 270 ~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~~~~~ll~~aa~~~~~s~hP~a~A 349 (675)
T TIGR01497 270 SAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGVDEKTLADAAQLASLADDTPEGKS 349 (675)
T ss_pred HHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCCcHHHHHHHHHHhcCCCCCcHHHH
Confidence 888889999999999999999999999999999999999999999999998753 5567889999999999999999999
Q ss_pred HHHHHHhcCCCCCC----CcCcccccCc-eEEEE--ECCEEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCc
Q 002770 589 IVNKAESLNLTSPI----TRGQLAEPGF-GILGE--VDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASP 661 (883)
Q Consensus 589 i~~~~~~~~~~~~~----~~~~~~~~g~-g~~~~--~~g~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (883)
+++++++.+..... ..++...++. ++++. .+|+.+.||+++++.+.+...... ...++.+... ..
T Consensus 350 iv~~a~~~~~~~~~~~~~~~~~~pf~~~~~~sg~~~~~g~~~~kGa~e~i~~~~~~~g~~-~~~~~~~~~~-------~~ 421 (675)
T TIGR01497 350 IVILAKQLGIREDDVQSLHATFVEFTAQTRMSGINLDNGRMIRKGAVDAIKRHVEANGGH-IPTDLDQAVD-------QV 421 (675)
T ss_pred HHHHHHHcCCCccccccccceEEEEcCCCcEEEEEEeCCeEEEECCHHHHHHHHHhcCCC-CcHHHHHHHH-------HH
Confidence 99999887654321 1122333333 56554 478999999999998877532211 0111222221 23
Q ss_pred CCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchH
Q 002770 662 SNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKS 741 (883)
Q Consensus 662 ~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~ 741 (883)
.++|.+++++++++. ++|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++||+ +++++++|+||.
T Consensus 422 a~~G~r~l~va~~~~-~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~--~v~a~~~PedK~ 498 (675)
T TIGR01497 422 ARQGGTPLVVCEDNR-IYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD--DFIAEATPEDKI 498 (675)
T ss_pred HhCCCeEEEEEECCE-EEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--EEEcCCCHHHHH
Confidence 567899999999876 99999999999999999999999999999999999999999999999997 799999999999
Q ss_pred HHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHH
Q 002770 742 EVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSW 821 (883)
Q Consensus 742 ~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~ 821 (883)
++|+.+|++|+.|+|+|||.||+|||++||||||| +++++.++++||+++++||+..+++++++||+++-+...-..|
T Consensus 499 ~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm--~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~ 576 (675)
T TIGR01497 499 ALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAM--NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTF 576 (675)
T ss_pred HHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEe--CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999999999999999999 7899999999999999999999999999999999988888888
Q ss_pred HHHHHH----HHHHHHHhhhhcccC
Q 002770 822 AVAYNV----VAIPIAAGALLPQYD 842 (883)
Q Consensus 822 a~~~n~----~~i~la~~~~~~~~g 842 (883)
++.-++ ..+|..+...||.++
T Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (675)
T TIGR01497 577 SIANDVAKYFAIIPAIFAAAYPQLQ 601 (675)
T ss_pred eecccHHHHHHHHHHHHHhhCcchh
Confidence 876554 345555555566544
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-84 Score=791.91 Aligned_cols=564 Identities=22% Similarity=0.307 Sum_probs=448.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECC
Q 002770 279 EEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLP 358 (883)
Q Consensus 279 ~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~ 358 (883)
..+++++++++++.+++.+++.|+.+++++|.++.|.+++|+|+...+ .+|++++||++||+|||+|.|++
T Consensus 112 ~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~---------~~g~~~~I~~~eLv~GDiV~l~~ 182 (903)
T PRK15122 112 TGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAG---------AEPVRREIPMRELVPGDIVHLSA 182 (903)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccC---------CCCeEEEEEHHHCCCCCEEEECC
Confidence 345666677888899999999999999999999999999999821000 02688999999999999999999
Q ss_pred CCeeeeeEEEEeec-eEEeeccccCCCceeeccC-----------------------CCccccceeeecCcEEEEEEeec
Q 002770 359 GETIPVDGRVLAGR-SVVDESMLSGESLPVFKEE-----------------------GFTVSAGTINWDGPLRIEACSTG 414 (883)
Q Consensus 359 Ge~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~-----------------------g~~v~aGt~~~~G~~~~~v~~~g 414 (883)
||+|||||+|++|+ ..||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|++||
T Consensus 183 Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~atG 262 (903)
T PRK15122 183 GDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATG 262 (903)
T ss_pred CCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEec
Confidence 99999999999997 4799999999999999975 26799999999999999999999
Q ss_pred CccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHH
Q 002770 415 SNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSV 494 (883)
Q Consensus 415 ~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 494 (883)
.+|.+|+|.+++++ ...++|+|+.++++..++..+.+.++.+++++.++. ...+..++.+++
T Consensus 263 ~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~-----------------~~~~~~~l~~ai 324 (903)
T PRK15122 263 SRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT-----------------KGDWLEALLFAL 324 (903)
T ss_pred cccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-----------------cCCHHHHHHHHH
Confidence 99999999999987 566789999999998877666555544444332211 123456788899
Q ss_pred HHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEecc-CCChHHHHHH
Q 002770 495 DVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASF-VYDESEILKI 573 (883)
Q Consensus 495 ~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~-~~~~~~~l~~ 573 (883)
++++++|||+|+++++++++.+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.+++.. +.++++++.+
T Consensus 325 sl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~~~~~~l~~ 404 (903)
T PRK15122 325 AVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGRKDERVLQL 404 (903)
T ss_pred HHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCCChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998653 3345567766
Q ss_pred HHHh---hhccCChHHHHHHHHHHhcCCCCC--CCcCcccccCc---eEEEEE----CC--EEEEecCHHHHHHHhhccC
Q 002770 574 AAAV---EKTATHPIAKAIVNKAESLNLTSP--ITRGQLAEPGF---GILGEV----DG--RLVAVGTLEWVYERFQKQG 639 (883)
Q Consensus 574 ~a~~---e~~s~hPi~~Ai~~~~~~~~~~~~--~~~~~~~~~g~---g~~~~~----~g--~~~~~Gs~~~i~~~~~~~~ 639 (883)
++.. +..+.||+++|+++++.+.+.... ......+.|+. +..+.+ ++ ..+.||+++.++++|....
T Consensus 405 a~l~s~~~~~~~~p~e~All~~a~~~~~~~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~ 484 (903)
T PRK15122 405 AWLNSFHQSGMKNLMDQAVVAFAEGNPEIVKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR 484 (903)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHHcCchhhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh
Confidence 5432 344679999999999987654211 11122333332 222221 33 3567899999999987532
Q ss_pred CCchhhhHHH-HHhhhcccccCcCCCCCeEEEEEec-----------------CceEEEEEEecCCCChhHHHHHHHHHH
Q 002770 640 DHSDVQHLEH-AVTHQSSELASPSNYSKSVVYVGRE-----------------GEGIIGAIAISDSLRHDAEHTVRSLQQ 701 (883)
Q Consensus 640 ~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~a~~-----------------~~~~lG~i~l~D~lr~~~~~~i~~L~~ 701 (883)
.......+.. ..+++.+....+..+|.+++++++. +..++|+++|+|++|++++++|++||+
T Consensus 485 ~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~ 564 (903)
T PRK15122 485 DGDTVRPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRE 564 (903)
T ss_pred cCCCeecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHH
Confidence 2111101100 0011111122346688999998851 347999999999999999999999999
Q ss_pred CCCEEEEEcCCcHHHHHHHHHHcCCCC-----------------------ceEEEecCccchHHHHHHHhhcCCeEEEEc
Q 002770 702 KGIKTLLLSGDREEAVAATAKEVGIGK-----------------------EYINSSLTPQQKSEVISTLQTSGHHVAMVG 758 (883)
Q Consensus 702 ~Gi~v~~lTGd~~~~a~~ia~~~gi~~-----------------------~~v~~~~~p~~K~~~v~~l~~~g~~v~~vG 758 (883)
+||+++|+|||++.+|.++|+++||.. ..+|+|++|+||.++|+.||++|+.|+|+|
T Consensus 565 aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtG 644 (903)
T PRK15122 565 NGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLG 644 (903)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEEC
Confidence 999999999999999999999999952 169999999999999999999999999999
Q ss_pred CCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhh
Q 002770 759 DGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAA-GAL 837 (883)
Q Consensus 759 Dg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~-~~~ 837 (883)
||+||+|||++||||||| ++|+|.|+++||+|+++||+..|++++++||++++||++++.|.+..|+..+...+ +.+
T Consensus 645 DGvNDaPALk~ADVGIAm--g~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~ 722 (903)
T PRK15122 645 DGINDAPALRDADVGISV--DSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASA 722 (903)
T ss_pred CCchhHHHHHhCCEEEEe--CcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 999999999999999999 68999999999999999999999999999999999999999999999874433322 222
Q ss_pred hcccCccccHHHHHHHhhhhhHHHHHhhhhccccccccc
Q 002770 838 LPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESN 876 (883)
Q Consensus 838 ~~~~g~~l~P~~aa~~m~~ssl~v~~nsl~l~~~~~~~~ 876 (883)
+ + ...|+.+..+....-+.-. -++.|.+.+++++
T Consensus 723 ~--~--~~~pl~~~qil~~nli~D~-~~lal~~d~~~~~ 756 (903)
T PRK15122 723 F--I--PFLPMLAIHLLLQNLMYDI-SQLSLPWDKMDKE 756 (903)
T ss_pred H--h--ccchhHHHHHHHHHHHHHH-HHHhhcCCCCCHh
Confidence 1 1 1246666666666666664 5788877755544
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-82 Score=788.48 Aligned_cols=574 Identities=22% Similarity=0.268 Sum_probs=448.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-cccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEE
Q 002770 276 SFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSL-VSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSV 354 (883)
Q Consensus 276 ~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~-~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV 354 (883)
.|++..+ +++.+++.-.+...+..++++.+++|.+. .+.+++|+| ||++++|+++||+|||+|
T Consensus 127 ~~~~~~~-il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViR---------------dG~~~~I~~~~Lv~GDiV 190 (941)
T TIGR01517 127 GWIEGVA-ILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIR---------------GGQEQQISIHDIVVGDIV 190 (941)
T ss_pred chHHHHH-HHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEE---------------CCEEEEEeHHHCCCCCEE
Confidence 3444333 33333333344445555556666666553 467888888 899999999999999999
Q ss_pred EECCCCeeeeeEEEEee-ceEEeeccccCCCceeeccCCCc--cccceeeecCcEEEEEEeecCccchhhhhhhhHhhhC
Q 002770 355 LVLPGETIPVDGRVLAG-RSVVDESMLSGESLPVFKEEGFT--VSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQG 431 (883)
Q Consensus 355 ~v~~Ge~IPaDg~vl~G-~~~Vdes~LTGEs~pv~K~~g~~--v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~ 431 (883)
.|++||+|||||+|++| ++.||||+|||||.|+.|.+|+. +|+||.+.+|.++++|++||.+|.+|||++++++++
T Consensus 191 ~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~- 269 (941)
T TIGR01517 191 SLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG- 269 (941)
T ss_pred EECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC-
Confidence 99999999999999999 79999999999999999999887 999999999999999999999999999999998865
Q ss_pred CCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcC-cccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHH
Q 002770 432 REAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQ-IFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATP 510 (883)
Q Consensus 432 ~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p 510 (883)
+++|+|+.+++++.++.+++++++++.+++|++.... ....-. .+ ....+..+...+.+++++++++|||+|++++|
T Consensus 270 ~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vt 347 (941)
T TIGR01517 270 EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDG-RD-TEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVT 347 (941)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc-cc-cchhhHHHHHHHHHHHHHHHhhCCCchHHHHH
Confidence 5679999999999999998888888888776432100 000000 00 00012345667889999999999999999999
Q ss_pred HHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC--CCh-----------HHHHHHHHHh
Q 002770 511 TAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV--YDE-----------SEILKIAAAV 577 (883)
Q Consensus 511 ~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~--~~~-----------~~~l~~~a~~ 577 (883)
++++.++.+++|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+ ++. .+++..++..
T Consensus 348 i~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (941)
T TIGR01517 348 IALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHVRNILVEGISL 427 (941)
T ss_pred HHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999886532 110 1223222222
Q ss_pred hh-------------ccCChHHHHHHHHHHhcCCCCC-------CCcCccccc---CceEEEEECC---EEEEecCHHHH
Q 002770 578 EK-------------TATHPIAKAIVNKAESLNLTSP-------ITRGQLAEP---GFGILGEVDG---RLVAVGTLEWV 631 (883)
Q Consensus 578 e~-------------~s~hPi~~Ai~~~~~~~~~~~~-------~~~~~~~~~---g~g~~~~~~g---~~~~~Gs~~~i 631 (883)
+. ...+|++.|+++++++.+.+.. ........+ +.++....++ ..+.||+++.+
T Consensus 428 ~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~i 507 (941)
T TIGR01517 428 NSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIV 507 (941)
T ss_pred CCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHH
Confidence 11 2357889999999887654321 111112222 3344444332 46799999999
Q ss_pred HHHhhccCC----CchhhhHHHHHhhhcccccCcCCCCCeEEEEEec---------------CceEEEEEEecCCCChhH
Q 002770 632 YERFQKQGD----HSDVQHLEHAVTHQSSELASPSNYSKSVVYVGRE---------------GEGIIGAIAISDSLRHDA 692 (883)
Q Consensus 632 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~---------------~~~~lG~i~l~D~lr~~~ 692 (883)
..+|..... .....+..+.+ .+....+..+|.+++++++. ++.++|+++|+|++|+++
T Consensus 508 l~~c~~~~~~~g~~~~~~~~~~~i---~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~ 584 (941)
T TIGR01517 508 LKPCRKRLDSNGEATPISDDKDRC---ADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGV 584 (941)
T ss_pred HHhhhHHhhcCCCcccCcHHHHHH---HHHHHHHHhcCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhH
Confidence 999865211 00111111111 11122346688999988862 347999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC-------------------------ceEEEecCccchHHHHHHH
Q 002770 693 EHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK-------------------------EYINSSLTPQQKSEVISTL 747 (883)
Q Consensus 693 ~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~-------------------------~~v~~~~~p~~K~~~v~~l 747 (883)
+++|++||++|++++|+|||+..+|.++|+++||.+ ..+|+|++|+||.++|+.|
T Consensus 585 ~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~l 664 (941)
T TIGR01517 585 REAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLML 664 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHH
Confidence 999999999999999999999999999999999963 1699999999999999999
Q ss_pred hhcCCeEEEEcCCccCHHHHHhCCeeEEeecC-CccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 748 QTSGHHVAMVGDGINDAPSLALADVGIALQIE-AQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYN 826 (883)
Q Consensus 748 ~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~-~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n 826 (883)
|++|+.|+|+|||+||+|||++||||||| + +|+|.|+++||+++++|++..|++++++||+++++|+||+.|+++||
T Consensus 665 q~~g~vVam~GDGvNDapALk~AdVGIAm--g~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n 742 (941)
T TIGR01517 665 KDMGEVVAVTGDGTNDAPALKLADVGFSM--GISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVN 742 (941)
T ss_pred HHCCCEEEEECCCCchHHHHHhCCcceec--CCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 6 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCccccHHHHHHHhhhhhHHHHHhhhhccccccccc
Q 002770 827 VVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESN 876 (883)
Q Consensus 827 ~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~~nsl~l~~~~~~~~ 876 (883)
+..+++++.+.+ ++. ..|+.+..+..++-+...+.++.|.+.+++.+
T Consensus 743 ~~~i~~~~~~~~--~~~-~~pl~~~qil~inl~~d~~~al~l~~e~~~~~ 789 (941)
T TIGR01517 743 VVAVILTFVGSC--ISS-TSPLTAVQLLWVNLIMDTLAALALATEPPTEA 789 (941)
T ss_pred HHHHHHHHHHHH--Hhc-cccHHHHHHHHHHHHHHHhhHHHHccCCccHH
Confidence 998888764332 121 24666667777788888888888876655433
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-82 Score=778.15 Aligned_cols=549 Identities=21% Similarity=0.300 Sum_probs=444.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEE
Q 002770 289 LLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRV 368 (883)
Q Consensus 289 ~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~v 368 (883)
++.-.+..+++.|+.+.+++|.++.|.+++|+| ||++++|+++||+|||+|.|++||+|||||+|
T Consensus 91 ~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViR---------------dg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~i 155 (884)
T TIGR01522 91 LIVVTVGFVQEYRSEKSLEALNKLVPPECHLIR---------------EGKLEHVLASTLVPGDLVCLSVGDRVPADLRI 155 (884)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE---------------CCEEEEEEHHHCccCCEEEecCCCEEeeeEEE
Confidence 333345555566778889999999999999988 89999999999999999999999999999999
Q ss_pred Eeec-eEEeeccccCCCceeeccCCC--------------ccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCC
Q 002770 369 LAGR-SVVDESMLSGESLPVFKEEGF--------------TVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGRE 433 (883)
Q Consensus 369 l~G~-~~Vdes~LTGEs~pv~K~~g~--------------~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~ 433 (883)
++|+ +.||||+|||||.|+.|.+|+ .+|+||.+.+|.++++|++||.+|.+|+|.+++++++..+
T Consensus 156 i~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~~~~~k 235 (884)
T TIGR01522 156 VEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKPK 235 (884)
T ss_pred EEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhccCCCCC
Confidence 9995 899999999999999999874 7999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHH
Q 002770 434 APIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAI 513 (883)
Q Consensus 434 ~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~ 513 (883)
+|+|+.+|+++.++++++++++++.++++++.+ ..+...+.+++++++++|||+|++++|+++
T Consensus 236 t~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l 298 (884)
T TIGR01522 236 TPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG-----------------KDWLEMFTISVSLAVAAIPEGLPIIVTVTL 298 (884)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------CCHHHHHHHHHHHHHHHccchHHHHHHHHH
Confidence 999999999999998877665555544433221 124456888999999999999999999999
Q ss_pred HHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccCCC---------------------------
Q 002770 514 LVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYD--------------------------- 566 (883)
Q Consensus 514 ~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~~~--------------------------- 566 (883)
..+..+++|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..
T Consensus 299 ~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (884)
T TIGR01522 299 ALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYT 378 (884)
T ss_pred HHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCcccccccccccccC
Confidence 99999999999999999999999999999999999999999999998643200
Q ss_pred --hHHHHHHHHHhhhc---------cCChHHHHHHHHHHhcCCCCC-----CCcCcccccCceEEEE---E--CC--EEE
Q 002770 567 --ESEILKIAAAVEKT---------ATHPIAKAIVNKAESLNLTSP-----ITRGQLAEPGFGILGE---V--DG--RLV 623 (883)
Q Consensus 567 --~~~~l~~~a~~e~~---------s~hPi~~Ai~~~~~~~~~~~~-----~~~~~~~~~g~g~~~~---~--~g--~~~ 623 (883)
..+++..++..... ..+|+++|++++++..++... ........+.+..++. . ++ ..+
T Consensus 379 ~~~~~~l~~~~l~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~ 458 (884)
T TIGR01522 379 VAVSRILEAGNLCNNAKFRNEADTLLGNPTDVALIELLMKFGLDDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCF 458 (884)
T ss_pred HHHHHHHHHHhhhCCCeecCCCCCcCCChHHHHHHHHHHHcCcHhHHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEE
Confidence 02334333322211 135999999999987665311 1112222222322222 1 33 467
Q ss_pred EecCHHHHHHHhhccCCC----chhh-hHHHHHhhhcccccCcCCCCCeEEEEEecC----ceEEEEEEecCCCChhHHH
Q 002770 624 AVGTLEWVYERFQKQGDH----SDVQ-HLEHAVTHQSSELASPSNYSKSVVYVGREG----EGIIGAIAISDSLRHDAEH 694 (883)
Q Consensus 624 ~~Gs~~~i~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~----~~~lG~i~l~D~lr~~~~~ 694 (883)
.||++|.+..+|...... ..+. +..+.+ .+....+..+|.+++++++++ .+++|+++++|++|+++++
T Consensus 459 ~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i---~~~~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~ 535 (884)
T TIGR01522 459 MKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVI---QEEAAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKE 535 (884)
T ss_pred EeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHH---HHHHHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHH
Confidence 899999999998653211 0111 111111 111223466899999999865 3699999999999999999
Q ss_pred HHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc-------------------------eEEEecCccchHHHHHHHhh
Q 002770 695 TVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE-------------------------YINSSLTPQQKSEVISTLQT 749 (883)
Q Consensus 695 ~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~-------------------------~v~~~~~p~~K~~~v~~l~~ 749 (883)
+|++||++|++++|+|||+..+|.++|+++||... .+|+|++|+||.++|+.||+
T Consensus 536 ~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~ 615 (884)
T TIGR01522 536 AVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQK 615 (884)
T ss_pred HHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999631 59999999999999999999
Q ss_pred cCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 750 SGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVA 829 (883)
Q Consensus 750 ~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~ 829 (883)
.|+.|+|+|||.||+|||++|||||+|| .++++.++++||+++++|++..+++++++||++++||++|+.|.++.|+..
T Consensus 616 ~g~~v~mvGDGvND~pAl~~AdVGia~g-~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~ 694 (884)
T TIGR01522 616 RGDVVAMTGDGVNDAPALKLADIGVAMG-QTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAA 694 (884)
T ss_pred CCCEEEEECCCcccHHHHHhCCeeEecC-CCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHH
Confidence 9999999999999999999999999993 268999999999999999999999999999999999999999999999877
Q ss_pred HHHHHhhhhcccCccccHHHHHHHhhhhhHHHHHhhhhccccccccc
Q 002770 830 IPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFESN 876 (883)
Q Consensus 830 i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~~nsl~l~~~~~~~~ 876 (883)
+.+.+... .++. ..|+.+..+..+.-+...+-++.|.+.+++.+
T Consensus 695 ~~~~~~~~--~~~~-~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~ 738 (884)
T TIGR01522 695 LSLIALAT--LMGF-PNPLNAMQILWINILMDGPPAQSLGVEPVDKD 738 (884)
T ss_pred HHHHHHHH--HHcC-CCchhHHHHHHHHHHHHhhHHHHhccCCCChh
Confidence 76644222 1332 35666667778888888888888887655443
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-80 Score=699.67 Aligned_cols=568 Identities=24% Similarity=0.336 Sum_probs=442.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEEC
Q 002770 278 FEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVL 357 (883)
Q Consensus 278 f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~ 357 (883)
|+++..|.+++.+.-.+-.+++.|+.+++++|+++.|+.++++| +|+.+.++++||+|||||.++
T Consensus 78 ~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R---------------~gk~~~i~A~eLVPGDiV~l~ 142 (972)
T KOG0202|consen 78 FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLR---------------SGKLQHILARELVPGDIVELK 142 (972)
T ss_pred cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEe---------------cCcccceehhccCCCCEEEEe
Confidence 44555554444444445556666788899999999999999999 788999999999999999999
Q ss_pred CCCeeeeeEEEEeec-eEEeeccccCCCceeeccC--------------CCccccceeeecCcEEEEEEeecCccchhhh
Q 002770 358 PGETIPVDGRVLAGR-SVVDESMLSGESLPVFKEE--------------GFTVSAGTINWDGPLRIEACSTGSNSMISKI 422 (883)
Q Consensus 358 ~Ge~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~--------------g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i 422 (883)
-||+||||.++++-. ..||||.|||||.|+.|.. .+.+|+||.+..|.+++.|+.||.+|.+|+|
T Consensus 143 vGDkVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I 222 (972)
T KOG0202|consen 143 VGDKIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKI 222 (972)
T ss_pred cCCccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHH
Confidence 999999999999875 5699999999999999943 2358999999999999999999999999999
Q ss_pred hhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHH-HhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhc
Q 002770 423 VSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYY-IGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSC 501 (883)
Q Consensus 423 ~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~ 501 (883)
.++++..+..|+|+|+..|++...+..++.++.+.+ |.+ ++....| ...+.+.......|.+++++.+.++
T Consensus 223 ~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v---~~~nig~f~~p-----~~~g~~fk~~~~~f~IaVsLAVAAI 294 (972)
T KOG0202|consen 223 FKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGV---WLLNIGHFLDP-----VHGGSWFKGALYYFKIAVSLAVAAI 294 (972)
T ss_pred HHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhH---HHhhhhhhccc-----cccccchhchhhhhhHHHHHHHHhc
Confidence 999999999999999999999999886555554444 333 2211111 1112233445567889999999999
Q ss_pred ccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC---------------CC
Q 002770 502 PCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV---------------YD 566 (883)
Q Consensus 502 P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~---------------~~ 566 (883)
|.+|+..+.++++.|+.+|+|++.++|+..++|+||.+++||+|||||||+|+|.+.+++..+ |+
T Consensus 295 PEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~ 374 (972)
T KOG0202|consen 295 PEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYS 374 (972)
T ss_pred cCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeC
Confidence 999999999999999999999999999999999999999999999999999999999986531 10
Q ss_pred h------------------H---HHHHHHHH-----hhhc-------cCChHHHHHHHHHHhcCCCCCC--Cc-------
Q 002770 567 E------------------S---EILKIAAA-----VEKT-------ATHPIAKAIVNKAESLNLTSPI--TR------- 604 (883)
Q Consensus 567 ~------------------~---~~l~~~a~-----~e~~-------s~hPi~~Ai~~~~~~~~~~~~~--~~------- 604 (883)
+ + +++..++. +++. ...|.+.|+...+++.++.... ..
T Consensus 375 ~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~~~~~~ 454 (972)
T KOG0202|consen 375 PEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSNEEASA 454 (972)
T ss_pred CCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhccccccccc
Confidence 0 1 22222221 2211 4579999999999988765322 11
Q ss_pred -------------CcccccCceEEEEE-----C---CEEEEecCHHHHHHHhhccCCCch--hhhHHHHH-hhhcccccC
Q 002770 605 -------------GQLAEPGFGILGEV-----D---GRLVAVGTLEWVYERFQKQGDHSD--VQHLEHAV-THQSSELAS 660 (883)
Q Consensus 605 -------------~~~~~~g~g~~~~~-----~---g~~~~~Gs~~~i~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~ 660 (883)
+.+....+..++.. + ...+.||++|.++++|........ ...+.+.. ..+.++...
T Consensus 455 c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~ 534 (972)
T KOG0202|consen 455 CNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYE 534 (972)
T ss_pred chhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHH
Confidence 11111222222221 1 367899999999999954333221 01111111 111222334
Q ss_pred cCCCCCeEEEEEec-----------------------CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHH
Q 002770 661 PSNYSKSVVYVGRE-----------------------GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAV 717 (883)
Q Consensus 661 ~~~~g~~~~~~a~~-----------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a 717 (883)
+...|.|++.+|.. ++.|+|++++.||+|++++++|+.|+++||+|+|+|||+..||
T Consensus 535 ~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA 614 (972)
T KOG0202|consen 535 MGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETA 614 (972)
T ss_pred HhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHH
Confidence 56789999998874 5679999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCC-----------------------------ceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHH
Q 002770 718 AATAKEVGIGK-----------------------------EYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLA 768 (883)
Q Consensus 718 ~~ia~~~gi~~-----------------------------~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~ 768 (883)
.+||+++||.. ..+|+|++|++|.++|+.||+.|+.|+|.|||.||+||||
T Consensus 615 ~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK 694 (972)
T KOG0202|consen 615 EAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALK 694 (972)
T ss_pred HHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhh
Confidence 99999999931 1689999999999999999999999999999999999999
Q ss_pred hCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcccCccccH
Q 002770 769 LADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAA-GALLPQYDFAMTP 847 (883)
Q Consensus 769 ~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~-~~~~~~~g~~l~P 847 (883)
.||+||||| .+|++.+|++||+||.+|||+.|..++++||++|+|||+++.|.+..|+..+.+-+ +.. +|++ .|
T Consensus 695 ~AdIGIAMG-~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa---~~~p-~p 769 (972)
T KOG0202|consen 695 KADIGIAMG-ISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAA---FGIP-EP 769 (972)
T ss_pred hcccceeec-CCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH---hCCC-Cc
Confidence 999999993 39999999999999999999999999999999999999999999999984433321 111 3432 45
Q ss_pred HHHHHHhhhhhHHHHHhhhhcccccc
Q 002770 848 SLSGGLMALSSIFVVSNSLLLQFHEF 873 (883)
Q Consensus 848 ~~aa~~m~~ssl~v~~nsl~l~~~~~ 873 (883)
+.+..+.+..-+.-=.-|..|-+.++
T Consensus 770 L~pvQiLWiNlvtDG~PA~aLG~ep~ 795 (972)
T KOG0202|consen 770 LIPVQILWINLVTDGPPATALGFEPV 795 (972)
T ss_pred ccchhhheeeeeccCCchhhcCCCCC
Confidence 55556666655555555556665544
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-78 Score=749.96 Aligned_cols=562 Identities=21% Similarity=0.276 Sum_probs=454.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEE
Q 002770 277 FFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLV 356 (883)
Q Consensus 277 ~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v 356 (883)
++..++.+++++++.-.+..+++.|+.+.+++|.++.|.+++|+| ||++++|+++||+|||+|.|
T Consensus 103 ~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViR---------------dg~~~~I~~~~lv~GDiv~l 167 (997)
T TIGR01106 103 NLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIR---------------DGEKMSINAEQVVVGDLVEV 167 (997)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEE---------------CCEEEEeeHHHCCCCCEEEE
Confidence 334455566677778888999999999999999999999999998 89999999999999999999
Q ss_pred CCCCeeeeeEEEEeec-eEEeeccccCCCceeeccCCC----------ccccceeeecCcEEEEEEeecCccchhhhhhh
Q 002770 357 LPGETIPVDGRVLAGR-SVVDESMLSGESLPVFKEEGF----------TVSAGTINWDGPLRIEACSTGSNSMISKIVSM 425 (883)
Q Consensus 357 ~~Ge~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~g~----------~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~ 425 (883)
++||+|||||+|++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|.+.++|++||.+|.+|++.++
T Consensus 168 ~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~ 247 (997)
T TIGR01106 168 KGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASL 247 (997)
T ss_pred CCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhh
Confidence 9999999999999996 689999999999999998875 59999999999999999999999999999999
Q ss_pred hHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhccccc
Q 002770 426 VEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCAL 505 (883)
Q Consensus 426 v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL 505 (883)
+++++.+++|+|+.+++++.+++.++++++++.+++|++.+. .+...+.+++++++++|||+|
T Consensus 248 ~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~i~v~v~~iP~~L 310 (997)
T TIGR01106 248 ASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY-----------------TWLEAVIFLIGIIVANVPEGL 310 (997)
T ss_pred hhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------------CHHHHHHHHHHHHhhcCCccc
Confidence 999888899999999999999999888888877776654331 234467788999999999999
Q ss_pred chhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC---------------CCh---
Q 002770 506 GLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV---------------YDE--- 567 (883)
Q Consensus 506 ~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~---------------~~~--- 567 (883)
++++++++..+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+ ++.
T Consensus 311 ~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (997)
T TIGR01106 311 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSA 390 (997)
T ss_pred hHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccCCcccH
Confidence 99999999999999999999999999999999999999999999999999999886321 010
Q ss_pred --HHHHHHHHHhhh----------------ccCChHHHHHHHHHHhcCCC-------CCCCcCcccccCceEEEE-E--C
Q 002770 568 --SEILKIAAAVEK----------------TATHPIAKAIVNKAESLNLT-------SPITRGQLAEPGFGILGE-V--D 619 (883)
Q Consensus 568 --~~~l~~~a~~e~----------------~s~hPi~~Ai~~~~~~~~~~-------~~~~~~~~~~~g~g~~~~-~--~ 619 (883)
+.++..++..+. ...+|.+.|+++++...+.. .+........+.+..+.. + +
T Consensus 391 ~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~pF~s~rK~m~~v~~~~ 470 (997)
T TIGR01106 391 TWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENE 470 (997)
T ss_pred HHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEeccCCCCceEEEEEecc
Confidence 134444433321 13579999999998754321 111112233334443322 1 1
Q ss_pred ----C--EEEEecCHHHHHHHhhccCCCchhhhHHHH-HhhhcccccCcCCCCCeEEEEEe-------------------
Q 002770 620 ----G--RLVAVGTLEWVYERFQKQGDHSDVQHLEHA-VTHQSSELASPSNYSKSVVYVGR------------------- 673 (883)
Q Consensus 620 ----g--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~a~------------------- 673 (883)
+ ..+.||+++.++++|...........+.+. .+...+....+.++|.+++.+|+
T Consensus 471 ~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~~~~~~ 550 (997)
T TIGR01106 471 DPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDV 550 (997)
T ss_pred CCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccccccchhh
Confidence 1 357999999999999743211111111000 01111122234667888877764
Q ss_pred ----cCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--------------------
Q 002770 674 ----EGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE-------------------- 729 (883)
Q Consensus 674 ----~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~-------------------- 729 (883)
++++++|+++++||+|++++++|++|+++|++++|+|||+..+|.++|+++|+-.+
T Consensus 551 ~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~ 630 (997)
T TIGR01106 551 NFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVN 630 (997)
T ss_pred hccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccc
Confidence 24469999999999999999999999999999999999999999999999999310
Q ss_pred -------------------------------eEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeec
Q 002770 730 -------------------------------YINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQI 778 (883)
Q Consensus 730 -------------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~ 778 (883)
.+|||++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||||
T Consensus 631 ~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg- 709 (997)
T TIGR01106 631 PRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMG- 709 (997)
T ss_pred cccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecC-
Confidence 299999999999999999999999999999999999999999999993
Q ss_pred CCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHHHHhhhhh
Q 002770 779 EAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSS 858 (883)
Q Consensus 779 ~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ss 858 (883)
.+|++.++++||+++++|+|..+++++++||+++.|+++++.|.++.|+..+.+.+... .++. -.|+.+..++...-
T Consensus 710 ~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~--~~~~-~~pl~~~qlL~inl 786 (997)
T TIGR01106 710 IAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFI--IANI-PLPLGTITILCIDL 786 (997)
T ss_pred CcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH--HHcC-cchhHHHHHHHHHH
Confidence 26899999999999999999999999999999999999999999999987665544222 2332 24666667778888
Q ss_pred HHHHHhhhhccccccc
Q 002770 859 IFVVSNSLLLQFHEFE 874 (883)
Q Consensus 859 l~v~~nsl~l~~~~~~ 874 (883)
+...+-++.|.+.+++
T Consensus 787 i~d~lp~~al~~e~~~ 802 (997)
T TIGR01106 787 GTDMVPAISLAYEKAE 802 (997)
T ss_pred HHHHHHHHHHhcCCCC
Confidence 8888888888775443
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-78 Score=744.25 Aligned_cols=561 Identities=22% Similarity=0.286 Sum_probs=443.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCC
Q 002770 280 EPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPG 359 (883)
Q Consensus 280 ~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~G 359 (883)
.++++++++++.-.+..+++.|+.+++++|.++.+.+++|+| ||++++|+++||+|||+|.+++|
T Consensus 83 ~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViR---------------dg~~~~I~a~eLVpGDIv~L~~G 147 (1053)
T TIGR01523 83 EGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIR---------------NGKSDAIDSHDLVPGDICLLKTG 147 (1053)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEe---------------CCeeeecCHhhCCCCCEEEECCC
Confidence 456666777788888999999999999999999999999998 99999999999999999999999
Q ss_pred CeeeeeEEEEeec-eEEeeccccCCCceeeccCC---------------CccccceeeecCcEEEEEEeecCccchhhhh
Q 002770 360 ETIPVDGRVLAGR-SVVDESMLSGESLPVFKEEG---------------FTVSAGTINWDGPLRIEACSTGSNSMISKIV 423 (883)
Q Consensus 360 e~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~g---------------~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~ 423 (883)
|+|||||+|++++ ..||||+|||||.||.|.+. +.+|+||.+.+|.++++|++||.+|.+|+|.
T Consensus 148 d~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa 227 (1053)
T TIGR01523 148 DTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIA 227 (1053)
T ss_pred CEeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHH
Confidence 9999999999984 78999999999999999642 3589999999999999999999999999999
Q ss_pred hhhHhhhC-----------------------------------CCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcC
Q 002770 424 SMVEEAQG-----------------------------------REAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQ 468 (883)
Q Consensus 424 ~~v~~~~~-----------------------------------~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~ 468 (883)
+++.+.+. .++|+|+.+++++.++..+.++++++.+++..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~--- 304 (1053)
T TIGR01523 228 AGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD--- 304 (1053)
T ss_pred HHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---
Confidence 98865431 2499999999999988777766666555432210
Q ss_pred cccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcc
Q 002770 469 IFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTG 548 (883)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTG 548 (883)
.+...+.++++++++++|.+|+..+.++++.+..+++|+++++|++.++|+||++++||+||||
T Consensus 305 ----------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTG 368 (1053)
T TIGR01523 305 ----------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTG 368 (1053)
T ss_pred ----------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcC
Confidence 0123456789999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCceEEEEEeccC------------CCh------------------------------------------------H
Q 002770 549 TLTEGKPAVFNVASFV------------YDE------------------------------------------------S 568 (883)
Q Consensus 549 TLT~~~~~v~~v~~~~------------~~~------------------------------------------------~ 568 (883)
|||+|+|+|.+++..+ +++ .
T Consensus 369 TLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1053)
T TIGR01523 369 TITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFI 448 (1053)
T ss_pred ccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHH
Confidence 9999999999875321 000 1
Q ss_pred HHHHHHHHhh-------------hccCChHHHHHHHHHHhcCCCCC--------------------------------CC
Q 002770 569 EILKIAAAVE-------------KTATHPIAKAIVNKAESLNLTSP--------------------------------IT 603 (883)
Q Consensus 569 ~~l~~~a~~e-------------~~s~hPi~~Ai~~~~~~~~~~~~--------------------------------~~ 603 (883)
+++..++... ....+|.+.|++.++...+++.. ..
T Consensus 449 ~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (1053)
T TIGR01523 449 KLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFI 528 (1053)
T ss_pred HHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceE
Confidence 1333222221 11359999999999987765311 01
Q ss_pred cCcccccCceEEEEE---C-C---EEEEecCHHHHHHHhhccCCCc--hhhhHH-HHHhhhcccccCcCCCCCeEEEEEe
Q 002770 604 RGQLAEPGFGILGEV---D-G---RLVAVGTLEWVYERFQKQGDHS--DVQHLE-HAVTHQSSELASPSNYSKSVVYVGR 673 (883)
Q Consensus 604 ~~~~~~~g~g~~~~~---~-g---~~~~~Gs~~~i~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~a~ 673 (883)
..+...+.+..+..+ + + ..++||+|+.++++|....... ....+. +..+.+.+....++.+|.+++.+|+
T Consensus 529 ~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~ 608 (1053)
T TIGR01523 529 AEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFAS 608 (1053)
T ss_pred EEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEE
Confidence 112233334444433 1 2 3579999999999997532110 000010 0011111222335678888888875
Q ss_pred c------------------------CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc
Q 002770 674 E------------------------GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE 729 (883)
Q Consensus 674 ~------------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~ 729 (883)
. +++++|+++++|++|++++++|++||++||+++|+|||+..+|.++|+++||...
T Consensus 609 r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~ 688 (1053)
T TIGR01523 609 KSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPP 688 (1053)
T ss_pred EECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCc
Confidence 1 4579999999999999999999999999999999999999999999999999532
Q ss_pred -----------------------------------eEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeE
Q 002770 730 -----------------------------------YINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGI 774 (883)
Q Consensus 730 -----------------------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgI 774 (883)
.+++|++|+||.++|+.||++|+.|+|+|||.||+|||++|||||
T Consensus 689 ~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGI 768 (1053)
T TIGR01523 689 NFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGI 768 (1053)
T ss_pred cccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccE
Confidence 389999999999999999999999999999999999999999999
Q ss_pred EeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhccc-CccccHHHHHH
Q 002770 775 ALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAA-GALLPQY-DFAMTPSLSGG 852 (883)
Q Consensus 775 a~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~-~~~~~~~-g~~l~P~~aa~ 852 (883)
||+ .+|++.++++||+++.+|+|..|.+++++||+++++|++++.|.+..|+..+.+.+ +.++..+ |....|+.+..
T Consensus 769 Amg-~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~q 847 (1053)
T TIGR01523 769 AMG-INGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVE 847 (1053)
T ss_pred ecC-CCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHH
Confidence 992 27899999999999999999999999999999999999999999999986555443 2222111 33234666666
Q ss_pred HhhhhhHHHHHhhhhcccccccc
Q 002770 853 LMALSSIFVVSNSLLLQFHEFES 875 (883)
Q Consensus 853 ~m~~ssl~v~~nsl~l~~~~~~~ 875 (883)
+....-+...+-++.|.+.+++.
T Consensus 848 iL~inli~d~~palaL~~e~~~~ 870 (1053)
T TIGR01523 848 ILWCIMITSCFPAMGLGLEKAAP 870 (1053)
T ss_pred HHHHHHHHHHHHHHhhccCCCCh
Confidence 67777777777888887754443
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-79 Score=753.08 Aligned_cols=540 Identities=28% Similarity=0.381 Sum_probs=442.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEe
Q 002770 291 GRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLA 370 (883)
Q Consensus 291 g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~ 370 (883)
.-.+...+..|+.+++++|+++.+.+++|+| ||++++|+++||+|||+|++++||+||||++|++
T Consensus 116 n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R---------------~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~ 180 (917)
T COG0474 116 NALLGFVQEYRAEKALEALKKMSSPKAKVLR---------------DGKFVEIPASELVPGDIVLLEAGDVVPADLRLLE 180 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCceEEEe---------------CCcEEEecHHHCCCCcEEEECCCCccccceEEEE
Confidence 3344455666677788888888899999988 8999999999999999999999999999999999
Q ss_pred ece-EEeeccccCCCceeeccC--------------CCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCCh
Q 002770 371 GRS-VVDESMLSGESLPVFKEE--------------GFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAP 435 (883)
Q Consensus 371 G~~-~Vdes~LTGEs~pv~K~~--------------g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~ 435 (883)
++. .||||+|||||.|+.|.+ .+.+|+||.+.+|.+.+.|++||.+|.+|++.+++.......+|
T Consensus 181 ~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~~~~~t~ 260 (917)
T COG0474 181 SSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEVKTP 260 (917)
T ss_pred ecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccccccCCc
Confidence 987 899999999999999963 46789999999999999999999999999999999988788999
Q ss_pred hHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHH
Q 002770 436 IQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILV 515 (883)
Q Consensus 436 ~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~ 515 (883)
+|+.++++...++.+.+++++++++..++.+. ..+..++.+++++++.++|.+|+..+.++++.
T Consensus 261 l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~----------------~~~~~~~~~~v~l~va~IPegLp~~vti~la~ 324 (917)
T COG0474 261 LQRKLNKLGKFLLVLALVLGALVFVVGLFRGG----------------NGLLESFLTALALAVAAVPEGLPAVVTIALAL 324 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------------ccHHHHHHHHHHHHHhccccchHHHHHHHHHH
Confidence 99999999999999888888888777644322 11556789999999999999999999999999
Q ss_pred HHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC-CCh-H-----------HHHH---HHHHhhh
Q 002770 516 GTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV-YDE-S-----------EILK---IAAAVEK 579 (883)
Q Consensus 516 ~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~-~~~-~-----------~~l~---~~a~~e~ 579 (883)
+..+++|+++++|+++++|+||++|+||+|||||||+|+|+|.+++..+ ..+ + +++. ++.....
T Consensus 325 g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lc~~~~~ 404 (917)
T COG0474 325 GAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDIDDKDLKDSPALLRFLLAAALCNSVTP 404 (917)
T ss_pred HHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcccccccccccchHHHHHHHHHHhcCcccc
Confidence 9999999999999999999999999999999999999999999998762 111 1 1222 1221122
Q ss_pred c------cCChHHHHHHHHHHhcCC--CCC-------CCcCcccccCceEEEEEC------CEEEEecCHHHHHHHhhcc
Q 002770 580 T------ATHPIAKAIVNKAESLNL--TSP-------ITRGQLAEPGFGILGEVD------GRLVAVGTLEWVYERFQKQ 638 (883)
Q Consensus 580 ~------s~hPi~~Ai~~~~~~~~~--~~~-------~~~~~~~~~g~g~~~~~~------g~~~~~Gs~~~i~~~~~~~ 638 (883)
. ..+|.+.||++++++.+. +.. ....+...+.+..++.+. ...++||+|+.+.++|...
T Consensus 405 ~~~~~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~ 484 (917)
T COG0474 405 EKNGWYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI 484 (917)
T ss_pred cccCceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc
Confidence 2 579999999999998776 311 123344555565555542 2467999999999998753
Q ss_pred CC-----CchhhhHHHHHhhhcccccCcCCCCCeEEEEEe----------------cCceEEEEEEecCCCChhHHHHHH
Q 002770 639 GD-----HSDVQHLEHAVTHQSSELASPSNYSKSVVYVGR----------------EGEGIIGAIAISDSLRHDAEHTVR 697 (883)
Q Consensus 639 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~----------------~~~~~lG~i~l~D~lr~~~~~~i~ 697 (883)
.. .++.+.+....++ +.++|++++.+++ +++.++|+++++||+|++++++|+
T Consensus 485 ~~~~~~~~~~~~~~~~~~~~-------la~~glRvla~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~ 557 (917)
T COG0474 485 GELEPLTEEGLRTLEEAVKE-------LASEGLRVLAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIE 557 (917)
T ss_pred CcccccCHHHHHHHHHHHHH-------HHHHHHHHHHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHH
Confidence 11 1112222222222 2223333333222 245799999999999999999999
Q ss_pred HHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc---------------------------eEEEecCccchHHHHHHHhhc
Q 002770 698 SLQQKGIKTLLLSGDREEAVAATAKEVGIGKE---------------------------YINSSLTPQQKSEVISTLQTS 750 (883)
Q Consensus 698 ~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~---------------------------~v~~~~~p~~K~~~v~~l~~~ 750 (883)
.|+++||+++|+|||+..||.+||+++|+..+ .+|||++|+||.++|+.||+.
T Consensus 558 ~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~ 637 (917)
T COG0474 558 ELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKS 637 (917)
T ss_pred HHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998322 489999999999999999999
Q ss_pred CCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 751 GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAI 830 (883)
Q Consensus 751 g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i 830 (883)
|+.|+|+|||.||+|||++|||||||+ ++|+|+++++||+++.++++..+..++++||++|.|+++.+.+.+..|+..+
T Consensus 638 g~vVamtGDGvNDapALk~ADVGIamg-~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~ 716 (917)
T COG0474 638 GHVVAMTGDGVNDAPALKAADVGIAMG-GEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEV 716 (917)
T ss_pred CCEEEEeCCCchhHHHHHhcCccEEec-ccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999994 4799999999999999999999999999999999999999999999999744
Q ss_pred HHHH-hhhhcccCccccHHHHHHHhhhhhHHHHHhhhhccccc
Q 002770 831 PIAA-GALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHE 872 (883)
Q Consensus 831 ~la~-~~~~~~~g~~l~P~~aa~~m~~ssl~v~~nsl~l~~~~ 872 (883)
.+.+ +.+ ++....|+.+-.++...-+...+.++.|...+
T Consensus 717 ~~~~~~~~---~~~~~~p~~~~qll~inll~d~~pa~~L~~~~ 756 (917)
T COG0474 717 LTLLIYSL---FNLFFLPLTPLQLLWINLLTDSLPALALGVED 756 (917)
T ss_pred HHHHHHHH---HhcccccHHHHHHHHHHHHHhhhhhheeecCC
Confidence 4433 322 22224577777888888888888888887664
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-78 Score=707.98 Aligned_cols=477 Identities=35% Similarity=0.510 Sum_probs=428.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc--ccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCee
Q 002770 285 LGFVLLGRSLEERARIRASSDMNELLS--LVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETI 362 (883)
Q Consensus 285 l~~~~~g~~le~~~~~ra~~~~~~l~~--~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~I 362 (883)
+++++++.+++.+++.++.+.+++|.+ +.|+++++++ +| +++|++++|+|||+|.+++||+|
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r---------------~g-~~~V~~~~l~~GDiv~v~~G~~i 66 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLR---------------NG-WKEIPASDLVPGDIVLVKSGEIV 66 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEE---------------CC-eEEEEHHHCCCCCEEEECCCCEe
Confidence 446788999999999999999999998 8899999988 67 89999999999999999999999
Q ss_pred eeeEEEEeeceEEeeccccCCCceeeccCCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHH
Q 002770 363 PVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADA 442 (883)
Q Consensus 363 PaDg~vl~G~~~Vdes~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~ 442 (883)
||||+|++|++.||||+|||||.|+.|.+|+.+++||.+.+|.++++|+++|.+|..+++...++.++..++++|+..++
T Consensus 67 P~Dg~vl~g~~~vdes~LTGEs~pv~k~~g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~ 146 (499)
T TIGR01494 67 PADGVLLSGSCFVDESNLTGESVPVLKTAGDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDR 146 (499)
T ss_pred eeeEEEEEccEEEEcccccCCCCCeeeccCCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred hc-hhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHH
Q 002770 443 IA-GPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGA 521 (883)
Q Consensus 443 ~~-~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a 521 (883)
+. .+|++++++++++++++|++.... ...+..++.+++++++++|||+|++++|+++..+..+++
T Consensus 147 ~~~~~~~~~~~~la~~~~~~~~~~~~~--------------~~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~ 212 (499)
T TIGR01494 147 LSDIIFILFVLLIALAVFLFWAIGLWD--------------PNSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLA 212 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcc--------------cccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Confidence 99 899999999999888888654311 002456789999999999999999999999999999999
Q ss_pred hcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccCCChHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCC
Q 002770 522 KQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSP 601 (883)
Q Consensus 522 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~ 601 (883)
++|+++|+++++|+||++|++|||||||||+|+|++.++...+. ++.+.||+++|++++++.....
T Consensus 213 ~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------~~~s~hp~~~ai~~~~~~~~~~-- 278 (499)
T TIGR01494 213 KKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------EYLSGHPDERALVKSAKWKILN-- 278 (499)
T ss_pred HCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC------------CcCCCChHHHHHHHHhhhcCcc--
Confidence 99999999999999999999999999999999999999875431 5678999999999998754321
Q ss_pred CCcCcccccCceEEEEECC--EEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEE
Q 002770 602 ITRGQLAEPGFGILGEVDG--RLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGII 679 (883)
Q Consensus 602 ~~~~~~~~~g~g~~~~~~g--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~l 679 (883)
..++...+ +|+.+.+++ +.+.+|+++++.++|.. ..+... .+...|.+++++++++. ++
T Consensus 279 -~~~f~~~~-~~~~~~~~~~~~~~~~G~~~~i~~~~~~---------~~~~~~-------~~~~~g~~~~~~a~~~~-~~ 339 (499)
T TIGR01494 279 -VFEFSSVR-KRMSVIVRGPDGTYVKGAPEFVLSRVKD---------LEEKVK-------ELAQSGLRVLAVASKET-LL 339 (499)
T ss_pred -eeccCCCC-ceEEEEEecCCcEEEeCCHHHHHHhhHH---------HHHHHH-------HHHhCCCEEEEEEECCe-EE
Confidence 23444445 577777654 67999999999987642 111111 12347889999999887 99
Q ss_pred EEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEEcC
Q 002770 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGD 759 (883)
Q Consensus 680 G~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGD 759 (883)
|++.++|++|++++++|+.|+++|++++|+|||+..++..+|+++|| +++++|++|.++|+.+|+.|+.|+|+||
T Consensus 340 g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-----~~~~~p~~K~~~v~~l~~~g~~v~~vGD 414 (499)
T TIGR01494 340 GLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-----FARVTPEEKAALVEALQKKGRVVAMTGD 414 (499)
T ss_pred EEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-----eeccCHHHHHHHHHHHHHCCCEEEEECC
Confidence 99999999999999999999999999999999999999999999997 7899999999999999999999999999
Q ss_pred CccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 002770 760 GINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGA 836 (883)
Q Consensus 760 g~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~ 836 (883)
|.||+|||+.|||||+| + ++++||++++++++..++.++++||+++++++||+.|++.||++.+|+++++
T Consensus 415 g~nD~~al~~Advgia~--~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 415 GVNDAPALKKADVGIAM--G-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred ChhhHHHHHhCCCcccc--c-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 4 6889999999999999999999999999999999999999999999999754
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-77 Score=735.32 Aligned_cols=572 Identities=22% Similarity=0.291 Sum_probs=453.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEE
Q 002770 276 SFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVL 355 (883)
Q Consensus 276 ~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~ 355 (883)
.|++ +.++++++++.-.+..+++.|+.+.+++|.++.|.+++|+| ||++++|+++||+|||+|.
T Consensus 35 ~~~~-~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViR---------------dg~~~~I~~~~Lv~GDiv~ 98 (917)
T TIGR01116 35 AFVE-PFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLR---------------DGRWSVIKAKDLVPGDIVE 98 (917)
T ss_pred cHhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEE---------------CCEEEEEEHHHCCCCCEEE
Confidence 3444 55556667778888999999999999999999999999998 8999999999999999999
Q ss_pred ECCCCeeeeeEEEEeec-eEEeeccccCCCceeeccCC-------------CccccceeeecCcEEEEEEeecCccchhh
Q 002770 356 VLPGETIPVDGRVLAGR-SVVDESMLSGESLPVFKEEG-------------FTVSAGTINWDGPLRIEACSTGSNSMISK 421 (883)
Q Consensus 356 v~~Ge~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~g-------------~~v~aGt~~~~G~~~~~v~~~g~~T~~~~ 421 (883)
+++||+|||||+|++|+ +.||||+|||||.|+.|.++ +.+|+||.+.+|.++++|++||.+|.+|+
T Consensus 99 l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V~~tG~~T~~gk 178 (917)
T TIGR01116 99 LAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGK 178 (917)
T ss_pred ECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEEEEeCCCCHHHH
Confidence 99999999999999995 89999999999999999876 77999999999999999999999999999
Q ss_pred hhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhc
Q 002770 422 IVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSC 501 (883)
Q Consensus 422 i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~ 501 (883)
|.+++.+++.+++|+|+.+++++.+++++++++++++++++...... +. ....+...+...+..++++++++|
T Consensus 179 i~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~i~l~v~~i 251 (917)
T TIGR01116 179 IRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFND--PA-----LGGGWIQGAIYYFKIAVALAVAAI 251 (917)
T ss_pred HHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cc-----ccchhHHHHHHHHHHHHhhhhhcc
Confidence 99999998899999999999999999887777777666554321110 00 000111223445667889999999
Q ss_pred ccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC---------------CC
Q 002770 502 PCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV---------------YD 566 (883)
Q Consensus 502 P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~---------------~~ 566 (883)
||+|+++++++++.+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+ ++
T Consensus 252 P~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 331 (917)
T TIGR01116 252 PEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYA 331 (917)
T ss_pred ccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccC
Confidence 999999999999999999999999999999999999999999999999999999999886421 10
Q ss_pred h-------------------HHHHHHHHHhhh-------------ccCChHHHHHHHHHHhcCCCCCCC-----------
Q 002770 567 E-------------------SEILKIAAAVEK-------------TATHPIAKAIVNKAESLNLTSPIT----------- 603 (883)
Q Consensus 567 ~-------------------~~~l~~~a~~e~-------------~s~hPi~~Ai~~~~~~~~~~~~~~----------- 603 (883)
+ ++++..++.... ...+|.+.|+++++++.+++....
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~ 411 (917)
T TIGR01116 332 PEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALG 411 (917)
T ss_pred CCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccc
Confidence 0 112222221110 135999999999988776542211
Q ss_pred ------------cCcccccCceEEEEE-C----CEEEEecCHHHHHHHhhccCCC-chhhhHH-HHHhhhcccccCcCC-
Q 002770 604 ------------RGQLAEPGFGILGEV-D----GRLVAVGTLEWVYERFQKQGDH-SDVQHLE-HAVTHQSSELASPSN- 663 (883)
Q Consensus 604 ------------~~~~~~~g~g~~~~~-~----g~~~~~Gs~~~i~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~- 663 (883)
..+...+.+..+..+ + ...+.||+++.++++|...... .....+. +..+...+....++.
T Consensus 412 ~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~ 491 (917)
T TIGR01116 412 CNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTT 491 (917)
T ss_pred hhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhh
Confidence 111222333333333 2 2568899999999999753221 1000000 001111122233566
Q ss_pred CCCeEEEEEec----------------------CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH
Q 002770 664 YSKSVVYVGRE----------------------GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATA 721 (883)
Q Consensus 664 ~g~~~~~~a~~----------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia 721 (883)
+|.+++.+|+. +.+++|+++++|++|++++++|++||++|++++|+|||+..+|.++|
T Consensus 492 ~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia 571 (917)
T TIGR01116 492 KALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAIC 571 (917)
T ss_pred cCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHH
Confidence 78888888742 34689999999999999999999999999999999999999999999
Q ss_pred HHcCCCC-----------------------------ceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCe
Q 002770 722 KEVGIGK-----------------------------EYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADV 772 (883)
Q Consensus 722 ~~~gi~~-----------------------------~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~Adv 772 (883)
+++|+.. ..+++|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||
T Consensus 572 ~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdV 651 (917)
T TIGR01116 572 RRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADI 651 (917)
T ss_pred HHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCe
Confidence 9999953 14899999999999999999999999999999999999999999
Q ss_pred eEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHHH
Q 002770 773 GIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGG 852 (883)
Q Consensus 773 gIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~ 852 (883)
||+| ++|++.++++||+++.+|++..+.+++++||++++|+++++.|.+..|+..+.+.+...+ +|+ -.|+.+..
T Consensus 652 Gia~--g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~--~~~-~~pl~~~q 726 (917)
T TIGR01116 652 GIAM--GSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAA--LGI-PEGLIPVQ 726 (917)
T ss_pred eEEC--CCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH--HcC-CchHHHHH
Confidence 9999 688999999999999999999999999999999999999999999999865555442211 232 24666666
Q ss_pred HhhhhhHHHHHhhhhcccccccc
Q 002770 853 LMALSSIFVVSNSLLLQFHEFES 875 (883)
Q Consensus 853 ~m~~ssl~v~~nsl~l~~~~~~~ 875 (883)
+...+-+...+-++.|.+.++++
T Consensus 727 ll~inli~d~lp~~~l~~~~~~~ 749 (917)
T TIGR01116 727 LLWVNLVTDGLPATALGFNPPDK 749 (917)
T ss_pred HHHHHHHHHHHHHHHHhcCCcch
Confidence 67777777778887776655543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-79 Score=685.27 Aligned_cols=597 Identities=21% Similarity=0.261 Sum_probs=464.4
Q ss_pred HHHHHHHHHHHHHHHccCCccCccchhhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCC
Q 002770 253 FGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVL--LGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSA 330 (883)
Q Consensus 253 l~~~~a~~~s~~~~~~~~~~~~~~~f~~~~~ll~~~~--~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~ 330 (883)
++++.++.+|++. + ++...|++.+++++.+++ +-.++.+|.+.+.-+.+++..+ ..+..|+|
T Consensus 163 vaAvvSl~lgi~~---~--g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~--~~k~~ViR--------- 226 (1034)
T KOG0204|consen 163 VAAVVSLGLGIYT---P--GIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKR--NIKFQVIR--------- 226 (1034)
T ss_pred HHHHHHHhhhhcc---C--CCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhh--ceEEEEEE---------
Confidence 4445555555443 2 233567787776554332 2345555555554444443221 23344555
Q ss_pred CccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeec-eEEeeccccCCCceeeccC--CCccccceeeecCcEE
Q 002770 331 DNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGR-SVVDESMLSGESLPVFKEE--GFTVSAGTINWDGPLR 407 (883)
Q Consensus 331 ~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~--g~~v~aGt~~~~G~~~ 407 (883)
||+.++|++.||++|||+.++.||.+||||++++|+ +.+|||++||||.++.|.+ +..+++||.+.+|.++
T Consensus 227 ------~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgk 300 (1034)
T KOG0204|consen 227 ------GGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGK 300 (1034)
T ss_pred ------CCEEEEEEEeeeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcce
Confidence 999999999999999999999999999999999996 6799999999999999976 5679999999999999
Q ss_pred EEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHh---cCcccchhccccCCCCCc
Q 002770 408 IEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIG---SQIFPDVLLSDMAGPNGN 484 (883)
Q Consensus 408 ~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 484 (883)
+.|+.+|.+|+.|+++..+......++|+|-.+++++..+..+.++++.+++++..... ......-...........
T Consensus 301 MlVTaVGmnt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~ 380 (1034)
T KOG0204|consen 301 MLVTAVGMNTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQ 380 (1034)
T ss_pred EEEEEeeecchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHH
Confidence 99999999999999999999988899999999999999998888888888877643322 110000000000000123
Q ss_pred hHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC
Q 002770 485 PLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV 564 (883)
Q Consensus 485 ~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~ 564 (883)
.+...|..+++++++|+|++|+||+.+++++++++|.+.+.++|+.+++|++|..++||.|||||||.|+|+|...+...
T Consensus 381 ~~v~~f~i~VTilVVAVPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~ 460 (1034)
T KOG0204|consen 381 EFVKFFIIAVTILVVAVPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGS 460 (1034)
T ss_pred HHHHHhhheeEEEEEECCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecc
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999875431
Q ss_pred --CC---------hH---HHHHHHHHh---------------hhccCChHHHHHHHHHHhcCCCCCCCcC-------ccc
Q 002770 565 --YD---------ES---EILKIAAAV---------------EKTATHPIAKAIVNKAESLNLTSPITRG-------QLA 608 (883)
Q Consensus 565 --~~---------~~---~~l~~~a~~---------------e~~s~hPi~~Ai~~~~~~~~~~~~~~~~-------~~~ 608 (883)
+. +. +++-...+. .+...+|.++||+.+....|.++..... +..
T Consensus 461 ~~~k~~~~~~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~F 540 (1034)
T KOG0204|consen 461 EHYKVNSPKSSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPF 540 (1034)
T ss_pred ccccccCcccccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEecc
Confidence 11 11 222222222 1335689999999999888776443221 112
Q ss_pred ccCceEEEEE-----CCE-EEEecCHHHHHHHhhccCCCc-hhhhHHHH-HhhhcccccCcCCCCCeEEEEEe-------
Q 002770 609 EPGFGILGEV-----DGR-LVAVGTLEWVYERFQKQGDHS-DVQHLEHA-VTHQSSELASPSNYSKSVVYVGR------- 673 (883)
Q Consensus 609 ~~g~g~~~~~-----~g~-~~~~Gs~~~i~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~a~------- 673 (883)
.+.+...+.+ +++ .++||+.|.++.+|....+.. ....+.+. .......++.++.++.+++++|+
T Consensus 541 NS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~ 620 (1034)
T KOG0204|consen 541 NSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGP 620 (1034)
T ss_pred CcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCC
Confidence 2222222222 333 889999999999998755422 11111111 11122334456778888888887
Q ss_pred -------------cCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC-------------
Q 002770 674 -------------EGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG------------- 727 (883)
Q Consensus 674 -------------~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~------------- 727 (883)
+|.+++|+++++||+|||++++|+.||++|++|.|+||||..||++||.+|||-
T Consensus 621 ~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~e 700 (1034)
T KOG0204|consen 621 DEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKE 700 (1034)
T ss_pred CCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchh
Confidence 134689999999999999999999999999999999999999999999999992
Q ss_pred --------------CceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEE
Q 002770 728 --------------KEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIIL 793 (883)
Q Consensus 728 --------------~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl 793 (883)
+-.|.||-+|.||..+|+.|+++|+.|+..|||+||+|||+.||||.||| -.|++.|||++|+++
T Consensus 701 Fr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAMG-IaGTeVAKEaSDIIi 779 (1034)
T KOG0204|consen 701 FRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAMG-IAGTEVAKEASDIII 779 (1034)
T ss_pred hhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhcc-ccchhhhhhhCCeEE
Confidence 12689999999999999999999999999999999999999999999995 379999999999999
Q ss_pred eCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHHHHhhhhhHHHHHhhhhcccccc
Q 002770 794 LGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEF 873 (883)
Q Consensus 794 ~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~~nsl~l~~~~~ 873 (883)
++|||+.|+.++.|||..|.+|+++++|.++.|++++.+++..-.. .| =.|+-|..+.+..-|+-.+-||.|..++|
T Consensus 780 ~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~-~~--dsPLtAVQlLWVNLIMDTLgALALATepP 856 (1034)
T KOG0204|consen 780 LDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACA-TG--DSPLTAVQLLWVNLIMDTLGALALATEPP 856 (1034)
T ss_pred EcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhh-cC--CccHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999999999999999888887633221 23 37999999999999999999999998766
Q ss_pred cc
Q 002770 874 ES 875 (883)
Q Consensus 874 ~~ 875 (883)
.+
T Consensus 857 t~ 858 (1034)
T KOG0204|consen 857 TD 858 (1034)
T ss_pred Ch
Confidence 44
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-74 Score=719.03 Aligned_cols=546 Identities=20% Similarity=0.253 Sum_probs=427.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEE
Q 002770 277 FFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLV 356 (883)
Q Consensus 277 ~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v 356 (883)
|+..++++++++++...+..++++|+.+.++++.. .+..++|+| ||++++|+++||+|||+|.|
T Consensus 192 ~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~R---------------dg~~~~I~s~eLvpGDiv~l 255 (1054)
T TIGR01657 192 YYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIR---------------NGKWVTIASDELVPGDIVSI 255 (1054)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEE---------------CCEEEEEEcccCCCCCEEEE
Confidence 34456666777788889999999998888888654 467888888 89999999999999999999
Q ss_pred C--CCCeeeeeEEEEeeceEEeeccccCCCceeeccCC------C------------ccccceeeec-------CcEEEE
Q 002770 357 L--PGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEG------F------------TVSAGTINWD-------GPLRIE 409 (883)
Q Consensus 357 ~--~Ge~IPaDg~vl~G~~~Vdes~LTGEs~pv~K~~g------~------------~v~aGt~~~~-------G~~~~~ 409 (883)
+ +|++|||||+|++|++.||||+|||||.|+.|.+. + .+|+||.+.+ |.+.++
T Consensus 256 ~~~~g~~iPaD~~ll~g~~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~v 335 (1054)
T TIGR01657 256 PRPEEKTMPCDSVLLSGSCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAI 335 (1054)
T ss_pred ecCCCCEecceEEEEeCcEEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEE
Confidence 9 99999999999999999999999999999999762 1 3999999984 889999
Q ss_pred EEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHH
Q 002770 410 ACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLS 489 (883)
Q Consensus 410 v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (883)
|++||.+|..|++++.+...+..++++++.+.++...++ +++++.++++++.+.. .+.++...
T Consensus 336 V~~TG~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~----~~a~i~~i~~~~~~~~-------------~~~~~~~~ 398 (1054)
T TIGR01657 336 VVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLA----VLALIGFIYTIIELIK-------------DGRPLGKI 398 (1054)
T ss_pred EEeCCccccchHHHHHhhCCCCCCCchHHHHHHHHHHHH----HHHHHHHHHHHHHHHH-------------cCCcHHHH
Confidence 999999999999999998888888888887766644433 3333333332222110 12345567
Q ss_pred HHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccCCC---
Q 002770 490 LKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYD--- 566 (883)
Q Consensus 490 l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~~~--- 566 (883)
+.++++++++++|++|++++++++..++.+++|+||+||++.++|.+|++|++|||||||||+|+|+|.+++..+..
T Consensus 399 ~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~ 478 (1054)
T TIGR01657 399 ILRSLDIITIVVPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEF 478 (1054)
T ss_pred HHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999998753210
Q ss_pred -----------hHHHHHHHHHhh-------hccCChHHHHHHHHHHhcC-------CCC---------------CCCcCc
Q 002770 567 -----------ESEILKIAAAVE-------KTATHPIAKAIVNKAESLN-------LTS---------------PITRGQ 606 (883)
Q Consensus 567 -----------~~~~l~~~a~~e-------~~s~hPi~~Ai~~~~~~~~-------~~~---------------~~~~~~ 606 (883)
...++...+... ....+|++.|+++++.... ... .....+
T Consensus 479 ~~~~~~~~~~~~~~~~~~~a~C~~~~~~~~~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~ 558 (1054)
T TIGR01657 479 LKIVTEDSSLKPSITHKALATCHSLTKLEGKLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRF 558 (1054)
T ss_pred ccccccccccCchHHHHHHHhCCeeEEECCEEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEE
Confidence 011222222211 2357999999999763210 000 000111
Q ss_pred ccccCceEEEEE---C--C--EEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEec-----
Q 002770 607 LAEPGFGILGEV---D--G--RLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGRE----- 674 (883)
Q Consensus 607 ~~~~g~g~~~~~---~--g--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~----- 674 (883)
...+.+..+..+ + + ..++||+||.+.++|.....+++..+ ... .+..+|.+++.+|+.
T Consensus 559 pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~---~~~-------~~a~~G~RVLalA~k~l~~~ 628 (1054)
T TIGR01657 559 QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQE---VLK-------SYTREGYRVLALAYKELPKL 628 (1054)
T ss_pred eecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHH---HHH-------HHHhcCCEEEEEEEeecCcc
Confidence 222233333322 1 2 37899999999999975332222222 222 246689999998862
Q ss_pred ---------------CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC-c---------
Q 002770 675 ---------------GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK-E--------- 729 (883)
Q Consensus 675 ---------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~-~--------- 729 (883)
++.|+|+++|+|++|++++++|++||++||+++|+|||+..||.++|+++||-+ +
T Consensus 629 ~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~ 708 (1054)
T TIGR01657 629 TLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAE 708 (1054)
T ss_pred chhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecc
Confidence 347999999999999999999999999999999999999999999999999921 0
Q ss_pred -----------------------------------------------------------------------eEEEecCcc
Q 002770 730 -----------------------------------------------------------------------YINSSLTPQ 738 (883)
Q Consensus 730 -----------------------------------------------------------------------~v~~~~~p~ 738 (883)
.||||++|+
T Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~ 788 (1054)
T TIGR01657 709 PPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPD 788 (1054)
T ss_pred cccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHH
Confidence 489999999
Q ss_pred chHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHH
Q 002770 739 QKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQN 818 (883)
Q Consensus 739 ~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n 818 (883)
||.++|+.||+.|+.|+|+|||.||+|||++||||||| +++ + |..+||+++.+++++.++.+|++||+++.++++.
T Consensus 789 qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam--~~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~ 864 (1054)
T TIGR01657 789 QKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISL--SEA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQM 864 (1054)
T ss_pred HHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceee--ccc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 443 3 4489999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccCccccHHHHHHHhhhhhHHHHHhhhhccccccc
Q 002770 819 LSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVSNSLLLQFHEFE 874 (883)
Q Consensus 819 ~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa~~m~~ssl~v~~nsl~l~~~~~~ 874 (883)
+.|.+.|+++...... .++ ..|..++|+ .++...-++..+.++.+.+.+|.
T Consensus 865 ~~~~~~~~~~~~~~~~-~l~-~~~~~l~~~---Q~l~i~li~~~~~~l~l~~~~p~ 915 (1054)
T TIGR01657 865 FKYMALYSLIQFYSVS-ILY-LIGSNLGDG---QFLTIDLLLIFPVALLMSRNKPL 915 (1054)
T ss_pred HHHHHHHHHHHHHHHH-HHH-HccCcCccH---HHHHHHHHHHHHHHHHHHcCCch
Confidence 9999999986543322 222 234445544 56677777888888877765443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-63 Score=534.68 Aligned_cols=547 Identities=27% Similarity=0.388 Sum_probs=413.1
Q ss_pred HHHHHHHHHHHHHHHHHHccCCccCccchhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc-ceEEEEcCCCCC
Q 002770 250 LVGFGSIVAFLISLVSLLKPELEWDASFFEEPV-MLLGFVLLGRSLEERARIRASSDMNELLSLVST-QSRLVITSSESG 327 (883)
Q Consensus 250 Lv~l~~~~a~~~s~~~~~~~~~~~~~~~f~~~~-~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~-~~~v~~~~~~~~ 327 (883)
++.+|++++.++.++--+++..+....|....+ .+.+-+++..+-|..++.|.+....+|++...+ .+++++.
T Consensus 37 vv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~----- 111 (681)
T COG2216 37 VVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRA----- 111 (681)
T ss_pred eehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcC-----
Confidence 444555555444443333332121223333322 333445567888888887766666666655432 4454441
Q ss_pred CCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeeceEEeeccccCCCceeeccCC---CccccceeeecC
Q 002770 328 SSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEG---FTVSAGTINWDG 404 (883)
Q Consensus 328 ~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~~~Vdes~LTGEs~pv~K~~g---~~v~aGt~~~~G 404 (883)
||.++.|++.+|+.||+|+|..||.||+||.|++|.+.||||.+||||.||-|+.| +.|-.||.+.+-
T Consensus 112 ---------~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~asVdESAITGESaPViresGgD~ssVtGgT~v~SD 182 (681)
T COG2216 112 ---------DGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVASVDESAITGESAPVIRESGGDFSSVTGGTRVLSD 182 (681)
T ss_pred ---------CCCeeeccccccccCCEEEEecCCCccCCCeEEeeeeecchhhccCCCcceeeccCCCcccccCCcEEeee
Confidence 68899999999999999999999999999999999999999999999999999998 789999999999
Q ss_pred cEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHH-HHHHHHhcCcccchhccccCCCCC
Q 002770 405 PLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATF-AFWYYIGSQIFPDVLLSDMAGPNG 483 (883)
Q Consensus 405 ~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 483 (883)
.++++++....+|++.|++.+++.++.+|+|-+--+.-+..-++.+.++ +.+++ .+-.|.+ +
T Consensus 183 ~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTliFL~-~~~Tl~p~a~y~~----------------g 245 (681)
T COG2216 183 WLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTILLSGLTLIFLL-AVATLYPFAIYSG----------------G 245 (681)
T ss_pred eEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHHHHH-HHHhhhhHHHHcC----------------C
Confidence 9999999999999999999999999999999765544332222221111 11111 1111110 1
Q ss_pred chHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEecc
Q 002770 484 NPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASF 563 (883)
Q Consensus 484 ~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~ 563 (883)
.. ..+...+++++..+|..++--.+.-=..++.+..+.+++-+++.++|..|.+|++..|||||+|-|+-.-.++.+.
T Consensus 246 ~~--~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~ 323 (681)
T COG2216 246 GA--ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPV 323 (681)
T ss_pred CC--cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecC
Confidence 11 1234567788888888877666655567888999999999999999999999999999999999999888887764
Q ss_pred -CCChHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCCCCcCc---cccc---CceEEEE-E-CCEEEEecCHHHHHHH
Q 002770 564 -VYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQ---LAEP---GFGILGE-V-DGRLVAVGTLEWVYER 634 (883)
Q Consensus 564 -~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~~~~~~---~~~~---g~g~~~~-~-~g~~~~~Gs~~~i~~~ 634 (883)
+.+++++...+....-..+.|-.+.|+..+++.++..+..... +..| .-.+++. . +++.+.||+.+.+.+.
T Consensus 324 ~gv~~~~la~aa~lsSl~DeTpEGrSIV~LA~~~~~~~~~~~~~~~~~fvpFtA~TRmSGvd~~~~~~irKGA~dai~~~ 403 (681)
T COG2216 324 PGVSEEELADAAQLASLADETPEGRSIVELAKKLGIELREDDLQSHAEFVPFTAQTRMSGVDLPGGREIRKGAVDAIRRY 403 (681)
T ss_pred CCCCHHHHHHHHHHhhhccCCCCcccHHHHHHHhccCCCcccccccceeeecceecccccccCCCCceeecccHHHHHHH
Confidence 6778888887777777888999999999999887664443211 1111 1111111 1 3478999999999887
Q ss_pred hhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcH
Q 002770 635 FQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDRE 714 (883)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~ 714 (883)
....... ....++..+++ .+..|.+.+.+..++. ++|++.++|-+|++.+|-+.+||++|||++|+||||+
T Consensus 404 v~~~~g~-~p~~l~~~~~~-------vs~~GGTPL~V~~~~~-~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~ 474 (681)
T COG2216 404 VRERGGH-IPEDLDAAVDE-------VSRLGGTPLVVVENGR-ILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNP 474 (681)
T ss_pred HHhcCCC-CCHHHHHHHHH-------HHhcCCCceEEEECCE-EEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCH
Confidence 6533221 11222222222 2557889999999988 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEe
Q 002770 715 EAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILL 794 (883)
Q Consensus 715 ~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~ 794 (883)
.||..+|++.|++ ++.++++||+|.++|+.-|.+|+-|+|+|||.||+|||++||||+|| ++|+++|||+++.|=+
T Consensus 475 ~TAa~IA~EAGVD--dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM--NsGTqAAkEAaNMVDL 550 (681)
T COG2216 475 LTAAAIAAEAGVD--DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM--NSGTQAAKEAANMVDL 550 (681)
T ss_pred HHHHHHHHHhCch--hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh--ccccHHHHHhhccccc
Confidence 9999999999998 79999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhhhhcccC
Q 002770 795 GNKLSQVVDALDLAKATMAKVYQNLSWAVA----YNVVAIPIAAGALLPQYD 842 (883)
Q Consensus 795 ~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~----~n~~~i~la~~~~~~~~g 842 (883)
++|...+.+.++.|++..-+--.--.|++. .-...||..+...+|.++
T Consensus 551 DS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~l~ 602 (681)
T COG2216 551 DSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQLG 602 (681)
T ss_pred CCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhccccc
Confidence 999999999999999865332222222222 113456655566666665
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-65 Score=576.98 Aligned_cols=591 Identities=20% Similarity=0.283 Sum_probs=441.8
Q ss_pred CchHHHHHHHHHHHHHHHHHHHc-cCCccCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCC
Q 002770 246 NMNSLVGFGSIVAFLISLVSLLK-PELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSS 324 (883)
Q Consensus 246 ~md~Lv~l~~~~a~~~s~~~~~~-~~~~~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~ 324 (883)
....|+.+|++++|+...+..-. ...+....| .+++|...+.+.-...+++..|..+-++++.++.|+.++|+|
T Consensus 95 ~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly--~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViR--- 169 (1019)
T KOG0203|consen 95 GFSILLWIGAILCFVAYGIQASTEDDPSDDNLY--LGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIR--- 169 (1019)
T ss_pred hHHHHHHHHHHHHHHHHhhhcccCCCCCCcceE--EEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeee---
Confidence 47788999998888765443222 111122233 234444444455566778888899999999999999999999
Q ss_pred CCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEeec-eEEeeccccCCCceeeccCC----------C
Q 002770 325 ESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGR-SVVDESMLSGESLPVFKEEG----------F 393 (883)
Q Consensus 325 ~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G~-~~Vdes~LTGEs~pv~K~~g----------~ 393 (883)
||....+..+|+++||+|.++-|++||||.+++++. +.+|+|+|||||+|..+.+. +
T Consensus 170 ------------dg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~N 237 (1019)
T KOG0203|consen 170 ------------DGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRN 237 (1019)
T ss_pred ------------cceeEEechhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhhee
Confidence 899999999999999999999999999999999997 68999999999999988663 4
Q ss_pred ccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccch
Q 002770 394 TVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDV 473 (883)
Q Consensus 394 ~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~ 473 (883)
.-+.+|.+.+|.+++.|.+||.+|.+|+|..+-..-...++|++...+.+..+.....+.+.+..|..-...+
T Consensus 238 i~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g------- 310 (1019)
T KOG0203|consen 238 IAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG------- 310 (1019)
T ss_pred eeeeeeEEecceEEEEEEecCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc-------
Confidence 5789999999999999999999999999999988888899999999999887776666666655554433322
Q ss_pred hccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCC
Q 002770 474 LLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEG 553 (883)
Q Consensus 474 ~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~ 553 (883)
..+..++...+.+++...|.+|...+...+.....+++++++++|+.++.|.||..++||.|||||||+|
T Consensus 311 ----------y~~l~avv~~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqn 380 (1019)
T KOG0203|consen 311 ----------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 380 (1019)
T ss_pred ----------chhHHHhhhhheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEec
Confidence 2344556668899999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEeccC-C---C--h--------------HHHHHHHHHhh----------------hccCChHHHHHHHHHHhcC
Q 002770 554 KPAVFNVASFV-Y---D--E--------------SEILKIAAAVE----------------KTATHPIAKAIVNKAESLN 597 (883)
Q Consensus 554 ~~~v~~v~~~~-~---~--~--------------~~~l~~~a~~e----------------~~s~hPi~~Ai~~~~~~~~ 597 (883)
+|+|.++|.+. + + + .+++..+.... ....++.+.|++++++...
T Consensus 381 rMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~ 460 (1019)
T KOG0203|consen 381 RMTVAHLWFDNQIHEADTTEDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELIL 460 (1019)
T ss_pred ceEEEeeccCCceeeeechhhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhc
Confidence 99999997642 0 0 0 12232222211 1245788999999886431
Q ss_pred CC-------CCCCcCcccccCceEEEE---------ECCEEEEecCHHHHHHHhhccCCCchh--------hhHHHHHhh
Q 002770 598 LT-------SPITRGQLAEPGFGILGE---------VDGRLVAVGTLEWVYERFQKQGDHSDV--------QHLEHAVTH 653 (883)
Q Consensus 598 ~~-------~~~~~~~~~~~g~g~~~~---------~~g~~~~~Gs~~~i~~~~~~~~~~~~~--------~~~~~~~~~ 653 (883)
-. .+.+.+............ .+.-.+.||+||.++++|+...-.... ....+.+..
T Consensus 461 ~~~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~~ 540 (1019)
T KOG0203|consen 461 GSVMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYLE 540 (1019)
T ss_pred chHHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHHH
Confidence 11 000001111111111111 122457899999999999753322111 111111111
Q ss_pred hc---cc-------ccCcCCCCCeEEEE------EecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHH
Q 002770 654 QS---SE-------LASPSNYSKSVVYV------GREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAV 717 (883)
Q Consensus 654 ~~---~~-------~~~~~~~g~~~~~~------a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a 717 (883)
+. ++ .-...+...+..+- -.++.+|+|.+.+-||+|..+++++..||.+||+++|+|||++.+|
T Consensus 541 lg~~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTA 620 (1019)
T KOG0203|consen 541 LGGLGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITA 620 (1019)
T ss_pred hhhcchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchh
Confidence 10 00 00011222222222 2256679999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCC---------------------------------------------------CceEEEecCccchHHHHHH
Q 002770 718 AATAKEVGIG---------------------------------------------------KEYINSSLTPQQKSEVIST 746 (883)
Q Consensus 718 ~~ia~~~gi~---------------------------------------------------~~~v~~~~~p~~K~~~v~~ 746 (883)
+++|+++||- .+.||||-+|+||+-+|+.
T Consensus 621 kAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~ 700 (1019)
T KOG0203|consen 621 KAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEG 700 (1019)
T ss_pred hhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhh
Confidence 9999999971 1268999999999999999
Q ss_pred HhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 747 LQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYN 826 (883)
Q Consensus 747 l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n 826 (883)
.|+.|..|+.+|||.||+|||+.||||||||. .|+|.+|++||++|++|||..|+.-+++||-+|.|.|+.++|.++.|
T Consensus 701 cQr~GaiVaVTGDGVNDsPALKKADIGVAMGi-aGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsN 779 (1019)
T KOG0203|consen 701 CQRQGAIVAVTGDGVNDSPALKKADIGVAMGI-AGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 779 (1019)
T ss_pred hhhcCcEEEEeCCCcCCChhhcccccceeecc-ccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhc
Confidence 99999999999999999999999999999953 78999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhcccCccc--cHHHHHHHhhhhhHHHHHhhhhccccccccc
Q 002770 827 VVAIPIAAGALLPQYDFAM--TPSLSGGLMALSSIFVVSNSLLLQFHEFESN 876 (883)
Q Consensus 827 ~~~i~la~~~~~~~~g~~l--~P~~aa~~m~~ssl~v~~nsl~l~~~~~~~~ 876 (883)
+--|..-+..+ .+|++| .++ .....--..-+.-|+.|.|..++++
T Consensus 780 ipEI~PfL~fi--~~giPLplgti---tIL~IDLgTDmvPAiSLAYE~aEsD 826 (1019)
T KOG0203|consen 780 IPEITPFLLFI--LFGIPLPLGTV---TILCIDLGTDIVPAISLAYEKAESD 826 (1019)
T ss_pred chhHhHHHHHH--HhCCCcccchh---hhhhhHhhcccchhhhHhccCchhh
Confidence 86544333222 245543 232 1111122233455667777655443
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-63 Score=539.59 Aligned_cols=523 Identities=24% Similarity=0.325 Sum_probs=410.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCeee
Q 002770 284 LLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIP 363 (883)
Q Consensus 284 ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IP 363 (883)
+..++++...+....+..|.+...+|+..+..++.|+| ||+|.++++++|+||||+.++.|++||
T Consensus 103 I~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlR---------------DGkw~E~eAs~lVPGDIlsik~GdIiP 167 (942)
T KOG0205|consen 103 ICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLR---------------DGKWSEQEASILVPGDILSIKLGDIIP 167 (942)
T ss_pred hheeeeecceeeeeeccccchHHHHHHhccCcccEEee---------------cCeeeeeeccccccCceeeeccCCEec
Confidence 33344455455555555677777788888888888888 999999999999999999999999999
Q ss_pred eeEEEEeec-eEEeeccccCCCceeeccCCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHH
Q 002770 364 VDGRVLAGR-SVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADA 442 (883)
Q Consensus 364 aDg~vl~G~-~~Vdes~LTGEs~pv~K~~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~ 442 (883)
|||++++|+ ..||+|.|||||.||.|.+||.+|+||.+..|.+.++|++||.+|.+|+-..+|.. ..+...+|+.++.
T Consensus 168 aDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~GHFqkVLt~ 246 (942)
T KOG0205|consen 168 ADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVGHFQKVLTG 246 (942)
T ss_pred CccceecCCccccchhhhcCCccccccCCCCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcccHHHHHHh
Confidence 999999998 56999999999999999999999999999999999999999999999999999988 5667889999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhh-cccccchhHHHHHHHHHHHHH
Q 002770 443 IAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVS-CPCALGLATPTAILVGTSLGA 521 (883)
Q Consensus 443 ~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva-~P~aL~la~p~a~~~~~~~~a 521 (883)
+..+.+..+.+-.++.+.+.|+..... ..-....+.++++. +|.+++-.+.+.+++|..+++
T Consensus 247 IGn~ci~si~~g~lie~~vmy~~q~R~-----------------~r~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLa 309 (942)
T KOG0205|consen 247 IGNFCICSIALGMLIEITVMYPIQHRL-----------------YRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLS 309 (942)
T ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhh-----------------hhhhhhheheeeecccccccceeeeehhhHHHHHHH
Confidence 888776555444443333333333221 12234456666666 999999999999999999999
Q ss_pred hcCceecCchHHhhhccCcEEEecCcccccCCceEEEE----EeccCCChHHHHHHHHHhh-hccCChHHHHHHHHHHhc
Q 002770 522 KQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFN----VASFVYDESEILKIAAAVE-KTATHPIAKAIVNKAESL 596 (883)
Q Consensus 522 ~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~----v~~~~~~~~~~l~~~a~~e-~~s~hPi~~Ai~~~~~~~ 596 (883)
++|.+.|...++|.|+.+|++|+|||||||.|+++|.+ +...+.+.++++-.++.+. ....+.+++|++....+.
T Consensus 310 qqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~~D~~~L~A~rAsr~en~DAID~A~v~~L~dP 389 (942)
T KOG0205|consen 310 QQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDDVLLTAARASRKENQDAIDAAIVGMLADP 389 (942)
T ss_pred hcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCChHHHHHHHHHHhhhcChhhHHHHHHHhhcCH
Confidence 99999999999999999999999999999999999977 4555777887766655443 445678899999876531
Q ss_pred C---CCCCCCcCccccc-CceEEEEE---CC--EEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCe
Q 002770 597 N---LTSPITRGQLAEP-GFGILGEV---DG--RLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKS 667 (883)
Q Consensus 597 ~---~~~~~~~~~~~~~-g~g~~~~~---~g--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 667 (883)
. ..+....-....| .+....++ +| +++.||+|+++++.|....+- .++..+.+. .+.+.|.+
T Consensus 390 Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~~i--~~~vh~~id-------~~AeRGlR 460 (942)
T KOG0205|consen 390 KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDHDI--PERVHSIID-------KFAERGLR 460 (942)
T ss_pred HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccCcc--hHHHHHHHH-------HHHHhcch
Confidence 0 0000000011112 22233333 23 577899999999998754331 122222232 24667888
Q ss_pred EEEEEecC------------ceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc------
Q 002770 668 VVYVGREG------------EGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE------ 729 (883)
Q Consensus 668 ~~~~a~~~------------~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~------ 729 (883)
.+.++++. ..++|+.-+-||+|.+..++|++....|+.|.|+|||...-++..++++|....
T Consensus 461 SLgVArq~v~e~~~~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmypss~ 540 (942)
T KOG0205|consen 461 SLAVARQEVPEKTKESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSA 540 (942)
T ss_pred hhhhhhhccccccccCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCchh
Confidence 77787642 258999999999999999999999999999999999999999999999987321
Q ss_pred ----------------------eEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHh
Q 002770 730 ----------------------YINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAAST 787 (883)
Q Consensus 730 ----------------------~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~ 787 (883)
+-|+.+.|++|.++|+.||++|+.++|.|||.||+|+|+.||+|||+ .+++|.++.
T Consensus 541 llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiav--a~atdaar~ 618 (942)
T KOG0205|consen 541 LLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAV--ADATDAARS 618 (942)
T ss_pred hccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceee--ccchhhhcc
Confidence 45788999999999999999999999999999999999999999999 999999999
Q ss_pred hcCEEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCccccHHHHH
Q 002770 788 AASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSG 851 (883)
Q Consensus 788 ~ad~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~la~~~~~~~~g~~l~P~~aa 851 (883)
++|+|+..+.++.+..++..+|.+|++++.+..|++...+-.+ +.++.+.-.|.+.++|.+..
T Consensus 619 asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv-~gfml~alIw~~df~pfmvl 681 (942)
T KOG0205|consen 619 ASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSPFMVL 681 (942)
T ss_pred cccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCHHHHH
Confidence 9999999999999999999999999999999888876654322 21111111244456776543
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-60 Score=598.65 Aligned_cols=558 Identities=19% Similarity=0.212 Sum_probs=411.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEE
Q 002770 275 ASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSV 354 (883)
Q Consensus 275 ~~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV 354 (883)
.+++...++++++..+++++|++.|+|+++.++ ++.++++++ +|++++++++||+|||+|
T Consensus 51 ~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n------~~~~~v~~~--------------~~~~~~i~~~~l~~GDiv 110 (1057)
T TIGR01652 51 GTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVN------NRLTEVLEG--------------HGQFVEIPWKDLRVGDIV 110 (1057)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHh------CcEEEEECC--------------CCcEEEeeeecccCCCEE
Confidence 345556677777888999999999999887653 467777761 378999999999999999
Q ss_pred EECCCCeeeeeEEEEe-----eceEEeeccccCCCceeeccCC-------------------------------------
Q 002770 355 LVLPGETIPVDGRVLA-----GRSVVDESMLSGESLPVFKEEG------------------------------------- 392 (883)
Q Consensus 355 ~v~~Ge~IPaDg~vl~-----G~~~Vdes~LTGEs~pv~K~~g------------------------------------- 392 (883)
.|++||+||||++|++ |.+.||||.|||||.|+.|.+.
T Consensus 111 ~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~ 190 (1057)
T TIGR01652 111 KVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTI 190 (1057)
T ss_pred EEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEE
Confidence 9999999999999997 7799999999999999998642
Q ss_pred -----------Cccccceeeec-CcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHH
Q 002770 393 -----------FTVSAGTINWD-GPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFA 460 (883)
Q Consensus 393 -----------~~v~aGt~~~~-G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~ 460 (883)
+.+++||.+.+ |.+.+.|++||.+|.+++. ....+.+++++++..+++..+++.+.++++++.++
T Consensus 191 ~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n---~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i 267 (1057)
T TIGR01652 191 NGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRN---ATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSV 267 (1057)
T ss_pred CCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhc---CCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 34688888888 8999999999999977664 34456678999999999988777666666655555
Q ss_pred HHHHHhcCcccchhccccC---CCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHH------HHHHhc----Ccee
Q 002770 461 FWYYIGSQIFPDVLLSDMA---GPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGT------SLGAKQ----GLLI 527 (883)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~------~~~a~~----gilv 527 (883)
+..++........|+.... ......+...+.+++.++...+|.+|...+.++...+. .++.++ ++++
T Consensus 268 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~v 347 (1057)
T TIGR01652 268 GAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASV 347 (1057)
T ss_pred HHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCccee
Confidence 4333221100001110000 00112234467788899999999999999998888777 666653 5999
Q ss_pred cCchHHhhhccCcEEEecCcccccCCceEEEEEeccC--C----C------------------------------h----
Q 002770 528 RGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV--Y----D------------------------------E---- 567 (883)
Q Consensus 528 k~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~--~----~------------------------------~---- 567 (883)
|+.+..|+||++++||+|||||||+|+|.+.++...+ + + +
T Consensus 348 r~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (1057)
T TIGR01652 348 RTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLV 427 (1057)
T ss_pred ecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHH
Confidence 9999999999999999999999999999999985321 0 0 0
Q ss_pred -------------HHHHHH---HHHh--h----------hccCChHHHHHHHHHHhcCCCCCCCc---------------
Q 002770 568 -------------SEILKI---AAAV--E----------KTATHPIAKAIVNKAESLNLTSPITR--------------- 604 (883)
Q Consensus 568 -------------~~~l~~---~a~~--e----------~~s~hPi~~Ai~~~~~~~~~~~~~~~--------------- 604 (883)
.+++.. +..+ + ..+.+|.+.|++++++..|+......
T Consensus 428 ~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~ 507 (1057)
T TIGR01652 428 DLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETK 507 (1057)
T ss_pred HhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEE
Confidence 011111 1111 1 11468999999999988876432100
Q ss_pred ------CcccccCceEEE-EE---CC--EEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEE
Q 002770 605 ------GQLAEPGFGILG-EV---DG--RLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVG 672 (883)
Q Consensus 605 ------~~~~~~g~g~~~-~~---~g--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a 672 (883)
.+.....+..+. .+ ++ ..++||+++.+.++|....+ .......+ ....+..+|.|++.+|
T Consensus 508 ~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~~~~-~~~~~~~~-------~~~~~a~~GlRtL~~A 579 (1057)
T TIGR01652 508 EYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSSGGN-QVNEETKE-------HLENYASEGLRTLCIA 579 (1057)
T ss_pred EEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhccch-hHHHHHHH-------HHHHHHHcCCcEEEEE
Confidence 011112222222 22 22 46799999999999864211 11111111 2233466788888887
Q ss_pred e-------------------------------------cCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHH
Q 002770 673 R-------------------------------------EGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREE 715 (883)
Q Consensus 673 ~-------------------------------------~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~ 715 (883)
+ .+.+++|+++++|++|++++++|+.||++||++||+|||+.+
T Consensus 580 ~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~ 659 (1057)
T TIGR01652 580 YRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVE 659 (1057)
T ss_pred EEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHH
Confidence 5 144799999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCc------------------------------------------------------------------
Q 002770 716 AVAATAKEVGIGKE------------------------------------------------------------------ 729 (883)
Q Consensus 716 ~a~~ia~~~gi~~~------------------------------------------------------------------ 729 (883)
||.++|+++||-..
T Consensus 660 TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l 739 (1057)
T TIGR01652 660 TAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQL 739 (1057)
T ss_pred HHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHH
Confidence 99999999997210
Q ss_pred ------eEEEecCccchHHHHHHHhhc-CCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHH
Q 002770 730 ------YINSSLTPQQKSEVISTLQTS-GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVV 802 (883)
Q Consensus 730 ------~v~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~ 802 (883)
.++||++|+||.++|+.+|+. |+.|+|+|||.||++||++|||||++.+.++. .|+.+||+++.+ +..+.
T Consensus 740 ~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~-qA~~aaD~~i~~--F~~L~ 816 (1057)
T TIGR01652 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGM-QAVMASDFAIGQ--FRFLT 816 (1057)
T ss_pred HhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHH-HHHHhhhhhhhh--HHHHH
Confidence 279999999999999999998 99999999999999999999999998433332 578999999965 99999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcccCcc-ccHHHHHHHhhhhhHHHHHhhhhc
Q 002770 803 DAL-DLAKATMAKVYQNLSWAVAYNVVAIPIAA-GALLPQYDFA-MTPSLSGGLMALSSIFVVSNSLLL 868 (883)
Q Consensus 803 ~~i-~~~r~~~~~i~~n~~~a~~~n~~~i~la~-~~~~~~~g~~-l~P~~aa~~m~~ssl~v~~nsl~l 868 (883)
+++ .+||.+++++++.+.|.+.-|++.+.+-+ +.++ .++. .+|.....++....+...+.++.+
T Consensus 817 ~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~--~~~s~~~~~~~~~l~~~n~~~t~lp~~~l 883 (1057)
T TIGR01652 817 KLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFY--NGFSGQTLYEGWYMVLYNVFFTALPVISL 883 (1057)
T ss_pred HHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HcCCcHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 987 78999999999999999999986554433 2222 1221 334444445555666666666655
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-60 Score=538.55 Aligned_cols=504 Identities=23% Similarity=0.335 Sum_probs=381.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECC-C
Q 002770 281 PVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLP-G 359 (883)
Q Consensus 281 ~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~-G 359 (883)
++.++.+.+.+-.+.-+..++.+..++++... +..++|+| ||.+++|.++||+|||++.+.+ |
T Consensus 217 A~cI~iisv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R---------------~g~~~ti~S~eLVPGDil~i~~~~ 280 (1140)
T KOG0208|consen 217 AFCIVIISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIR---------------DGFWETVDSSELVPGDILYIPPPG 280 (1140)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEE---------------CCEEEEEeccccccccEEEECCCC
Confidence 44444345555566666666666666665543 34566677 8999999999999999999999 8
Q ss_pred CeeeeeEEEEeeceEEeeccccCCCceeeccCC-------------------Cccccceeee------cCcEEEEEEeec
Q 002770 360 ETIPVDGRVLAGRSVVDESMLSGESLPVFKEEG-------------------FTVSAGTINW------DGPLRIEACSTG 414 (883)
Q Consensus 360 e~IPaDg~vl~G~~~Vdes~LTGEs~pv~K~~g-------------------~~v~aGt~~~------~G~~~~~v~~~g 414 (883)
-..|||++|++|+|.||||||||||+|+.|.+- ..+|.||.++ ++...+.|++||
T Consensus 281 ~~~PcDa~Li~g~civNEsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTG 360 (1140)
T KOG0208|consen 281 KIMPCDALLISGDCIVNESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTG 360 (1140)
T ss_pred eEeecceEEEeCcEEeecccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEecc
Confidence 999999999999999999999999999999763 2478999887 478999999999
Q ss_pred CccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHH
Q 002770 415 SNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSV 494 (883)
Q Consensus 415 ~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 494 (883)
-+|..|++++.+..++....++-+ |.+ .|+....+++++.|++..+... ..|.+....+++++
T Consensus 361 F~T~KGqLVRsilyPkP~~fkfyr--ds~--~fi~~l~~ia~~gfiy~~i~l~-------------~~g~~~~~iiirsL 423 (1140)
T KOG0208|consen 361 FSTTKGQLVRSILYPKPVNFKFYR--DSF--KFILFLVIIALIGFIYTAIVLN-------------LLGVPLKTIIIRSL 423 (1140)
T ss_pred ccccccHHHHhhcCCCCcccHHHH--HHH--HHHHHHHHHHHHHHHHHhHhHH-------------HcCCCHHHHhhhhh
Confidence 999999999999886654443333 332 2333333344444443222111 12344556688999
Q ss_pred HHHhhhcccccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccCCC---hH---
Q 002770 495 DVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYD---ES--- 568 (883)
Q Consensus 495 ~vlvva~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~~~---~~--- 568 (883)
.++.+..|+||+.+....+..+.+|+.|+||.|-+++.+...|++|++|||||||||++.+++..+.+...+ ..
T Consensus 424 DliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~ 503 (1140)
T KOG0208|consen 424 DLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELK 503 (1140)
T ss_pred cEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhh
Confidence 999999999999999999999999999999999999999999999999999999999999999888653110 00
Q ss_pred ----HH----------------HHHHHHh------h----hccCChHHHHHHHHHHhc--------------C-CC----
Q 002770 569 ----EI----------------LKIAAAV------E----KTATHPIAKAIVNKAESL--------------N-LT---- 599 (883)
Q Consensus 569 ----~~----------------l~~~a~~------e----~~s~hPi~~Ai~~~~~~~--------------~-~~---- 599 (883)
+. ..+++++ . ....+|++..+.+..... + ..
T Consensus 504 ~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~ 583 (1140)
T KOG0208|consen 504 VVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVV 583 (1140)
T ss_pred hhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeCCeeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEe
Confidence 00 0111111 0 112355555444322110 0 00
Q ss_pred CCCC--cCcccccC---ceE-------------EEEE--C----CEEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhc
Q 002770 600 SPIT--RGQLAEPG---FGI-------------LGEV--D----GRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQS 655 (883)
Q Consensus 600 ~~~~--~~~~~~~g---~g~-------------~~~~--~----g~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 655 (883)
.|.. .+.....+ .++ +..+ . -..|+||+||.+.+.|....-+.+.++..+.+
T Consensus 584 ~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tvP~dy~evl~~Y---- 659 (1140)
T KOG0208|consen 584 RPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETVPADYQEVLKEY---- 659 (1140)
T ss_pred CCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccCCccHHHHHHHH----
Confidence 0100 01111111 111 1111 1 15789999999999998876666666555444
Q ss_pred ccccCcCCCCCeEEEEEec--------------------CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHH
Q 002770 656 SELASPSNYSKSVVYVGRE--------------------GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREE 715 (883)
Q Consensus 656 ~~~~~~~~~g~~~~~~a~~--------------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~ 715 (883)
..+|.|++.+|.. +.+|+|++.|++++|++++.+|++|.+++|+++|+||||..
T Consensus 660 ------t~~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNll 733 (1140)
T KOG0208|consen 660 ------THQGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLL 733 (1140)
T ss_pred ------HhCCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchh
Confidence 5578999998862 34699999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCC-------------------------------------------------------------------
Q 002770 716 AVAATAKEVGIGK------------------------------------------------------------------- 728 (883)
Q Consensus 716 ~a~~ia~~~gi~~------------------------------------------------------------------- 728 (883)
||..+||+||+-+
T Consensus 734 TaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~ 813 (1140)
T KOG0208|consen 734 TAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQ 813 (1140)
T ss_pred eeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhH
Confidence 9999999999810
Q ss_pred ----------------ceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEE
Q 002770 729 ----------------EYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASII 792 (883)
Q Consensus 729 ----------------~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~v 792 (883)
-.+||||+|+||.++|+.||+.|+.|+|+|||.||+.||++|||||++ ++ ..|.-+|.++
T Consensus 814 ~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISL--Se--aEASvAApFT 889 (1140)
T KOG0208|consen 814 VILEHFPELVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISL--SE--AEASVAAPFT 889 (1140)
T ss_pred HHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcch--hh--hhHhhcCccc
Confidence 068999999999999999999999999999999999999999999999 44 3577789999
Q ss_pred EeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 793 LLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIP 831 (883)
Q Consensus 793 l~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~~~i~ 831 (883)
-...+++.++++|++||+.+-+-...++|...|.++...
T Consensus 890 Sk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFi 928 (1140)
T KOG0208|consen 890 SKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFI 928 (1140)
T ss_pred cCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 888899999999999999999999999999999876543
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-55 Score=544.13 Aligned_cols=523 Identities=19% Similarity=0.211 Sum_probs=380.1
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEE
Q 002770 276 SFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVL 355 (883)
Q Consensus 276 ~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~ 355 (883)
+++...++++++..+++++|++.|+|+++.++ ++.+++++ +|.++++++++|+|||+|.
T Consensus 138 t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N------~~~~~v~~---------------~~~~~~i~~~~i~vGDiv~ 196 (1178)
T PLN03190 138 ASILPLAFVLLVTAVKDAYEDWRRHRSDRIEN------NRLAWVLV---------------DDQFQEKKWKDIRVGEIIK 196 (1178)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhc------CcEEEEEE---------------CCeEEEEeHHHCCCCCEEE
Confidence 34456677888888999999999999988764 45677777 7889999999999999999
Q ss_pred ECCCCeeeeeEEEEe-----eceEEeeccccCCCceeeccCCCc------------------------------------
Q 002770 356 VLPGETIPVDGRVLA-----GRSVVDESMLSGESLPVFKEEGFT------------------------------------ 394 (883)
Q Consensus 356 v~~Ge~IPaDg~vl~-----G~~~Vdes~LTGEs~pv~K~~g~~------------------------------------ 394 (883)
|++||+|||||+|++ |.+.|||+.|||||.|+.|.+++.
T Consensus 197 v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~ 276 (1178)
T PLN03190 197 IQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGK 276 (1178)
T ss_pred ECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCC
Confidence 999999999999997 889999999999999999976521
Q ss_pred ---------cccceeeecC-cEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHH
Q 002770 395 ---------VSAGTINWDG-PLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYY 464 (883)
Q Consensus 395 ---------v~aGt~~~~G-~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~ 464 (883)
++.|+.+.+. .+.+.|++||.+|. ++.....+..+++++++..+++..+++.+.++++++..++..+
T Consensus 277 ~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~ 353 (1178)
T PLN03190 277 RLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAV 353 (1178)
T ss_pred cccCCccceeeccceecCCceEEEEEEEechhhh---HhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2233333332 58999999999996 4444444557889999999999888776666666555444322
Q ss_pred HhcCc------ccchhccccCCC---C----C--chHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHhc------
Q 002770 465 IGSQI------FPDVLLSDMAGP---N----G--NPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQ------ 523 (883)
Q Consensus 465 ~~~~~------~~~~~~~~~~~~---~----~--~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~~------ 523 (883)
+.... .+++........ . + ...+..+...+.++-..+|.+|...+.+........+.+.
T Consensus 354 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~ 433 (1178)
T PLN03190 354 WLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDE 433 (1178)
T ss_pred hhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccc
Confidence 21100 011100000000 0 0 0112334444556668899999998888875534444332
Q ss_pred ----CceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccC--C-------------------------------C
Q 002770 524 ----GLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV--Y-------------------------------D 566 (883)
Q Consensus 524 ----gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~--~-------------------------------~ 566 (883)
++.+|+.+..|+||+|++||+|||||||+|+|.+.++...+ | +
T Consensus 434 ~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (1178)
T PLN03190 434 ASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVD 513 (1178)
T ss_pred cCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCC
Confidence 37899999999999999999999999999999999874310 0 0
Q ss_pred -------------h-----HHHH---HHHHHh-----h-----------hccCChHHHHHHHHHHhcCCCCCCC------
Q 002770 567 -------------E-----SEIL---KIAAAV-----E-----------KTATHPIAKAIVNKAESLNLTSPIT------ 603 (883)
Q Consensus 567 -------------~-----~~~l---~~~a~~-----e-----------~~s~hPi~~Ai~~~~~~~~~~~~~~------ 603 (883)
+ .+++ .++..+ + ..+.+|.+.|++.+|+..|+.+...
T Consensus 514 ~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~ 593 (1178)
T PLN03190 514 PQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIV 593 (1178)
T ss_pred HHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEE
Confidence 0 0111 112111 1 2345899999999999988631110
Q ss_pred -------------cCcccccCceEEEEE----CC--EEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCC
Q 002770 604 -------------RGQLAEPGFGILGEV----DG--RLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNY 664 (883)
Q Consensus 604 -------------~~~~~~~g~g~~~~~----~g--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (883)
..++..+.+..+..+ ++ ..++||+++.|.++|.............+. ...++.+
T Consensus 594 i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~-------l~~~a~~ 666 (1178)
T PLN03190 594 IDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAH-------LHTYSSL 666 (1178)
T ss_pred EeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccccchhHHHHHHH-------HHHHHhc
Confidence 011222233333332 22 467999999999998653222211222222 2234566
Q ss_pred CCeEEEEEe-------------------------------------cCceEEEEEEecCCCChhHHHHHHHHHHCCCEEE
Q 002770 665 SKSVVYVGR-------------------------------------EGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTL 707 (883)
Q Consensus 665 g~~~~~~a~-------------------------------------~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~ 707 (883)
|.|++.+|+ .++.++|+++++|++|++++++|+.|+++|++++
T Consensus 667 GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~ 746 (1178)
T PLN03190 667 GLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVW 746 (1178)
T ss_pred CCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEE
Confidence 777777663 2456899999999999999999999999999999
Q ss_pred EEcCCcHHHHHHHHHHcCCC------------------------------------------------------------
Q 002770 708 LLSGDREEAVAATAKEVGIG------------------------------------------------------------ 727 (883)
Q Consensus 708 ~lTGd~~~~a~~ia~~~gi~------------------------------------------------------------ 727 (883)
|+|||+..+|.++|+.+||-
T Consensus 747 mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~ 826 (1178)
T PLN03190 747 VLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTS 826 (1178)
T ss_pred EECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHH
Confidence 99999999999999977661
Q ss_pred -----C---------------ceEEEecCccchHHHHHHHhhc-CCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHH
Q 002770 728 -----K---------------EYINSSLTPQQKSEVISTLQTS-GHHVAMVGDGINDAPSLALADVGIALQIEAQENAAS 786 (883)
Q Consensus 728 -----~---------------~~v~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~ 786 (883)
+ ..++||++|+||.++|+.+|+. ++.|+|+|||.||++||++|||||++.|.+|. .|.
T Consensus 827 L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~-qA~ 905 (1178)
T PLN03190 827 LVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGR-QAV 905 (1178)
T ss_pred HHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhH-HHH
Confidence 0 0268999999999999999997 57899999999999999999999998655555 577
Q ss_pred hhcCEEEeCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 787 TAASIILLGNKLSQVVDALD-LAKATMAKVYQNLSWAVAYNVVAIPI 832 (883)
Q Consensus 787 ~~ad~vl~~~~~~~l~~~i~-~~r~~~~~i~~n~~~a~~~n~~~i~l 832 (883)
.+||+.+.. |..|.+++- +||..|+++-+-+.|.+.-|++.+..
T Consensus 906 ~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~ 950 (1178)
T PLN03190 906 MASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLV 950 (1178)
T ss_pred Hhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999955 999998777 69999999999999999999865544
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-50 Score=448.26 Aligned_cols=436 Identities=23% Similarity=0.266 Sum_probs=319.6
Q ss_pred HHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECC---CCeeeeeEEEEeece
Q 002770 297 RARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLP---GETIPVDGRVLAGRS 373 (883)
Q Consensus 297 ~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~---Ge~IPaDg~vl~G~~ 373 (883)
++|.|+...++. +..-|.+..++| +++|+.+.++||.|||+|.|.. ...||||.+++.|.|
T Consensus 236 ~Qrm~~lse~R~-Mg~kpy~I~v~R---------------~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL~Gsc 299 (1160)
T KOG0209|consen 236 KQRMRTLSEFRT-MGNKPYTINVYR---------------NKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLLRGSC 299 (1160)
T ss_pred HHHHHHHHHHHh-cCCCceEEEEEe---------------cCcceeccccccCCCceEEeccCcccCcCCceEEEEecce
Confidence 455555444443 233455566666 8999999999999999999998 457999999999999
Q ss_pred EEeeccccCCCceeeccC-------------CC----ccccceeee-------------cCcEEEEEEeecCccchhhhh
Q 002770 374 VVDESMLSGESLPVFKEE-------------GF----TVSAGTINW-------------DGPLRIEACSTGSNSMISKIV 423 (883)
Q Consensus 374 ~Vdes~LTGEs~pv~K~~-------------g~----~v~aGt~~~-------------~G~~~~~v~~~g~~T~~~~i~ 423 (883)
.|||+||||||.|..|++ +| .+|+||.+. +|.+.+.|.+||.+|..|+++
T Consensus 300 iVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLv 379 (1160)
T KOG0209|consen 300 IVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLV 379 (1160)
T ss_pred eechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCcee
Confidence 999999999999999976 11 479999886 688999999999999999999
Q ss_pred hhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhccc
Q 002770 424 SMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPC 503 (883)
Q Consensus 424 ~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~ 503 (883)
|.+-...++-+.- |+-+.+|+.+.++++++. .||.|....- .....-.+-+.-.+-++...+|.
T Consensus 380 Rtilf~aervTaN----n~Etf~FILFLlVFAiaA--a~Yvwv~Gsk----------d~~RsrYKL~LeC~LIlTSVvPp 443 (1160)
T KOG0209|consen 380 RTILFSAERVTAN----NRETFIFILFLLVFAIAA--AGYVWVEGSK----------DPTRSRYKLFLECTLILTSVVPP 443 (1160)
T ss_pred eeEEecceeeeec----cHHHHHHHHHHHHHHHHh--hheEEEeccc----------CcchhhhheeeeeeEEEeccCCC
Confidence 9887755544432 222233443333333332 2332211100 00011222344455566777899
Q ss_pred ccchhHHHHHHHHHHHHHhcCceecCchHHhhhccCcEEEecCcccccCCceEEEEEeccCCC-----------hH--HH
Q 002770 504 ALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYD-----------ES--EI 570 (883)
Q Consensus 504 aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~~~-----------~~--~~ 570 (883)
-|++-..+|+-..+..++|.||.|..+-.+.-.|++|.+|||||||||+..|.|.++.....+ .+ .+
T Consensus 444 ELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~~~~s~~p~~t~~v 523 (1160)
T KOG0209|consen 444 ELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGALTPASKAPNETVLV 523 (1160)
T ss_pred CCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccccchhhCCchHHHH
Confidence 999988888888888899999999999999999999999999999999999999998652111 11 23
Q ss_pred HHHHHHh---h-hccCChHHHHHHHHHHhcCCCCCCCcCcccccCceE-----------------EEEEC-------CEE
Q 002770 571 LKIAAAV---E-KTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGI-----------------LGEVD-------GRL 622 (883)
Q Consensus 571 l~~~a~~---e-~~s~hPi~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~-----------------~~~~~-------g~~ 622 (883)
++-++++ | .-..+|+++|.++...+. +............++++ .+..+ -..
T Consensus 524 lAscHsLv~le~~lVGDPlEKA~l~~v~W~-~~k~~~v~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~ 602 (1160)
T KOG0209|consen 524 LASCHSLVLLEDKLVGDPLEKATLEAVGWN-LEKKNSVCPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFV 602 (1160)
T ss_pred HHHHHHHHHhcCcccCChHHHHHHHhcCcc-cccCcccCCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEE
Confidence 4444443 2 345799999999876331 11000000011111111 11111 123
Q ss_pred EEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEec--------------------CceEEEEE
Q 002770 623 VAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGRE--------------------GEGIIGAI 682 (883)
Q Consensus 623 ~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~--------------------~~~~lG~i 682 (883)
..||+||.+.++..+.+. +.+ +.+.+ +..+|.+++++++. ++.|.|++
T Consensus 603 aVKGAPEvi~~ml~dvP~--dY~---~iYk~-------ytR~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFl 670 (1160)
T KOG0209|consen 603 AVKGAPEVIQEMLRDVPK--DYD---EIYKR-------YTRQGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFL 670 (1160)
T ss_pred EecCCHHHHHHHHHhCch--hHH---HHHHH-------HhhccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeE
Confidence 479999999998876543 222 22222 35678888888862 34699999
Q ss_pred EecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC----------------------------------
Q 002770 683 AISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK---------------------------------- 728 (883)
Q Consensus 683 ~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~---------------------------------- 728 (883)
.|..|+|+|++++|+.|++.+++++|+||||+.||.++|+++||..
T Consensus 671 if~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~ 750 (1160)
T KOG0209|consen 671 IFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGK 750 (1160)
T ss_pred EEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCc
Confidence 9999999999999999999999999999999999999999999810
Q ss_pred ---------------------------------ceEEEecCccchHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEE
Q 002770 729 ---------------------------------EYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIA 775 (883)
Q Consensus 729 ---------------------------------~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa 775 (883)
..+|||+.|.||..+|..|++.|+.++|+|||.||+.||++||||||
T Consensus 751 ~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVA 830 (1160)
T KOG0209|consen 751 KKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVA 830 (1160)
T ss_pred cchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhccccee
Confidence 15899999999999999999999999999999999999999999999
Q ss_pred ee
Q 002770 776 LQ 777 (883)
Q Consensus 776 ~~ 777 (883)
+-
T Consensus 831 LL 832 (1160)
T KOG0209|consen 831 LL 832 (1160)
T ss_pred hh
Confidence 84
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-45 Score=405.63 Aligned_cols=487 Identities=22% Similarity=0.284 Sum_probs=350.8
Q ss_pred cCccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCC
Q 002770 273 WDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGD 352 (883)
Q Consensus 273 ~~~~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GD 352 (883)
+..+|+....+++++.++.+++|++.|.+..+..++ +.-++.. |||...+ |+++|++||
T Consensus 127 ~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Ns------e~y~~lt--------------r~~~~~~-~Ss~i~vGD 185 (1051)
T KOG0210|consen 127 YLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNS------EKYTKLT--------------RDGTRRE-PSSDIKVGD 185 (1051)
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhheeec--------------cCCcccc-ccccccccc
Confidence 345677778889999999999999999887776654 2222322 1444333 999999999
Q ss_pred EEEECCCCeeeeeEEEE-----eeceEEeeccccCCCceeeccC------------------------------------
Q 002770 353 SVLVLPGETIPVDGRVL-----AGRSVVDESMLSGESLPVFKEE------------------------------------ 391 (883)
Q Consensus 353 iV~v~~Ge~IPaDg~vl-----~G~~~Vdes~LTGEs~pv~K~~------------------------------------ 391 (883)
+|++..+++||||.+++ +|++.|-+..|+||+.++.|-|
T Consensus 186 vi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~ 265 (1051)
T KOG0210|consen 186 VIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTI 265 (1051)
T ss_pred EEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEE
Confidence 99999999999999999 4789999999999998887722
Q ss_pred -----------CCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHH
Q 002770 392 -----------GFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFA 460 (883)
Q Consensus 392 -----------g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~ 460 (883)
.+.++|+|++.+|.+.+.|++||.+|.-. + .-..++.+-..++..++.+.+.+...+++++++...
T Consensus 266 ~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRsv--M-Nts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~ 342 (1051)
T KOG0210|consen 266 TDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRSV--M-NTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVA 342 (1051)
T ss_pred ecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHHH--h-ccCCcccccceeeeecccHHHHHHHHHHHHHHHHHH
Confidence 24689999999999999999999998532 1 112233344455666777777777777777665433
Q ss_pred HHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHHHh----cCceecCchHHhhh
Q 002770 461 FWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAK----QGLLIRGGDVLERL 536 (883)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~a~----~gilvk~~~~lE~l 536 (883)
.- ..+..|...+.+++.++...+|..|-.-.-++-..-.....+ .|.++|+....|+|
T Consensus 343 ~~------------------g~~~~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeL 404 (1051)
T KOG0210|consen 343 MK------------------GFGSDWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEEL 404 (1051)
T ss_pred hh------------------cCCCchHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHh
Confidence 21 122445566888888888888998877777776554444432 48899999999999
Q ss_pred ccCcEEEecCcccccCCceEEEEEecc--CCChH---HHH------------------------------------HHHH
Q 002770 537 ARIDYLALDKTGTLTEGKPAVFNVASF--VYDES---EIL------------------------------------KIAA 575 (883)
Q Consensus 537 g~v~~i~fDKTGTLT~~~~~v~~v~~~--~~~~~---~~l------------------------------------~~~a 575 (883)
|+|.++.+|||||||+|+|.+++++.. .++.+ ++- ++++
T Consensus 405 GRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCH 484 (1051)
T KOG0210|consen 405 GRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCH 484 (1051)
T ss_pred cceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhc
Confidence 999999999999999999999988543 22211 111 1111
Q ss_pred H----------hhhccCChHHHHHHHHHHhcCCCCCC------------Cc----------Ccc-cccCceEEEEEC--C
Q 002770 576 A----------VEKTATHPIAKAIVNKAESLNLTSPI------------TR----------GQL-AEPGFGILGEVD--G 620 (883)
Q Consensus 576 ~----------~e~~s~hPi~~Ai~~~~~~~~~~~~~------------~~----------~~~-~~~g~g~~~~~~--g 620 (883)
. +.+.+.+|.+.||+++.+..|+.+.. .. .+. +....|+....+ +
T Consensus 485 NVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~ 564 (1051)
T KOG0210|consen 485 NVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTE 564 (1051)
T ss_pred cCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCc
Confidence 1 11234466677777666655543110 00 000 111234433333 2
Q ss_pred --EEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEec------------------------
Q 002770 621 --RLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGRE------------------------ 674 (883)
Q Consensus 621 --~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~------------------------ 674 (883)
..+.||+...|...-...+ +. .++-..++.+|.+.+.+|..
T Consensus 565 evtfylKGAD~VMs~iVq~Nd----------Wl---eEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR 631 (1051)
T KOG0210|consen 565 EVTFYLKGADVVMSGIVQYND----------WL---EEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDR 631 (1051)
T ss_pred eEEEEEecchHHHhcccccch----------hh---hhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchH
Confidence 3568898766643222111 11 11122234566666666651
Q ss_pred --------------CceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC-------------
Q 002770 675 --------------GEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG------------- 727 (883)
Q Consensus 675 --------------~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~------------- 727 (883)
+..++|+.+.||+++++++.+++.||++|||+||+|||..++|..+|+..++-
T Consensus 632 ~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~ 711 (1051)
T KOG0210|consen 632 DQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVT 711 (1051)
T ss_pred HHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecC
Confidence 22489999999999999999999999999999999999999999999999871
Q ss_pred ---------------------------------------------CceEEEecCccchHHHHHHHhhc-CCeEEEEcCCc
Q 002770 728 ---------------------------------------------KEYINSSLTPQQKSEVISTLQTS-GHHVAMVGDGI 761 (883)
Q Consensus 728 ---------------------------------------------~~~v~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~ 761 (883)
...++||++|+||+++++.+|+. |.+|++||||.
T Consensus 712 sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGG 791 (1051)
T KOG0210|consen 712 SRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGG 791 (1051)
T ss_pred CchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCC
Confidence 11588999999999999999986 88999999999
Q ss_pred cCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHH-HHHHHHHHHH
Q 002770 762 NDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDL-AKATMAKVYQ 817 (883)
Q Consensus 762 ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~-~r~~~~~i~~ 817 (883)
||+.|+++||+||++-+.+|. .|.-+||+-+.. ++.+.+++-+ ||..|++--+
T Consensus 792 NDVsMIq~A~~GiGI~gkEGk-QASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~ 845 (1051)
T KOG0210|consen 792 NDVSMIQAADVGIGIVGKEGK-QASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAK 845 (1051)
T ss_pred ccchheeecccceeeeccccc-ccchhccccHHH--HHHHHHHhhccccchHHHHHH
Confidence 999999999999999766665 466789998865 9999988776 8888876443
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=390.80 Aligned_cols=521 Identities=18% Similarity=0.215 Sum_probs=374.4
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccceEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEE
Q 002770 276 SFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVL 355 (883)
Q Consensus 276 ~~f~~~~~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~ 355 (883)
+.....++++.+..+.+.+|++.|.+.++.++. .++.+.+. ++..++...++|++||+|.
T Consensus 82 ~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN~------~~~~v~~~--------------~~~~~~~~wk~~~vGd~v~ 141 (1151)
T KOG0206|consen 82 TTLVPLLFVLGITAIKDAIEDYRRHKQDKEVNN------RKVEVLRG--------------DGCFVEKKWKDVRVGDIVR 141 (1151)
T ss_pred ceeeceeeeehHHHHHHHHhhhhhhhccHHhhc------ceeEEecC--------------CceeeeeccceeeeeeEEE
Confidence 334455677778889999999999998887765 35566652 2237899999999999999
Q ss_pred ECCCCeeeeeEEEEe-----eceEEeeccccCCCceeeccC---------------------------------------
Q 002770 356 VLPGETIPVDGRVLA-----GRSVVDESMLSGESLPVFKEE--------------------------------------- 391 (883)
Q Consensus 356 v~~Ge~IPaDg~vl~-----G~~~Vdes~LTGEs~pv~K~~--------------------------------------- 391 (883)
+..+|.+|||.++++ |.|+|++++|+||+..+.|+.
T Consensus 142 v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~ 221 (1151)
T KOG0206|consen 142 VEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQ 221 (1151)
T ss_pred eccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeec
Confidence 999999999999995 669999999999998887742
Q ss_pred --------CCccccceeeecCc-EEEEEEeecCccchhhhhhhhHhhhCCCChhHHHHHHhchhHHHHHHHHHHHHHHHH
Q 002770 392 --------GFTVSAGTINWDGP-LRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFW 462 (883)
Q Consensus 392 --------g~~v~aGt~~~~G~-~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~~q~~~d~~~~~~~~~vl~~~~~~~~~~ 462 (883)
.+.++.|+.+.+.. +.+.|+.+|.+|.+. +....+..+++++++..++....++.+.++++++..+..
T Consensus 222 ~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~~---~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~ 298 (1151)
T KOG0206|consen 222 GQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKLM---QNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGF 298 (1151)
T ss_pred cCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchHH---HhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhh
Confidence 11255677777654 788999999999554 455557788999999999887777666666555544432
Q ss_pred HHHhc---CcccchhccccCCC-CCchHHHHHHHHHHHHhhhcccccchhHHHHHHHHHHHH----------HhcCceec
Q 002770 463 YYIGS---QIFPDVLLSDMAGP-NGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLG----------AKQGLLIR 528 (883)
Q Consensus 463 ~~~~~---~~~~~~~~~~~~~~-~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~----------a~~gilvk 528 (883)
.++.. ...+..+.. ... ........+..++.++...+|..|-..+-+.-....... ......+|
T Consensus 299 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~r 376 (1151)
T KOG0206|consen 299 AIWTRQDGRHNGEWWYL--SPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQAR 376 (1151)
T ss_pred heeeeecccccCchhhh--cCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccc
Confidence 22221 111111110 111 111234556777788888899999877665544332221 24578899
Q ss_pred CchHHhhhccCcEEEecCcccccCCceEEEEEeccC------CCh-----------------------------------
Q 002770 529 GGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV------YDE----------------------------------- 567 (883)
Q Consensus 529 ~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~v~~~~------~~~----------------------------------- 567 (883)
+.+.-|.||+|++|+.|||||||+|.|.+.++...+ .++
T Consensus 377 tsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~ 456 (1151)
T KOG0206|consen 377 TSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSS 456 (1151)
T ss_pred cCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccchhhcccccc
Confidence 999999999999999999999999999998874431 000
Q ss_pred -------HH---HHHHHHH-----------hhhccCChHHHHHHHHHHhcCCCCCCC-cCcccccCce------------
Q 002770 568 -------SE---ILKIAAA-----------VEKTATHPIAKAIVNKAESLNLTSPIT-RGQLAEPGFG------------ 613 (883)
Q Consensus 568 -------~~---~l~~~a~-----------~e~~s~hPi~~Ai~~~~~~~~~~~~~~-~~~~~~~g~g------------ 613 (883)
.+ .++++.. +.+.+..|.+.|+++.|++.|+..... .+.....+.|
T Consensus 457 ~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLe 536 (1151)
T KOG0206|consen 457 EPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLE 536 (1151)
T ss_pred ccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEec
Confidence 01 1222221 233467899999999999988764221 1111111222
Q ss_pred -------EEEEE---CC--EEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEe--------
Q 002770 614 -------ILGEV---DG--RLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGR-------- 673 (883)
Q Consensus 614 -------~~~~~---~g--~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~-------- 673 (883)
++..+ +| ..++||+...+.+++....... ..... .+...++.+|.+.+++|+
T Consensus 537 F~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~~~~~~-~e~T~-------~Hl~~yA~eGLRTLc~A~r~l~e~eY 608 (1151)
T KOG0206|consen 537 FNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSKNGEKL-REKTQ-------EHLEEYATEGLRTLCLAYRELDEEEY 608 (1151)
T ss_pred cccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhhcchHH-HHHHH-------HHHHHHHhhhhhHhhhhhhccCHHHH
Confidence 11111 12 4689999999999987522111 11111 122334566777777765
Q ss_pred -----------------------------cCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc
Q 002770 674 -----------------------------EGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEV 724 (883)
Q Consensus 674 -----------------------------~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~ 724 (883)
+++.++|..++||+++++++++|+.|+++|||+||+|||..+||..++-.|
T Consensus 609 ~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC 688 (1151)
T KOG0206|consen 609 EEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSC 688 (1151)
T ss_pred HHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhh
Confidence 345689999999999999999999999999999999999999999999888
Q ss_pred CCC------------C-----------------------------------c----------------------------
Q 002770 725 GIG------------K-----------------------------------E---------------------------- 729 (883)
Q Consensus 725 gi~------------~-----------------------------------~---------------------------- 729 (883)
++- . .
T Consensus 689 ~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~ 768 (1151)
T KOG0206|consen 689 RLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKR 768 (1151)
T ss_pred cCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHh
Confidence 761 0 0
Q ss_pred ---eEEEecCccchHHHHHHHhh-cCCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHH
Q 002770 730 ---YINSSLTPQQKSEVISTLQT-SGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 730 ---~v~~~~~p~~K~~~v~~l~~-~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i 805 (883)
.++||++|.||+.+++..++ .+..+++||||.||++|++.|||||+++|.+|.+ |..++|+-+.. +.-+.+++
T Consensus 769 C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQ-AvmsSD~AIaq--FrfL~rLL 845 (1151)
T KOG0206|consen 769 CKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQ-AVMSSDFAIAQ--FRFLERLL 845 (1151)
T ss_pred cCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhh-hhhcccchHHH--HHHHhhhh
Confidence 46889999999999999974 4789999999999999999999999998767764 55788887755 55555543
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 806 -DLAKATMAKVYQNLSWAVAYNVVAIPI 832 (883)
Q Consensus 806 -~~~r~~~~~i~~n~~~a~~~n~~~i~l 832 (883)
-+||..|.++.+.+.+.+..|+.....
T Consensus 846 LVHGhW~Y~R~a~~ilyfFYKNi~f~~~ 873 (1151)
T KOG0206|consen 846 LVHGHWSYIRLAKMILYFFYKNIAFTFT 873 (1151)
T ss_pred eeecceeHHHHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999865544
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=302.94 Aligned_cols=223 Identities=27% Similarity=0.502 Sum_probs=200.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc-eEEEEcCCCCCCCCCccccCCCeEEEeeCCCcCCCCEEEECCCCe
Q 002770 283 MLLGFVLLGRSLEERARIRASSDMNELLSLVSTQ-SRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGET 361 (883)
Q Consensus 283 ~ll~~~~~g~~le~~~~~ra~~~~~~l~~~~~~~-~~v~~~~~~~~~~~~~~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~ 361 (883)
+++++++++.+++.+.+.|+.+.+++|.+..+++ ++++| ||++++++++||+|||+|.+++||+
T Consensus 1 ~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r---------------~~~~~~i~~~~L~~GDiI~l~~g~~ 65 (230)
T PF00122_consen 1 VILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIR---------------DGRWQKIPSSELVPGDIIILKAGDI 65 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEE---------------TTEEEEEEGGGT-TTSEEEEETTEB
T ss_pred CEEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEe---------------ccccccchHhhccceeeeecccccc
Confidence 4677888999999999999999999999988887 77777 8999999999999999999999999
Q ss_pred eeeeEEEEe-eceEEeeccccCCCceeecc-----CCCccccceeeecCcEEEEEEeecCccchhhhhhhhHhhhCCCCh
Q 002770 362 IPVDGRVLA-GRSVVDESMLSGESLPVFKE-----EGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAP 435 (883)
Q Consensus 362 IPaDg~vl~-G~~~Vdes~LTGEs~pv~K~-----~g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~i~~~v~~~~~~~~~ 435 (883)
+||||+|++ |.+.||||.+|||+.|+.|. .|+.+++||.+.+|.+.++|+++|.+|.++++.+.+.+.+.++++
T Consensus 66 vPaD~~ll~~g~~~vd~s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~ 145 (230)
T PF00122_consen 66 VPADGILLESGSAYVDESALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSP 145 (230)
T ss_dssp ESSEEEEEESSEEEEECHHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-TH
T ss_pred cccCccceeccccccccccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchh
Confidence 999999999 99999999999999999999 999999999999999999999999999999999999998888899
Q ss_pred hHHHHHHhchhHHHHHHHHHHHHHHHHHHHhcCcccchhccccCCCCCchHHHHHHHHHHHHhhhcccccchhHHHHHHH
Q 002770 436 IQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILV 515 (883)
Q Consensus 436 ~q~~~d~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~ 515 (883)
+++..+++..++++++++++++++++|++.. ....+...+..++++++++|||+|++++|+++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~ 210 (230)
T PF00122_consen 146 LERKLNKIAKILIIIILAIAILVFIIWFFND---------------SGISFFKSFLFAISLLIVLIPCALPLALPLSLAI 210 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHTGS---------------TTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHhcccccchhhhccceecc---------------cccccccccccccceeeeecccceeehHHHHHHH
Confidence 9999999999999999888888877666531 1233456688899999999999999999999999
Q ss_pred HHHHHHhcCceecCchHHhh
Q 002770 516 GTSLGAKQGLLIRGGDVLER 535 (883)
Q Consensus 516 ~~~~~a~~gilvk~~~~lE~ 535 (883)
+..+++++|+++|+++++|.
T Consensus 211 ~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 211 AARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHHHHTTEEESSTTHHHH
T ss_pred HHHHHHHCCEEEeCcccccC
Confidence 99999999999999999995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=252.70 Aligned_cols=211 Identities=36% Similarity=0.511 Sum_probs=172.4
Q ss_pred CcEEEecCcccccCCceEEEEEeccCCChHHHHHHHHHhhhccCChHHHHHHHHHHhcCCCCCCCcCcccccCceEEEEE
Q 002770 539 IDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEV 618 (883)
Q Consensus 539 v~~i~fDKTGTLT~~~~~v~~v~~~~~~~~~~l~~~a~~e~~s~hPi~~Ai~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 618 (883)
|++||||||||||++++.+ .. .....++.++...++.+.||++.++..++...... +....+...+|.|+.+.+
T Consensus 1 i~~i~fDktGTLt~~~~~v---~~--~~~~~~~~~~~~~~~~s~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 74 (215)
T PF00702_consen 1 IDAICFDKTGTLTQGKMSV---AP--PSNEAALAIAAALEQGSEHPIGKAIVEFAKNHQWS-KSLESFSEFIGRGISGDV 74 (215)
T ss_dssp ESEEEEECCTTTBESHHEE---ES--CSHHHHHHHHHHHHCTSTSHHHHHHHHHHHHHHHH-SCCEEEEEETTTEEEEEE
T ss_pred CeEEEEecCCCcccCeEEE---Ee--ccHHHHHHHHHHhhhcCCCcchhhhhhhhhhccch-hhhhhheeeeeccccccc
Confidence 6899999999999999999 11 56788999999999999999999999988763211 115567788899999998
Q ss_pred CCEEEEecCHHHHHHHhhccCCCchhhhHHHHHhhhcccccCcCCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHH
Q 002770 619 DGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRS 698 (883)
Q Consensus 619 ~g~~~~~Gs~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~ 698 (883)
++. +. |+++++.+......... ...... ...+.+.+.++.+.. ++|.+.+.|++|++++++|++
T Consensus 75 ~~~-~~-g~~~~~~~~~~~~~~~~---~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~~ 138 (215)
T PF00702_consen 75 DGI-YL-GSPEWIHELGIRVISPD---LVEEIQ----------ESQGRTVIVLAVNLI-FLGLFGLRDPLRPGAKEALQE 138 (215)
T ss_dssp HCH-EE-HHHHHHHHHHHHHHHHH---HHHHHH----------HHHHHHCEEEEESHE-EEEEEEEEEEBHTTHHHHHHH
T ss_pred ccc-cc-ccchhhhhccccccccc---hhhhHH----------HhhCCcccceeecCe-EEEEEeecCcchhhhhhhhhh
Confidence 877 44 99999887654321000 000000 122334455555555 999999999999999999999
Q ss_pred HHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEec--Cccch--HHHHHHHhhcCCeEEEEcCCccCHHHHHhCC
Q 002770 699 LQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSL--TPQQK--SEVISTLQTSGHHVAMVGDGINDAPSLALAD 771 (883)
Q Consensus 699 L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~--~p~~K--~~~v~~l~~~g~~v~~vGDg~ND~~al~~Ad 771 (883)
|+++|++++|+|||+..++..+++++||.+..++++. +|++| .++++.|+.+++.|+|||||.||++|+++||
T Consensus 139 L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 139 LKEAGIKVAILTGDNESTASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHTTEEEEEEESSEHHHHHHHHHHTTSCSEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred hhccCcceeeeeccccccccccccccccccccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 9999999999999999999999999999877799999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.67 E-value=6.6e-16 Score=138.90 Aligned_cols=124 Identities=27% Similarity=0.419 Sum_probs=111.9
Q ss_pred EEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhcCCeEEEE
Q 002770 678 IIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 678 ~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~g~~v~~v 757 (883)
+.+.++---++=++++++|++|++. +++++.|||...+....|+-+||+.+.+++...|+.|.++++.|++.+++|+||
T Consensus 21 v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k~vmV 99 (152)
T COG4087 21 VLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKRYEKVVMV 99 (152)
T ss_pred EEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceeeeecccCHHHHHHHHHHhcCCCcEEEEe
Confidence 7888888889999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccCHHHHHhCCeeEEeec-CCccHHHHhhcCEEEeCCChhhHHHH
Q 002770 758 GDGINDAPSLALADVGIALQI-EAQENAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 758 GDg~ND~~al~~AdvgIa~~~-~~~~~~a~~~ad~vl~~~~~~~l~~~ 804 (883)
|||.||.+||+.||+||..-+ .+.+..+.++||+++.+ +..+.++
T Consensus 100 GnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 100 GNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred cCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 999999999999999998743 35667788999999855 4444443
|
|
| >PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.3e-11 Score=99.01 Aligned_cols=62 Identities=27% Similarity=0.521 Sum_probs=59.2
Q ss_pred EEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCc
Q 002770 75 LLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFE 145 (883)
Q Consensus 75 ~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~ 145 (883)
+|.|+||+|++|+++|+++|.++|||.++++|+.++++.|.|+++. .+++++.++|+++||+
T Consensus 1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~---------~~~~~i~~~i~~~Gy~ 62 (62)
T PF00403_consen 1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDK---------TSIEKIIEAIEKAGYE 62 (62)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTT---------SCHHHHHHHHHHTTSE
T ss_pred CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCC---------CCHHHHHHHHHHhCcC
Confidence 5899999999999999999999999999999999999999999887 6889999999999995
|
These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A .... |
| >COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.5e-11 Score=98.92 Aligned_cols=68 Identities=28% Similarity=0.483 Sum_probs=63.3
Q ss_pred eEEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCcccc
Q 002770 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKR 148 (883)
Q Consensus 72 ~~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~ 148 (883)
.+..++|+||+|.+|+..|+++|++++||.++++++..+++.|.+++.. .+.+++.+++++.||++..
T Consensus 2 ~~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~---------~~~~~i~~ai~~aGy~~~~ 69 (71)
T COG2608 2 MKTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNK---------VDIEAIIEAIEDAGYKVEE 69 (71)
T ss_pred ceEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCc---------CCHHHHHHHHHHcCCCeee
Confidence 4578999999999999999999999999999999999999999999976 6899999999999998753
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.6e-10 Score=115.26 Aligned_cols=116 Identities=16% Similarity=0.121 Sum_probs=98.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEE--------e-------cCccchHHHHHHHhhcC
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINS--------S-------LTPQQKSEVISTLQTSG 751 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~--------~-------~~p~~K~~~v~~l~~~g 751 (883)
++.|++.+.|+.+|+.| +++++||.....+..+++++|++ .+++ + ..+++|..+++.+++.|
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~--~~~an~l~~~~~g~~tG~~~~~~~~K~~~l~~l~~~~ 144 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFP--TLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLY 144 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCc--hhhceeeEEecCCeeECeeecCcchHHHHHHHHHhhC
Confidence 57999999999999975 99999999999999999999996 3332 1 34678999999998888
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHH
Q 002770 752 HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLA 808 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~ 808 (883)
..+.|+|||.||.+|++.||+||++ ++.+..++.||=+-.-.+.+.+..++.++
T Consensus 145 ~~~v~vGDs~nDl~ml~~Ag~~ia~---~ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 145 YRVIAAGDSYNDTTMLSEAHAGILF---HAPENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred CCEEEEeCCHHHHHHHHhCCCCEEe---cCCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 8899999999999999999999999 45667777777655556788888887776
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=8.1e-10 Score=121.09 Aligned_cols=115 Identities=22% Similarity=0.271 Sum_probs=99.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEe-----------------cCccchHHHHHHHhh
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS-----------------LTPQQKSEVISTLQT 749 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~~l~~ 749 (883)
++.|++.+.++.|++.|+++.++||.....+..+.+++|++ .++++ +..+.|.+.++.+.+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld--~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~ 258 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD--AAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQ 258 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC--eEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHH
Confidence 47899999999999999999999999988899999999996 33321 234679988888865
Q ss_pred c-C---CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 750 S-G---HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 750 ~-g---~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
+ | +.+++||||.||.+|++.|++|||+ ++.+..++.||.++..++++++..++.
T Consensus 259 ~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~---nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 259 EYEIPLAQTVAIGDGANDLPMIKAAGLGIAY---HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred HcCCChhhEEEEECCHHHHHHHHHCCCeEEe---CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 4 3 6899999999999999999999999 678899999999999999999987754
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=2.2e-09 Score=100.87 Aligned_cols=114 Identities=22% Similarity=0.336 Sum_probs=94.7
Q ss_pred HHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhc----CCeEEEEcCCccCHHHHHh
Q 002770 694 HTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTS----GHHVAMVGDGINDAPSLAL 769 (883)
Q Consensus 694 ~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~ 769 (883)
-.|+.|.+.|+++.++||++...+..-|+++||. ++|-. -++|....+.|.++ .+.|+++||..||.|+|+.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~--~~~qG--~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~ 117 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK--HLYQG--ISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEK 117 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc--eeeec--hHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHH
Confidence 3588999999999999999999999999999997 67754 36888888877664 4689999999999999999
Q ss_pred CCeeEEeecCCccHHHHhhcCEEEeCCC----hhhHHHHHHHHHHHHH
Q 002770 770 ADVGIALQIEAQENAASTAASIILLGNK----LSQVVDALDLAKATMA 813 (883)
Q Consensus 770 AdvgIa~~~~~~~~~a~~~ad~vl~~~~----~~~l~~~i~~~r~~~~ 813 (883)
.++++|+ .++.+..++.||+|+..+. ...+.++|..++..+.
T Consensus 118 vGls~a~--~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 118 VGLSVAV--ADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred cCCcccc--cccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 9999999 8999999999999997654 4445555555554433
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.1e-09 Score=105.64 Aligned_cols=116 Identities=19% Similarity=0.260 Sum_probs=91.5
Q ss_pred EEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhh----cCCe
Q 002770 678 IIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQT----SGHH 753 (883)
Q Consensus 678 ~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~----~g~~ 753 (883)
.++.+.+.|.. +|++|+++|+++.++||++...+..+.+.+|+. .++... ..|.+.++.+.+ ....
T Consensus 25 ~~~~~~~~~~~------~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~--~~~~~~--~~k~~~~~~~~~~~~~~~~~ 94 (154)
T TIGR01670 25 EIKAFNVRDGY------GIRCALKSGIEVAIITGRKAKLVEDRCKTLGIT--HLYQGQ--SNKLIAFSDILEKLALAPEN 94 (154)
T ss_pred EEEEEechhHH------HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCC--EEEecc--cchHHHHHHHHHHcCCCHHH
Confidence 55555555442 899999999999999999999999999999997 444433 456666665543 3468
Q ss_pred EEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhh-HHHHH
Q 002770 754 VAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQ-VVDAL 805 (883)
Q Consensus 754 v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~-l~~~i 805 (883)
++|+||+.||.+|++.|++++++ .++.+..+..|++++.++.-++ +.+++
T Consensus 95 ~~~vGDs~~D~~~~~~ag~~~~v--~~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 95 VAYIGDDLIDWPVMEKVGLSVAV--ADAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred EEEECCCHHHHHHHHHCCCeEec--CCcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 99999999999999999999999 7888889999999998765443 44443
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=5.3e-09 Score=112.97 Aligned_cols=53 Identities=25% Similarity=0.310 Sum_probs=50.0
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 752 HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
+.|+++|||.||.+||+.|++|+|| +|+.+.+|+.||+|+.+++-+++.++|+
T Consensus 213 ~~v~afGD~~NDi~Ml~~ag~~vAm--~NA~~~vK~~A~~vt~~n~~dGva~~i~ 265 (270)
T PRK10513 213 EEVMAIGDQENDIAMIEYAGVGVAM--GNAIPSVKEVAQFVTKSNLEDGVAFAIE 265 (270)
T ss_pred HHEEEECCchhhHHHHHhCCceEEe--cCccHHHHHhcCeeccCCCcchHHHHHH
Confidence 5799999999999999999999999 8999999999999999999999988875
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.7e-09 Score=111.26 Aligned_cols=132 Identities=22% Similarity=0.281 Sum_probs=100.3
Q ss_pred EEEEEecCceEEEEEEecCC-CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCce----------------
Q 002770 668 VVYVGREGEGIIGAIAISDS-LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEY---------------- 730 (883)
Q Consensus 668 ~~~~a~~~~~~lG~i~l~D~-lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~---------------- 730 (883)
.++.-.||. ++ -.|. +.+.+.++|++|++.|++++++||++...+..+.+.+|++...
T Consensus 5 li~~DlDGT-Ll----~~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~ 79 (230)
T PRK01158 5 AIAIDIDGT-IT----DKDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKR 79 (230)
T ss_pred EEEEecCCC-cC----CCCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCE
Confidence 444445554 33 3343 7899999999999999999999999999999999999983110
Q ss_pred -------------------------EE------------------------------------------EecCcc--chH
Q 002770 731 -------------------------IN------------------------------------------SSLTPQ--QKS 741 (883)
Q Consensus 731 -------------------------v~------------------------------------------~~~~p~--~K~ 741 (883)
.+ .++.|. .|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg 159 (230)
T PRK01158 80 IFLGDIEECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKG 159 (230)
T ss_pred EEEcchHHHHHHHHHHHHhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChH
Confidence 00 011111 144
Q ss_pred HHHHHHhhc----CCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 742 EVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 742 ~~v~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
..++.+.+. ...++++||+.||.+|++.|++|+|| +|+.+.+|+.||+|+.+++-+++.++++
T Consensus 160 ~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam--~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 160 TGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV--ANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred HHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe--cCccHHHHHhcceEecCCCcChHHHHHH
Confidence 444444332 25699999999999999999999999 8999999999999999999999988875
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=5.4e-09 Score=112.53 Aligned_cols=124 Identities=23% Similarity=0.391 Sum_probs=99.4
Q ss_pred EEecCC-CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc-------------------------------
Q 002770 682 IAISDS-LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE------------------------------- 729 (883)
Q Consensus 682 i~l~D~-lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~------------------------------- 729 (883)
+.-.|. +.+.++++|+++++.|++++++||++...+..+.+++|++..
T Consensus 14 Ll~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~ 93 (264)
T COG0561 14 LLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLE 93 (264)
T ss_pred ccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHH
Confidence 333443 899999999999999999999999999999999999998310
Q ss_pred ----------eEE-------------------------------------------------------------------
Q 002770 730 ----------YIN------------------------------------------------------------------- 732 (883)
Q Consensus 730 ----------~v~------------------------------------------------------------------- 732 (883)
.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 173 (264)
T COG0561 94 LLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTV 173 (264)
T ss_pred HHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEE
Confidence 000
Q ss_pred -------EecCcc--chHHHHHHHhhc-C---CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChh
Q 002770 733 -------SSLTPQ--QKSEVISTLQTS-G---HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLS 799 (883)
Q Consensus 733 -------~~~~p~--~K~~~v~~l~~~-g---~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~ 799 (883)
.++.|. +|...++.+.+. | ..|+++||+.||.+||+.|+.|||| +|+.+.+++.||++..+++-+
T Consensus 174 ~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam--~Na~~~~k~~A~~vt~~n~~~ 251 (264)
T COG0561 174 SSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM--GNADEELKELADYVTTSNDED 251 (264)
T ss_pred EEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec--cCCCHHHHhhCCcccCCccch
Confidence 011222 355556655552 3 3599999999999999999999999 899999999999998999999
Q ss_pred hHHHHHHH
Q 002770 800 QVVDALDL 807 (883)
Q Consensus 800 ~l~~~i~~ 807 (883)
++.++++.
T Consensus 252 Gv~~~l~~ 259 (264)
T COG0561 252 GVAEALEK 259 (264)
T ss_pred HHHHHHHH
Confidence 99988764
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.7e-09 Score=109.35 Aligned_cols=116 Identities=19% Similarity=0.235 Sum_probs=94.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCce------------------------------------
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEY------------------------------------ 730 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~------------------------------------ 730 (883)
.+.+++.++|++|++.|++++++||++...+..++++++++...
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 48899999999999999999999999999999999999983100
Q ss_pred ---------------------------------------EEEecCc--cchHHHHHHHhhc----CCeEEEEcCCccCHH
Q 002770 731 ---------------------------------------INSSLTP--QQKSEVISTLQTS----GHHVAMVGDGINDAP 765 (883)
Q Consensus 731 ---------------------------------------v~~~~~p--~~K~~~v~~l~~~----g~~v~~vGDg~ND~~ 765 (883)
.+..+.| -.|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0011112 2566666666543 246999999999999
Q ss_pred HHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHH
Q 002770 766 SLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 766 al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~ 804 (883)
|++.|+.|+|| +++.+.+++.||+|+.+++-+++.++
T Consensus 178 ml~~ag~~vam--~na~~~~k~~A~~v~~~~~~~Gv~~~ 214 (215)
T TIGR01487 178 LFRVVGFKVAV--ANADDQLKEIADYVTSNPYGEGVVEV 214 (215)
T ss_pred HHHhCCCeEEc--CCccHHHHHhCCEEcCCCCCchhhhh
Confidence 99999999999 89999999999999988888888765
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=5.3e-09 Score=113.10 Aligned_cols=53 Identities=15% Similarity=0.148 Sum_probs=48.3
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCE--EEeCCChhhHHHHHH
Q 002770 752 HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASI--ILLGNKLSQVVDALD 806 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~--vl~~~~~~~l~~~i~ 806 (883)
..|+++|||.||.+||+.|+.|||| +|+.+.+|+.||. |+.+++-+++.++|+
T Consensus 205 ~~v~afGD~~NDi~Ml~~ag~~vAm--~Na~~~vK~~A~~~~v~~~n~edGva~~l~ 259 (272)
T PRK15126 205 ADCMAFGDAMNDREMLGSVGRGFIM--GNAMPQLRAELPHLPVIGHCRNQAVSHYLT 259 (272)
T ss_pred HHeEEecCCHHHHHHHHHcCCceec--cCChHHHHHhCCCCeecCCCcchHHHHHHH
Confidence 5799999999999999999999999 8999999999996 677888999988774
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-08 Score=110.13 Aligned_cols=53 Identities=23% Similarity=0.277 Sum_probs=48.9
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcC--EEEeCCChhhHHHHHH
Q 002770 752 HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAAS--IILLGNKLSQVVDALD 806 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad--~vl~~~~~~~l~~~i~ 806 (883)
..|+++||+.||.+||+.|+.|+|| +|+.+.+|+.|| .|+.+++-+++.++++
T Consensus 207 ~~viafGD~~NDi~Ml~~ag~~vAm--~NA~~~vK~~A~~~~v~~~n~edGVa~~l~ 261 (266)
T PRK10976 207 KDCIAFGDGMNDAEMLSMAGKGCIM--GNAHQRLKDLLPELEVIGSNADDAVPHYLR 261 (266)
T ss_pred HHeEEEcCCcccHHHHHHcCCCeee--cCCcHHHHHhCCCCeecccCchHHHHHHHH
Confidence 5799999999999999999999999 899999999988 7888899999988875
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.1e-09 Score=103.36 Aligned_cols=103 Identities=18% Similarity=0.252 Sum_probs=83.8
Q ss_pred HHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCcc--chHHHHHHHhhcCCeEEEEcCCccCHHHHHhCC
Q 002770 694 HTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQ--QKSEVISTLQTSGHHVAMVGDGINDAPSLALAD 771 (883)
Q Consensus 694 ~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~--~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~Ad 771 (883)
..|+.|++.|+++.++|+.+...+....+.+|+. .++....|+ ....+++.++-....++||||+.||.+|++.|+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~--~~f~~~kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag 118 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK--RFHEGIKKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVG 118 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc--EEEecCCCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCC
Confidence 5789999999999999999999999999999997 555554332 223333333333467999999999999999999
Q ss_pred eeEEeecCCccHHHHhhcCEEEeCCChhh
Q 002770 772 VGIALQIEAQENAASTAASIILLGNKLSQ 800 (883)
Q Consensus 772 vgIa~~~~~~~~~a~~~ad~vl~~~~~~~ 800 (883)
++++| .++.+..++.|++|+..++-.+
T Consensus 119 ~~~am--~nA~~~lk~~A~~I~~~~~~~g 145 (169)
T TIGR02726 119 LAVAV--GDAVADVKEAAAYVTTARGGHG 145 (169)
T ss_pred CeEEC--cCchHHHHHhCCEEcCCCCCCC
Confidence 99999 8999999999999987655444
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.2e-08 Score=106.66 Aligned_cols=113 Identities=23% Similarity=0.360 Sum_probs=93.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEe-----------------cCccchHHHHHHHhh
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS-----------------LTPQQKSEVISTLQT 749 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~~l~~ 749 (883)
++.+++.+.++.|++.|+++.++||.....+..+.+.+|+.. +++. ..++.|..+++.+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 162 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDA--AFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILLR 162 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCc--eEeeEEEEECCEEEEEecCcccCCcccHHHHHHHHH
Confidence 578999999999999999999999999999999999999963 4321 113347777776654
Q ss_pred cC----CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHH
Q 002770 750 SG----HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 750 ~g----~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~ 804 (883)
+. +.++||||+.||.++++.|++++++ ++.+..++.||+++.++++..+..+
T Consensus 163 ~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~---~~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 163 KEGISPENTVAVGDGANDLSMIKAAGLGIAF---NAKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred HcCCCHHHEEEEECCHHHHHHHHhCCCeEEe---CCCHHHHHhchhccCCCCHHHHHhh
Confidence 42 4699999999999999999999999 3567888999999999998887654
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.85 E-value=1e-08 Score=105.83 Aligned_cols=105 Identities=25% Similarity=0.313 Sum_probs=85.2
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--------------eEEE-ecCccchHHHHHHHhhc
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--------------YINS-SLTPQQKSEVISTLQTS 750 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--------------~v~~-~~~p~~K~~~v~~l~~~ 750 (883)
.+++|++.+.++.+|++|.+++++||-...-+..+++++|++.. .+.. .+..+.|...++.+.+.
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~~ 155 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAAE 155 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999521 0111 23457899888777664
Q ss_pred -CC---eEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEE
Q 002770 751 -GH---HVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIIL 793 (883)
Q Consensus 751 -g~---~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl 793 (883)
|. .+.++|||.||.|||+.||.+|++ +..+..+..|+...
T Consensus 156 ~g~~~~~~~a~gDs~nDlpml~~ag~~ia~---n~~~~l~~~a~~~~ 199 (212)
T COG0560 156 LGIPLEETVAYGDSANDLPMLEAAGLPIAV---NPKPKLRALADVRI 199 (212)
T ss_pred cCCCHHHeEEEcCchhhHHHHHhCCCCeEe---CcCHHHHHHHHHhc
Confidence 43 599999999999999999999999 44555666666554
|
|
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.5e-08 Score=104.54 Aligned_cols=118 Identities=19% Similarity=0.281 Sum_probs=94.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc-------------------------------------
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE------------------------------------- 729 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~------------------------------------- 729 (883)
.+.+.+.++|++|++.|++++++||++...+..+.+++|+...
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4789999999999999999999999999999999999986210
Q ss_pred ------------------------------------eE-------EEecCcc--chHHHHHHHhhc----CCeEEEEcCC
Q 002770 730 ------------------------------------YI-------NSSLTPQ--QKSEVISTLQTS----GHHVAMVGDG 760 (883)
Q Consensus 730 ------------------------------------~v-------~~~~~p~--~K~~~v~~l~~~----g~~v~~vGDg 760 (883)
.+ +..+.|. .|...++.+.+. ...++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 00 0011221 466666666543 2579999999
Q ss_pred ccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhh----HHHHHH
Q 002770 761 INDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQ----VVDALD 806 (883)
Q Consensus 761 ~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~----l~~~i~ 806 (883)
.||.+|++.|++|+|| +|+.+.+|+.||.|+.+++-.+ +.++++
T Consensus 175 ~NDi~m~~~ag~~vam--~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAV--ANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEc--CChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 9999999999999999 8999999999999998888888 655543
|
catalyze the same reaction as SPP. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=6.5e-09 Score=100.82 Aligned_cols=91 Identities=29% Similarity=0.423 Sum_probs=79.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEec-------------------CccchHHHHHHH
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSL-------------------TPQQKSEVISTL 747 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~-------------------~p~~K~~~v~~l 747 (883)
.+.|++++.+..|++.|.+++++||.-...+..+|.++||+..++||+. ....|.++++.+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggKa~~i~~l 167 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGKAEVIALL 167 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCCccccCCccHHHHHHH
Confidence 4689999999999999999999999999999999999999876677652 234699999999
Q ss_pred hhc--CCeEEEEcCCccCHHHHHhCCeeEEee
Q 002770 748 QTS--GHHVAMVGDGINDAPSLALADVGIALQ 777 (883)
Q Consensus 748 ~~~--g~~v~~vGDg~ND~~al~~AdvgIa~~ 777 (883)
++. ...++|||||.||.+|+..||.=|+.+
T Consensus 168 rk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 168 RKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred HhCCChheeEEecCCccccccCCchhhhhccC
Confidence 884 357999999999999999988777774
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=5.1e-08 Score=105.32 Aligned_cols=53 Identities=23% Similarity=0.419 Sum_probs=49.1
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 752 HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
+.++++||+.||.+|++.|++|++| +++.+..++.||+++.+++-+++.++++
T Consensus 216 ~e~i~~GD~~NDi~m~~~ag~~vam--gna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 216 KNVVAFGDNFNDISMLEAAGLGVAM--GNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred HHeEEeCCChhhHHHHHhcCceEEe--cCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 4699999999999999999999999 7888899999999999999999998875
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.2e-08 Score=102.76 Aligned_cols=119 Identities=25% Similarity=0.313 Sum_probs=96.7
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc-----------------------------------
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE----------------------------------- 729 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~----------------------------------- 729 (883)
...+.+++.+++++|+++|+++++.||++...+..+.+++++...
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345789999999999999999999999999999999999997200
Q ss_pred --------------------------------------------------e-------------------------E---
Q 002770 730 --------------------------------------------------Y-------------------------I--- 731 (883)
Q Consensus 730 --------------------------------------------------~-------------------------v--- 731 (883)
. .
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0 0
Q ss_pred ----EEecCc--cchHHHHHHHhhc----CCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhH
Q 002770 732 ----NSSLTP--QQKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQV 801 (883)
Q Consensus 732 ----~~~~~p--~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l 801 (883)
+..++| -.|...++.+.+. .+.++++||+.||.+||+.++.|+|| +++++..++.||+++..++-.++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am--~na~~~~k~~a~~i~~~~~~~gv 250 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM--GNATPELKKAADYITPSNNDDGV 250 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE--TTS-HHHHHHSSEEESSGTCTHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE--cCCCHHHHHhCCEEecCCCCChH
Confidence 112233 3577777777652 36899999999999999999999999 89999999999999987776888
Q ss_pred HHHH
Q 002770 802 VDAL 805 (883)
Q Consensus 802 ~~~i 805 (883)
.++|
T Consensus 251 ~~~i 254 (254)
T PF08282_consen 251 AKAI 254 (254)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 7764
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=8.6e-08 Score=97.07 Aligned_cols=98 Identities=19% Similarity=0.274 Sum_probs=82.2
Q ss_pred HHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccchHHHHHHHhhc----CCeEEEEcCCccCHHHHHh
Q 002770 694 HTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTS----GHHVAMVGDGINDAPSLAL 769 (883)
Q Consensus 694 ~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~ 769 (883)
.+|+.|+++|+++.++||++...+..+++++|+. .++.. .++|...++.+.++ ...++||||+.||.+|++.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~--~~f~g--~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~ 130 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT--HLYQG--QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEK 130 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc--eeecC--CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHH
Confidence 6899999999999999999999999999999996 45543 35676666655432 3579999999999999999
Q ss_pred CCeeEEeecCCccHHHHhhcCEEEeCCC
Q 002770 770 ADVGIALQIEAQENAASTAASIILLGNK 797 (883)
Q Consensus 770 AdvgIa~~~~~~~~~a~~~ad~vl~~~~ 797 (883)
|++++++ +++.+..+..||+++..++
T Consensus 131 aG~~~~v--~~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 131 VGLSVAV--ADAHPLLLPRADYVTRIAG 156 (183)
T ss_pred CCCeEec--CChhHHHHHhCCEEecCCC
Confidence 9999998 7788888899999986443
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.3e-08 Score=113.58 Aligned_cols=53 Identities=32% Similarity=0.475 Sum_probs=50.0
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 752 HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
..|+++|||.||.+||+.|+.|||| +|+.+.+|+.||+|+.+++-++|.++|+
T Consensus 524 eeviAFGDs~NDIeMLe~AG~gVAM--gNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 524 DEIMAIGDGENDIEMLQLASLGVAL--SNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred HHEEEEecchhhHHHHHHCCCEEEe--CCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 3699999999999999999999999 8999999999999999999999998875
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.4e-07 Score=95.65 Aligned_cols=115 Identities=21% Similarity=0.296 Sum_probs=88.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc----------e-EEEe--cCccchHHHHHHHhhcCCe
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE----------Y-INSS--LTPQQKSEVISTLQTSGHH 753 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~----------~-v~~~--~~p~~K~~~v~~l~~~g~~ 753 (883)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|++.- . +... ..|+.|...++.++..+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~~~~ 146 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSLGYR 146 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHHHhCCe
Confidence 3578999999999999 99999999999999999999998520 0 1111 2467888999999888899
Q ss_pred EEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCE-EEeCCChhhHHHHHH
Q 002770 754 VAMVGDGINDAPSLALADVGIALQIEAQENAASTAASI-ILLGNKLSQVVDALD 806 (883)
Q Consensus 754 v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~-vl~~~~~~~l~~~i~ 806 (883)
++||||+.||.+|.+.|++|+.+ +.........++. ++ +++..+...+.
T Consensus 147 ~v~iGDs~~D~~~~~aa~~~v~~--~~~~~~~~~~~~~~~~--~~~~el~~~l~ 196 (205)
T PRK13582 147 VIAAGDSYNDTTMLGEADAGILF--RPPANVIAEFPQFPAV--HTYDELLAAID 196 (205)
T ss_pred EEEEeCCHHHHHHHHhCCCCEEE--CCCHHHHHhCCccccc--CCHHHHHHHHH
Confidence 99999999999999999999988 4443334445555 33 44766665544
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.59 E-value=2.2e-07 Score=99.57 Aligned_cols=51 Identities=27% Similarity=0.343 Sum_probs=47.0
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHH
Q 002770 752 HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~ 804 (883)
..++++||+.||.+|++.|+.|++| +++.+..++.||+++.+++-+++.++
T Consensus 205 ~~~~~~GD~~nD~~m~~~~~~~~a~--~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 205 EDVIAFGDGMNDIEMLEAAGYGVAM--GNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred HHEEEeCCcHHhHHHHHhCCceeEe--cCchHHHHHhCCEEecCCCCcchhhh
Confidence 5799999999999999999999999 78899999999999998888888764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.7e-07 Score=94.23 Aligned_cols=115 Identities=22% Similarity=0.310 Sum_probs=86.2
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEe-------------------cCccchHHHHHHHh
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS-------------------LTPQQKSEVISTLQ 748 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~-------------------~~p~~K~~~v~~l~ 748 (883)
+.|++.+.++.|++.|+++.++||.....+..+++.+|++...+++. .....|.+.++.+.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~~~ 164 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQHIK 164 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHHHH
Confidence 67999999999999999999999999999999999999974334431 01235888888776
Q ss_pred hc--CCeEEEEcCCccCHHHHHh--CCeeEEeecCCccHHHHhhcCEEEeCCChhhHHHH
Q 002770 749 TS--GHHVAMVGDGINDAPSLAL--ADVGIALQIEAQENAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 749 ~~--g~~v~~vGDg~ND~~al~~--AdvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~ 804 (883)
++ ...++||||+.||..|.+. ++++++.++....+.....+|+++. ++..+..+
T Consensus 165 ~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~el~~~ 222 (224)
T PLN02954 165 KKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT--DFQDLIEV 222 (224)
T ss_pred HHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--CHHHHHHh
Confidence 64 3579999999999999777 5666766322223344556899874 46666554
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.50 E-value=5.8e-07 Score=92.28 Aligned_cols=100 Identities=33% Similarity=0.433 Sum_probs=78.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEe-----------------cCccchHHHHHHHhh
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS-----------------LTPQQKSEVISTLQT 749 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~-----------------~~p~~K~~~v~~l~~ 749 (883)
++++++.+.++.|+++|+++.++|+.....+..+++.+|+. .+++. ..|..|.+.++.+.+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~~~ 157 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPD--YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERLKR 157 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCC--eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHHHH
Confidence 47899999999999999999999999999999999999986 33321 224567667766644
Q ss_pred c----CCeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcC
Q 002770 750 S----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAAS 790 (883)
Q Consensus 750 ~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad 790 (883)
+ .+.++||||+.||.+|++.||+++++ +......+.+.|
T Consensus 158 ~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~--~~~~~~~~~a~~ 200 (201)
T TIGR01491 158 ELNPSLTETVAVGDSKNDLPMFEVADISISL--GDEGHADYLAKD 200 (201)
T ss_pred HhCCCHHHEEEEcCCHhHHHHHHhcCCeEEE--CCCccchhhccc
Confidence 3 35699999999999999999999999 443434444443
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.4e-06 Score=92.40 Aligned_cols=59 Identities=10% Similarity=0.217 Sum_probs=47.1
Q ss_pred CCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC
Q 002770 665 SKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG 727 (883)
Q Consensus 665 g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~ 727 (883)
...+++.-.||. ++. =...+.+.++++|++|+++|++++++||++...+..+++++|++
T Consensus 6 ~~~lI~~DlDGT-LL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 6 DPLLIFTDLDGT-LLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred CCeEEEEeCccC-CcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 445666666775 432 12345688999999999999999999999999999999999873
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.40 E-value=2.8e-06 Score=91.05 Aligned_cols=54 Identities=19% Similarity=0.260 Sum_probs=46.2
Q ss_pred CCeEEEEcCCccCHHHHHhCCeeEEeecCCcc---HHHHhh--c-CEEEeCCChhhHHHHHH
Q 002770 751 GHHVAMVGDGINDAPSLALADVGIALQIEAQE---NAASTA--A-SIILLGNKLSQVVDALD 806 (883)
Q Consensus 751 g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~---~~a~~~--a-d~vl~~~~~~~l~~~i~ 806 (883)
...++++||+.||.+|++.|+.|||| +|+. +..++. | ++|..+++-+++.++++
T Consensus 194 ~~~~~a~GD~~ND~~Ml~~ag~~vam--~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~ 253 (256)
T TIGR01486 194 AIKVVGLGDSPNDLPLLEVVDLAVVV--PGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALE 253 (256)
T ss_pred CceEEEEcCCHhhHHHHHHCCEEEEe--CCCCCCccccCccCCCcEEEcCCCCcHHHHHHHH
Confidence 35699999999999999999999999 7776 467776 4 58888999999988875
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.4e-06 Score=87.76 Aligned_cols=90 Identities=19% Similarity=0.224 Sum_probs=75.3
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEe-----------cCc------------cchHH
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS-----------LTP------------QQKSE 742 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~-----------~~p------------~~K~~ 742 (883)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++.. +.++++ ..| ..|..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~-~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEK-DRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCc-ccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 367999999999999999999999999999999999888543 344431 112 24889
Q ss_pred HHHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEe
Q 002770 743 VISTLQTSGHHVAMVGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 743 ~v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~ 776 (883)
+++.++.....++|||||.||.+|++.||+.++-
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar 181 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFAR 181 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEeh
Confidence 9999988888899999999999999999998775
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.5e-06 Score=89.16 Aligned_cols=89 Identities=24% Similarity=0.288 Sum_probs=75.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEe---c----------Cc----------cchHHH
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS---L----------TP----------QQKSEV 743 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~---~----------~p----------~~K~~~ 743 (883)
+++|++.+.++.|++.|+++.++||.....+..+.+.+ +..+.++++ . .| ..|..+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~~~ 152 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKPSL 152 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCCchHHH
Confidence 57999999999999999999999999999999999998 754445543 1 11 248899
Q ss_pred HHHHhhcCCeEEEEcCCccCHHHHHhCCeeEEe
Q 002770 744 ISTLQTSGHHVAMVGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 744 v~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~ 776 (883)
++.++.....++|||||.||.+|.+.||+.++-
T Consensus 153 l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 153 IRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred HHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 999888878899999999999999999996663
|
|
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.31 E-value=1.5e-06 Score=88.36 Aligned_cols=79 Identities=32% Similarity=0.546 Sum_probs=66.9
Q ss_pred hhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEe-------------cCcc-c--hHHHHHHH------
Q 002770 690 HDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS-------------LTPQ-Q--KSEVISTL------ 747 (883)
Q Consensus 690 ~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~-------------~~p~-~--K~~~v~~l------ 747 (883)
+++.+.|+.++++|++++++||+....+..+++.+|++...+++. +++. + |...++.+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~ 171 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIRDEE 171 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHHhhc
Confidence 778899999999999999999999999999999999975433332 2333 3 99999999
Q ss_pred hhcCCeEEEEcCCccCHHHHH
Q 002770 748 QTSGHHVAMVGDGINDAPSLA 768 (883)
Q Consensus 748 ~~~g~~v~~vGDg~ND~~al~ 768 (883)
+.....++++|||.||.+||+
T Consensus 172 ~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESSGGGHHHHH
T ss_pred CCCCCeEEEEECCHHHHHHhC
Confidence 445789999999999999986
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.23 E-value=7.7e-06 Score=85.50 Aligned_cols=120 Identities=20% Similarity=0.320 Sum_probs=89.5
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEE-ec------CccchHHHHHHHhhcCCeEE
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINS-SL------TPQQKSEVISTLQTSGHHVA 755 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~-~~------~p~~K~~~v~~l~~~g~~v~ 755 (883)
...+-++++++++.|+++|++..++|+++...+..+.+..|+..- .+++ .- .|+.....++.+....+.++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l 166 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEAL 166 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheE
Confidence 345678999999999999999999999999999999999999632 1223 21 23334455555554444799
Q ss_pred EEcCCccCHHHHHhCC---eeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 756 MVGDGINDAPSLALAD---VGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 756 ~vGDg~ND~~al~~Ad---vgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
||||..+|..|-+.|+ ||+..|...........+|+++ +++..+...+.
T Consensus 167 ~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi--~~~~el~~~l~ 218 (220)
T COG0546 167 MVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVI--DSLAELLALLA 218 (220)
T ss_pred EECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999998 6777743234556667799998 44777766543
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.19 E-value=3e-05 Score=89.66 Aligned_cols=119 Identities=16% Similarity=0.181 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEE-----ecCccchHHHHHHHhhcCCeEEEEcCCc
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINS-----SLTPQQKSEVISTLQTSGHHVAMVGDGI 761 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~-----~~~p~~K~~~v~~l~~~g~~v~~vGDg~ 761 (883)
++++++.+.+++++++|++++++|+-+...+..+++.+|+-+ .+.+ +..|+.|.+.+++...+ +.+.++||..
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-~Vigsd~~~~~kg~~K~~~l~~~l~~-~~~~yvGDS~ 149 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-GVFASDGTTNLKGAAKAAALVEAFGE-RGFDYAGNSA 149 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-EEEeCCCccccCCchHHHHHHHHhCc-cCeeEecCCH
Confidence 478999999999999999999999999999999999999822 3432 35667787665543222 2368999999
Q ss_pred cCHHHHHhCCeeEEeecCCccHHH---HhhcCEEE-eCCChhhHHHHHHHHH
Q 002770 762 NDAPSLALADVGIALQIEAQENAA---STAASIIL-LGNKLSQVVDALDLAK 809 (883)
Q Consensus 762 ND~~al~~AdvgIa~~~~~~~~~a---~~~ad~vl-~~~~~~~l~~~i~~~r 809 (883)
||.++++.|+-.+++ +.+.... ++....+. ....-..+...+++.|
T Consensus 150 ~Dlp~~~~A~~av~V--n~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~l~R 199 (479)
T PRK08238 150 ADLPVWAAARRAIVV--GASPGVARAARALGPVERVFPPRPARLRTWLKALR 199 (479)
T ss_pred HHHHHHHhCCCeEEE--CCCHHHHHHHHHcCCcceecCCCchHHHHHHHHhC
Confidence 999999999999999 4433322 22223333 2333344555555554
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.16 E-value=1e-05 Score=84.63 Aligned_cols=121 Identities=17% Similarity=0.251 Sum_probs=88.4
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEEe-----cCcc--chHHHHHHHhhcCCeEEE
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINSS-----LTPQ--QKSEVISTLQTSGHHVAM 756 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~~-----~~p~--~K~~~v~~l~~~g~~v~~ 756 (883)
.++.+++.+.++.|++.|++++++||........+.+.+|+... .+++. ..|+ --..+++.++.....+++
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~i~ 171 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPEEMLF 171 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChhheEE
Confidence 35789999999999999999999999999999999999998531 22221 1222 123455555555678999
Q ss_pred EcCCccCHHHHHhCCe-eEEeecC--CccHHHHhhcCEEEeCCChhhHHHHHHHH
Q 002770 757 VGDGINDAPSLALADV-GIALQIE--AQENAASTAASIILLGNKLSQVVDALDLA 808 (883)
Q Consensus 757 vGDg~ND~~al~~Adv-gIa~~~~--~~~~~a~~~ad~vl~~~~~~~l~~~i~~~ 808 (883)
|||+.||+.+.+.+++ +|.+..+ +..+.....+++++ +++..+...+.++
T Consensus 172 igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~~ 224 (226)
T PRK13222 172 VGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGLA 224 (226)
T ss_pred ECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHHh
Confidence 9999999999999998 5555212 23344455788877 6688888877553
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.16 E-value=4.3e-06 Score=84.00 Aligned_cols=81 Identities=31% Similarity=0.469 Sum_probs=67.7
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEE-------------------ecCccchHHHHHHHh
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINS-------------------SLTPQQKSEVISTLQ 748 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~-------------------~~~p~~K~~~v~~l~ 748 (883)
+++++.+.++.+++.|++++++||.....+..+++.+|+.. +++ ...++.|...++.++
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~~~~ 151 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD--VFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLKELL 151 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch--heeeeEEECCCCEEeCccCCcccCCcchHHHHHHHHH
Confidence 57899999999999999999999999999999999999862 221 123467998998876
Q ss_pred hc----CCeEEEEcCCccCHHHHHhC
Q 002770 749 TS----GHHVAMVGDGINDAPSLALA 770 (883)
Q Consensus 749 ~~----g~~v~~vGDg~ND~~al~~A 770 (883)
++ ...++++|||.||.+|++.|
T Consensus 152 ~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 152 EESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 54 35799999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.14 E-value=1.2e-05 Score=82.96 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=82.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEe-----cCcc--chHHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-----LTPQ--QKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~--~K~~~v~~l~~~g~~v~~v 757 (883)
++.+++.+++++|+++|+++.++|+.....+....+.+|+.. +.+++. ..|+ --..+++.++-..+.++||
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l~i 154 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMV 154 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheEEE
Confidence 568999999999999999999999999999999999999953 223321 1121 1133334444445779999
Q ss_pred cCCccCHHHHHhCCee---EEeecCCccHHHHhhcCEEEeCCChhhHHHHH
Q 002770 758 GDGINDAPSLALADVG---IALQIEAQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 758 GDg~ND~~al~~Advg---Ia~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i 805 (883)
||+.+|..+.+.+++. +..|.++..+..++.+|+++ +++..+..++
T Consensus 155 gD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~--~~~~~l~~~~ 203 (205)
T TIGR01454 155 GDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLL--RKPQSLLALC 203 (205)
T ss_pred cCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeee--CCHHHHHHHh
Confidence 9999999999999974 33322233345567789987 4476665544
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.14 E-value=8.6e-06 Score=83.79 Aligned_cols=90 Identities=21% Similarity=0.258 Sum_probs=74.4
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEe------------------cCccchHHHHHH
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS------------------LTPQQKSEVIST 746 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~------------------~~p~~K~~~v~~ 746 (883)
...+++++.+.++.++++|++++++||.....+..+++.+|++. +++. +.++.|...++.
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~--~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~ 162 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN--AIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAE 162 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc--eEecceEEcCCCEEeCCccCCCCCChHHHHHHHH
Confidence 34679999999999999999999999999999999999999962 3221 223568777776
Q ss_pred Hhh-cC---CeEEEEcCCccCHHHHHhCCeeEEe
Q 002770 747 LQT-SG---HHVAMVGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 747 l~~-~g---~~v~~vGDg~ND~~al~~AdvgIa~ 776 (883)
+.+ .+ ..+.++||+.||.+|++.|+.++++
T Consensus 163 ~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v 196 (202)
T TIGR01490 163 LLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVV 196 (202)
T ss_pred HHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEe
Confidence 644 33 3689999999999999999999998
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.12 E-value=9.9e-06 Score=82.10 Aligned_cols=89 Identities=21% Similarity=0.323 Sum_probs=73.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEEe-----------c------------CccchH
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINSS-----------L------------TPQQKS 741 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~~-----------~------------~p~~K~ 741 (883)
++.+++.+.++.|++.|+++.++|+.+......+.+..|+... .+++. . ....|.
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~K~ 151 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCGCCKG 151 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCCCCHH
Confidence 6789999999999999999999999999999999999998531 23321 0 112499
Q ss_pred HHHHHHhhc-CCeEEEEcCCccCHHHHHhCCeeEE
Q 002770 742 EVISTLQTS-GHHVAMVGDGINDAPSLALADVGIA 775 (883)
Q Consensus 742 ~~v~~l~~~-g~~v~~vGDg~ND~~al~~AdvgIa 775 (883)
++++.++++ ...++|||||.||..|.+.||+-.|
T Consensus 152 ~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 152 KVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 999999887 8899999999999999999987544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.9e-05 Score=83.42 Aligned_cols=67 Identities=13% Similarity=0.205 Sum_probs=54.9
Q ss_pred chHHHHHHHhhc-C---CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcC----EEEeCCChhhHHHHHHH
Q 002770 739 QKSEVISTLQTS-G---HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAAS----IILLGNKLSQVVDALDL 807 (883)
Q Consensus 739 ~K~~~v~~l~~~-g---~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad----~vl~~~~~~~l~~~i~~ 807 (883)
.|...++.+.++ | ..++++||+.||.+|++.++.||+| +++.+..++.|| +|..+++-.++.++|+.
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav--~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV--GNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE--cCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 355555555443 2 3689999999999999999999999 899999999999 78778888889888753
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.99 E-value=1.1e-05 Score=95.33 Aligned_cols=71 Identities=25% Similarity=0.420 Sum_probs=67.4
Q ss_pred EEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCcccccccC
Q 002770 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRVSG 152 (883)
Q Consensus 73 ~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~~~~ 152 (883)
+..+++.||+|++|+++||+.+++.+||.++.|.+..+++++.|||.. ++++.+.+.++++||.+.+.++.
T Consensus 70 ~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v---------~s~~~~~e~ie~~gf~a~~i~~~ 140 (951)
T KOG0207|consen 70 KCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAV---------TSPDSIAESIEDLGFSAELIESV 140 (951)
T ss_pred eeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcc---------cCchhHHHHHHhcCccceehhcc
Confidence 678999999999999999999999999999999999999999999998 89999999999999999877654
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.97 E-value=4.5e-05 Score=79.27 Aligned_cols=116 Identities=19% Similarity=0.271 Sum_probs=81.4
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEE-ec----C--ccchHHHHHHHhhcCCeEEEEc
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINS-SL----T--PQQKSEVISTLQTSGHHVAMVG 758 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~-~~----~--p~~K~~~v~~l~~~g~~v~~vG 758 (883)
+.|++.++++.|+++|+++.++|+.....+..+.+..|+..- .+++ .. . |+--..+++.+......++|||
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iG 162 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVG 162 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHEEEEC
Confidence 579999999999999999999999999999999999999631 1222 11 1 2222344444444456899999
Q ss_pred CCccCHHHHHhCCe---eEEeecCCccHHHHhhcCEEEeCCChhhHHHHH
Q 002770 759 DGINDAPSLALADV---GIALQIEAQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 759 Dg~ND~~al~~Adv---gIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i 805 (883)
|+.+|..+-+.|++ ++..+.....+.....+|+++ +++..+..++
T Consensus 163 Ds~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i--~~~~~l~~~i 210 (214)
T PRK13288 163 DNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFML--DKMSDLLAIV 210 (214)
T ss_pred CCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEE--CCHHHHHHHH
Confidence 99999999999997 333311122223345688876 4587777654
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=97.94 E-value=7e-05 Score=79.88 Aligned_cols=120 Identities=10% Similarity=0.105 Sum_probs=89.5
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc-----------------------------------
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE----------------------------------- 729 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~----------------------------------- 729 (883)
..+..|...+++++++++|+.++++||++...+..+.+++++...
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 345678999999999999999999999999999999998886211
Q ss_pred ------------------------e-------------------------E---EE-----ecCc--cchHHHHHHHhhc
Q 002770 730 ------------------------Y-------------------------I---NS-----SLTP--QQKSEVISTLQTS 750 (883)
Q Consensus 730 ------------------------~-------------------------v---~~-----~~~p--~~K~~~v~~l~~~ 750 (883)
. + .+ .+.| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 0 00 1122 1455556655443
Q ss_pred ----CCeEEEEcCCccCHHHHHh-CCeeEEeecCCccHHHHhhcC-------EEEeCCChhhHHHHHH
Q 002770 751 ----GHHVAMVGDGINDAPSLAL-ADVGIALQIEAQENAASTAAS-------IILLGNKLSQVVDALD 806 (883)
Q Consensus 751 ----g~~v~~vGDg~ND~~al~~-AdvgIa~~~~~~~~~a~~~ad-------~vl~~~~~~~l~~~i~ 806 (883)
...|+++||+.||.+|++. ++.|++| +|+.+..++.++ ++.....-+++.+.++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~--~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~ 244 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIV--SNAQEELLQWYDENAKDKIYHASERCAGGIIEAIA 244 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEE--CCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHH
Confidence 3679999999999999998 6799999 888888887543 5555556777777664
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=8.2e-05 Score=80.37 Aligned_cols=119 Identities=20% Similarity=0.317 Sum_probs=83.5
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEE-ecCccch--H----HHHHHHhhcCCeEEE
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINS-SLTPQQK--S----EVISTLQTSGHHVAM 756 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~-~~~p~~K--~----~~v~~l~~~g~~v~~ 756 (883)
.++.+++.++++.|+++|+++.++|+.+...+..+.+..|+.. +.+++ ...+..| . .+++.+.-..+.++|
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~ 179 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLF 179 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEE
Confidence 3578999999999999999999999999999999999999853 12222 2223333 2 233333333568999
Q ss_pred EcCCccCHHHHHhCCe-eEEeecC--CccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 757 VGDGINDAPSLALADV-GIALQIE--AQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 757 vGDg~ND~~al~~Adv-gIa~~~~--~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
|||+.||+.+.+.|++ .+++..+ ...+..+..+|.++ +++..+..++.
T Consensus 180 IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi--~~l~el~~~~~ 230 (272)
T PRK13223 180 VGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVI--DDLRALLPGCA 230 (272)
T ss_pred ECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEE--CCHHHHHHHHh
Confidence 9999999999999997 3444212 23334455789887 45877775543
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.89 E-value=4.1e-05 Score=72.45 Aligned_cols=92 Identities=24% Similarity=0.348 Sum_probs=68.4
Q ss_pred ecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--CceEEE-----------------------ecCcc
Q 002770 684 ISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG--KEYINS-----------------------SLTPQ 738 (883)
Q Consensus 684 l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~--~~~v~~-----------------------~~~p~ 738 (883)
...++.+++.+.+++|++.|++++++||.....+....+.+|+. .+.+++ .-.++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34588999999999999999999999999999999999999972 112222 11222
Q ss_pred chHHHHHHHhhcCCeEEEEcCCccCHHHHHhC-CeeEE
Q 002770 739 QKSEVISTLQTSGHHVAMVGDGINDAPSLALA-DVGIA 775 (883)
Q Consensus 739 ~K~~~v~~l~~~g~~v~~vGDg~ND~~al~~A-dvgIa 775 (883)
.+..+.+.+......++++||+.||..|++.+ .-+|+
T Consensus 101 ~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 101 KLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred HHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 33344444444457899999999999999984 44443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.84 E-value=6.9e-05 Score=81.10 Aligned_cols=108 Identities=18% Similarity=0.221 Sum_probs=73.0
Q ss_pred HHHHHCCCEEEEE---cCCcHHHHHHHHHHcCCCC--ceEEEecCcc-chHHHHHHHhh----cC-CeEEEEcCCccCHH
Q 002770 697 RSLQQKGIKTLLL---SGDREEAVAATAKEVGIGK--EYINSSLTPQ-QKSEVISTLQT----SG-HHVAMVGDGINDAP 765 (883)
Q Consensus 697 ~~L~~~Gi~v~~l---TGd~~~~a~~ia~~~gi~~--~~v~~~~~p~-~K~~~v~~l~~----~g-~~v~~vGDg~ND~~ 765 (883)
+.+++.++...++ +...........+..|+.. ...+-.+.|. .|...++.+.+ .. ..|+++||+.||.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~ 221 (273)
T PRK00192 142 RLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLP 221 (273)
T ss_pred HHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHH
Confidence 4455556664444 3333444444445556530 0112233333 78888877764 35 88999999999999
Q ss_pred HHHhCCeeEEeecCCccHHHH----hhc-CEEE--eCCChhhHHHHHH
Q 002770 766 SLALADVGIALQIEAQENAAS----TAA-SIIL--LGNKLSQVVDALD 806 (883)
Q Consensus 766 al~~AdvgIa~~~~~~~~~a~----~~a-d~vl--~~~~~~~l~~~i~ 806 (883)
|++.|++|++| +|+.+.+| ..| +.+. .+++-+++.+.++
T Consensus 222 m~~~ag~~vam--~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 222 MLEAADIAVVV--PGPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred HHHhCCeeEEe--CCCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 99999999999 89999888 666 6777 5667888887765
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.82 E-value=6.3e-05 Score=77.96 Aligned_cols=115 Identities=17% Similarity=0.199 Sum_probs=79.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEe-cCccch------HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-LTPQQK------SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~-~~p~~K------~~~v~~l~~~g~~v~~v 757 (883)
++.+++.++++.|+++|+++.++|+.+...+..+.+..|+.. +.+++. -....| ..+.+.+......++||
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~~~i 164 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQMVYV 164 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhHeEEe
Confidence 468899999999999999999999999999999999999852 122322 111122 23333343345679999
Q ss_pred cCCccCHHHHHhCCeeEE-eecC--CccHHHHhhcCEEEeCCChhhHHH
Q 002770 758 GDGINDAPSLALADVGIA-LQIE--AQENAASTAASIILLGNKLSQVVD 803 (883)
Q Consensus 758 GDg~ND~~al~~AdvgIa-~~~~--~~~~~a~~~ad~vl~~~~~~~l~~ 803 (883)
||..||..+.+.|++-.. +..+ .........+|+++ +++..+..
T Consensus 165 gDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i--~~~~~l~~ 211 (213)
T TIGR01449 165 GDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLY--DSLNELPP 211 (213)
T ss_pred CCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEe--CCHHHHHh
Confidence 999999999999997433 3112 11223345688877 44666554
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00027 Score=76.30 Aligned_cols=116 Identities=16% Similarity=0.213 Sum_probs=80.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEE-ecCccchHHHHHHH-hh---cCCeEEEEcC
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINS-SLTPQQKSEVISTL-QT---SGHHVAMVGD 759 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~-~~~p~~K~~~v~~l-~~---~g~~v~~vGD 759 (883)
++-|++.++++.|+++|+++.++|+.+...+..+.+.+|+... .+.+ ...+ .|.+.+..+ ++ ....++||||
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~~~-~k~~~~~~~l~~~~~~p~~~l~IGD 220 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTPIL-SKRRALSQLVAREGWQPAAVMYVGD 220 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCCCC-CCHHHHHHHHHHhCcChhHEEEECC
Confidence 4678999999999999999999999999999999999999632 1111 1111 243443332 22 3467999999
Q ss_pred CccCHHHHHhCCee-EEeecCCccH--HHHhhcCEEEeCCChhhHHHHH
Q 002770 760 GINDAPSLALADVG-IALQIEAQEN--AASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 760 g~ND~~al~~Advg-Ia~~~~~~~~--~a~~~ad~vl~~~~~~~l~~~i 805 (883)
+.+|+.+-+.|++- |.+..+.... .....+|+++ +++..|..++
T Consensus 221 s~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i--~~~~eL~~~~ 267 (273)
T PRK13225 221 ETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLL--ETPSDLLQAV 267 (273)
T ss_pred CHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEE--CCHHHHHHHH
Confidence 99999999999963 3331122222 3344689887 5587777654
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00042 Score=73.89 Aligned_cols=119 Identities=15% Similarity=0.233 Sum_probs=84.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--CceEEEec-----------C--c----cchHHHHHH-
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG--KEYINSSL-----------T--P----QQKSEVIST- 746 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~--~~~v~~~~-----------~--p----~~K~~~v~~- 746 (883)
+++||+.+.++.|++.|+++.++||-....+..+.+++|+. ...++|+. . | ..|.+.+..
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~v~~~ 200 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHDVALR 200 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHHHHHH
Confidence 56999999999999999999999999999999999999983 22443321 1 2 246554432
Q ss_pred ----Hh--hcCCeEEEEcCCccCHHHHHhCC-----eeEEeecCC---ccHHHHhhcCEEEeCCChhhHHHHH
Q 002770 747 ----LQ--TSGHHVAMVGDGINDAPSLALAD-----VGIALQIEA---QENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 747 ----l~--~~g~~v~~vGDg~ND~~al~~Ad-----vgIa~~~~~---~~~~a~~~ad~vl~~~~~~~l~~~i 805 (883)
++ .....++++|||.||+.|..-.. +.|++-..+ .-+.-+++-|+|+.+|.-..++..|
T Consensus 201 ~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 201 NTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHH
Confidence 22 23467999999999999965441 345542111 2234567889999988766666554
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00061 Score=73.30 Aligned_cols=132 Identities=18% Similarity=0.227 Sum_probs=90.1
Q ss_pred CeEEEEEecCceEEEEEEe--cCCCChhHHHHHHHHHH-CCCEEEEEcCCcHHHHHHHHHHcCCC-----------C-c-
Q 002770 666 KSVVYVGREGEGIIGAIAI--SDSLRHDAEHTVRSLQQ-KGIKTLLLSGDREEAVAATAKEVGIG-----------K-E- 729 (883)
Q Consensus 666 ~~~~~~a~~~~~~lG~i~l--~D~lr~~~~~~i~~L~~-~Gi~v~~lTGd~~~~a~~ia~~~gi~-----------~-~- 729 (883)
...+++-+||. ++-...= .-.+.++++++|++|++ .|++++++||++...+..+.+.+++. . .
T Consensus 14 ~~li~~D~DGT-Ll~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGT-LAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCC-CCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCC
Confidence 46677777876 4421000 12567899999999998 79999999999999998888776641 0 0
Q ss_pred ----------------------------------------------------------------------eEEEecCcc-
Q 002770 730 ----------------------------------------------------------------------YINSSLTPQ- 738 (883)
Q Consensus 730 ----------------------------------------------------------------------~v~~~~~p~- 738 (883)
..+.++.|.
T Consensus 93 ~~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g 172 (266)
T PRK10187 93 THIVHLPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRG 172 (266)
T ss_pred eeeccCChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCC
Confidence 001112222
Q ss_pred -chHHHHHHHhhc----CCeEEEEcCCccCHHHHHhC----CeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 739 -QKSEVISTLQTS----GHHVAMVGDGINDAPSLALA----DVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 739 -~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A----dvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
+|...++.+.+. ...++++||+.||.+|++.+ +.||+| +++. ..|++.+. +...+..++.
T Consensus 173 ~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vav--g~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 173 TNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKV--GTGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred CCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEE--CCCC----CcCeEeCC--CHHHHHHHHH
Confidence 455555554433 35799999999999999999 999999 6654 45788774 5666665554
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00038 Score=79.46 Aligned_cols=118 Identities=16% Similarity=0.188 Sum_probs=84.6
Q ss_pred CCChhHHHHH-HHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCce-----------------------------------
Q 002770 687 SLRHDAEHTV-RSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEY----------------------------------- 730 (883)
Q Consensus 687 ~lr~~~~~~i-~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~----------------------------------- 730 (883)
.+.+...+++ +++++.|+.+++.||+.......+.++.++....
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3443444555 8899999999999999999999999998862110
Q ss_pred -------------------------------------------------E--------EEecCcc--chHHHHHHHhhc-
Q 002770 731 -------------------------------------------------I--------NSSLTPQ--QKSEVISTLQTS- 750 (883)
Q Consensus 731 -------------------------------------------------v--------~~~~~p~--~K~~~v~~l~~~- 750 (883)
+ +.++.|. .|...++.|.+.
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 0 0112332 366666666554
Q ss_pred ---C---CeEEEEcCCccCHHHHHhCC-eeEEeecCCccHHHHhhc--------CEEEe-CCChhhHHHHHH
Q 002770 751 ---G---HHVAMVGDGINDAPSLALAD-VGIALQIEAQENAASTAA--------SIILL-GNKLSQVVDALD 806 (883)
Q Consensus 751 ---g---~~v~~vGDg~ND~~al~~Ad-vgIa~~~~~~~~~a~~~a--------d~vl~-~~~~~~l~~~i~ 806 (883)
| ..++++||+.||.+||+.++ .||+| +|+.+..++.+ +++.. +++-+++.++++
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam--~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV--SNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE--cCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 2 47899999999999999999 69999 88998888743 55533 445677777665
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00031 Score=73.86 Aligned_cols=117 Identities=11% Similarity=0.106 Sum_probs=81.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEE-ecCccc------hHHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINS-SLTPQQ------KSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~-~~~p~~------K~~~v~~l~~~g~~v~~v 757 (883)
++.|++.+.++.|++.|+++.++|+.+...+..+.+..|+... .+.+ ...+.. =..+++.+.-....++||
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~l~I 174 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYV 174 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhhEEEe
Confidence 4688999999999999999999999999988888899998531 2222 111112 244555555556789999
Q ss_pred cCCccCHHHHHhCCee-EEeecCC--cc-HHHHhhcCEEEeCCChhhHHHHH
Q 002770 758 GDGINDAPSLALADVG-IALQIEA--QE-NAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 758 GDg~ND~~al~~Advg-Ia~~~~~--~~-~~a~~~ad~vl~~~~~~~l~~~i 805 (883)
||+.||..+.+.|++. |++..+. .. ......+|+++ +++..+...+
T Consensus 175 GDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i--~~~~el~~~~ 224 (229)
T PRK13226 175 GDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLV--EQPQLLWNPA 224 (229)
T ss_pred CCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeee--CCHHHHHHHh
Confidence 9999999999999964 3331122 11 22345688888 4466665544
|
|
| >TIGR00003 copper ion binding protein | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00044 Score=55.26 Aligned_cols=65 Identities=15% Similarity=0.416 Sum_probs=55.6
Q ss_pred EEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCcc
Q 002770 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEA 146 (883)
Q Consensus 73 ~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~ 146 (883)
+..+.+.||+|.+|++.+++.+.+.+++....+++..++..+.+++.. .....+...+.+.||.+
T Consensus 3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~ 67 (68)
T TIGR00003 3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQ---------ATEICIAEAILDAGYEV 67 (68)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCC---------CCHHHHHHHHHHcCCCc
Confidence 457999999999999999999999999999999999999999998654 35566766678888864
|
This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0002 Score=89.57 Aligned_cols=64 Identities=30% Similarity=0.503 Sum_probs=54.9
Q ss_pred eEEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCccccc
Q 002770 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRR 149 (883)
Q Consensus 72 ~~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~ 149 (883)
+++++.|+||+|++|+.+||+++++++||.+++|++. +..+..+ .+.+.+.+.++++||++...
T Consensus 3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~------------~~~~~i~~~i~~~Gy~~~~~ 66 (834)
T PRK10671 3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGT------------ASAEALIETIKQAGYDASVS 66 (834)
T ss_pred eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEec------------CCHHHHHHHHHhcCCccccc
Confidence 4689999999999999999999999999999999994 4455432 35689999999999998764
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00039 Score=72.68 Aligned_cols=114 Identities=13% Similarity=0.121 Sum_probs=77.0
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEEe-----cCccchHHHHHHHhhc---CCeEE
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINSS-----LTPQQKSEVISTLQTS---GHHVA 755 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~~-----~~p~~K~~~v~~l~~~---g~~v~ 755 (883)
-++.|++.++++.|++.|+++.++|+........+.+.+|+..- .+++. ..|+.. -+.+.+++. .+.++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~~~ 169 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLPYSKPHPE-VYLNCAAKLGVDPLTCV 169 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCCCCCCCHH-HHHHHHHHcCCCHHHeE
Confidence 35789999999999999999999999999999999999998531 22221 122221 222333333 36799
Q ss_pred EEcCCccCHHHHHhCCeeEEeecCC--ccHHHHhhcCEEEeCCChhhHH
Q 002770 756 MVGDGINDAPSLALADVGIALQIEA--QENAASTAASIILLGNKLSQVV 802 (883)
Q Consensus 756 ~vGDg~ND~~al~~AdvgIa~~~~~--~~~~a~~~ad~vl~~~~~~~l~ 802 (883)
||||..||+.+.+.|++....-... ..+.-...+|.++ .++..+.
T Consensus 170 ~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~--~~~~dl~ 216 (222)
T PRK10826 170 ALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKL--ESLTELT 216 (222)
T ss_pred EEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheec--cCHHHHh
Confidence 9999999999999999754331111 1112234577776 3366654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0014 Score=69.79 Aligned_cols=55 Identities=13% Similarity=0.255 Sum_probs=44.3
Q ss_pred EEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCC
Q 002770 668 VVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI 726 (883)
Q Consensus 668 ~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi 726 (883)
+++.-.||. ++ --.+...+.++++|++|+++|+.++++||+.......+.+++|+
T Consensus 3 LIftDLDGT-LL---d~~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl 57 (302)
T PRK12702 3 LVLSSLDGS-LL---DLEFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRL 57 (302)
T ss_pred EEEEeCCCC-Cc---CCCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCC
Confidence 344445554 32 22445778899999999999999999999999999999999997
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00058 Score=68.50 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=73.1
Q ss_pred CCeEEEEEecCceEEEEEEecC----CCChhHHHHHHHHHHCCCEEEEEcCCcHH--------HHHHHHHHcCCCCceEE
Q 002770 665 SKSVVYVGREGEGIIGAIAISD----SLRHDAEHTVRSLQQKGIKTLLLSGDREE--------AVAATAKEVGIGKEYIN 732 (883)
Q Consensus 665 g~~~~~~a~~~~~~lG~i~l~D----~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~--------~a~~ia~~~gi~~~~v~ 732 (883)
+.+.+++-+||. +.|-..+.+ ++-|++.+++++|++.|+++.++|+.... ......+..|+. .++
T Consensus 3 ~~~~~~~d~d~~-~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~--~~~ 79 (173)
T PRK06769 3 NIQAIFIDRDGT-IGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD--DIY 79 (173)
T ss_pred CCcEEEEeCCCc-ccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC--EEE
Confidence 456777777776 544422222 35799999999999999999999987642 233445667885 333
Q ss_pred Ee-c-C----ccch------HHHHHHHhhcCCeEEEEcCCccCHHHHHhCCe-eEEe
Q 002770 733 SS-L-T----PQQK------SEVISTLQTSGHHVAMVGDGINDAPSLALADV-GIAL 776 (883)
Q Consensus 733 ~~-~-~----p~~K------~~~v~~l~~~g~~v~~vGDg~ND~~al~~Adv-gIa~ 776 (883)
.. . . +..| ..+++.+....+.++||||..+|+.+-+.|++ .|.+
T Consensus 80 ~~~~~~~~~~~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v 136 (173)
T PRK06769 80 LCPHKHGDGCECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILV 136 (173)
T ss_pred ECcCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEE
Confidence 21 1 1 1123 44444454445689999999999999999996 4444
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00074 Score=70.40 Aligned_cols=117 Identities=19% Similarity=0.233 Sum_probs=79.9
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--C--ceEEEec-----Cccc--hHHHHHHHhhc-CCe
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG--K--EYINSSL-----TPQQ--KSEVISTLQTS-GHH 753 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~--~--~~v~~~~-----~p~~--K~~~v~~l~~~-g~~ 753 (883)
.++.+|+.+.++.|+++|+++.++|+.....+..+.+.+|+. . +.+++.- .|+. =...++.+.-. ...
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 165 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQS 165 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCChhH
Confidence 367899999999999999999999999999999999999986 1 2333321 1211 12233333323 367
Q ss_pred EEEEcCCccCHHHHHhCCeeE--EeecCCcc--HHHHhhcCEEEeCCChhhHHHH
Q 002770 754 VAMVGDGINDAPSLALADVGI--ALQIEAQE--NAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 754 v~~vGDg~ND~~al~~AdvgI--a~~~~~~~--~~a~~~ad~vl~~~~~~~l~~~ 804 (883)
++||||+.+|+.+-+.|++.. ++..+... ......+|.++ +++..+..+
T Consensus 166 ~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i--~~~~~l~~~ 218 (220)
T TIGR03351 166 VAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVL--DSVADLPAL 218 (220)
T ss_pred eEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceee--cCHHHHHHh
Confidence 999999999999999999875 34212112 12233577776 446666554
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00071 Score=72.30 Aligned_cols=86 Identities=20% Similarity=0.156 Sum_probs=63.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC---ceEEEe-c----Ccc--chHHHHHHHhhc-CCeEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK---EYINSS-L----TPQ--QKSEVISTLQTS-GHHVA 755 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~---~~v~~~-~----~p~--~K~~~v~~l~~~-g~~v~ 755 (883)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.. +.+++. - .|+ -=...++.+.-. .+.++
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~l 178 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDVAACV 178 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCchheE
Confidence 357899999999999999999999999999999999988853 223221 1 121 113333334322 45699
Q ss_pred EEcCCccCHHHHHhCCe
Q 002770 756 MVGDGINDAPSLALADV 772 (883)
Q Consensus 756 ~vGDg~ND~~al~~Adv 772 (883)
||||..+|+.+-+.|++
T Consensus 179 ~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 179 KVGDTVPDIEEGRNAGM 195 (253)
T ss_pred EECCcHHHHHHHHHCCC
Confidence 99999999999999995
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0017 Score=67.46 Aligned_cols=90 Identities=13% Similarity=0.073 Sum_probs=70.8
Q ss_pred CCChhHHHHH-HHHHHCCCEEEEEcCCcHHHHHHHHHHcCC--CCceEEE-------------ecCccchHHHHHHH-hh
Q 002770 687 SLRHDAEHTV-RSLQQKGIKTLLLSGDREEAVAATAKEVGI--GKEYINS-------------SLTPQQKSEVISTL-QT 749 (883)
Q Consensus 687 ~lr~~~~~~i-~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi--~~~~v~~-------------~~~p~~K~~~v~~l-~~ 749 (883)
.+.|++.+.| +.+++.|++++++|+.....+..+++.+|+ ....+.. ++..++|...++.. ..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i~t~l~~~~tg~~~g~~c~g~~K~~~l~~~~~~ 174 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLIASQMQRRYGGWVLTLRCLGHEKVAQLERKIGT 174 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceEEEEEEEEEccEECCccCCChHHHHHHHHHhCC
Confidence 3478999999 578889999999999999999999999994 1112221 24556788777654 33
Q ss_pred cCCeEEEEcCCccCHHHHHhCCeeEEe
Q 002770 750 SGHHVAMVGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 750 ~g~~v~~vGDg~ND~~al~~AdvgIa~ 776 (883)
......+-||..||.|||+.|+-.+++
T Consensus 175 ~~~~~~aY~Ds~~D~pmL~~a~~~~~v 201 (211)
T PRK11590 175 PLRLYSGYSDSKQDNPLLYFCQHRWRV 201 (211)
T ss_pred CcceEEEecCCcccHHHHHhCCCCEEE
Confidence 344556889999999999999999999
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0013 Score=68.13 Aligned_cols=89 Identities=16% Similarity=0.130 Sum_probs=69.5
Q ss_pred CCChhHHHHHH-HHHHCCCEEEEEcCCcHHHHHHHHHHcCC---CCceEEE-------------ecCccchHHHHHHH-h
Q 002770 687 SLRHDAEHTVR-SLQQKGIKTLLLSGDREEAVAATAKEVGI---GKEYINS-------------SLTPQQKSEVISTL-Q 748 (883)
Q Consensus 687 ~lr~~~~~~i~-~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi---~~~~v~~-------------~~~p~~K~~~v~~l-~ 748 (883)
.+.|++.+.|+ .++++|++++++|+-....+..+++..++ . +.+.. ++..++|...++.. .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~~~~ 172 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLIASQIERGNGGWVLPLRCLGHEKVAQLEQKIG 172 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEEEEEeEEeCCceEcCccCCChHHHHHHHHHhC
Confidence 35899999995 88999999999999999999999988544 2 12222 24456788777654 3
Q ss_pred hcCCeEEEEcCCccCHHHHHhCCeeEEe
Q 002770 749 TSGHHVAMVGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 749 ~~g~~v~~vGDg~ND~~al~~AdvgIa~ 776 (883)
.......+-||+.||.|||+.||..+++
T Consensus 173 ~~~~~~~aYsDS~~D~pmL~~a~~~~~V 200 (210)
T TIGR01545 173 SPLKLYSGYSDSKQDNPLLAFCEHRWRV 200 (210)
T ss_pred CChhheEEecCCcccHHHHHhCCCcEEE
Confidence 2334556899999999999999999999
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0012 Score=71.31 Aligned_cols=86 Identities=12% Similarity=0.059 Sum_probs=62.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC---ceEEEe-cCccch---HHHHHHHhhc----CCeEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK---EYINSS-LTPQQK---SEVISTLQTS----GHHVA 755 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~---~~v~~~-~~p~~K---~~~v~~l~~~----g~~v~ 755 (883)
.+-|++.++++.|++.|+++.++||.....+..+.+..|+.. +.+++. -.+..| .-+.+.+++. ...++
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~~e~l 180 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDVAACV 180 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCCcceE
Confidence 457899999999999999999999999999888888776532 233322 111122 2233333333 35699
Q ss_pred EEcCCccCHHHHHhCCe
Q 002770 756 MVGDGINDAPSLALADV 772 (883)
Q Consensus 756 ~vGDg~ND~~al~~Adv 772 (883)
||||+.+|+.+-+.|++
T Consensus 181 ~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 181 KVDDTVPGIEEGLNAGM 197 (267)
T ss_pred EEcCcHHHHHHHHHCCC
Confidence 99999999999999996
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0011 Score=69.38 Aligned_cols=42 Identities=14% Similarity=0.230 Sum_probs=38.8
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCC
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI 726 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi 726 (883)
.+..-+++.++|++|+++|++++++||++...+..+.+++|+
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~ 54 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGV 54 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 456677899999999999999999999999999999999997
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0014 Score=69.76 Aligned_cols=112 Identities=11% Similarity=0.172 Sum_probs=77.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceE-EEec----Ccc--chHHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYI-NSSL----TPQ--QKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v-~~~~----~p~--~K~~~v~~l~~~g~~v~~v 757 (883)
++.|++.++++.|+++|+++.++|+.....+....+.+|+.. +.+ .+.- .|+ --....+.+.-....++||
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~v 187 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVF 187 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEE
Confidence 457899999999999999999999999999999999999862 122 2221 122 2244445554455779999
Q ss_pred cCCccCHHHHHhCCee-EEeecCCc-cHHHHhhcCEEEeCCChhh
Q 002770 758 GDGINDAPSLALADVG-IALQIEAQ-ENAASTAASIILLGNKLSQ 800 (883)
Q Consensus 758 GDg~ND~~al~~Advg-Ia~~~~~~-~~~a~~~ad~vl~~~~~~~ 800 (883)
||..+|+.+-+.|++- |++..+.. .+.....+|+++.+ +..
T Consensus 188 gDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~--~~e 230 (248)
T PLN02770 188 EDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD--YED 230 (248)
T ss_pred cCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc--chh
Confidence 9999999999999963 33311222 22223468888744 444
|
|
| >PLN02957 copper, zinc superoxide dismutase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0011 Score=70.01 Aligned_cols=69 Identities=25% Similarity=0.343 Sum_probs=59.7
Q ss_pred ceEEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCcccccc
Q 002770 71 DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRV 150 (883)
Q Consensus 71 ~~~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~~ 150 (883)
.+++.+.+ ||+|.+|+..|++.+.+.+||..+.+++..+++.+.++ ...+++.+.+++.||.+.+..
T Consensus 5 ~~~~~~~V-gMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~------------~~~~~I~~aIe~~Gy~a~~~~ 71 (238)
T PLN02957 5 ELLTEFMV-DMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGS------------SPVKAMTAALEQTGRKARLIG 71 (238)
T ss_pred cEEEEEEE-CccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEec------------CCHHHHHHHHHHcCCcEEEec
Confidence 45677888 79999999999999999999999999999999999873 246788899999999987664
Q ss_pred cC
Q 002770 151 SG 152 (883)
Q Consensus 151 ~~ 152 (883)
.+
T Consensus 72 ~~ 73 (238)
T PLN02957 72 QG 73 (238)
T ss_pred CC
Confidence 43
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0018 Score=69.39 Aligned_cols=113 Identities=12% Similarity=0.137 Sum_probs=78.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEe-c----Cc--cchHHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-L----TP--QQKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~-~----~p--~~K~~~v~~l~~~g~~v~~v 757 (883)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+.. +.+.+. - .| +-=...++.+.-....++||
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~l~I 188 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERCIVF 188 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHeEEE
Confidence 457899999999999999999999999999999999999852 122221 1 22 11134444444445679999
Q ss_pred cCCccCHHHHHhCCe-eEEeecCCccHHHHhhcCEEEeCCChhhHH
Q 002770 758 GDGINDAPSLALADV-GIALQIEAQENAASTAASIILLGNKLSQVV 802 (883)
Q Consensus 758 GDg~ND~~al~~Adv-gIa~~~~~~~~~a~~~ad~vl~~~~~~~l~ 802 (883)
||..+|+.+-+.|++ .|++. +.........+|+++.+ +..+.
T Consensus 189 gDs~~Di~aA~~aG~~~i~v~-g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 189 GNSNSSVEAAHDGCMKCVAVA-GKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred cCCHHHHHHHHHcCCEEEEEe-cCCchhhhccCCEEeCC--HHHHH
Confidence 999999999999997 34442 22222233457887633 55543
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0024 Score=68.00 Aligned_cols=52 Identities=13% Similarity=0.315 Sum_probs=39.5
Q ss_pred eEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHH
Q 002770 667 SVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAK 722 (883)
Q Consensus 667 ~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~ 722 (883)
.++++-.||. ++ .=..++.+.++++|++++++|++++++||++........+
T Consensus 6 klia~DlDGT-LL---~~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~ 57 (247)
T PTZ00174 6 TILLFDVDGT-LT---KPRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLG 57 (247)
T ss_pred eEEEEECcCC-Cc---CCCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHh
Confidence 4555555654 32 1223589999999999999999999999999997776554
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0016 Score=62.03 Aligned_cols=87 Identities=17% Similarity=0.306 Sum_probs=65.0
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCc--------HHHHHHHHHHcCCCCceEEEe---cCccc--hHHHHHHHh-hcC
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDR--------EEAVAATAKEVGIGKEYINSS---LTPQQ--KSEVISTLQ-TSG 751 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~--------~~~a~~ia~~~gi~~~~v~~~---~~p~~--K~~~v~~l~-~~g 751 (883)
-++.+++.+++++|++.|++++++|+.. ......+.+.+|+.....+.. ..|+. =..+++.++ -..
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~ 103 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDVLYACPHCRKPKPGMFLEALKRFNEIDP 103 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEEEEECCCCCCCChHHHHHHHHHcCCCCh
Confidence 3578999999999999999999999998 778888999999863322211 12211 134444442 445
Q ss_pred CeEEEEcC-CccCHHHHHhCCe
Q 002770 752 HHVAMVGD-GINDAPSLALADV 772 (883)
Q Consensus 752 ~~v~~vGD-g~ND~~al~~Adv 772 (883)
+.++|||| ..+|+.+.+.+++
T Consensus 104 ~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 104 EESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred hheEEEcCCCcccHHHHHHCCC
Confidence 78999999 5999999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0035 Score=74.16 Aligned_cols=57 Identities=21% Similarity=0.285 Sum_probs=44.0
Q ss_pred CeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCC
Q 002770 666 KSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI 726 (883)
Q Consensus 666 ~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi 726 (883)
..+++.-.||. ++. -.+.+.+.+.++|++|+++|+.++++||+....+..+++++|+
T Consensus 416 ~KLIfsDLDGT-LLd---~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 416 KKIVYTDLDGT-LLN---PLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred eeEEEEECcCC-CcC---CCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 34555555665 321 1223556889999999999999999999999999999999986
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0011 Score=69.64 Aligned_cols=83 Identities=18% Similarity=0.155 Sum_probs=60.8
Q ss_pred ChhHHHHHHHHHHCCCEEEEEcCC----cHHHHHHHHHHcCCCC--ceEEEe-cCccchHHHHHHHhhcCCeEEEEcCCc
Q 002770 689 RHDAEHTVRSLQQKGIKTLLLSGD----REEAVAATAKEVGIGK--EYINSS-LTPQQKSEVISTLQTSGHHVAMVGDGI 761 (883)
Q Consensus 689 r~~~~~~i~~L~~~Gi~v~~lTGd----~~~~a~~ia~~~gi~~--~~v~~~-~~p~~K~~~v~~l~~~g~~v~~vGDg~ 761 (883)
.+++++.++.++++|+++.++|+. ...++..+.+.+|++. +.+++. .....|......+++.+ .++|+||..
T Consensus 116 ~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~~~l~~~~-i~i~vGDs~ 194 (237)
T TIGR01672 116 KEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKTQWIQDKN-IRIHYGDSD 194 (237)
T ss_pred hhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHHHHHHhCC-CeEEEeCCH
Confidence 445999999999999999999998 7789999999999963 122221 11111211223445555 479999999
Q ss_pred cCHHHHHhCCe
Q 002770 762 NDAPSLALADV 772 (883)
Q Consensus 762 ND~~al~~Adv 772 (883)
||..+-+.|++
T Consensus 195 ~DI~aAk~AGi 205 (237)
T TIGR01672 195 NDITAAKEAGA 205 (237)
T ss_pred HHHHHHHHCCC
Confidence 99999999985
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.002 Score=75.16 Aligned_cols=120 Identities=15% Similarity=0.227 Sum_probs=82.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEE-e-cCccchHHHHHH-Hhh-cCCeEEEEcCC
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINS-S-LTPQQKSEVIST-LQT-SGHHVAMVGDG 760 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~-~-~~p~~K~~~v~~-l~~-~g~~v~~vGDg 760 (883)
++.||+.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+.+ + ..+..|-+.+.. +++ ..+.++||||.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~~~~kP~~~~~al~~l~~~~~v~VGDs 409 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQINSLNKSDLVKSILNKYDIKEAAVVGDR 409 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCCCCCCcHHHHHHHHhcCcceEEEEeCC
Confidence 568999999999999999999999999999999999999852 12222 1 111123223222 222 24679999999
Q ss_pred ccCHHHHHhCCe-eEEeecCCccHHHHhhcCEEEeCCChhhHHHHHHHH
Q 002770 761 INDAPSLALADV-GIALQIEAQENAASTAASIILLGNKLSQVVDALDLA 808 (883)
Q Consensus 761 ~ND~~al~~Adv-gIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~~~ 808 (883)
.+|+.+-+.|++ .|++..+...+.....+|+++ +++..+..++...
T Consensus 410 ~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~~ 456 (459)
T PRK06698 410 LSDINAAKDNGLIAIGCNFDFAQEDELAQADIVI--DDLLELKGILSTV 456 (459)
T ss_pred HHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEe--CCHHHHHHHHHHH
Confidence 999999999996 444422222222234688887 4577777766544
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0012 Score=64.12 Aligned_cols=90 Identities=19% Similarity=0.193 Sum_probs=74.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcC----CCCceEEEe------------------cCccchHHHH
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVG----IGKEYINSS------------------LTPQQKSEVI 744 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~g----i~~~~v~~~------------------~~p~~K~~~v 744 (883)
.++|+-++.++.+++++++++++|+....-...+-++++ |...+++++ .--.+|...|
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK~~vI 152 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDKSSVI 152 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCcchhH
Confidence 368999999999999999999999999999998888887 432222211 1234799999
Q ss_pred HHHhhcCCeEEEEcCCccCHHHHHhCCeeEEe
Q 002770 745 STLQTSGHHVAMVGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 745 ~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~ 776 (883)
+.|++..+.+.|+|||+.|..|-+.+|+-.|=
T Consensus 153 ~~l~e~~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 153 HELSEPNESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred HHhhcCCceEEEecCCcccccHhhhhhhHhhH
Confidence 99999999999999999999999998887764
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0041 Score=62.79 Aligned_cols=118 Identities=19% Similarity=0.213 Sum_probs=72.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcH---------------HHHHHHHHHcCCCCceEEEe----------cCc--cc
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDRE---------------EAVAATAKEVGIGKEYINSS----------LTP--QQ 739 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~---------------~~a~~ia~~~gi~~~~v~~~----------~~p--~~ 739 (883)
.+.+++.+++++|++.|+++.++|..+. .....+.+..|+.-+.++.. ..| +-
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~~i~~~~~~~~~~~~~~KP~p~~ 108 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLDGIYYCPHHPEDGCDCRKPKPGM 108 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccceEEECCCCCCCCCcCCCCCHHH
Confidence 3578999999999999999999998762 22233445567632233321 112 22
Q ss_pred hHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCee-EEeecCCccH-HHHhhc--CEEEeCCChhhHHHHHH
Q 002770 740 KSEVISTLQTSGHHVAMVGDGINDAPSLALADVG-IALQIEAQEN-AASTAA--SIILLGNKLSQVVDALD 806 (883)
Q Consensus 740 K~~~v~~l~~~g~~v~~vGDg~ND~~al~~Advg-Ia~~~~~~~~-~a~~~a--d~vl~~~~~~~l~~~i~ 806 (883)
-...++.+.-..+.++||||..+|+.+-+.|++. |.+..+.... .....+ |+++ +++..+..++.
T Consensus 109 ~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii--~~l~el~~~l~ 177 (181)
T PRK08942 109 LLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVL--DSLADLPQALK 177 (181)
T ss_pred HHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceee--cCHHHHHHHHH
Confidence 2344444544557899999999999999999963 3331122211 122235 7776 44777666543
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0011 Score=68.03 Aligned_cols=86 Identities=19% Similarity=0.161 Sum_probs=64.1
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEE------ecCccchHHHHHHHhhcCCeEEE
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINS------SLTPQQKSEVISTLQTSGHHVAM 756 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~------~~~p~~K~~~v~~l~~~g~~v~~ 756 (883)
.+++.+++.++++.|++.|+++.++||.+...+..+.+.+|+..- .+.+ ...|+.-..+++.+.-....++|
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDCPPKPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCCCCCcCHHHHHHHHHHhCcCcccEEE
Confidence 344666779999999999999999999999999999999998521 1111 11222224455555555678999
Q ss_pred EcCCccCHHHHHhC
Q 002770 757 VGDGINDAPSLALA 770 (883)
Q Consensus 757 vGDg~ND~~al~~A 770 (883)
|||+.+|+.+-+.|
T Consensus 184 vGD~~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDTVDDIITGRKA 197 (197)
T ss_pred EeCCHHHHHHHHhC
Confidence 99999999987764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0023 Score=67.21 Aligned_cols=85 Identities=20% Similarity=0.254 Sum_probs=63.6
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCc----HHHHHHHHHHcCCCCc----eEEEecCc--cchHHHHHHHhhcCCeEEEE
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDR----EEAVAATAKEVGIGKE----YINSSLTP--QQKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~----~~~a~~ia~~~gi~~~----~v~~~~~p--~~K~~~v~~l~~~g~~v~~v 757 (883)
+.+++++.++.|++.|+++.++||+. ..++..+.+..|++.+ .+++.-++ ++|... +++.+ .++|+
T Consensus 115 p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~~K~~K~~~---l~~~~-i~I~I 190 (237)
T PRK11009 115 PKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKPGQYTKTQW---LKKKN-IRIFY 190 (237)
T ss_pred chHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCCCCCCHHHH---HHhcC-CeEEE
Confidence 57889999999999999999999964 6688999999999321 22322222 345543 44444 48999
Q ss_pred cCCccCHHHHHhCCe-eEEe
Q 002770 758 GDGINDAPSLALADV-GIAL 776 (883)
Q Consensus 758 GDg~ND~~al~~Adv-gIa~ 776 (883)
||..+|..+-+.|++ +|.+
T Consensus 191 GDs~~Di~aA~~AGi~~I~v 210 (237)
T PRK11009 191 GDSDNDITAAREAGARGIRI 210 (237)
T ss_pred cCCHHHHHHHHHcCCcEEEE
Confidence 999999999999996 4444
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0045 Score=64.49 Aligned_cols=108 Identities=16% Similarity=0.118 Sum_probs=73.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc-eEEEe-----cCcc--chHHHHHHHhhcCCeEEEEc
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE-YINSS-----LTPQ--QKSEVISTLQTSGHHVAMVG 758 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~-~v~~~-----~~p~--~K~~~v~~l~~~g~~v~~vG 758 (883)
++.|++.++++.|+++|+++.++|+.+...+...-+..|+... .+.+. ..|+ -=....+.+.-....++|||
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~~l~ig 162 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVVVE 162 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCccEEEEHHHhcCCCCCcHHHHHHHHHcCCCcccEEEEe
Confidence 4678999999999999999999999887777777777887422 22221 1222 11333344444457899999
Q ss_pred CCccCHHHHHhCCe-eEEeecCCccHHHHhhcCEEEeC
Q 002770 759 DGINDAPSLALADV-GIALQIEAQENAASTAASIILLG 795 (883)
Q Consensus 759 Dg~ND~~al~~Adv-gIa~~~~~~~~~a~~~ad~vl~~ 795 (883)
|..+|+.+-+.|++ .|++..+. .......+|+++.+
T Consensus 163 Ds~~di~aA~~aG~~~i~v~~~~-~~~~~~~~~~~~~~ 199 (218)
T PRK11587 163 DAPAGVLSGLAAGCHVIAVNAPA-DTPRLDEVDLVLHS 199 (218)
T ss_pred cchhhhHHHHHCCCEEEEECCCC-chhhhccCCEEecc
Confidence 99999999999997 46662222 22233457777633
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0034 Score=64.57 Aligned_cols=40 Identities=18% Similarity=0.390 Sum_probs=36.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCC
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI 726 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi 726 (883)
++.+++.+++++|++.|++++++||+....+..+.+.++.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~ 56 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPL 56 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999887553
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0047 Score=69.10 Aligned_cols=110 Identities=16% Similarity=0.194 Sum_probs=78.1
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEe-----cCcc--chHHHHHHHhhcCCeEEEEc
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-----LTPQ--QKSEVISTLQTSGHHVAMVG 758 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~--~K~~~v~~l~~~g~~v~~vG 758 (883)
+.+|+.+.++.|+++|+++.++|+.+...+..+-+.+||.. +.+++. -.|+ -=...++.+.-....++|||
T Consensus 217 l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Peecl~IG 296 (381)
T PLN02575 217 LRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPERCIVFG 296 (381)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCcccEEEEc
Confidence 57899999999999999999999999999999999999853 122221 1222 12344555555567899999
Q ss_pred CCccCHHHHHhCCe-eEEeecCCccH-HHHhhcCEEEeCCChhhH
Q 002770 759 DGINDAPSLALADV-GIALQIEAQEN-AASTAASIILLGNKLSQV 801 (883)
Q Consensus 759 Dg~ND~~al~~Adv-gIa~~~~~~~~-~a~~~ad~vl~~~~~~~l 801 (883)
|..+|+.|-+.|++ .|++ ..+.+ .-...+|+++ +++..+
T Consensus 297 DS~~DIeAAk~AGm~~IgV--~~~~~~~~l~~Ad~iI--~s~~EL 337 (381)
T PLN02575 297 NSNQTVEAAHDARMKCVAV--ASKHPIYELGAADLVV--RRLDEL 337 (381)
T ss_pred CCHHHHHHHHHcCCEEEEE--CCCCChhHhcCCCEEE--CCHHHH
Confidence 99999999999997 3343 22222 2223588876 446655
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0032 Score=65.61 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=66.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEe-----cCccch--HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-----LTPQQK--SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~~K--~~~v~~l~~~g~~v~~v 757 (883)
++.|++.+++++|+++|++++++|+-+...+....+.+|+.. +.+++. ..|+.. ..+.+.+.-....++||
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~i 173 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMV 173 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhhEEEE
Confidence 468899999999999999999999998888888899999852 122221 123221 23333333334679999
Q ss_pred cCCc-cCHHHHHhCCe-eEEe
Q 002770 758 GDGI-NDAPSLALADV-GIAL 776 (883)
Q Consensus 758 GDg~-ND~~al~~Adv-gIa~ 776 (883)
||.. +|+.+-+.|++ .|.+
T Consensus 174 gDs~~~di~~A~~aG~~~i~~ 194 (221)
T TIGR02253 174 GDRLDKDIKGAKNLGMKTVWI 194 (221)
T ss_pred CCChHHHHHHHHHCCCEEEEE
Confidence 9998 99999999997 4555
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0015 Score=64.22 Aligned_cols=69 Identities=23% Similarity=0.369 Sum_probs=59.1
Q ss_pred ceEEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCcccccc
Q 002770 71 DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRV 150 (883)
Q Consensus 71 ~~~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~~ 150 (883)
.-+.+|.|+ |+|.+|+..|++.|+.++||.++.++++...+.|.-.. .+.++.+.++.+|-++-++.
T Consensus 6 ~~~~efaV~-M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~------------p~s~i~~~le~tGr~Avl~G 72 (247)
T KOG4656|consen 6 TYEAEFAVQ-MTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSV------------PPSEIQNTLENTGRDAVLRG 72 (247)
T ss_pred ceeEEEEEe-chhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccC------------ChHHHHHHHHhhChheEEec
Confidence 345667765 99999999999999999999999999999998887433 56899999999999998875
Q ss_pred cC
Q 002770 151 SG 152 (883)
Q Consensus 151 ~~ 152 (883)
.+
T Consensus 73 ~G 74 (247)
T KOG4656|consen 73 AG 74 (247)
T ss_pred CC
Confidence 54
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0033 Score=63.13 Aligned_cols=117 Identities=21% Similarity=0.309 Sum_probs=86.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc-------------------------------------
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE------------------------------------- 729 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~------------------------------------- 729 (883)
.+-|++.++++.|++. ...+++|-.-.+-+.++|+.+|++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4578999999999876 56677777777888999999998422
Q ss_pred -----eEEEecCccch---------------HHHHHHHhhc---CCeEEEEcCCccCHHHHHhCC----eeEEeecCCcc
Q 002770 730 -----YINSSLTPQQK---------------SEVISTLQTS---GHHVAMVGDGINDAPSLALAD----VGIALQIEAQE 782 (883)
Q Consensus 730 -----~v~~~~~p~~K---------------~~~v~~l~~~---g~~v~~vGDg~ND~~al~~Ad----vgIa~~~~~~~ 782 (883)
.+|.++.|.+- .++++.+.+. ....++|||.+.|..||+.+. +.||+ ||.
T Consensus 162 fe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaF---NGN 238 (315)
T COG4030 162 FEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAF---NGN 238 (315)
T ss_pred HHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEe---cCC
Confidence 23455555443 3333333322 245789999999999999873 66666 667
Q ss_pred HHHHhhcCEEEeCCChhhHHHHHHH
Q 002770 783 NAASTAASIILLGNKLSQVVDALDL 807 (883)
Q Consensus 783 ~~a~~~ad~vl~~~~~~~l~~~i~~ 807 (883)
+-+...||+-+.+++...+..+|++
T Consensus 239 eYal~eAdVAvisp~~~a~~pviel 263 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIEL 263 (315)
T ss_pred cccccccceEEeccchhhhhHHHHH
Confidence 7888999999999999998888876
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0034 Score=64.31 Aligned_cols=87 Identities=16% Similarity=0.233 Sum_probs=65.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEE-e----cCccch--HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINS-S----LTPQQK--SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~-~----~~p~~K--~~~v~~l~~~g~~v~~v 757 (883)
++.+++.+++++|+++|+++.++|+-+........+.+|+.. +.+++ . ..|+.. ..+.+.+.-....++||
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~~~~v 171 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDEVLFV 171 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhhEEEE
Confidence 467999999999999999999999999999999999999842 12322 1 123211 33344444445789999
Q ss_pred cCCccCHHHHHhCCee
Q 002770 758 GDGINDAPSLALADVG 773 (883)
Q Consensus 758 GDg~ND~~al~~Advg 773 (883)
||+.+|+.+-+.+++-
T Consensus 172 gD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 172 ASNPWDLGGAKKFGFK 187 (198)
T ss_pred eCCHHHHHHHHHCCCc
Confidence 9999999999999974
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0046 Score=62.13 Aligned_cols=112 Identities=18% Similarity=0.200 Sum_probs=68.9
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcH---------------HHHHHHHHHcCCCCceEEE-e---------------cC
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDRE---------------EAVAATAKEVGIGKEYINS-S---------------LT 736 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~---------------~~a~~ia~~~gi~~~~v~~-~---------------~~ 736 (883)
+.|++.++|++|+++|+++.++|.-+. .....+.++.|+.-+.++. . ..
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~K 106 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEGVEEFRQVCDCRK 106 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcccccccCCCCCCC
Confidence 468999999999999999999997763 2223445555654333332 1 12
Q ss_pred ccc--hHHHHHHHhhcCCeEEEEcCCccCHHHHHhCCee--EEeecCCcc-HHHHhhcCEEEeCCChhhH
Q 002770 737 PQQ--KSEVISTLQTSGHHVAMVGDGINDAPSLALADVG--IALQIEAQE-NAASTAASIILLGNKLSQV 801 (883)
Q Consensus 737 p~~--K~~~v~~l~~~g~~v~~vGDg~ND~~al~~Advg--Ia~~~~~~~-~~a~~~ad~vl~~~~~~~l 801 (883)
|+- =....+.+.-....++||||..+|+.+-+.|++. |.+..+... ......+|+++. ++..|
T Consensus 107 P~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~--~~~el 174 (176)
T TIGR00213 107 PKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLN--SLADL 174 (176)
T ss_pred CCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEec--cHHHh
Confidence 221 1222333333357799999999999999999984 344222221 112234888873 35554
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0021 Score=70.48 Aligned_cols=90 Identities=11% Similarity=0.019 Sum_probs=69.7
Q ss_pred ecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCce---EEE--------------ecCccchHHHHHH
Q 002770 684 ISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEY---INS--------------SLTPQQKSEVIST 746 (883)
Q Consensus 684 l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~---v~~--------------~~~p~~K~~~v~~ 746 (883)
..+++.+++.+++++|++.|++++++||.+...+..+.+.+|+.... +.+ .-.|+-+...++.
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 46789999999999999999999999999999999999998875200 111 1123344555555
Q ss_pred Hhh-cCCeEEEEcCCccCHHHHHhCCee
Q 002770 747 LQT-SGHHVAMVGDGINDAPSLALADVG 773 (883)
Q Consensus 747 l~~-~g~~v~~vGDg~ND~~al~~Advg 773 (883)
+.. ....++||||..+|+.+-+.|++-
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~ 291 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLE 291 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCe
Confidence 433 336799999999999999999975
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0054 Score=61.24 Aligned_cols=92 Identities=11% Similarity=0.082 Sum_probs=67.7
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCC-cHHHHHHHHHHcCCC---------C--ceEEEecCcc-ch--HHHHHHHhh
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGD-REEAVAATAKEVGIG---------K--EYINSSLTPQ-QK--SEVISTLQT 749 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd-~~~~a~~ia~~~gi~---------~--~~v~~~~~p~-~K--~~~v~~l~~ 749 (883)
+-++.+++.++++.|+++|+++.++|+. ....+..+.+.+|+. . +.+.+.-.+. .| ..+.+.+.+
T Consensus 43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~~~ 122 (174)
T TIGR01685 43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKVNK 122 (174)
T ss_pred EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHhhh
Confidence 3356899999999999999999999976 888999999999985 2 1223222222 22 233444443
Q ss_pred c------CCeEEEEcCCccCHHHHHhCCeeEEe
Q 002770 750 S------GHHVAMVGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 750 ~------g~~v~~vGDg~ND~~al~~AdvgIa~ 776 (883)
. ...++||||...|+.+-+.|++-...
T Consensus 123 ~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 123 VDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred cccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 2 36899999999999999999975544
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0039 Score=67.85 Aligned_cols=113 Identities=17% Similarity=0.144 Sum_probs=72.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCC---CCc-eEE-EecCccch------HHHHHHHhhcCCeEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI---GKE-YIN-SSLTPQQK------SEVISTLQTSGHHVA 755 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi---~~~-~v~-~~~~p~~K------~~~v~~l~~~g~~v~ 755 (883)
++.|++.+.++.|++.|+++.++|+.+......+-+..+. ... .++ +...+..| ..+++.+.-....++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l 223 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVPKKKPDPDIYNLAAETLGVDPSRCV 223 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccCCCCCCHHHHHHHHHHhCcChHHEE
Confidence 4689999999999999999999999988888877766532 111 122 11111112 334444444457799
Q ss_pred EEcCCccCHHHHHhCCeeEE-eecCCccHHHHhhcCEEEeCCChhhH
Q 002770 756 MVGDGINDAPSLALADVGIA-LQIEAQENAASTAASIILLGNKLSQV 801 (883)
Q Consensus 756 ~vGDg~ND~~al~~AdvgIa-~~~~~~~~~a~~~ad~vl~~~~~~~l 801 (883)
||||+.+|+.+-+.|++... +..+.........+|+++. ++..+
T Consensus 224 ~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~--~~~~l 268 (286)
T PLN02779 224 VVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD--CLGDV 268 (286)
T ss_pred EEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC--Chhhc
Confidence 99999999999999996433 3112111112245788873 34444
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0024 Score=63.25 Aligned_cols=87 Identities=20% Similarity=0.281 Sum_probs=67.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC--CceEEEec-----Ccc--chHHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG--KEYINSSL-----TPQ--QKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~--~~~v~~~~-----~p~--~K~~~v~~l~~~g~~v~~v 757 (883)
++.+++.+.++.|++.|++++++|+.+........+++|+. -+.+++.- .|+ -=..+++.+.-....+++|
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~v 156 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILFV 156 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEEE
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEEE
Confidence 46889999999999999999999999999999999999986 23444321 121 1134444454456789999
Q ss_pred cCCccCHHHHHhCCee
Q 002770 758 GDGINDAPSLALADVG 773 (883)
Q Consensus 758 GDg~ND~~al~~Advg 773 (883)
||..+|+.+-+.||+-
T Consensus 157 gD~~~d~~~A~~~G~~ 172 (176)
T PF13419_consen 157 GDSPSDVEAAKEAGIK 172 (176)
T ss_dssp ESSHHHHHHHHHTTSE
T ss_pred eCCHHHHHHHHHcCCe
Confidence 9999999999999864
|
... |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0048 Score=61.69 Aligned_cols=108 Identities=18% Similarity=0.239 Sum_probs=74.2
Q ss_pred CCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCc-HHHHHHHHHHcCCCCceEEEecCccch--
Q 002770 664 YSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDR-EEAVAATAKEVGIGKEYINSSLTPQQK-- 740 (883)
Q Consensus 664 ~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~-~~~a~~ia~~~gi~~~~v~~~~~p~~K-- 740 (883)
.+.+.+++..++. +.-. =...+-+++.+++++|++.|++++++|+.+ ...+..+.+.+|+. .+.....|...
T Consensus 23 ~~v~~vv~D~Dgt-l~~~--~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~--~~~~~~KP~p~~~ 97 (170)
T TIGR01668 23 VGIKGVVLDKDNT-LVYP--DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIP--VLPHAVKPPGCAF 97 (170)
T ss_pred CCCCEEEEecCCc-cccC--CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCE--EEcCCCCCChHHH
Confidence 4556666666654 2200 123578999999999999999999999988 67788888899984 22222344322
Q ss_pred HHHHHHHhhcCCeEEEEcCCc-cCHHHHHhCCe-eEEe
Q 002770 741 SEVISTLQTSGHHVAMVGDGI-NDAPSLALADV-GIAL 776 (883)
Q Consensus 741 ~~~v~~l~~~g~~v~~vGDg~-ND~~al~~Adv-gIa~ 776 (883)
..+.+.+.-....++||||.. .|..+-+.|++ +|.+
T Consensus 98 ~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v 135 (170)
T TIGR01668 98 RRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILV 135 (170)
T ss_pred HHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEE
Confidence 223333333356799999998 79999999997 4444
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.014 Score=57.56 Aligned_cols=89 Identities=17% Similarity=0.194 Sum_probs=65.0
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHH---HHHHH-----cCCCCceEEE--------------ecCccc-hH
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVA---ATAKE-----VGIGKEYINS--------------SLTPQQ-KS 741 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~---~ia~~-----~gi~~~~v~~--------------~~~p~~-K~ 741 (883)
+|.+.+++.+++++++++|++++++||++...+. ...++ .+++...+.. .-.|+. |.
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 4788999999999999999999999999999884 55555 2343222221 112333 77
Q ss_pred HHHHHHhh-----cCCeEEEEcCCccCHHHHHhCCee
Q 002770 742 EVISTLQT-----SGHHVAMVGDGINDAPSLALADVG 773 (883)
Q Consensus 742 ~~v~~l~~-----~g~~v~~vGDg~ND~~al~~Advg 773 (883)
+.++.+++ ....++.+||+.+|+.+-+++++-
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 78887776 235667799999999999887653
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.011 Score=73.01 Aligned_cols=133 Identities=14% Similarity=0.191 Sum_probs=90.0
Q ss_pred CCeEEEEEecCceEEEEEEe--cCCCChhHHHHHHHHHH-CCCEEEEEcCCcHHHHHHHHHHcCCC--------------
Q 002770 665 SKSVVYVGREGEGIIGAIAI--SDSLRHDAEHTVRSLQQ-KGIKTLLLSGDREEAVAATAKEVGIG-------------- 727 (883)
Q Consensus 665 g~~~~~~a~~~~~~lG~i~l--~D~lr~~~~~~i~~L~~-~Gi~v~~lTGd~~~~a~~ia~~~gi~-------------- 727 (883)
..+++++-+||. ++....- ...+.+++.+++++|.+ .|+.++++||+...........+++.
T Consensus 491 ~~rLi~~D~DGT-L~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~ 569 (726)
T PRK14501 491 SRRLLLLDYDGT-LVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGG 569 (726)
T ss_pred cceEEEEecCcc-ccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCC
Confidence 357788888886 5542111 12367899999999999 59999999999999888776655540
Q ss_pred ------C-c--------------------------------------------------------------e-----EEE
Q 002770 728 ------K-E--------------------------------------------------------------Y-----INS 733 (883)
Q Consensus 728 ------~-~--------------------------------------------------------------~-----v~~ 733 (883)
. + . .+.
T Consensus 570 ~w~~~~~~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~v 649 (726)
T PRK14501 570 EWQLLEPVATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVV 649 (726)
T ss_pred ceEECCCcchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEE
Confidence 0 0 0 000
Q ss_pred ecCcc--chHHHHHHHhhc--CCeEEEEcCCccCHHHHHhC---CeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHHH
Q 002770 734 SLTPQ--QKSEVISTLQTS--GHHVAMVGDGINDAPSLALA---DVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 734 ~~~p~--~K~~~v~~l~~~--g~~v~~vGDg~ND~~al~~A---dvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i~ 806 (883)
++.|. +|...++.+.+. ...++++||+.||.+|++.+ +.+|+| +++ +.+|++++.+ -+.+..+++
T Consensus 650 eV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~v--G~~----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 650 EVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKV--GPG----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred EEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEE--CCC----CCcceEeCCC--HHHHHHHHH
Confidence 12222 466666666553 25899999999999999986 588888 553 4678888865 355555543
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0039 Score=65.33 Aligned_cols=90 Identities=13% Similarity=0.206 Sum_probs=66.2
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEE-EecCccch--HHH----HHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYIN-SSLTPQQK--SEV----ISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K--~~~----v~~l~~~g~~v~~v 757 (883)
.+.+++.+.++.|+++|+++.++|+.+...+....+..|+.. +.++ +.-....| .++ .+.+.-....++||
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~i 172 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAERTLFI 172 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHHEEEE
Confidence 567899999999999999999999998888888888888842 1232 22111122 223 33333345679999
Q ss_pred cCCccCHHHHHhCCee--EEe
Q 002770 758 GDGINDAPSLALADVG--IAL 776 (883)
Q Consensus 758 GDg~ND~~al~~Advg--Ia~ 776 (883)
||..+|+.+-+.|++. +++
T Consensus 173 gDs~~di~aA~~aG~~~~~~v 193 (224)
T PRK14988 173 DDSEPILDAAAQFGIRYCLGV 193 (224)
T ss_pred cCCHHHHHHHHHcCCeEEEEE
Confidence 9999999999999985 445
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0065 Score=58.68 Aligned_cols=106 Identities=19% Similarity=0.287 Sum_probs=82.2
Q ss_pred CCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCceEEEecCccch-
Q 002770 662 SNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQK- 740 (883)
Q Consensus 662 ~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K- 740 (883)
...|.+.+.+-.|+. ++..= ..+..|++++-+++++.+|++++++|..++..+...++.+|++ .++-...|-.+
T Consensus 24 ~~~Gikgvi~DlDNT-Lv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~--fi~~A~KP~~~~ 98 (175)
T COG2179 24 KAHGIKGVILDLDNT-LVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP--FIYRAKKPFGRA 98 (175)
T ss_pred HHcCCcEEEEeccCc-eeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc--eeecccCccHHH
Confidence 456777788777776 44321 3456899999999999999999999999999999999999997 77776777765
Q ss_pred -HHHHHHHhhcCCeEEEEcCC-ccCHHHHHhCCe
Q 002770 741 -SEVISTLQTSGHHVAMVGDG-INDAPSLALADV 772 (883)
Q Consensus 741 -~~~v~~l~~~g~~v~~vGDg-~ND~~al~~Adv 772 (883)
.+.++.++-..+.|+||||. ..|+-+=..+++
T Consensus 99 fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 99 FRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred HHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 23444444456789999997 578877777765
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0059 Score=63.60 Aligned_cols=115 Identities=17% Similarity=0.222 Sum_probs=76.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEe-c----Cccch--HHHHHHH-hhcCCeEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-L----TPQQK--SEVISTL-QTSGHHVAM 756 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~-~----~p~~K--~~~v~~l-~~~g~~v~~ 756 (883)
++.+++.+.+++|++. ++++++|+-....+..+.+.+|+.. +.+++. . .|+.. ...++.+ .-....++|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~ 175 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLM 175 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEE
Confidence 4678999999999999 9999999999999999999999842 233332 1 23221 3334444 333467999
Q ss_pred EcCCc-cCHHHHHhCCe-eEEeecCCccHHHHhhcCEEEeCCChhhHHHH
Q 002770 757 VGDGI-NDAPSLALADV-GIALQIEAQENAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 757 vGDg~-ND~~al~~Adv-gIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~ 804 (883)
|||.. +|+.+-+.+++ +|.+..+..+......++.++ +++..+..+
T Consensus 176 igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~--~~~~el~~~ 223 (224)
T TIGR02254 176 IGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEI--RSLEELYEI 223 (224)
T ss_pred ECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEE--CCHHHHHhh
Confidence 99998 89999999996 444421222212223466665 446666543
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0086 Score=62.55 Aligned_cols=116 Identities=17% Similarity=0.225 Sum_probs=74.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceE-EEec----Cccch--HHHHHHHhhc-CCeEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYI-NSSL----TPQQK--SEVISTLQTS-GHHVAM 756 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v-~~~~----~p~~K--~~~v~~l~~~-g~~v~~ 756 (883)
++.|++.++++.|+ .|+++.++|+.....+....+.+|+.. +.+ .+.- .|+.. ..+++.+.-. ...++|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~ 173 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLM 173 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 36789999999999 689999999998888888888999842 123 2322 22211 2233333322 257999
Q ss_pred EcCCc-cCHHHHHhCCee-EEeecCCccHHHHhhcCEEEeCCChhhHHHHH
Q 002770 757 VGDGI-NDAPSLALADVG-IALQIEAQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 757 vGDg~-ND~~al~~Advg-Ia~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i 805 (883)
|||.. +|+.+-+.|++- |.+..+...+.....+|+++ +++..+..++
T Consensus 174 vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i--~~~~el~~~l 222 (224)
T PRK09449 174 VGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQV--SSLSELEQLL 222 (224)
T ss_pred EcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEE--CCHHHHHHHH
Confidence 99998 799999999984 44421111111112467776 4477766554
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0066 Score=68.84 Aligned_cols=107 Identities=15% Similarity=0.172 Sum_probs=71.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHH-HcCCCC--ceEEEe-----cCcc--chHHHHHHHhhcCCeEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAK-EVGIGK--EYINSS-----LTPQ--QKSEVISTLQTSGHHVAM 756 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~-~~gi~~--~~v~~~-----~~p~--~K~~~v~~l~~~g~~v~~ 756 (883)
++.+++.+.+++|++.|+++.++|+.....+....+ ..|+.. +.+.+. ..|+ -=..+++.+.-..+.++|
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~~l~ 172 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLV 172 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhHEEE
Confidence 357999999999999999999999999888887765 677742 123221 1221 113344444444578999
Q ss_pred EcCCccCHHHHHhCCee-EEeecCCccHHHHhhcCEEE
Q 002770 757 VGDGINDAPSLALADVG-IALQIEAQENAASTAASIIL 793 (883)
Q Consensus 757 vGDg~ND~~al~~Advg-Ia~~~~~~~~~a~~~ad~vl 793 (883)
|||..+|+.+-+.|++. |++..+.........+|.++
T Consensus 173 VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i 210 (382)
T PLN02940 173 IEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVI 210 (382)
T ss_pred EeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEe
Confidence 99999999999999974 44421222222334566665
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0054 Score=59.70 Aligned_cols=87 Identities=17% Similarity=0.286 Sum_probs=61.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcH---------------HHHHHHHHHcCCCCce-EEEec---------Cccch-
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDRE---------------EAVAATAKEVGIGKEY-INSSL---------TPQQK- 740 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~---------------~~a~~ia~~~gi~~~~-v~~~~---------~p~~K- 740 (883)
++.+++.++++.|++.|+++.++|+.+. ..+..+.+.+|+.... ++... .|+-+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~KP~~~~ 106 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGVLFCPHHPADNCSCRKPKPGL 106 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 3688999999999999999999998762 4566777888985222 22211 22211
Q ss_pred -HHHHHHHhhcCCeEEEEcCCccCHHHHHhCCee
Q 002770 741 -SEVISTLQTSGHHVAMVGDGINDAPSLALADVG 773 (883)
Q Consensus 741 -~~~v~~l~~~g~~v~~vGDg~ND~~al~~Advg 773 (883)
..+++.+.-..+.++||||...|+.+-+.+++-
T Consensus 107 ~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 107 ILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred HHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 223333333346799999999999999999874
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.004 Score=62.80 Aligned_cols=85 Identities=14% Similarity=0.154 Sum_probs=59.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEE-e----cCccch--HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINS-S----LTPQQK--SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~-~----~~p~~K--~~~v~~l~~~g~~v~~v 757 (883)
++.|++.++++.|+++|+++.++|+... +....+.+|+... .+.. . -.|+-. ....+.+.-....++||
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~v~v 164 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSECIGI 164 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 5679999999999999999999997533 4567888898521 2221 1 122211 22333333334679999
Q ss_pred cCCccCHHHHHhCCee
Q 002770 758 GDGINDAPSLALADVG 773 (883)
Q Consensus 758 GDg~ND~~al~~Advg 773 (883)
||..+|+.+-+.|++-
T Consensus 165 gD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 165 EDAQAGIEAIKAAGMF 180 (185)
T ss_pred ecCHHHHHHHHHcCCE
Confidence 9999999999999973
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.018 Score=66.07 Aligned_cols=152 Identities=17% Similarity=0.256 Sum_probs=117.6
Q ss_pred cCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC-------------------------
Q 002770 674 EGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK------------------------- 728 (883)
Q Consensus 674 ~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~------------------------- 728 (883)
.|..+.|++.+.-+.+++....|+.|-++-|+.+..|-.++...+-.|+++||..
T Consensus 813 sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q 892 (1354)
T KOG4383|consen 813 SGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQ 892 (1354)
T ss_pred ccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChh
Confidence 3556899999999999999999999999999999999999999999999999810
Q ss_pred ----------------------------------------------------------------------------ceEE
Q 002770 729 ----------------------------------------------------------------------------EYIN 732 (883)
Q Consensus 729 ----------------------------------------------------------------------------~~v~ 732 (883)
.-.|
T Consensus 893 ~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LF 972 (1354)
T KOG4383|consen 893 FAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLF 972 (1354)
T ss_pred hhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeec
Confidence 0246
Q ss_pred EecCccchHHHHHHHhhcCCeEEEEcCCccCHH--HHHhCCeeEEeecCC-------------ccHH-HHhhcC------
Q 002770 733 SSLTPQQKSEVISTLQTSGHHVAMVGDGINDAP--SLALADVGIALQIEA-------------QENA-ASTAAS------ 790 (883)
Q Consensus 733 ~~~~p~~K~~~v~~l~~~g~~v~~vGDg~ND~~--al~~AdvgIa~~~~~-------------~~~~-a~~~ad------ 790 (883)
..++|+.--+.|+.+|+.|+.++.+|...|-.. .+-+||++|++ .. ++.. ..++.|
T Consensus 973 TDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISial--D~l~~~~C~~e~fg~assismaqandglsplQ 1050 (1354)
T KOG4383|consen 973 TDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIAL--DDLEEPACRLEDFGVASSISMAQANDGLSPLQ 1050 (1354)
T ss_pred cCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEe--ccCCCccceecccccchhhhhhhhcCCCCcee
Confidence 678899999999999999999999999888644 34689999998 42 1111 111222
Q ss_pred -----------EEEeCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 002770 791 -----------IILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNV 827 (883)
Q Consensus 791 -----------~vl~~~~~~~l~~~i~~~r~~~~~i~~n~~~a~~~n~ 827 (883)
+-+....+-.+..+|+-+|..+.-+|+.+.|.+-..+
T Consensus 1051 iSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL 1098 (1354)
T KOG4383|consen 1051 ISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQL 1098 (1354)
T ss_pred ecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 2222223445778888999999999999988765443
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0056 Score=61.71 Aligned_cols=85 Identities=16% Similarity=0.186 Sum_probs=61.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEe-----cCccch--HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-----LTPQQK--SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~~K--~~~v~~l~~~g~~v~~v 757 (883)
++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+.. +.+++. ..|... ..+.+.+.-..+.++||
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~v~I 165 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPNECVVF 165 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHHHeEEE
Confidence 57899999999999999999999987 56788888889842 233321 123211 22233333334679999
Q ss_pred cCCccCHHHHHhCCee
Q 002770 758 GDGINDAPSLALADVG 773 (883)
Q Consensus 758 GDg~ND~~al~~Advg 773 (883)
||..+|+.+-+.|++.
T Consensus 166 gD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 166 EDALAGVQAARAAGMF 181 (185)
T ss_pred eCcHhhHHHHHHCCCe
Confidence 9999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.0086 Score=50.72 Aligned_cols=56 Identities=29% Similarity=0.425 Sum_probs=48.0
Q ss_pred EEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcC
Q 002770 76 LDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECG 143 (883)
Q Consensus 76 l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G 143 (883)
..--.|+|.+|...|++.++..+||.++.++...+++++.-+- ++..+.+.+.+.|
T Consensus 8 v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~------------~p~~vl~~l~k~~ 63 (73)
T KOG1603|consen 8 VLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNV------------DPVKLLKKLKKTG 63 (73)
T ss_pred EEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEec------------CHHHHHHHHHhcC
Confidence 3445799999999999999999999999999999999997652 5678888888766
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0093 Score=59.87 Aligned_cols=85 Identities=18% Similarity=0.200 Sum_probs=61.4
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEE-EecCccch------HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYIN-SSLTPQQK------SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K------~~~v~~l~~~g~~v~~v 757 (883)
++.|++.+.++.|++.|+++.++|+..... ..+..++|+.. +.++ +.-....| ..+.+.+.-....++||
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~v 163 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEECLFV 163 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcceEEEE
Confidence 468899999999999999999999988877 66666688842 1232 22111222 33334443345789999
Q ss_pred cCCccCHHHHHhCCe
Q 002770 758 GDGINDAPSLALADV 772 (883)
Q Consensus 758 GDg~ND~~al~~Adv 772 (883)
||...|+.+-+.+++
T Consensus 164 gD~~~di~aA~~~G~ 178 (183)
T TIGR01509 164 DDSPAGIEAAKAAGM 178 (183)
T ss_pred cCCHHHHHHHHHcCC
Confidence 999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.018 Score=60.12 Aligned_cols=38 Identities=29% Similarity=0.453 Sum_probs=32.4
Q ss_pred chHHHHHHHhhc----CCeEEEEcCCccCHHHHHhCCeeEEe
Q 002770 739 QKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 739 ~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~ 776 (883)
.|...++.+.+. .+.|+++||+.||.+||+.|+.|||+
T Consensus 179 ~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 179 SKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 587777776543 46799999999999999999999997
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.05 Score=57.90 Aligned_cols=66 Identities=18% Similarity=0.243 Sum_probs=43.6
Q ss_pred chHHHHHHHhhc----CCeEEEEcCCccCHHHHHhCCeeEEeecCCccHH-----HHhhc---C-EEEeCCChhhHHHHH
Q 002770 739 QKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENA-----ASTAA---S-IILLGNKLSQVVDAL 805 (883)
Q Consensus 739 ~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~-----a~~~a---d-~vl~~~~~~~l~~~i 805 (883)
.|...++.|+++ .+.|+.+||+.||.+||..++-||.+ +|+.+. ..... . ++-..+.-.+|.+.+
T Consensus 165 ~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV--~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 165 SKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVV--GNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE---TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEE--cCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 588888887765 24788899999999999999999999 777766 22222 2 333345566666655
Q ss_pred H
Q 002770 806 D 806 (883)
Q Consensus 806 ~ 806 (883)
+
T Consensus 243 ~ 243 (247)
T PF05116_consen 243 Q 243 (247)
T ss_dssp H
T ss_pred H
Confidence 4
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.028 Score=59.73 Aligned_cols=61 Identities=23% Similarity=0.307 Sum_probs=42.7
Q ss_pred chHHHHHHHhhc----CCeEEEEcCCccCHHHHHhC--------CeeEEeecCCccHHHHhhcCEEEeCCChhhHHHHH
Q 002770 739 QKSEVISTLQTS----GHHVAMVGDGINDAPSLALA--------DVGIALQIEAQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 739 ~K~~~v~~l~~~----g~~v~~vGDg~ND~~al~~A--------dvgIa~~~~~~~~~a~~~ad~vl~~~~~~~l~~~i 805 (883)
+|...++.+.+. ...++|+||+.||.+|++.+ ..+|++ ..+ ..+..|++++. +...+...+
T Consensus 167 ~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v--~~g--~~~~~A~~~~~--~~~~v~~~L 239 (244)
T TIGR00685 167 NKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI--GSG--SKKTVAKFHLT--GPQQVLEFL 239 (244)
T ss_pred CHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE--ecC--CcCCCceEeCC--CHHHHHHHH
Confidence 455555555443 34799999999999999988 478888 333 24567888874 466666555
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.019 Score=56.03 Aligned_cols=81 Identities=23% Similarity=0.302 Sum_probs=56.8
Q ss_pred ChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEecC--ccchHHHH----HHHhhcCCeEEEEcCC
Q 002770 689 RHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSSLT--PQQKSEVI----STLQTSGHHVAMVGDG 760 (883)
Q Consensus 689 r~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~~~--p~~K~~~v----~~l~~~g~~v~~vGDg 760 (883)
.+++.+.++.|++.|+++.++|+.....+....+.. +.. +.+++.-. ++.+.+.+ +.+.-.. .++||||.
T Consensus 66 ~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~~~~Kp~~~~~~~~~~~~~~~~-~~l~iGDs 143 (154)
T TIGR01549 66 IRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDEFGAKPEPEIFLAALESLGLPP-EVLHVGDN 143 (154)
T ss_pred ccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCCCCCCcCHHHHHHHHHHcCCCC-CEEEEeCC
Confidence 478999999999999999999999999988888874 321 12332211 11122333 3333334 79999999
Q ss_pred ccCHHHHHhCC
Q 002770 761 INDAPSLALAD 771 (883)
Q Consensus 761 ~ND~~al~~Ad 771 (883)
.+|..+-+.|+
T Consensus 144 ~~Di~aa~~aG 154 (154)
T TIGR01549 144 LNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHHcc
Confidence 99999988774
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.02 Score=59.74 Aligned_cols=87 Identities=17% Similarity=0.184 Sum_probs=57.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHH-HHHHcCCCC--ceEEEec-------Cccc--hHHHHHHHh---hcC
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAA-TAKEVGIGK--EYINSSL-------TPQQ--KSEVISTLQ---TSG 751 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~-ia~~~gi~~--~~v~~~~-------~p~~--K~~~v~~l~---~~g 751 (883)
++.|++.+.|+.|++.|+++.++||-....... ..+..++.. +.+++.- .|+. =...++.+. -..
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~ 157 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDP 157 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCc
Confidence 467999999999999999999999987654432 332234421 1222221 1211 133444443 234
Q ss_pred CeEEEEcCCccCHHHHHhCCee
Q 002770 752 HHVAMVGDGINDAPSLALADVG 773 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~Advg 773 (883)
+.++||||...|+.+-+.|++-
T Consensus 158 ~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 158 GKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred cceEEEeccHhhHHHHHHCCCe
Confidence 6799999999999999999973
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.014 Score=57.72 Aligned_cols=88 Identities=10% Similarity=0.114 Sum_probs=61.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCC---------------cHHHHHHHHHHcCCCCceE-EE-----ecCc--cchHHH
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGD---------------REEAVAATAKEVGIGKEYI-NS-----SLTP--QQKSEV 743 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd---------------~~~~a~~ia~~~gi~~~~v-~~-----~~~p--~~K~~~ 743 (883)
++-+++.+++++|+++|++++++|.. ....+..+.+.+|+.-+.+ ++ .-.. .-|..+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd~ii~~~~~~~~~~~~~KP~~~~ 108 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFDDVLICPHFPDDNCDCRKPKIKL 108 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCceeEEEECCCCCCCCCCCCCCCHHH
Confidence 35688999999999999999999975 3456778888889862223 22 1111 112333
Q ss_pred HHHHhh----cCCeEEEEcCCccCHHHHHhCCeeE
Q 002770 744 ISTLQT----SGHHVAMVGDGINDAPSLALADVGI 774 (883)
Q Consensus 744 v~~l~~----~g~~v~~vGDg~ND~~al~~AdvgI 774 (883)
+..+.+ ....+.||||+.+|..+.+.+++-.
T Consensus 109 ~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 109 LEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred HHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 333322 2357999999999999999999743
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.032 Score=59.58 Aligned_cols=83 Identities=18% Similarity=0.170 Sum_probs=62.0
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHcCCCC---ceEEEecCccchHHHHHHHhhcCCeEEEEcC
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEA---VAATAKEVGIGK---EYINSSLTPQQKSEVISTLQTSGHHVAMVGD 759 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~---a~~ia~~~gi~~---~~v~~~~~p~~K~~~v~~l~~~g~~v~~vGD 759 (883)
.++-|++.+.++.|++.|+++.++|++.... +....+..|++. +.++.+-....|....+.+.+....+++|||
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~~~~~K~~rr~~I~~~y~Ivl~vGD 196 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKKDKSSKESRRQKVQKDYEIVLLFGD 196 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCCCCCCcHHHHHHHHhcCCEEEEECC
Confidence 3457899999999999999999999987443 446667789853 3555553334576666667665567999999
Q ss_pred CccCHHHHH
Q 002770 760 GINDAPSLA 768 (883)
Q Consensus 760 g~ND~~al~ 768 (883)
-.+|.....
T Consensus 197 ~~~Df~~~~ 205 (266)
T TIGR01533 197 NLLDFDDFF 205 (266)
T ss_pred CHHHhhhhh
Confidence 999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.034 Score=58.15 Aligned_cols=88 Identities=22% Similarity=0.320 Sum_probs=66.5
Q ss_pred CCChhHHHHHHHH--HHCCCEEEEEcCCcHHHHHHHHHHcCCCCc--eEEEe----------------------cCc-cc
Q 002770 687 SLRHDAEHTVRSL--QQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINSS----------------------LTP-QQ 739 (883)
Q Consensus 687 ~lr~~~~~~i~~L--~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~--~v~~~----------------------~~p-~~ 739 (883)
|+.|+.++.++.+ ++.|+.++++|.-+..-...+.+.-|+... .++++ +.| --
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~NmC 150 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPPNMC 150 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCCccc
Confidence 5678889999999 568999999999999999999999999532 22221 222 25
Q ss_pred hHHHHHHHhhc----C---CeEEEEcCCccCHHHH---HhCCeeE
Q 002770 740 KSEVISTLQTS----G---HHVAMVGDGINDAPSL---ALADVGI 774 (883)
Q Consensus 740 K~~~v~~l~~~----g---~~v~~vGDg~ND~~al---~~AdvgI 774 (883)
|..+++.+++. | .+|++||||.||.... +.+|+-.
T Consensus 151 K~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 151 KGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred hHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 99999988775 4 6899999999996543 2455443
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.0098 Score=57.97 Aligned_cols=91 Identities=9% Similarity=-0.026 Sum_probs=65.9
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC---ceEEEe-cCccchHHHHHHH---hhcCCeEEEE
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK---EYINSS-LTPQQKSEVISTL---QTSGHHVAMV 757 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~---~~v~~~-~~p~~K~~~v~~l---~~~g~~v~~v 757 (883)
.-.++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+.. +.+.++ -....|-.+.+.+ ....+.++||
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~~~KP~~~k~l~~l~~~p~~~i~i 121 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECVFVKGKYVKDLSLLGRDLSNVIII 121 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccccccCCeEeecHHHcCCChhcEEEE
Confidence 3356999999999998 579999999999999999999999853 122222 1111232244433 3445789999
Q ss_pred cCCccCHHHHHhCCeeEEe
Q 002770 758 GDGINDAPSLALADVGIAL 776 (883)
Q Consensus 758 GDg~ND~~al~~AdvgIa~ 776 (883)
||..+|..+-+.+++-|..
T Consensus 122 ~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 122 DDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred ECCHHHhhcCccCEEEecC
Confidence 9999999987777666543
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.025 Score=62.88 Aligned_cols=87 Identities=11% Similarity=0.142 Sum_probs=62.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCC---------------cHHHHHHHHHHcCCCCceEEEec--------CccchHHH
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGD---------------REEAVAATAKEVGIGKEYINSSL--------TPQQKSEV 743 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd---------------~~~~a~~ia~~~gi~~~~v~~~~--------~p~~K~~~ 743 (883)
++.|++.+.+++|+++|++++++|+- ....+..+.+..|+.-+.++... ...-|..+
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd~i~i~~~~~sd~~~~rKP~p~~ 109 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFDEVLICPHFPEDNCSCRKPKTGL 109 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCceeeEEEeCCcCcccCCCCCCCHHH
Confidence 56899999999999999999999983 24456678888888522332211 11223444
Q ss_pred HHHHhhc----CCeEEEEcCCccCHHHHHhCCee
Q 002770 744 ISTLQTS----GHHVAMVGDGINDAPSLALADVG 773 (883)
Q Consensus 744 v~~l~~~----g~~v~~vGDg~ND~~al~~Advg 773 (883)
+..+.++ ...+.||||+.+|..+-+.|++-
T Consensus 110 l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 110 VEEYLAEGAIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred HHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 5444332 37899999999999999999974
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.047 Score=56.76 Aligned_cols=80 Identities=24% Similarity=0.224 Sum_probs=59.0
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHcCCCC-ceEEEec-Cccc------hHHHHHHHhhcCC-e
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEA---VAATAKEVGIGK-EYINSSL-TPQQ------KSEVISTLQTSGH-H 753 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~---a~~ia~~~gi~~-~~v~~~~-~p~~------K~~~v~~l~~~g~-~ 753 (883)
-+.-|++.+.++.|++.|++|+++||+.... ...-.++.|++. +.++-+- .... |.+.-+.+.++|+ .
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~~~~~~~yKs~~R~~l~~~GYrI 198 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDSNKTVVTYKSEVRKSLMEEGYRI 198 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCCCchHhHHHHHHHHHHHhCCceE
Confidence 3667899999999999999999999999766 444456678873 4455443 1122 6666667777776 5
Q ss_pred EEEEcCCccCHH
Q 002770 754 VAMVGDGINDAP 765 (883)
Q Consensus 754 v~~vGDg~ND~~ 765 (883)
++.+||..+|..
T Consensus 199 v~~iGDq~sDl~ 210 (229)
T TIGR01675 199 WGNIGDQWSDLL 210 (229)
T ss_pred EEEECCChHHhc
Confidence 678999999873
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.065 Score=56.81 Aligned_cols=93 Identities=15% Similarity=0.191 Sum_probs=63.2
Q ss_pred EEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHH--HHHHHcCCCCceEEEecCccc-hHHHHHHH-hh---cCC
Q 002770 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVA--ATAKEVGIGKEYINSSLTPQQ-KSEVISTL-QT---SGH 752 (883)
Q Consensus 680 G~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~--~ia~~~gi~~~~v~~~~~p~~-K~~~v~~l-~~---~g~ 752 (883)
|.+.-.+.+-|++.+++++|+++|+++.++|........ ...+++|+..+.+..-+++.+ -...+... ++ .+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~~~~l~~~~~~~~~~~~ 96 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSGEIAVQMILESKKRFDIRNG 96 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccHHHHHHHHHhhhhhccCCCc
Confidence 445566788999999999999999999999986655444 567889997411111122332 12233322 22 246
Q ss_pred eEEEEcCCccCHHHHHhCCe
Q 002770 753 HVAMVGDGINDAPSLALADV 772 (883)
Q Consensus 753 ~v~~vGDg~ND~~al~~Adv 772 (883)
.+.++||+.+|...+...+.
T Consensus 97 ~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 97 IIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred eEEEeCCcccchhhhcCCCc
Confidence 79999999999998865543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.019 Score=58.98 Aligned_cols=86 Identities=16% Similarity=0.251 Sum_probs=59.9
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEE-ec----Cccc--hHHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINS-SL----TPQQ--KSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~-~~----~p~~--K~~~v~~l~~~g~~v~~v 757 (883)
.+-|++.++++.|++.|+++.++|+-... .....+.+|+.. +.++. .- .|+. =..+++.+.-....++||
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~~~~I 183 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHI 183 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhHEEEE
Confidence 46789999999999999999999976654 467778888842 12322 11 2221 122333333345789999
Q ss_pred cCCc-cCHHHHHhCCee
Q 002770 758 GDGI-NDAPSLALADVG 773 (883)
Q Consensus 758 GDg~-ND~~al~~Advg 773 (883)
||+. +|+.+-+.|++-
T Consensus 184 gD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 184 GDSLRNDYQGARAAGWR 200 (203)
T ss_pred CCCchHHHHHHHHcCCe
Confidence 9997 899999988863
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.041 Score=60.96 Aligned_cols=90 Identities=13% Similarity=0.214 Sum_probs=71.1
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH----cCCCCceEEEecCccchHHHHHHHhh----cCCeEEEEc
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKE----VGIGKEYINSSLTPQQKSEVISTLQT----SGHHVAMVG 758 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~----~gi~~~~v~~~~~p~~K~~~v~~l~~----~g~~v~~vG 758 (883)
++.+++.++++.|++.|+++.++|..+...+..+.+. +|+.+........++.|...++.+.+ ....++|||
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~~~pk~~~i~~~~~~l~i~~~~~vfid 110 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSINWGPKSESLRKIAKKLNLGTDSFLFID 110 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEecCchHHHHHHHHHHhCCCcCcEEEEC
Confidence 3578999999999999999999999999999999999 88864333333444556555554433 347899999
Q ss_pred CCccCHHHHHhCCeeEEe
Q 002770 759 DGINDAPSLALADVGIAL 776 (883)
Q Consensus 759 Dg~ND~~al~~AdvgIa~ 776 (883)
|...|..+.+.+...+.+
T Consensus 111 D~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 111 DNPAERANVKITLPVKTL 128 (320)
T ss_pred CCHHHHHHHHHHCCCCcc
Confidence 999999999998887655
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.039 Score=54.83 Aligned_cols=87 Identities=13% Similarity=0.171 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHH------------HHHHHHHHcCCCCceEEEec-----Cccch--HHHHHHHh
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREE------------AVAATAKEVGIGKEYINSSL-----TPQQK--SEVISTLQ 748 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~------------~a~~ia~~~gi~~~~v~~~~-----~p~~K--~~~v~~l~ 748 (883)
+-+++.+++++|+++|+++.++|..+.. .+..+.+.+|+....+.+.- .|+.. ..+++.+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~~~ii~~~~~~~~KP~p~~~~~~~~~~~ 122 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPIQVLAATHAGLYRKPMTGMWEYLQSQYN 122 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCccHHHHHHHHHcC
Confidence 3489999999999999999999976542 45678899998642222211 12111 22233332
Q ss_pred --hcCCeEEEEcCCc--------cCHHHHHhCCeeE
Q 002770 749 --TSGHHVAMVGDGI--------NDAPSLALADVGI 774 (883)
Q Consensus 749 --~~g~~v~~vGDg~--------ND~~al~~AdvgI 774 (883)
-....++||||.. +|..+-+.|++-.
T Consensus 123 ~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 123 SPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 2236799999986 6999999888643
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.044 Score=51.93 Aligned_cols=83 Identities=12% Similarity=0.150 Sum_probs=58.6
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCC-cHHHHHHHHHHcC-------CCC---ceEEEecCccch--HHHHHHHh--hcC
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGD-REEAVAATAKEVG-------IGK---EYINSSLTPQQK--SEVISTLQ--TSG 751 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd-~~~~a~~ia~~~g-------i~~---~~v~~~~~p~~K--~~~v~~l~--~~g 751 (883)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..| +.. ..+.+.-.|+.+ ...++.+. -..
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~~~pkp~~~~~a~~~lg~~~~p 108 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGYWLPKSPRLVEIALKLNGVLKP 108 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcCCCcHHHHHHHHHHHhcCCCCc
Confidence 67899999999999999999999999 7888878778777 321 112221233322 23334444 344
Q ss_pred CeEEEEcCCccCHHHHHh
Q 002770 752 HHVAMVGDGINDAPSLAL 769 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~ 769 (883)
+.++||||...|...++.
T Consensus 109 ~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 109 KSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ceEEEECCCHhHHHHHHh
Confidence 789999999999877653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.20 E-value=0.12 Score=57.86 Aligned_cols=67 Identities=22% Similarity=0.313 Sum_probs=46.2
Q ss_pred ecCcc---chHHHHHHHhhc-C---C---eEEEEcCCccCHHHHHh-----CCeeEEeecCCccHHHHhhcCEEEeCCCh
Q 002770 734 SLTPQ---QKSEVISTLQTS-G---H---HVAMVGDGINDAPSLAL-----ADVGIALQIEAQENAASTAASIILLGNKL 798 (883)
Q Consensus 734 ~~~p~---~K~~~v~~l~~~-g---~---~v~~vGDg~ND~~al~~-----AdvgIa~~~~~~~~~a~~~ad~vl~~~~~ 798 (883)
++.|. +|...++.+.+. | . .++++||+.||..|++. +++||+| +++... -.|++.+. +.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~V--gn~~~~--t~A~y~L~--dp 366 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILV--SSVPKE--SNAFYSLR--DP 366 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEE--ecCCCC--ccceEEcC--CH
Confidence 34553 788888777654 2 1 25899999999999996 6899999 554432 25777774 46
Q ss_pred hhHHHHHH
Q 002770 799 SQVVDALD 806 (883)
Q Consensus 799 ~~l~~~i~ 806 (883)
..+..+++
T Consensus 367 ~eV~~~L~ 374 (384)
T PLN02580 367 SEVMEFLK 374 (384)
T ss_pred HHHHHHHH
Confidence 66665554
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.083 Score=52.25 Aligned_cols=105 Identities=14% Similarity=0.218 Sum_probs=80.0
Q ss_pred CCCCCeEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCC--EEEEEcCC-------cHHHHHHHHHHcCCCCceE-
Q 002770 662 SNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGI--KTLLLSGD-------REEAVAATAKEVGIGKEYI- 731 (883)
Q Consensus 662 ~~~g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi--~v~~lTGd-------~~~~a~~ia~~~gi~~~~v- 731 (883)
.+.|.+.+.+-.||- + ..--++++.++..+.+++|++.+. +++++|.. +...|..+.+.+||+ .+
T Consensus 37 k~~Gik~li~DkDNT-L--~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--vl~ 111 (168)
T PF09419_consen 37 KKKGIKALIFDKDNT-L--TPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--VLR 111 (168)
T ss_pred hhcCceEEEEcCCCC-C--CCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc--EEE
Confidence 456677777776765 2 123478889999999999999976 59999976 488999999999996 33
Q ss_pred EEecCccchHHHHHHHhhc-----CCeEEEEcCC-ccCHHHHHhCC
Q 002770 732 NSSLTPQQKSEVISTLQTS-----GHHVAMVGDG-INDAPSLALAD 771 (883)
Q Consensus 732 ~~~~~p~~K~~~v~~l~~~-----g~~v~~vGDg-~ND~~al~~Ad 771 (883)
+..-.|....++.+.++.+ .+.++||||- ..|+-+-...+
T Consensus 112 h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 112 HRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred eCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 4456887777888888765 6789999997 56776655555
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.066 Score=55.75 Aligned_cols=90 Identities=13% Similarity=0.130 Sum_probs=63.7
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc---CCCC--ceEEE-e--cCccc--hHHHHHHHhhcCCeE
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEV---GIGK--EYINS-S--LTPQQ--KSEVISTLQTSGHHV 754 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~---gi~~--~~v~~-~--~~p~~--K~~~v~~l~~~g~~v 754 (883)
+-++.+++.+++++|+++|+++.++|..+......+-+.. ++.. +.++. . ..|+. =..+++.+.-..+.+
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~~~g~KP~p~~y~~i~~~lgv~p~e~ 172 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDTTVGLKTEAQSYVKIAGQLGSPPREI 172 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEeCcccCCCHHHHHHHHHHhCcChhHE
Confidence 4468899999999999999999999998888777776664 3311 11221 1 12221 134445554445789
Q ss_pred EEEcCCccCHHHHHhCCeeE
Q 002770 755 AMVGDGINDAPSLALADVGI 774 (883)
Q Consensus 755 ~~vGDg~ND~~al~~AdvgI 774 (883)
+||||...|+.+-+.|++-.
T Consensus 173 lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 173 LFLSDIINELDAARKAGLHT 192 (220)
T ss_pred EEEeCCHHHHHHHHHcCCEE
Confidence 99999999999999999754
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=94.79 E-value=0.12 Score=66.11 Aligned_cols=112 Identities=18% Similarity=0.200 Sum_probs=77.9
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC---ceEEEe-----cCccc--hHHHHHHHhhcCCeEEEE
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK---EYINSS-----LTPQQ--KSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~---~~v~~~-----~~p~~--K~~~v~~l~~~g~~v~~v 757 (883)
+-|++.+.+++|+++|+++.++|+-....+....+.+|+.. +.+++. ..|+. =...++.+.-..+.++||
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v~I 241 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI 241 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEEEE
Confidence 56899999999999999999999999999999999999851 223221 12221 134445554456789999
Q ss_pred cCCccCHHHHHhCCe-eEEeecC-CccHHHHhhcCEEEeCCChhhH
Q 002770 758 GDGINDAPSLALADV-GIALQIE-AQENAASTAASIILLGNKLSQV 801 (883)
Q Consensus 758 GDg~ND~~al~~Adv-gIa~~~~-~~~~~a~~~ad~vl~~~~~~~l 801 (883)
||..+|+.+-+.|++ .|++..+ ...+.....+|+++.+ +..+
T Consensus 242 gDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~--l~el 285 (1057)
T PLN02919 242 EDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKD--IGNI 285 (1057)
T ss_pred cCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECC--hHHC
Confidence 999999999999997 4444222 2222334567777743 5443
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.11 Score=52.58 Aligned_cols=90 Identities=23% Similarity=0.335 Sum_probs=65.5
Q ss_pred CCChhHHHHHHHHHHCCC-EEEEEcCCcHHHHHHHHHHcCCCCc------------------------eEEEecCcc--c
Q 002770 687 SLRHDAEHTVRSLQQKGI-KTLLLSGDREEAVAATAKEVGIGKE------------------------YINSSLTPQ--Q 739 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi-~v~~lTGd~~~~a~~ia~~~gi~~~------------------------~v~~~~~p~--~ 739 (883)
|+-|+..++|+.+++.|- .++++|--|.-....+.+..||..- ..-|++.|. -
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~CPsNmC 163 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNLCPSNMC 163 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCcCchhhh
Confidence 668899999999999996 8999999999999999999998210 012333444 3
Q ss_pred hHHHHHHHhhcC-------CeEEEEcCCccCH-HHHHhCCeeEEe
Q 002770 740 KSEVISTLQTSG-------HHVAMVGDGINDA-PSLALADVGIAL 776 (883)
Q Consensus 740 K~~~v~~l~~~g-------~~v~~vGDg~ND~-~al~~AdvgIa~ 776 (883)
|..++..++..+ +++.++|||.||. |+++...--+||
T Consensus 164 Kg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~am 208 (256)
T KOG3120|consen 164 KGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAM 208 (256)
T ss_pred hhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceec
Confidence 777777765532 3899999999994 555544444444
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.23 Score=52.78 Aligned_cols=47 Identities=17% Similarity=0.275 Sum_probs=40.7
Q ss_pred EEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH---cCC
Q 002770 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKE---VGI 726 (883)
Q Consensus 680 G~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~---~gi 726 (883)
|++.-.+.+-|++.++++.|+++|++++++|++...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 56677788899999999999999999999999998887777766 466
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.41 E-value=0.11 Score=53.09 Aligned_cols=88 Identities=15% Similarity=0.196 Sum_probs=59.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCC--ceEE-Eec----Cccc--hHHHHHHHhhcCCeEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKE-VGIGK--EYIN-SSL----TPQQ--KSEVISTLQTSGHHVAM 756 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~-~gi~~--~~v~-~~~----~p~~--K~~~v~~l~~~g~~v~~ 756 (883)
++.|++.++++.|++.|+++.++|.-+.......... .++.. +.++ +.- .|+- =..+++.+.-....++|
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~~l~ 163 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAADAVF 163 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhHeEE
Confidence 3689999999999999999999998876655443322 23321 1222 221 2221 13334444444578999
Q ss_pred EcCCccCHHHHHhCCeeE
Q 002770 757 VGDGINDAPSLALADVGI 774 (883)
Q Consensus 757 vGDg~ND~~al~~AdvgI 774 (883)
|||...|+.+-+.+++-.
T Consensus 164 vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 164 FDDNADNIEAANALGITS 181 (199)
T ss_pred eCCCHHHHHHHHHcCCEE
Confidence 999999999999999843
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.31 Score=52.22 Aligned_cols=47 Identities=19% Similarity=0.393 Sum_probs=36.8
Q ss_pred EEEEecCC----CChhHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHcCC
Q 002770 680 GAIAISDS----LRHDAEHTVRSLQQKGIKTLLLSGDREEA---VAATAKEVGI 726 (883)
Q Consensus 680 G~i~l~D~----lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~---a~~ia~~~gi 726 (883)
|++.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~ 63 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGF 63 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCC
Confidence 55566666 88899999999999999999999876664 4444555676
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.054 Score=55.97 Aligned_cols=90 Identities=16% Similarity=0.200 Sum_probs=58.5
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHH--HHHHHHHcCCCC--ceEEEe-----cCccch--HHHHHHHhhcCCeEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEA--VAATAKEVGIGK--EYINSS-----LTPQQK--SEVISTLQTSGHHVA 755 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~--a~~ia~~~gi~~--~~v~~~-----~~p~~K--~~~v~~l~~~g~~v~ 755 (883)
++.|++.+.++.|+++|+++.++|...... ........++.. +.++.. ..|+.. ..+++.+.-....++
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~~l 173 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEECV 173 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHHeE
Confidence 568999999999999999999999865432 222223344421 133322 123321 233344443456799
Q ss_pred EEcCCccCHHHHHhCCe-eEEe
Q 002770 756 MVGDGINDAPSLALADV-GIAL 776 (883)
Q Consensus 756 ~vGDg~ND~~al~~Adv-gIa~ 776 (883)
||||...|+.+-+.|++ .|.+
T Consensus 174 ~i~D~~~di~aA~~aG~~~i~v 195 (211)
T TIGR02247 174 FLDDLGSNLKPAAALGITTIKV 195 (211)
T ss_pred EEcCCHHHHHHHHHcCCEEEEE
Confidence 99999999999999997 4444
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.11 Score=57.20 Aligned_cols=101 Identities=18% Similarity=0.181 Sum_probs=64.3
Q ss_pred eEEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH---HHcCCCC--ceEEEecCccchH
Q 002770 667 SVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATA---KEVGIGK--EYINSSLTPQQKS 741 (883)
Q Consensus 667 ~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia---~~~gi~~--~~v~~~~~p~~K~ 741 (883)
..+++-.+| ++.-.+.+-+++.++|++|+++|++++++|++...+...++ +.+|+.. +.++.... ...
T Consensus 29 ~~~~~D~DG-----tl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts~~--~~~ 101 (311)
T PLN02645 29 ETFIFDCDG-----VIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSSSF--AAA 101 (311)
T ss_pred CEEEEeCcC-----CeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeehHH--HHH
Confidence 344554444 45556777899999999999999999999999966666655 5678742 23332211 112
Q ss_pred HHHHHHhh-cCCeEEEEcCCccCHHHHHhCCeeEE
Q 002770 742 EVISTLQT-SGHHVAMVGDGINDAPSLALADVGIA 775 (883)
Q Consensus 742 ~~v~~l~~-~g~~v~~vGDg~ND~~al~~AdvgIa 775 (883)
..++.... .+.. +++++...|...++.+++=+.
T Consensus 102 ~~l~~~~~~~~~~-V~viG~~~~~~~l~~~Gi~~~ 135 (311)
T PLN02645 102 AYLKSINFPKDKK-VYVIGEEGILEELELAGFQYL 135 (311)
T ss_pred HHHHhhccCCCCE-EEEEcCHHHHHHHHHCCCEEe
Confidence 22222211 1234 566666789999998887543
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.56 Score=52.27 Aligned_cols=57 Identities=18% Similarity=0.251 Sum_probs=43.9
Q ss_pred CCCCeEEEEEecCceEEEEEEecC--CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH
Q 002770 663 NYSKSVVYVGREGEGIIGAIAISD--SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATA 721 (883)
Q Consensus 663 ~~g~~~~~~a~~~~~~lG~i~l~D--~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia 721 (883)
.....++++-+||. ++-+..-.| .+.++..++|++|+ .|++++++||+.......+.
T Consensus 108 ~~k~~llflD~DGT-L~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 108 RGKQIVMFLDYDGT-LSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred cCCCeEEEEecCCc-CcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 34456777778887 665544333 48899999999999 78999999999988887664
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=93.69 E-value=0.23 Score=49.99 Aligned_cols=85 Identities=7% Similarity=0.114 Sum_probs=62.3
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEec---------Cccch--HHHHHHHhhcCCe
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSSL---------TPQQK--SEVISTLQTSGHH 753 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~~---------~p~~K--~~~v~~l~~~g~~ 753 (883)
++.+++.+++++|+ .+++++|+-+...+....+.+|+.. +.+++.- .|+.. ..+++.+......
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 160 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVDPER 160 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCCccc
Confidence 36789999999998 4789999999999999999999852 2333321 33221 3444445445678
Q ss_pred EEEEcCCccCHHHHHhCCeeE
Q 002770 754 VAMVGDGINDAPSLALADVGI 774 (883)
Q Consensus 754 v~~vGDg~ND~~al~~AdvgI 774 (883)
++||||...|+.+-+.+++-.
T Consensus 161 ~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 161 AIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred eEEEeCCHHHHHHHHHcCCEE
Confidence 999999999999999998743
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.51 E-value=0.15 Score=53.10 Aligned_cols=87 Identities=13% Similarity=0.071 Sum_probs=61.8
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc---eEEEe-cCccch------HHHHHHHhhcCCeEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE---YINSS-LTPQQK------SEVISTLQTSGHHVAM 756 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~---~v~~~-~~p~~K------~~~v~~l~~~g~~v~~ 756 (883)
++.+++.++++.| ++++.++|+.....+...-+..|+... .+++. -....| ....+.+.-..+.++|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~ 164 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENCIL 164 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 4567899999988 489999999998888888888898521 23222 111122 3333334334467999
Q ss_pred EcCCccCHHHHHhCCeeEEe
Q 002770 757 VGDGINDAPSLALADVGIAL 776 (883)
Q Consensus 757 vGDg~ND~~al~~AdvgIa~ 776 (883)
|||..+|+.+-+.|++....
T Consensus 165 igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 165 VDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred EeCcHhhHHHHHHCCCEEEE
Confidence 99999999999999987653
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.39 Score=48.66 Aligned_cols=54 Identities=15% Similarity=0.340 Sum_probs=40.7
Q ss_pred EEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCC
Q 002770 668 VVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI 726 (883)
Q Consensus 668 ~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi 726 (883)
+++...|+. +++ =+.+ -..+.+.+.+|+++|++|+.+|.........+-+.+|+
T Consensus 9 lIFtDlD~T-Ll~-~~ye---~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v 62 (274)
T COG3769 9 LIFTDLDGT-LLP-HSYE---WQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGV 62 (274)
T ss_pred EEEEcccCc-ccC-CCCC---CCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCC
Confidence 455555554 544 1111 23467899999999999999999999999999999997
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.12 Score=46.80 Aligned_cols=87 Identities=20% Similarity=0.265 Sum_probs=55.2
Q ss_pred EEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH---HHcCCC--CceEEEecCccchHHHHHHHhh--cCC
Q 002770 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATA---KEVGIG--KEYINSSLTPQQKSEVISTLQT--SGH 752 (883)
Q Consensus 680 G~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia---~~~gi~--~~~v~~~~~p~~K~~~v~~l~~--~g~ 752 (883)
|++...+++-|++.++|+.|+++|++++++|.....+...++ +.+|++ .+.++... ....+.|++ .+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~-----~~~~~~l~~~~~~~ 81 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSG-----MAAAEYLKEHKGGK 81 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHH-----HHHHHHHHHHTTSS
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChH-----HHHHHHHHhcCCCC
Confidence 445567888999999999999999999999987655444443 667885 12233211 123344444 477
Q ss_pred eEEEEcCCccCHHHHHhCCe
Q 002770 753 HVAMVGDGINDAPSLALADV 772 (883)
Q Consensus 753 ~v~~vGDg~ND~~al~~Adv 772 (883)
+|..+|.. .....++.+++
T Consensus 82 ~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 82 KVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEEES-H-HHHHHHHHTTE
T ss_pred EEEEEcCH-HHHHHHHHcCC
Confidence 89999975 55666666553
|
... |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.71 Score=57.64 Aligned_cols=58 Identities=12% Similarity=0.226 Sum_probs=43.4
Q ss_pred CCeEEEEEecCceEEEEEEecCCCChhHHHHHHHH-HHCCCEEEEEcCCcHHHHHHHHHH
Q 002770 665 SKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSL-QQKGIKTLLLSGDREEAVAATAKE 723 (883)
Q Consensus 665 g~~~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L-~~~Gi~v~~lTGd~~~~a~~ia~~ 723 (883)
..+.+++-+||. ++-.-...-.+.++..+++++| ++.|..++++||+........-..
T Consensus 595 ~~rlI~LDyDGT-Llp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 595 TTRAILLDYDGT-LMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred cCeEEEEecCCc-ccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 457778888886 5422222335678999999998 778999999999999888766644
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.83 Score=48.63 Aligned_cols=47 Identities=26% Similarity=0.321 Sum_probs=38.9
Q ss_pred EEEEecCCCChhHHHHHHHHHHCCCEEEEEcC---CcHHHHHHHHHHcCC
Q 002770 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSG---DREEAVAATAKEVGI 726 (883)
Q Consensus 680 G~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTG---d~~~~a~~ia~~~gi 726 (883)
|++.-.+.+-+++.++|++|+++|++++++|| +.........+++|+
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~ 59 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDI 59 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 44555677778999999999999999999996 677777777777887
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=92.61 E-value=0.14 Score=53.69 Aligned_cols=78 Identities=19% Similarity=0.272 Sum_probs=57.2
Q ss_pred ChhHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHcCCCC-ceEEEecCc--c------chHHHHHHHhhcCC-eEE
Q 002770 689 RHDAEHTVRSLQQKGIKTLLLSGDREEA---VAATAKEVGIGK-EYINSSLTP--Q------QKSEVISTLQTSGH-HVA 755 (883)
Q Consensus 689 r~~~~~~i~~L~~~Gi~v~~lTGd~~~~---a~~ia~~~gi~~-~~v~~~~~p--~------~K~~~v~~l~~~g~-~v~ 755 (883)
-|++.+.++.+++.|++|+++||++... ...=.++.|+.. +.++.+... . -|...-+.+++.|+ .++
T Consensus 117 ip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~ 196 (229)
T PF03767_consen 117 IPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSKKSAVEYKSERRKEIEKKGYRIIA 196 (229)
T ss_dssp ETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS------SHHHHHHHHHTTEEEEE
T ss_pred cHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhccccccccccccccccchHHHHHHHHcCCcEEE
Confidence 4678999999999999999999987663 333456678854 344433222 2 38888888988865 678
Q ss_pred EEcCCccCHHH
Q 002770 756 MVGDGINDAPS 766 (883)
Q Consensus 756 ~vGDg~ND~~a 766 (883)
++||..+|...
T Consensus 197 ~iGD~~~D~~~ 207 (229)
T PF03767_consen 197 NIGDQLSDFSG 207 (229)
T ss_dssp EEESSGGGCHC
T ss_pred EeCCCHHHhhc
Confidence 99999999775
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.22 Score=50.18 Aligned_cols=81 Identities=9% Similarity=0.092 Sum_probs=58.3
Q ss_pred HHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEEEe-c----Cccc--hHHHHHHHhhcCCeEEEEcCCcc
Q 002770 692 AEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-L----TPQQ--KSEVISTLQTSGHHVAMVGDGIN 762 (883)
Q Consensus 692 ~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~~~-~----~p~~--K~~~v~~l~~~g~~v~~vGDg~N 762 (883)
..+.++.|++. ++..++|+.....+....+..|+.. +.+.+. - .|+. =....+.++-....++||||..+
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~igDs~~ 170 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADF 170 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEEEeccHh
Confidence 35889999865 8999999999999999999999852 122221 1 1211 13334444434567999999999
Q ss_pred CHHHHHhCCee
Q 002770 763 DAPSLALADVG 773 (883)
Q Consensus 763 D~~al~~Advg 773 (883)
|+.+-+.|++-
T Consensus 171 di~aA~~aG~~ 181 (188)
T PRK10725 171 GIQAARAAGMD 181 (188)
T ss_pred hHHHHHHCCCE
Confidence 99999999973
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.28 Score=50.00 Aligned_cols=87 Identities=13% Similarity=0.129 Sum_probs=55.5
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC------ceE-EEecCccchHHHHHH-HhhcC-CeEEEEc
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK------EYI-NSSLTPQQKSEVIST-LQTSG-HHVAMVG 758 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~------~~v-~~~~~p~~K~~~v~~-l~~~g-~~v~~vG 758 (883)
+.|++.+++++|++.+ +.+++|.-+........+.+|+.. +.+ .++... .|-+++.. +++.| +.++|||
T Consensus 75 ~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~~-~kp~~~~~a~~~~~~~~~v~vg 152 (197)
T PHA02597 75 AYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHDE-SKEKLFIKAKEKYGDRVVCFVD 152 (197)
T ss_pred CCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccCc-ccHHHHHHHHHHhCCCcEEEeC
Confidence 5789999999999875 566777655555554556666631 112 222221 24444333 22233 4688999
Q ss_pred CCccCHHHHHhC--Ce-eEEe
Q 002770 759 DGINDAPSLALA--DV-GIAL 776 (883)
Q Consensus 759 Dg~ND~~al~~A--dv-gIa~ 776 (883)
|..+|+.+-++| |+ .|.+
T Consensus 153 Ds~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 153 DLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred CCHHHHHHHHHHHcCCcEEEe
Confidence 999999999999 97 3444
|
2 hypothetical protein; Provisional |
| >TIGR02052 MerP mercuric transport protein periplasmic component | Back alignment and domain information |
|---|
Probab=91.39 E-value=1.1 Score=38.56 Aligned_cols=65 Identities=28% Similarity=0.471 Sum_probs=49.8
Q ss_pred EEEEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCcc
Q 002770 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEA 146 (883)
Q Consensus 73 ~~~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~ 146 (883)
+..+.+.||.|.+|...++..+...+++....++....+..+.++... ...+.+...+.+.||..
T Consensus 24 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~g~~~ 88 (92)
T TIGR02052 24 TVTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEK---------TNVKALTEATTDAGYPS 88 (92)
T ss_pred EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCC---------CCHHHHHHHHHhcCCCe
Confidence 456779999999999999999999999998999988888777665432 23445555556777764
|
This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403). |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=90.97 E-value=1.9 Score=46.73 Aligned_cols=90 Identities=14% Similarity=0.223 Sum_probs=57.9
Q ss_pred EEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHH---HHHHHHcCCCCc--eEEEecCccchHHHHHHHhh---cC
Q 002770 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAV---AATAKEVGIGKE--YINSSLTPQQKSEVISTLQT---SG 751 (883)
Q Consensus 680 G~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a---~~ia~~~gi~~~--~v~~~~~p~~K~~~v~~l~~---~g 751 (883)
|++.-.+..-+++.++|++|++.|++++++|+....+. ..-.+.+|+... .++ ++.. ...+.|++ .+
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~---ts~~--~~~~~l~~~~~~~ 85 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLF---SSAL--CAARLLRQPPDAP 85 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEe---cHHH--HHHHHHHhhCcCC
Confidence 44555677788899999999999999999999654333 233466787421 222 1111 22233444 35
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEE
Q 002770 752 HHVAMVGDGINDAPSLALADVGIA 775 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa 775 (883)
..|.++|+. .....++.+++-+.
T Consensus 86 ~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 86 KAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred CEEEEEcCH-HHHHHHHHCCCEEe
Confidence 689999985 34566777776654
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=90.57 E-value=1.6 Score=46.50 Aligned_cols=80 Identities=24% Similarity=0.275 Sum_probs=54.1
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHH---HHHcCCCC-ceEEEecCc--------cchHHHHHHHhhcCC-
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAAT---AKEVGIGK-EYINSSLTP--------QQKSEVISTLQTSGH- 752 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~i---a~~~gi~~-~~v~~~~~p--------~~K~~~v~~l~~~g~- 752 (883)
.+.-|++.+..+.+++.|++++++||+....-... .++.|... +.++-+-.. +.|...-+.+.++|+
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~~~LiLR~~~D~~~~~av~yKs~~R~~li~eGYr 223 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTWEKLILKDPQDNSAENAVEYKTAARAKLIQEGYN 223 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCcceeeecCCCCCccchhHHHHHHHHHHHHHcCce
Confidence 45567999999999999999999999986533222 24468852 344444221 124444455666765
Q ss_pred eEEEEcCCccCHH
Q 002770 753 HVAMVGDGINDAP 765 (883)
Q Consensus 753 ~v~~vGDg~ND~~ 765 (883)
.++.+||..+|..
T Consensus 224 Iv~~iGDq~sDl~ 236 (275)
T TIGR01680 224 IVGIIGDQWNDLK 236 (275)
T ss_pred EEEEECCCHHhcc
Confidence 5678999999973
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=90.52 E-value=0.55 Score=48.99 Aligned_cols=88 Identities=13% Similarity=0.096 Sum_probs=70.3
Q ss_pred CCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc---eEE------EecCccchHHHHHHHhhcCCeEEE
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE---YIN------SSLTPQQKSEVISTLQTSGHHVAM 756 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~---~v~------~~~~p~~K~~~v~~l~~~g~~v~~ 756 (883)
.++.+++.+.+++|++.|+.+.+.|+-+...+..+.+.+|+... .+. ..-.|+-=+...+.|.-....++.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~Cvv 164 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVV 164 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHHeEE
Confidence 36789999999999999999999999999999999999998521 111 123344446666666556788999
Q ss_pred EcCCccCHHHHHhCCee
Q 002770 757 VGDGINDAPSLALADVG 773 (883)
Q Consensus 757 vGDg~ND~~al~~Advg 773 (883)
|.|..|.+.|-++|+.-
T Consensus 165 iEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 165 VEDSPAGIQAAKAAGMR 181 (221)
T ss_pred EecchhHHHHHHHCCCE
Confidence 99999999999999953
|
|
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.43 E-value=0.53 Score=49.69 Aligned_cols=83 Identities=14% Similarity=0.266 Sum_probs=54.0
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC--ceEE-Eec----Cccch--HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYIN-SSL----TPQQK--SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~--~~v~-~~~----~p~~K--~~~v~~l~~~g~~v~~v 757 (883)
++-|++.++++.|++. +++.++|..+.. .+..|+.. +.++ +.- .|... ...++.+.-....++||
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~V 186 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGEILHV 186 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhHEEEE
Confidence 4568999999999875 899999976544 25667742 1222 221 22211 22233343345679999
Q ss_pred cCC-ccCHHHHHhCCeeEE
Q 002770 758 GDG-INDAPSLALADVGIA 775 (883)
Q Consensus 758 GDg-~ND~~al~~AdvgIa 775 (883)
||. ..|+.+-+.|++-..
T Consensus 187 GD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 187 GDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred cCCcHHHHHHHHHCCCeEE
Confidence 999 599999999997443
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.94 E-value=1.1 Score=45.03 Aligned_cols=49 Identities=16% Similarity=0.345 Sum_probs=40.9
Q ss_pred EEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH---HHcCC
Q 002770 678 IIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATA---KEVGI 726 (883)
Q Consensus 678 ~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia---~~~gi 726 (883)
+-|.+.++|..-|++.|+++.|+.++.+|..+|.-..++-+.+. +++|+
T Consensus 14 lSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 14 LSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred ccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 56999999999999999999999999999999876666555554 44676
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=88.22 E-value=11 Score=44.34 Aligned_cols=39 Identities=18% Similarity=0.203 Sum_probs=35.5
Q ss_pred cccCCCeEEEeeCCCcCCCCEEEECCCCeeeeeEEEEee
Q 002770 333 VLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAG 371 (883)
Q Consensus 333 ~~~~dg~~~~V~~~~l~~GDiV~v~~Ge~IPaDg~vl~G 371 (883)
+.+|||...++|..-|+.||||-++||+.-||.+.=++|
T Consensus 159 ~afRDGhlm~lP~~LLVeGDiIa~RPGQeafan~~g~~d 197 (1354)
T KOG4383|consen 159 SAFRDGHLMELPRILLVEGDIIAFRPGQEAFANCEGFDD 197 (1354)
T ss_pred HHhccCeeeecceeEEEeccEEEecCCccccccccccCC
Confidence 457999999999999999999999999999998877665
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=88.19 E-value=5.7 Score=44.24 Aligned_cols=56 Identities=23% Similarity=0.329 Sum_probs=40.3
Q ss_pred CCCeEEEEEecCceEEEEEEecC--CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH
Q 002770 664 YSKSVVYVGREGEGIIGAIAISD--SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATA 721 (883)
Q Consensus 664 ~g~~~~~~a~~~~~~lG~i~l~D--~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia 721 (883)
....++++-+||. ++-+.---| .+.++..++|+.|. .+..++++||++......+.
T Consensus 96 ~~~~ll~lDyDGT-L~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 96 GKQIVMFLDYDGT-LSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred CCceEEEEecCcc-CCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHc
Confidence 3456777788886 554332223 36789999999998 45799999999887776554
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=87.59 E-value=1.2 Score=48.07 Aligned_cols=57 Identities=19% Similarity=0.377 Sum_probs=45.8
Q ss_pred EEEEEecCceEEEEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCC
Q 002770 668 VVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK 728 (883)
Q Consensus 668 ~~~~a~~~~~~lG~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~ 728 (883)
+++.-.||. ++. =.+.+.+++.++|++|+++|++++++||++...+..+.+++|+..
T Consensus 6 li~~DlDGT-Ll~---~~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 6 LVFTDLDGT-LLD---HHTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred EEEEcCccc-CcC---CCCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 445555654 332 134677889999999999999999999999999999999999853
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=86.95 E-value=7.4 Score=45.66 Aligned_cols=86 Identities=13% Similarity=0.151 Sum_probs=60.3
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-cCCCCc-----------eEEEe------cCccchHHHHHHHhh
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKE-VGIGKE-----------YINSS------LTPQQKSEVISTLQT 749 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~-~gi~~~-----------~v~~~------~~p~~K~~~v~~l~~ 749 (883)
+++++.+ .++++|.+ +++|+-...-++.+|++ +|++.. .+..+ +.-++|.+-++....
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~~~~g 186 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVLKEFG 186 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCCCCCccHHHHHHHHHHhC
Confidence 5666555 44567755 99999999999999987 898621 01111 233458777764332
Q ss_pred cCCeEEEEcCCccCHHHHHhCCeeEEee
Q 002770 750 SGHHVAMVGDGINDAPSLALADVGIALQ 777 (883)
Q Consensus 750 ~g~~v~~vGDg~ND~~al~~AdvgIa~~ 777 (883)
......+.||..||.|||+.||-..+++
T Consensus 187 ~~~~~~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 187 DALPDLGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred CCCceEEEECCccHHHHHHhCCccEEeC
Confidence 1122378999999999999999999993
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=86.71 E-value=1.4 Score=45.64 Aligned_cols=40 Identities=23% Similarity=0.273 Sum_probs=36.7
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG 727 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~ 727 (883)
..+.++++|++|+++|++++++||++...+..+.+.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455899999999999999999999999999999999985
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=86.68 E-value=0.57 Score=46.32 Aligned_cols=89 Identities=8% Similarity=0.013 Sum_probs=61.8
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCce---EEEe-cCccchHHHHHHHhh---cCCeEEEE
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEY---INSS-LTPQQKSEVISTLQT---SGHHVAMV 757 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~~---v~~~-~~p~~K~~~v~~l~~---~g~~v~~v 757 (883)
.=..||++.+.+++|.+. +++++.|......|..+.+.++..... ++.+ -....|..+++.|.. ....|+||
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~~~~~~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVFTNGKYVKDLSLVGKDLSKVIII 118 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEEeCCCEEeEchhcCCChhhEEEE
Confidence 335799999999999987 999999999999999999999975311 2221 111112224444443 34679999
Q ss_pred cCCccCHHHHHhCCeeE
Q 002770 758 GDGINDAPSLALADVGI 774 (883)
Q Consensus 758 GDg~ND~~al~~AdvgI 774 (883)
||...|..+-..+++-|
T Consensus 119 DD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 119 DNSPYSYSLQPDNAIPI 135 (162)
T ss_pred eCChhhhccCccCEeec
Confidence 99988876655554443
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=85.25 E-value=5 Score=39.25 Aligned_cols=89 Identities=13% Similarity=0.087 Sum_probs=64.6
Q ss_pred cCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHH---HHHHc-----CCCCceEEE---------------ecCccchH
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAA---TAKEV-----GIGKEYINS---------------SLTPQQKS 741 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~---ia~~~-----gi~~~~v~~---------------~~~p~~K~ 741 (883)
.|..++++.+..+.+++.|++++-+|+++...+.. ..++. +++.-.+.. +-..+.|.
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~~sP~~l~~al~rEvi~~~p~~fK~ 104 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVLLSPDSLFSALHREVISKDPEEFKI 104 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEEECCcchhhhhhccccccChHHHHH
Confidence 36889999999999999999999999998765543 33333 443222221 11233688
Q ss_pred HHHHHHhhc-----CCeEEEEcCCccCHHHHHhCCee
Q 002770 742 EVISTLQTS-----GHHVAMVGDGINDAPSLALADVG 773 (883)
Q Consensus 742 ~~v~~l~~~-----g~~v~~vGDg~ND~~al~~Advg 773 (883)
..++.++.. ....+..|+..+|+.+-++++|-
T Consensus 105 ~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 105 ACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 889988874 34678899999999999887753
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=84.40 E-value=2.9 Score=43.33 Aligned_cols=116 Identities=16% Similarity=0.195 Sum_probs=70.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc---eEEEe----cCccch--HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE---YINSS----LTPQQK--SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~---~v~~~----~~p~~K--~~~v~~l~~~g~~v~~v 757 (883)
+.-+++.+++++|++. ++++++|.-.........+++|+.+. .+.+. ..|+.+ ..+.+.+.-....++||
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~V 177 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFV 177 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEE
Confidence 4567889999999988 99999998788888999999997421 12222 344333 22333333335679999
Q ss_pred cCC-ccCHHHHHhCCe-eEEeecCCcc-HHHHhhcCEEEeCCChhhHHHHH
Q 002770 758 GDG-INDAPSLALADV-GIALQIEAQE-NAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 758 GDg-~ND~~al~~Adv-gIa~~~~~~~-~~a~~~ad~vl~~~~~~~l~~~i 805 (883)
||. .||+..-+.++. +|-+...... .......+..+ .++..+..++
T Consensus 178 gD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i--~~l~~l~~~~ 226 (229)
T COG1011 178 GDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEI--SSLAELLDLL 226 (229)
T ss_pred CCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEE--cCHHHHHHHH
Confidence 996 677466666665 5555111111 01114455555 3366665554
|
|
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=83.04 E-value=3.2 Score=48.83 Aligned_cols=83 Identities=13% Similarity=0.203 Sum_probs=55.0
Q ss_pred CChhHHHHHHHHHHCCCEEEEEcCCcH------------HHHHHHHHHcCCCCceEEEecC-ccch--HHHHHHH-hhc-
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDRE------------EAVAATAKEVGIGKEYINSSLT-PQQK--SEVISTL-QTS- 750 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lTGd~~------------~~a~~ia~~~gi~~~~v~~~~~-p~~K--~~~v~~l-~~~- 750 (883)
+-+++.+.++.|++.|++++++|.-.. ..+..+.+++|+.-+.+++.-. .-.| -..+..+ ++.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgipfdviia~~~~~~RKP~pGm~~~a~~~~~ 277 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVPFQVFIAIGAGFYRKPLTGMWDHLKEEAN 277 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCceEEEEeCCCCCCCCCCHHHHHHHHHhcC
Confidence 468999999999999999999997555 3577889999986333332110 0012 2233222 221
Q ss_pred ------CCeEEEEcCCccCHHHHHhC
Q 002770 751 ------GHHVAMVGDGINDAPSLALA 770 (883)
Q Consensus 751 ------g~~v~~vGDg~ND~~al~~A 770 (883)
...+.||||...|..+-+.|
T Consensus 278 ~~~~Id~~~S~~VGDaagr~~~g~~a 303 (526)
T TIGR01663 278 DGTEIQEDDCFFVGDAAGRPANGKAA 303 (526)
T ss_pred cccCCCHHHeEEeCCcccchHHHHhc
Confidence 24789999999998764433
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=82.69 E-value=6.6 Score=39.02 Aligned_cols=82 Identities=15% Similarity=0.206 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHHCCCEEEEEc-CCcHHHHHHHHHHcCCC----------CceEEEecCccchHHHHHHHhhc----CC
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLS-GDREEAVAATAKEVGIG----------KEYINSSLTPQQKSEVISTLQTS----GH 752 (883)
Q Consensus 688 lr~~~~~~i~~L~~~Gi~v~~lT-Gd~~~~a~~ia~~~gi~----------~~~v~~~~~p~~K~~~v~~l~~~----g~ 752 (883)
+-|+++++++.|++.|+++.++| -+.+..|+.+.+.+++. .-.-+.+.-|..|..-.+.+++. ..
T Consensus 46 lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~~~eI~~gsK~~Hf~~i~~~tgI~y~ 125 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFDYLEIYPGSKTTHFRRIHRKTGIPYE 125 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCECEEEESSS-HHHHHHHHHHHH---GG
T ss_pred eCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcchhheecCchHHHHHHHHHhcCCChh
Confidence 56899999999999999999999 57889999999999997 43445667788999999888864 35
Q ss_pred eEEEEcCCccCHHHHHh
Q 002770 753 HVAMVGDGINDAPSLAL 769 (883)
Q Consensus 753 ~v~~vGDg~ND~~al~~ 769 (883)
.++++=|-.......+.
T Consensus 126 eMlFFDDe~~N~~~v~~ 142 (169)
T PF12689_consen 126 EMLFFDDESRNIEVVSK 142 (169)
T ss_dssp GEEEEES-HHHHHHHHT
T ss_pred HEEEecCchhcceeeEe
Confidence 68888886555555544
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=81.81 E-value=3.2 Score=44.77 Aligned_cols=58 Identities=17% Similarity=0.287 Sum_probs=46.8
Q ss_pred CeEEEEEecCceEEEEEEecCC--CC-hhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCC
Q 002770 666 KSVVYVGREGEGIIGAIAISDS--LR-HDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIG 727 (883)
Q Consensus 666 ~~~~~~a~~~~~~lG~i~l~D~--lr-~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~ 727 (883)
..++++-.||. ++ .=+.+ +| |++.+++++|+++|++++++|+.....+....+++|+.
T Consensus 126 ~kvIvFDLDgT-Li---~~~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd 186 (301)
T TIGR01684 126 PHVVVFDLDST-LI---TDEEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLD 186 (301)
T ss_pred ceEEEEecCCC-Cc---CCCCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCC
Confidence 34666666775 32 22433 45 99999999999999999999999999999999999996
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=81.35 E-value=1.4 Score=43.69 Aligned_cols=77 Identities=17% Similarity=0.101 Sum_probs=52.7
Q ss_pred CCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCCc---eEEEec----Cccch--HHHHHHHhhcCCeEEEE
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE---YINSSL----TPQQK--SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~gi~~~---~v~~~~----~p~~K--~~~v~~l~~~g~~v~~v 757 (883)
++.|++.++++ ++.++|.-+........+.+|+..- .+.++. .|+.. ....+.+.-....++||
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~l~v 162 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRVLMV 162 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHeEeE
Confidence 46788888888 3679999999888989999998521 122221 22222 44445554445789999
Q ss_pred cCCccCHHHHHhC
Q 002770 758 GDGINDAPSLALA 770 (883)
Q Consensus 758 GDg~ND~~al~~A 770 (883)
||...|+.+-+.+
T Consensus 163 gD~~~Di~~A~~~ 175 (175)
T TIGR01493 163 AAHQWDLIGARKF 175 (175)
T ss_pred ecChhhHHHHhcC
Confidence 9999999886653
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PRK13748 putative mercuric reductase; Provisional | Back alignment and domain information |
|---|
Probab=80.76 E-value=4.6 Score=48.41 Aligned_cols=66 Identities=24% Similarity=0.405 Sum_probs=53.1
Q ss_pred EEEecCCCChhhHHHHHHhhccCCCceEEEEecCCCeEEEEecccchhhhhhhhcCCHHHHHHHHHhcCCcccccc
Q 002770 75 LLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRV 150 (883)
Q Consensus 75 ~l~I~GM~C~~C~~~Ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~~ 150 (883)
.+.++||+|++|..+++..+...+++....+++..++..+.+++. ...+.+...+++.||......
T Consensus 3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~----------~~~~~i~~~i~~~g~~~~~~~ 68 (561)
T PRK13748 3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVG----------TSPDALTAAVAGLGYRATLAD 68 (561)
T ss_pred EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCC----------CCHHHHHHHHHHcCCeeeccC
Confidence 466899999999999999999999999999999999877776542 245666666788898865543
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.40 E-value=9.5 Score=40.92 Aligned_cols=106 Identities=16% Similarity=0.265 Sum_probs=70.6
Q ss_pred EEEEecCCCChhHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHc----CCC--CceEEEecCccchHHHHHHHhhc--C
Q 002770 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEV----GIG--KEYINSSLTPQQKSEVISTLQTS--G 751 (883)
Q Consensus 680 G~i~l~D~lr~~~~~~i~~L~~~Gi~v~~lTGd~~~~a~~ia~~~----gi~--~~~v~~~~~p~~K~~~v~~l~~~--g 751 (883)
|++.-.+++=|++.++|++|+++|++++++|.....+...+++++ |++ .+.++.. . ......++++ +
T Consensus 17 Gvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS---~--~at~~~l~~~~~~ 91 (269)
T COG0647 17 GVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS---G--DATADYLAKQKPG 91 (269)
T ss_pred CceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH---H--HHHHHHHHhhCCC
Confidence 678888999999999999999999999999988777766555554 331 1122211 1 1222333333 3
Q ss_pred CeEEEEcCCccCHHHHHhCCeeEEeecCCccHHHHhhcCEEEeCCC
Q 002770 752 HHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNK 797 (883)
Q Consensus 752 ~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad~vl~~~~ 797 (883)
.+|.++|. ..+...|+.+++-+.- .... ...|+|+...|
T Consensus 92 ~kv~viG~-~~l~~~l~~~G~~~~~--~~~~----~~~d~Vv~g~d 130 (269)
T COG0647 92 KKVYVIGE-EGLKEELEGAGFELVD--EEEP----ARVDAVVVGLD 130 (269)
T ss_pred CEEEEECC-cchHHHHHhCCcEEec--cCCC----CcccEEEEecC
Confidence 68999995 5677899999987775 2221 12677776533
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 883 | ||||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 2e-97 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 6e-95 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 2e-92 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 2e-30 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 1e-29 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 2e-28 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 2e-28 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 2e-27 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 2e-25 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 3e-21 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-20 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 1e-20 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 2e-19 | ||
| 2hc8_A | 113 | Structure Of The A. Fulgidus Copa A-Domain Length = | 1e-18 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 8e-13 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-11 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 3e-11 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 3e-11 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 4e-11 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-10 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-10 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-09 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-08 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-08 | ||
| 2voy_J | 118 | Cryoem Model Of Copa, The Copper Transporting Atpas | 8e-04 |
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
| >pdb|2HC8|A Chain A, Structure Of The A. Fulgidus Copa A-Domain Length = 113 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|2VOY|J Chain J, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 118 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 883 | |||
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 0.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 0.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 0.0 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-80 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 8e-80 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-75 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 8e-54 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-51 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 8e-38 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 1e-37 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 2e-17 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 2e-13 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-12 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 5e-10 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 3e-12 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 8e-10 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 4e-12 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 2e-11 | |
| 2kkh_A | 95 | Putative heavy metal transporter; zinc transport, | 3e-10 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 3e-10 | |
| 2qif_A | 69 | Copper chaperone COPZ; tetranuclear Cu(I) cluster; | 1e-09 | |
| 2l3m_A | 71 | Copper-ION-binding protein; structural genomics, c | 3e-09 | |
| 2ew9_A | 149 | Copper-transporting ATPase 2; copper trafficking, | 5e-09 | |
| 2ew9_A | 149 | Copper-transporting ATPase 2; copper trafficking, | 2e-08 | |
| 2rop_A | 202 | Copper-transporting ATPase 2; wilson protein, mobi | 5e-09 | |
| 2rop_A | 202 | Copper-transporting ATPase 2; wilson protein, mobi | 2e-07 | |
| 1y3j_A | 77 | Copper-transporting ATPase 1; ferrodoxin-like fold | 5e-09 | |
| 2g9o_A | 90 | Copper-transporting ATPase 1; menkes disease, solu | 6e-09 | |
| 1osd_A | 72 | MERP, hypothetical protein MERP; mercury resistanc | 8e-09 | |
| 1p6t_A | 151 | Potential copper-transporting ATPase; COPA, P-type | 1e-08 | |
| 1p6t_A | 151 | Potential copper-transporting ATPase; COPA, P-type | 5e-07 | |
| 3cjk_B | 75 | Copper-transporting ATPase 1; HAH1, ATP7B, menkes | 1e-08 | |
| 3dxs_X | 74 | Copper-transporting ATPase RAN1; CXXC motif, ferre | 2e-08 | |
| 1aw0_A | 72 | Menkes copper-transporting ATPase; copper-binding | 2e-08 | |
| 1kvi_A | 79 | Copper-transporting ATPase 1; menkes, Cu-protein, | 2e-08 | |
| 1yjr_A | 75 | Copper-transporting ATPase 1; metallochaperone, pr | 3e-08 | |
| 2ldi_A | 71 | Zinc-transporting ATPase; metal homeostasis, metal | 3e-08 | |
| 2kt2_A | 69 | Mercuric reductase; nmera, MERA, HMA domain, mercu | 4e-08 | |
| 1fvq_A | 72 | Copper-transporting ATPase; APO-CCC2A, hydrolase; | 5e-08 | |
| 1q8l_A | 84 | Copper-transporting ATPase 1; metal binding protei | 5e-08 | |
| 2roe_A | 66 | Heavy metal binding protein; NMR {Thermus thermoph | 7e-08 | |
| 1opz_A | 76 | Potential copper-transporting ATPase; mutation, fo | 8e-08 | |
| 1cpz_A | 68 | Protein (COPZ); copper chaperone, metal transport, | 1e-07 | |
| 1yg0_A | 66 | COP associated protein; open-faced beta-sandwich, | 1e-07 | |
| 1jww_A | 80 | Potential copper-transporting ATPase; beta-alpha-b | 1e-07 | |
| 2xmw_A | 71 | PACS-N, cation-transporting ATPase PACS; hydrolase | 2e-07 | |
| 2ofg_X | 111 | Zinc-transporting ATPase; ferredoxin-like fold, be | 2e-07 | |
| 1mwy_A | 73 | ZNTA; open-faced beta-sandwich fold, beta-alpha-be | 2e-07 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 6e-07 | |
| 2k2p_A | 85 | Uncharacterized protein ATU1203; putative metal-bi | 1e-06 | |
| 2xmm_A | 64 | SSR2857 protein, ATX1; metal transport, copper hom | 3e-06 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 6e-06 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 6e-06 | |
| 3fry_A | 73 | Probable copper-exporting P-type ATPase A; transpo | 7e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 7e-06 | |
| 2kyz_A | 67 | Heavy metal binding protein; structural genomics, | 9e-06 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 1e-05 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-05 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 2aj0_A | 71 | Probable cadmium-transporting ATPase; ferrodoxin-l | 4e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 4e-05 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 4e-05 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 5e-05 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 8e-05 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 8e-05 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 1e-04 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 1e-04 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 1e-04 | |
| 2crl_A | 98 | Copper chaperone for superoxide dismutase; SOD1, f | 1e-04 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 1e-04 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 2e-04 |
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 646 bits (1668), Expect = 0.0
Identities = 267/799 (33%), Positives = 418/799 (52%), Gaps = 95/799 (11%)
Query: 76 LDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESL 135
+ V+GM C CV +++ + + + V+ V VN+ TETA I+ + ++ E++
Sbjct: 6 VRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRID---------FETI 56
Query: 136 GKRLMECGFEAKRRVSGTGVAENVKKWKELAKKREDLLVKSRNRVALAWTLVALCCGSHA 195
+ + + G+ A + + L++ + L V L+ L
Sbjct: 57 KRVIEDLGYGVVDEQ-----AAVSAEVEHLSRMKRKLYVA----AFAGVLLLFL------ 101
Query: 196 SHILHSLGIHIAHGPLWELLDNSYVKGGFALGALFGPGR----ASLMAFRKGSPNMNSLV 251
+ I + + +LL AL A+F G A+ A R+ + NM+ +
Sbjct: 102 -----AHFISLPYEDFVQLL--------IALPAIFYSGSSIFKAAFSALRRRTLNMDVMY 148
Query: 252 GFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLS 311
G AFL S++S + SF+E V+LL F+LLGR+LE RA+ R + +L+
Sbjct: 149 SMGVGAAFLASVLSTAGVLPR-EYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVG 207
Query: 312 LVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAG 371
L + + ++ E + VP +++ VGD V+V PGE IPVDG V+ G
Sbjct: 208 LQAKTAVVIRDGKE---------------IAVPVEEVAVGDIVIVRPGEKIPVDGVVVEG 252
Query: 372 RSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQG 431
S VDESM+SGE +PV K +G V TIN G L+I A G +++++IV +VE+A G
Sbjct: 253 ESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMG 312
Query: 432 REAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLK 491
+ PIQRLAD + F+ +V+ ++ + F +WY+I PLL +
Sbjct: 313 SKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA----------------HAPLLFAFT 356
Query: 492 LSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLT 551
+ VLVV+CPCA GLATPTA+ VG GA+ G+LI+ D LE ++ + DKTGTLT
Sbjct: 357 TLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT 416
Query: 552 EGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPG 611
+GKP V ++ DE E+L++AA E+ + HPIA+AIV KA + G
Sbjct: 417 KGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAG 476
Query: 612 FGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYV 671
G V + VG +R + + +E A+ E +K+ V V
Sbjct: 477 EG----VVADGILVGN-----KRLMEDFGVAVSNEVELALEKLERE-------AKTAVIV 520
Query: 672 GREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYI 731
R G + G IA+SD+L+ A+ V+ L++ GIK +++GD + A ++E+ + + +
Sbjct: 521 ARNGR-VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL--DLV 577
Query: 732 NSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASI 791
+ + P QKSE + LQ + VA VGDGINDAP+LA AD+GIA + + + A + I
Sbjct: 578 IAEVLPHQKSEEVKKLQ-AKEVVAFVGDGINDAPALAQADLGIA--VGSGSDVAVESGDI 634
Query: 792 ILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSG 851
+L+ + L VV A+ L++ TM+K+ QN+ WA+ YNV+ IP AAG L P + P +G
Sbjct: 635 VLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAG 694
Query: 852 GLMALSSIFVVSNSLLLQF 870
MA+SS+ VV+NSLLL+
Sbjct: 695 LAMAMSSVSVVANSLLLRN 713
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 618 bits (1597), Expect = 0.0
Identities = 238/727 (32%), Positives = 369/727 (50%), Gaps = 82/727 (11%)
Query: 164 ELAKKREDLLVKSRNRVALAWTL-VALCCGSHASHILHSLGIHIAHGPLWELLDNSYVKG 222
+++ + R R +A L + + H L I +LL
Sbjct: 69 TVSEVVSPEYLDMRRRFWIALMLTIPVVILEMGGHGLKHF-ISGNGSSWIQLL------- 120
Query: 223 GFALGALFGPGR----ASLMAFRKGSPNMNSLVGFGSIVAFLISLVSLLKPELEWDAS-- 276
A + G + + G NM +L+ G VA++ S+V++L P + A
Sbjct: 121 -LATPVVLWGGWPFFKRGWQSLKTGQLNMFTLIAMGIGVAWIYSMVAVLWPGVFPHAFRS 179
Query: 277 -------FFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSS 329
+FE ++ VLLG+ LE +AR + S + LL LV + +
Sbjct: 180 QEGVVAVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIK-------- 231
Query: 330 ADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFK 389
D EV D++ VGD + V PGE IPVDG V GRS VDESM++GE +PV K
Sbjct: 232 ------EDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSFVDESMVTGEPIPVAK 285
Query: 390 EEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVY 449
E V TIN G ++A GS++M+++IV MV +AQ APIQRLAD ++G FV
Sbjct: 286 EASAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVP 345
Query: 450 SVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLAT 509
+V+ ++ +F W +G Q L L +V VL+++CPCALGLAT
Sbjct: 346 AVILVAVLSFIVWALLGPQ---------------PALSYGLIAAVSVLIIACPCALGLAT 390
Query: 510 PTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESE 569
P +I+VG GA+ G+LI+ + LER+ +++ L +DKTGTLTEG P + + + + E
Sbjct: 391 PMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFVEDN 450
Query: 570 ILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLE 629
L +AAA+E + HP+A AIV+ A+ L+ A G G++G+VDG VA+G
Sbjct: 451 ALALAAALEHQSEHPLANAIVHAAKEKGLSLGSVEAFEAPTGKGVVGQVDGHHVAIGNAR 510
Query: 630 WVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLR 689
+ E D L + SV+++ +G+ + + + D ++
Sbjct: 511 LMQEH------GGDNAPLFEKADELRGK-------GASVMFMAVDGK-TVALLVVEDPIK 556
Query: 690 HDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQT 749
T+ LQQ GI+ ++L+GD + A A +GI K+ + + + P+ KS ++S L+
Sbjct: 557 SSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI-KKVV-AEIMPEDKSRIVSELKD 614
Query: 750 SGHHVAMVGDGINDAPSLALADVGIAL------QIEAQENAASTAASIILLGNKLSQVVD 803
G VAM GDG+NDAP+LA AD+GIA+ IE +A + LL L +
Sbjct: 615 KGLIVAMAGDGVNDAPALAKADIGIAMGTGTDVAIE--------SAGVTLLHGDLRGIAK 666
Query: 804 ALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFVVS 863
A L+++TM+ + QNL +A YNV+ +P+AAG L P ++P ++ MALSS+ V+
Sbjct: 667 ARRLSESTMSNIRQNLFFAFIYNVLGVPLAAGVLYPLTGLLLSPMIAAAAMALSSVSVII 726
Query: 864 NSLLLQF 870
N+L L+
Sbjct: 727 NALRLKR 733
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 594 bits (1535), Expect = 0.0
Identities = 244/669 (36%), Positives = 368/669 (55%), Gaps = 60/669 (8%)
Query: 206 IAHGPLWELLDNSYVKGGFALGALFGPGR----ASLMAFRKGSPNMNSLVGFGSIVAFLI 261
+AH +V+ AL A+F G A+ A R+ + NM+ + G AFL
Sbjct: 23 LAHFISLPY--EDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLA 80
Query: 262 SLVSLLKPELEWDASFFEEPVMLLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVI 321
S++S + SF+E V+LL F+LLGR+LE RA+ R + +L+ L + + ++
Sbjct: 81 SVLSTAGVLPR-EYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIR 139
Query: 322 TSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLS 381
E + VP +++ VGD V+V PGE IPVDG V+ G S VDESM+S
Sbjct: 140 DGKE---------------IAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMIS 184
Query: 382 GESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLAD 441
GE +PV K +G V TIN G L+I A G +++++IV +VE+A G + PIQRLAD
Sbjct: 185 GEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLAD 244
Query: 442 AIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSC 501
+ F+ +V+ ++ + F +WY+I PLL + + VLVV+C
Sbjct: 245 KVVAYFIPTVLLVAISAFIYWYFIA----------------HAPLLFAFTTLIAVLVVAC 288
Query: 502 PCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVA 561
PCA GLATPTA+ VG GA+ G+LI+ D LE ++ + DKTGTLT+GKP V ++
Sbjct: 289 PCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLV 348
Query: 562 SFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGR 621
DE E+L++AA E+ + HPIA+AIV KA + G G V
Sbjct: 349 PLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEG----VVAD 404
Query: 622 LVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGA 681
+ VG +R + + +E A+ E +K+ V V R G + G
Sbjct: 405 GILVGN-----KRLMEDFGVAVSNEVELALEKLERE-------AKTAVIVARNGR-VEGI 451
Query: 682 IAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKS 741
IA+SD+L+ A+ V+ L++ GIK +++GD + A ++E+ + + + + + P QKS
Sbjct: 452 IAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL--DLVIAEVLPHQKS 509
Query: 742 EVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQV 801
E + LQ + VA VGDGINDAP+LA AD+GIA + + + A + I+L+ + L V
Sbjct: 510 EEVKKLQ-AKEVVAFVGDGINDAPALAQADLGIA--VGSGSDVAVESGDIVLIRDDLRDV 566
Query: 802 VDALDLAKATMAKVYQNLSWAVAYNVVAIPIAAGALLPQYDFAMTPSLSGGLMALSSIFV 861
V A+ L++ TM+K+ QN+ WA+ YNV+ IP AAG L P + P +G MA+SS+ V
Sbjct: 567 VAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSV 626
Query: 862 VSNSLLLQF 870
V+NSLLL+
Sbjct: 627 VANSLLLRN 635
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 260 bits (666), Expect = 2e-80
Identities = 98/296 (33%), Positives = 154/296 (52%), Gaps = 22/296 (7%)
Query: 527 IRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIA 586
+R ER + + DKTGTLTEG+ V ++ F + E E+L+IAA++E + HPIA
Sbjct: 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSEDELLQIAASLEARSEHPIA 60
Query: 587 KAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQH 646
AIV +AE A PG G+ G V+GR V + ++ E
Sbjct: 61 AAIVEEAEKRGFGLTEVEEFRAIPGKGVEGIVNGRRYMVVSPGYIRE------------- 107
Query: 647 LEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKT 706
L +L K+VV++ + GE + G IA++D +R ++ + L+ GIK
Sbjct: 108 LGIKTDESVEKLKQQ---GKTVVFILKNGE-VSGVIALADRIRPESREAISKLKAIGIKC 163
Query: 707 LLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPS 766
++L+GD A+E+G+ +Y L P +K+E + +Q + AMVGDG+NDAP+
Sbjct: 164 MMLTGDNRFVAKWVAEELGL-DDYFAEVL-PHEKAEKVKEVQ-QKYVTAMVGDGVNDAPA 220
Query: 767 LALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWA 822
LA ADVGIA I A + A A I+L+ N V ++L++ T +K + +W+
Sbjct: 221 LAQADVGIA--IGAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWS 274
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 257 bits (660), Expect = 8e-80
Identities = 85/305 (27%), Positives = 143/305 (46%), Gaps = 56/305 (18%)
Query: 520 GAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEK 579
+G++I+ +V E++ ID + +KTGTLT G P V +S L AA+VE
Sbjct: 9 MLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQF----IGDSLSLAYAASVEA 64
Query: 580 TATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQG 639
++HPIAKAIV A+ + + G G+ G++ +++ V + +
Sbjct: 65 LSSHPIAKAIVKYAKEQGVKILEVKDFKEISGIGVRGKISDKIIEVK---------KAEN 115
Query: 640 DHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSL 699
+ + V GE I + ISD R + + + L
Sbjct: 116 --------------------------NNDIAVYINGE-PIASFNISDVPRPNLKDYLEKL 148
Query: 700 QQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGD 759
+ +G+K ++LSGD+E+ V +KE+ I +EY S+L+P+ K +I L+ +G+ V M+GD
Sbjct: 149 KNEGLKIIILSGDKEDKVKELSKELNI-QEYY-SNLSPEDKVRIIEKLKQNGNKVLMIGD 206
Query: 760 GINDAPSLALADVGIAL------QIEAQENAASTAASIILLGNKLSQVVDALDLAKATMA 813
G+NDA +LALADV +A+ A IIL+ N + ++ + K
Sbjct: 207 GVNDAAALALADVSVAMGNGVDISKN--------VADIILVSNDIGTLLGLIKNRKRLSN 258
Query: 814 KVYQN 818
+ N
Sbjct: 259 AIPSN 263
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 247 bits (634), Expect = 1e-75
Identities = 102/299 (34%), Positives = 162/299 (54%), Gaps = 22/299 (7%)
Query: 516 GTSLGAKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAA 575
G+ GA+ G+LI+ D LE ++ + DKTGTLT+GKP V ++ DE E+L++AA
Sbjct: 9 GSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAA 68
Query: 576 AVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERF 635
E+ + HPIA+AIV KA + G G V + VG +R
Sbjct: 69 IAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEG----VVADGILVGN-----KRL 119
Query: 636 QKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHT 695
+ + +E A+ E +K+ V V R G + G IA+SD+L+ A+
Sbjct: 120 MEDFGVAVSNEVELALEKLERE-------AKTAVIVARNGR-VEGIIAVSDTLKESAKPA 171
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
V+ L++ GIK +++GD + A ++E+ + + + + + P QKSE + LQ + VA
Sbjct: 172 VQELKRMGIKVGMITGDNWRSAEAISRELNL--DLVIAEVLPHQKSEEVKKLQ-AKEVVA 228
Query: 756 MVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAK 814
VGDGINDAP+LA AD+GIA + + + A + I+L+ + L VV A+ L++ TM+K
Sbjct: 229 FVGDGINDAPALAQADLGIA--VGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSK 285
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 201 bits (513), Expect = 8e-54
Identities = 139/621 (22%), Positives = 251/621 (40%), Gaps = 118/621 (19%)
Query: 284 LLGFVLLGRSLEERARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEV 343
++GFV +E +A S ++EL ++ ++ VL D E+
Sbjct: 156 VVGFV------QEF---QAGSIVDELKKTLALKAV--------------VLR-DGTLKEI 191
Query: 344 PTDDIRVGDSVLVLPGETIPVDGRVLAGRSV--VDESMLSGESLPVFKEEGFTVSAGTIN 401
++ GD + V G IP DGR++ + VD+S L+GESL V K +G V A +
Sbjct: 192 EAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKGDQVFASSAV 251
Query: 402 WDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAF 461
G + +TG N+ + + ++V A G + + I + V+ +
Sbjct: 252 KRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVS 311
Query: 462 WYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLG- 520
+Y NP++ L+ ++ + ++ P L P + ++G
Sbjct: 312 SFY-----------------RSNPIVQILEFTLAITIIGVPVGL----PAVVTTTMAVGA 350
Query: 521 ---AKQGLLIRGGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFV-YDESEILKIAA- 575
AK+ +++ +E LA ++ L DKTGTLT+ K ++ + + D +++ A
Sbjct: 351 AYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLTACL 410
Query: 576 --AVEKTATHPIAKAIVNKAESLNLTSPITRG--QLAEPGF--------GILGEVDGRLV 623
+ +K I KA + + + L F ++ G +
Sbjct: 411 AASRKKKGIDAIDKAFLKSLKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERI 470
Query: 624 AV--GTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEG---I 678
G +V + ++ DH + ++ A ++ +E A+ S V + GEG I
Sbjct: 471 TCVKGAPLFVLKTVEE--DHPIPEEVDQAYKNKVAEFATRGFRSLGVAR--KRGEGSWEI 526
Query: 679 IGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS---- 734
+G + D RHD TV + G+ +L+GD T++++G+G N+
Sbjct: 527 LGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGL 586
Query: 735 -----------------------LTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD 771
+ PQ K V+ LQ G+ VAM GDG+NDAPSL AD
Sbjct: 587 GGGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKAD 646
Query: 772 VGIALQIEAQENA---ASTAASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAYNV- 827
GIA+ E + A +AA I+ L L ++DAL ++ +++ + V Y +
Sbjct: 647 TGIAV-----EGSSDAARSAADIVFLAPGLGAIIDALKTSR----QIFHRMYAYVVYRIA 697
Query: 828 ----VAIPIAAGALLPQYDFA 844
+ I + +
Sbjct: 698 LSIHLEIFLGLWIAILNRSLN 718
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 194 bits (495), Expect = 1e-51
Identities = 135/663 (20%), Positives = 252/663 (38%), Gaps = 123/663 (18%)
Query: 250 LVGFGSIVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLLGRSL---EERARIRASSDM 306
+ S V + +++++ + +++ V ++ +++ ++ EE A +
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEEN---NAGNAA 121
Query: 307 NELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDG 366
L++ ++ +++ VL D E + GD V + G+ IP D
Sbjct: 122 AALMAGLAPKTK--------------VLR-DGKWSEQEAAILVPGDIVSIKLGDIIPADA 166
Query: 367 RVLAGRSV-VDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNSMISKIVSM 425
R+L G + VD+S L+GESLPV K G V +G+ G + +TG ++ K +
Sbjct: 167 RLLEGDPLKVDQSALTGESLPVTKHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 226
Query: 426 VEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNP 485
V+ + Q++ AI + S+ Y I
Sbjct: 227 VDSTN-QVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYPI----------------QRRK 269
Query: 486 LLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLG----AKQGLLIRGGDVLERLARIDY 541
+ + +L+ P A+ PT + V ++G ++QG + + +E +A +D
Sbjct: 270 YRDGIDNLLVLLIGGIPIAM----PTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDV 325
Query: 542 LALDKTGTLTEGKPAV----FNVASFVYDESEILKIAAAVEKTATH-PIAKAIVNKAESL 596
L DKTGTLT K +V V ++ ++L AA + I A+V
Sbjct: 326 LCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFAAMASRVENQDAIDAAMVGMLADP 385
Query: 597 N-LTSPITRGQLAEPGF--------GILGEVDGRLVAV--GTLEWVYERFQKQGDHSDVQ 645
+ I + F + G V G E + E + + +
Sbjct: 386 KEARAGIRE--VHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA--SNDLSK 441
Query: 646 HLEHAVTHQSSE------LASPSNYSKSVVYVGREGEG---IIGAIAISDSLRHDAEHTV 696
+ + + +A +G + + D RHD+ T+
Sbjct: 442 KVLSIIDKYAERGLRSLAVA----RQVVPEKTKESPGAPWEFVGLLPLFDPPRHDSAETI 497
Query: 697 RSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS---------------------- 734
R G+ +++GD+ T + +G+G SS
Sbjct: 498 RRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEK 557
Query: 735 ------LTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTA 788
+ P+ K E++ LQ H V M GDG+NDAP+L AD+GIA+ +A + AA A
Sbjct: 558 ADGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVA-DATD-AARGA 615
Query: 789 ASIILLGNKLSQVVDALDLAKATMAKVYQNLSWAVAY-------NVVAIPIAAGALLPQY 841
+ I+L LS ++ A+ ++ ++Q + Y V + AL+ ++
Sbjct: 616 SDIVLTEPGLSVIISAVLTSR----AIFQRMKNYTIYAVSITIRIVFGFMLI--ALIWEF 669
Query: 842 DFA 844
DF+
Sbjct: 670 DFS 672
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 8e-38
Identities = 50/133 (37%), Positives = 83/133 (62%), Gaps = 9/133 (6%)
Query: 298 ARIRASSDMNELLSLVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVL 357
S + +L+SL +T++ +V S++ ++ +V + ++ GD + V+
Sbjct: 1 GSFTMSEALAKLISLQATEATIVTLDSDNILLSE---------EQVDVELVQRGDIIKVV 51
Query: 358 PGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTINWDGPLRIEACSTGSNS 417
PG PVDGRV+ G S+VDES+++GE++PV K+ G TV AG+IN +G L I A G+++
Sbjct: 52 PGGKFPVDGRVIEGHSMVDESLITGEAMPVAKKPGSTVIAGSINQNGSLLICATHVGADT 111
Query: 418 MISKIVSMVEEAQ 430
+S+IV +VEEAQ
Sbjct: 112 TLSQIVKLVEEAQ 124
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 1e-37
Identities = 45/91 (49%), Positives = 62/91 (68%)
Query: 341 VEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSVVDESMLSGESLPVFKEEGFTVSAGTI 400
+ VP +++ VGD V+V PGE IPVDG V+ G S VDESM+SGE +PV K +G V TI
Sbjct: 23 IAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATI 82
Query: 401 NWDGPLRIEACSTGSNSMISKIVSMVEEAQG 431
N G L+I A G +++++IV +VE+A G
Sbjct: 83 NNTGVLKIRATRVGGETLLAQIVKLVEDAMG 113
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* Length = 185 | Back alignment and structure |
|---|
Score = 80.5 bits (198), Expect = 2e-17
Identities = 37/179 (20%), Positives = 61/179 (34%), Gaps = 17/179 (9%)
Query: 549 TLTE-GKPAVFNVASFV----YDESEILKIAAAVEKTATHPIAKAIVNKA--ESLNLTSP 601
+ T G P V V +IL I E + HP+ AI E T
Sbjct: 1 SFTMHGTPVVNQVKVLTESNRISHHKILAIVGTAESNSEHPLGTAITKYCKQELDTETLG 60
Query: 602 ITRGQLAEPGFGILGEVDGRLVAVGTLEWVYER------FQKQGDHSDVQHLEHAVTHQS 655
PG GI +V + W E Q D S+ Q +
Sbjct: 61 TCIDFQVVPGCGISCKVTNIEGLLHKNNWNIEDNNIKNASLVQIDASNEQSSTSSSMIID 120
Query: 656 SELASPSNYSKSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDRE 714
+++++ N + V +G I + I++ D + ++KG +L++ D E
Sbjct: 121 AQISNALNAQQYKVLIGNREWMIRNGLVINN----DVNDFMTEHERKGRTAVLVAVDDE 175
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A Length = 165 | Back alignment and structure |
|---|
Score = 68.4 bits (167), Expect = 2e-13
Identities = 27/163 (16%), Positives = 46/163 (28%), Gaps = 30/163 (18%)
Query: 553 GKPAVFNVASFV----YDESEILKIAAAVEKTATHPIAKAIVNKA--ESLNLTSPITRGQ 606
P V V ++L + E ++ HP+ A+ E T
Sbjct: 4 MVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDF 63
Query: 607 LAEPGFGILGEVDGRLVAVGTLEWVYE-------RFQKQGDHSDVQHLEHAVTHQSSELA 659
A PG GI +V + E D +V + E
Sbjct: 64 QAVPGCGIGCKVSNVEGILAHSERPLSAPASHLNEAGSLPAEKDAVPQTFSVLIGNREWL 123
Query: 660 SPSNYS----------------KSVVYVGREGEGIIGAIAISD 686
+ + ++ + V +G + G IAI+D
Sbjct: 124 RRNGLTISSDVSDAMTDHEMKGQTAILVAIDGV-LCGMIAIAD 165
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 70.0 bits (172), Expect = 2e-12
Identities = 54/232 (23%), Positives = 88/232 (37%), Gaps = 42/232 (18%)
Query: 341 VEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV-VDESMLSGESLPVFKEEGFT----- 394
++ D + VGD V + G+ +P D R+L + VD S L+GES P + T
Sbjct: 188 FQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPL 247
Query: 395 -----VSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVY 449
T+ +G + +TG ++I +I S+ + + PI +
Sbjct: 248 ETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAG 307
Query: 450 SVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLAT 509
+ A F I G L ++ + ++V P L LAT
Sbjct: 308 LAILFGATFFIVAMCI-----------------GYTFLRAMVFFMAIVVAYVPEGL-LAT 349
Query: 510 PTAILVGTSLG----AKQGLLIRGGDVL---ERLARIDYLALDKTGTLTEGK 554
T L SL A + +++ L E L + DKTGTLT+ +
Sbjct: 350 VTVCL---SLTAKRLASKNCVVKN---LEAVETLGSTSVICSDKTGTLTQNR 395
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 5e-10
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 9/63 (14%)
Query: 736 TPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIE----AQENAASTAASI 791
+PQQK ++ + Q G VA+ GDG+ND+P+L AD+G+A+ I A+ AA +
Sbjct: 704 SPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKN-----AADM 758
Query: 792 ILL 794
ILL
Sbjct: 759 ILL 761
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 3e-12
Identities = 51/240 (21%), Positives = 86/240 (35%), Gaps = 58/240 (24%)
Query: 341 VEVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV-VDESMLSGESLPVFKEEGFT----- 394
+ + + GD V V G+ IP D R+++ VD S L+GES P + F+
Sbjct: 183 STINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPL 242
Query: 395 -----VSAGTINWDGPLRIEACSTGSNSMISKIVSMVEEAQGREAPIQRLADAIAGPFVY 449
T +G R TG +++ +I ++ + PI +
Sbjct: 243 ETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITG 302
Query: 450 SVMTLSAATFAFWYYIGSQIFPDVLLSDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLAT 509
+ L + F + G L ++ + ++V + P L LAT
Sbjct: 303 VAVFLGVSFFILSLIL-----------------GYSWLEAVIFLIGIIVANVPEGL-LAT 344
Query: 510 PTAILVGTSLG----AKQGLLIRGGDVLERLARIDYLA---L--------DKTGTLTEGK 554
T L +L A++ L++ L A L DKTGTLT+ +
Sbjct: 345 VTVCL---TLTAKRMARKNCLVK------NLE-----AVETLGSTSTICSDKTGTLTQNR 390
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 8e-10
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 9/63 (14%)
Query: 736 TPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIE----AQENAASTAASI 791
+PQQK ++ Q G VA+ GDG+ND+P+L AD+G+A+ I +++ AA +
Sbjct: 699 SPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQ-----AADM 753
Query: 792 ILL 794
ILL
Sbjct: 754 ILL 756
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 4e-12
Identities = 72/326 (22%), Positives = 117/326 (35%), Gaps = 58/326 (17%)
Query: 256 IVAFLISLVSLLKPELEWDASFFEEPVMLLGFVLL----GRSLEERARIRASSDMNELLS 311
++A IS V E E + F EP ++L ++ G E A A + L
Sbjct: 67 LLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAE-NA---IEALKE 122
Query: 312 LVSTQSRLVITSSESGSSADNVLCSDAICVEVPTDDIRVGDSVLVLPGETIPVDGRVLAG 371
+ V + + DI GD V V G+ +P D R+L+
Sbjct: 123 YEPEMGK-VYRADRK------------SVQRIKARDIVPGDIVEVAVGDKVPADIRILSI 169
Query: 372 RSV---VDESMLSGESLPVFKEEGFTVSAGTINWD-------------GPLRIEACSTGS 415
+S VD+S+L+GES+ V K +N D G +TG
Sbjct: 170 KSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGV 229
Query: 416 NSMISKIVSMVEEAQGREAPIQRLADAIAGPFVYSVMTLSAATFAFWYYIGSQIFPDVLL 475
++ I KI + + + P+Q+ D + + A + +
Sbjct: 230 STEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVH---- 285
Query: 476 SDMAGPNGNPLLLSLKLSVDVLVVSCPCALGLATPTAIL-VGTSLGAKQGLLIRGGDVLE 534
G + K++V + V + P L A T L +GT AK+ ++R
Sbjct: 286 ---GGSWIRGAIYYFKIAVALAVAAIPEGL-PAVITTCLALGTRRMAKKNAIVR------ 335
Query: 535 RLARIDYL------ALDKTGTLTEGK 554
L ++ L DKTGTLT +
Sbjct: 336 SLPSVETLGCTSVICSDKTGTLTTNQ 361
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 66.9 bits (164), Expect = 2e-11
Identities = 31/126 (24%), Positives = 58/126 (46%), Gaps = 29/126 (23%)
Query: 679 IGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI---GKEYINSSL 735
+G + + D R + +++ + GI+ ++++GD + A + +GI +E + +
Sbjct: 595 VGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAY 654
Query: 736 T--------------------------PQQKSEVISTLQTSGHHVAMVGDGINDAPSLAL 769
T P KS+++ LQ+ AM GDG+NDAP+L
Sbjct: 655 TGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKK 714
Query: 770 ADVGIA 775
A++GIA
Sbjct: 715 AEIGIA 720
|
| >2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana} Length = 95 | Back alignment and structure |
|---|
Score = 56.7 bits (137), Expect = 3e-10
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 11/104 (10%)
Query: 59 QNAPFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRT 118
QN E K + DV G+ C V ++++L + D V +V + + T + +
Sbjct: 3 QNKEEEKKKVKKLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDS 62
Query: 119 EAVEESEEVVNNVAESLGKRLMECGFEAKRRVSGTGVAENVKKW 162
+ + K L E EA RV+G KW
Sbjct: 63 LLIS---------PFQIAKALNEARLEANVRVNGE--TSFKNKW 95
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* Length = 156 | Back alignment and structure |
|---|
Score = 58.3 bits (141), Expect = 3e-10
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 27/153 (17%)
Query: 547 TGTLTEGKPAVFN--VASFV----YDESEILKIAAAVEKTATHPIAKAIVNKA-ESLNLT 599
+G N + F+ DE + A P ++IV A + NL
Sbjct: 14 SGHGGRH-----NRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLR 68
Query: 600 SPITRGQLAE--PGFGILG----EVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTH 653
+ A P +D R++ G+++ + + G H ++ V
Sbjct: 69 ERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFP-TDVDQKVDQ 127
Query: 654 QSSELASPSNYSKSVVYVGREGEGIIGAIAISD 686
+ + A+P + V ++G IA+ D
Sbjct: 128 VARQGATP-------LVVVEGSR-VLGVIALKD 152
|
| >2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A Length = 69 | Back alignment and structure |
|---|
Score = 53.8 bits (130), Expect = 1e-09
Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 9/76 (11%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
L V GM C CV V++ + D V +V VN+ V + V+
Sbjct: 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKV-------DVSFDADKVS--V 53
Query: 133 ESLGKRLMECGFEAKR 148
+ + + + G++ +
Sbjct: 54 KDIADAIEDQGYDVAK 69
|
| >2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis} Length = 71 | Back alignment and structure |
|---|
Score = 53.0 bits (128), Expect = 3e-09
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
+ L V GM CG CV ++S + + V+ V V + T V VV
Sbjct: 6 QLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTV-------EVTIDSSVVT--L 56
Query: 133 ESLGKRLMECGFEAK 147
+ + + + G++ +
Sbjct: 57 KDIVAVIEDQGYDVQ 71
|
| >2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149 | Back alignment and structure |
|---|
Score = 55.1 bits (133), Expect = 5e-09
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
L + GM C CV+ ++ L + V SV V ++ A IK E ++
Sbjct: 5 KCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQ---------P 55
Query: 133 ESLGKRLMECGFEAKRRVSGTGVAENV 159
+ + + + GFEA G N+
Sbjct: 56 LEIAQFIQDLGFEAAVMEDYAGSDGNI 82
|
| >2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} Length = 149 | Back alignment and structure |
|---|
Score = 53.1 bits (128), Expect = 2e-08
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 9/87 (10%)
Query: 61 APFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEA 120
A D + L ++GM C CV ++S LT + + +V + T A +K E
Sbjct: 69 AAVMEDYAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEI 128
Query: 121 VEESEEVVNNVAESLGKRLMECGFEAK 147
+ + K + E GF A
Sbjct: 129 IG---------PRDIIKIIEEIGFHAS 146
|
| >2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 56.2 bits (135), Expect = 5e-09
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
T+ L + GM C CV ++ + V S+ V++ +TA +K S +
Sbjct: 20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCT--SPVALQRA 77
Query: 132 AESLGKRLMECGFEAK 147
E+L F+
Sbjct: 78 IEALP----PGNFKVS 89
|
| >2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens} Length = 202 | Back alignment and structure |
|---|
Score = 51.6 bits (123), Expect = 2e-07
Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Query: 46 PAVSNSLETRTQPQNAPFELPKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAV 105
+ ++ + + +P + ST L+ ++GM C CV ++ +++ + V ++V
Sbjct: 96 GSGTDHRSSSSHSPGSPPRNQVQGTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISV 155
Query: 106 NMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAK 147
++ TA + + E L + + GFEA
Sbjct: 156 SLAEGTATVLYNPAVIS---------PEELRAAIEDMGFEAS 188
|
| >1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A Length = 77 | Back alignment and structure |
|---|
Score = 52.7 bits (127), Expect = 5e-09
Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
S + V+GM C CVA ++ L ++ + S+ V ++ A V + V+
Sbjct: 3 SKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKA-------EVRYNPAVIQ-- 53
Query: 132 AESLGKRLMECGFEAKRRVSGTG 154
+ + + E GF A + G
Sbjct: 54 PPMIAEFIRELGFGATVIENIEG 76
|
| >2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A Length = 90 | Back alignment and structure |
|---|
Score = 52.8 bits (127), Expect = 6e-09
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 71 DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNN 130
DST + GM C CV+ ++S L+A V S+ V++ +A + +V
Sbjct: 2 DSTATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVT-------- 53
Query: 131 VAESLGKRLMECGFEAKRRVSGTGVAENVKKWKE 164
ESL K + RVS T E + +
Sbjct: 54 -PESLRKAIEAVSPGLY-RVSITSEVEIEGRLEH 85
|
| >1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A Length = 72 | Back alignment and structure |
|---|
Score = 51.9 bits (125), Expect = 8e-09
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
TV L V GM C C VK ++ + V V V T A V + +
Sbjct: 4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQA-------VVTFDDAKTS--V 54
Query: 133 ESLGKRLMECGFEAK 147
+ L K + G+ +
Sbjct: 55 QKLTKATADAGYPSS 69
|
| >1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151 | Back alignment and structure |
|---|
Score = 54.0 bits (130), Expect = 1e-08
Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
+ + VSGM C C AR++ L V VN+ TET +
Sbjct: 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETG---------T 57
Query: 133 ESLGKRLMECGFEAKR 148
++ +++ + G+
Sbjct: 58 AAIQEKIEKLGYHVVT 73
|
| >1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A Length = 151 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 5e-07
Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
D+ GM C C R++ L + V + VN ET ++ +
Sbjct: 75 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEAS---------V 125
Query: 133 ESLGKRLMECGFEAK 147
L + + + G++ K
Sbjct: 126 SDLKEAVDKLGYKLK 140
|
| >3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A Length = 75 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-08
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIK 115
++V + V GM C CV ++ + + V + V++ + A I
Sbjct: 2 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATII 45
|
| >3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} Length = 74 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 2e-08
Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
+ + V+GM C C V++ L + V +V +L A + V+E +
Sbjct: 3 KIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEED------- 55
Query: 133 ESLGKRLMECGFEAK 147
+ + + + GFEA+
Sbjct: 56 --IKEEIEDAGFEAE 68
|
| >1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A Length = 72 | Back alignment and structure |
|---|
Score = 51.1 bits (123), Expect = 2e-08
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 9/75 (12%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
++++ GM C CV ++ V++ V S+ V++ VE + +
Sbjct: 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNG-------TVEYDPLLTS--P 54
Query: 133 ESLGKRLMECGFEAK 147
E+L + + GF+A
Sbjct: 55 ETLRGAIEDMGFDAT 69
|
| >1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A Length = 79 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 2e-08
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIK 115
++V + V GM C CV ++ + + V + V++ + A I
Sbjct: 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATII 51
|
| >1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A Length = 75 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 3e-08
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 71 DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNN 130
D + L V GM C CV +++S LT + +V + T A IK E +
Sbjct: 3 DGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIG-------- 54
Query: 131 VAESLGKRLMECGFEAK 147
+ + GFE
Sbjct: 55 -PRDIIHTIESLGFEPS 70
|
| >2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP} Length = 71 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 3e-08
Identities = 12/53 (22%), Positives = 20/53 (37%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESE 125
T + V GM C C + ++ L V +V + T + + V E
Sbjct: 4 TQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEIT 56
|
| >2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A Length = 69 | Back alignment and structure |
|---|
Score = 50.0 bits (120), Expect = 4e-08
Identities = 17/56 (30%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Query: 76 LDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLR--------TEAVEE 123
L ++GM C C A VK L V S V+ TA + + T AV
Sbjct: 4 LKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAG 59
|
| >1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B Length = 72 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 5e-08
Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 10/75 (13%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
V+L V GM C C + + L A V ++++T + E ++ + +
Sbjct: 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV--TADSIKEIIE 60
Query: 133 ESLGKRLMECGFEAK 147
+CGF+ +
Sbjct: 61 --------DCGFDCE 67
|
| >1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A Length = 84 | Back alignment and structure |
|---|
Score = 50.1 bits (120), Expect = 5e-08
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
+ + V GM C C + ++ + V + V++ + A I + +
Sbjct: 9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLIS--------- 59
Query: 132 AESLGKRLMECGFEAK 147
E + K++ GF A
Sbjct: 60 VEEMKKQIEAMGFPAF 75
|
| >2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66 | Back alignment and structure |
|---|
Score = 49.2 bits (118), Expect = 7e-08
Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Query: 76 LDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRT------EAVEE 123
L V GM C CV V L V+ V V++ A ++ +AVEE
Sbjct: 4 LKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEE 57
|
| >1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A Length = 76 | Back alignment and structure |
|---|
Score = 49.3 bits (118), Expect = 8e-08
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESE 125
+ + VSGM C C AR++ L V VN+ TET + +
Sbjct: 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAA 59
|
| >1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1 Length = 68 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-07
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Query: 76 LDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESL 135
V GM C CVAR++ + V V V + E A V+ E V A +
Sbjct: 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKA-------VVKFDEANVQ--ATEI 54
Query: 136 GKRLMECGFEAK 147
+ + E G++A+
Sbjct: 55 CQAINELGYQAE 66
|
| >1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 1e-07
Identities = 7/51 (13%), Positives = 22/51 (43%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEE 123
V + C CV +++ + + V + V++ ++ ++ A ++
Sbjct: 2 KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQD 52
|
| >1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A Length = 80 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 1e-07
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 70 VDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESE 125
V D+ GM C C R++ L + V + VN ET ++ + S+
Sbjct: 1 VTEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSD 56
|
| >2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A Length = 71 | Back alignment and structure |
|---|
Score = 48.1 bits (115), Expect = 2e-07
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEA 120
T+ L + GM C C + ++ + V S VN E A + E
Sbjct: 4 TINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGET 51
|
| >1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A Length = 73 | Back alignment and structure |
|---|
Score = 48.2 bits (115), Expect = 2e-07
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVV 128
+ VSGM C C +V++ + V+ V V TE + + + E +
Sbjct: 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAL 59
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 6e-07
Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 19/119 (15%)
Query: 676 EGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK------E 729
+ + S L A V +L++K K + SG + A + +
Sbjct: 64 LKLAKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLI 123
Query: 730 YINSSLT---------PQQKSEVISTLQT----SGHHVAMVGDGINDAPSLALADVGIA 775
N +L K E++ LQ S + +VGDG ND A + IA
Sbjct: 124 VENDALNGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIA 182
|
| >2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 1e-06
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Query: 66 PKRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESE 125
+ + V M CG C +K + +V + + T + V ++
Sbjct: 16 NLYFQGAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVV----GGVSDAA 71
Query: 126 EVVNNVAE 133
+ +
Sbjct: 72 HIAEIITA 79
|
| >2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 3e-06
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAI 114
T+ L V + C C V + +D +V V++ ++ I
Sbjct: 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTI 43
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 6e-06
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 24/123 (19%)
Query: 676 EGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINS-- 733
E I + +R V + + I ++SG + V + + + K+ I
Sbjct: 66 EEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGI-VEKDRIYCNH 124
Query: 734 --------SLTPQQ-------------KSEVISTLQTSGHHVAMVGDGINDAPSLALADV 772
+ K VI L ++ M+GD + D + L+D+
Sbjct: 125 ASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL 184
Query: 773 GIA 775
A
Sbjct: 185 CFA 187
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 47.3 bits (113), Expect = 6e-06
Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 23/136 (16%)
Query: 692 AEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYI---------NSSLT------ 736
V LQ++ ++ L+SG V A ++ I + N
Sbjct: 91 IRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQ 150
Query: 737 ----PQQKSEVISTL--QTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAAS 790
K +VI L + + M+GDG D + AD I +
Sbjct: 151 PTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG--GNVIRQQVKDN 208
Query: 791 IILLGNKLSQVVDALD 806
+++ L+
Sbjct: 209 AKWYITDFVELLGELE 224
|
| >3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus} Length = 73 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 7e-06
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEE 123
++L++SG+ C CVARVK L V+ A + E V++
Sbjct: 6 KIVLELSGLSCHHCVARVKKALEEAG-AKVEKVD--LNEAVVAGNKEDVDK 53
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 7e-06
Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 19/119 (15%)
Query: 676 EGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK------E 729
+ ++ A+ +L + ++ KG KT ++SG + + E
Sbjct: 168 KAVLNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVE 227
Query: 730 YINSSLT---------PQQKSEVISTLQT----SGHHVAMVGDGINDAPSLALADVGIA 775
++ LT K + + L + ++ GDG ND P L A GIA
Sbjct: 228 IRDNVLTDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIA 286
|
| >2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima} Length = 67 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 9e-06
Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 14/75 (18%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
+L V + C C R+ L V + V++ + + E+E +
Sbjct: 2 RYVLYVPDISCNHCKMRISKALEELG-VKNYEVSVEEKKVVV--------ETENL----- 47
Query: 133 ESLGKRLMECGFEAK 147
+S+ K+L E + +
Sbjct: 48 DSVLKKLEEIDYPVE 62
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 47.0 bits (112), Expect = 1e-05
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 19/103 (18%)
Query: 692 AEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK------EYINSSLT--------- 736
V +L G K + SG +++ + E ++ LT
Sbjct: 183 LPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEIVSGKLTGQVLGEVVS 242
Query: 737 PQQKSEVISTLQT----SGHHVAMVGDGINDAPSLALADVGIA 775
Q K++++ TL H+ VGDG ND +A A +G+A
Sbjct: 243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVA 285
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* Length = 164 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 2e-05
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
+ KGI +L+G++ E V A+++ + + E+ + L + VA
Sbjct: 40 IFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQGVVDKLSAAEELCNELGINLEQVA 99
Query: 756 MVGDGINDAPSLALADVGIA 775
+GD +NDA L +
Sbjct: 100 YIGDDLNDAKLLKRVGIAGV 119
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 47.5 bits (112), Expect = 2e-05
Identities = 78/485 (16%), Positives = 137/485 (28%), Gaps = 175/485 (36%)
Query: 414 GSNSMISKI-VSMVEEAQGREAPIQRLADAI------AGPFVY-------SVMTLSAA-- 457
N + +K VS R P +L A+ + + + L
Sbjct: 121 NDNQVFAKYNVS-------RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173
Query: 458 -----TFA---FWYYIGSQIFPDVLLSDM------AGPNGNPL----------------- 486
FW + + P+ +L + PN
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE 233
Query: 487 ---LLSLKLSVDVLVV---------------SCPCALGLATPTAILVGTSLGAKQGLLIR 528
LL K + L+V SC IL+ T R
Sbjct: 234 LRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCK----------ILLTT----------R 273
Query: 529 GGDVLERLARIDYLALDKTGTLTEGKPAVFNVASFVYDESEILKIAAAVEKTATHPIAKA 588
V D+L+ T ++ + + DE + L + K
Sbjct: 274 FKQV------TDFLSAATTTHISL----DHHSMTLTPDEVKSL-------------LLKY 310
Query: 589 IVNKAESL----NLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERFQKQGDHSDV 644
+ + + L T+P I+ E + G W + ++ H +
Sbjct: 311 LDCRPQDLPREVLTTNP-----RR---LSIIAE----SIRDGLATW--DNWK----HVNC 352
Query: 645 QHLEHAVTHQSS-ELASPSNYSKSVVY----VGREGEGI-IGAIAI--SDSLRHDAEHTV 696
L + +SS + P+ Y K ++ V I +++ D ++ D V
Sbjct: 353 DKLTTII--ESSLNVLEPAEYRK--MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVV 408
Query: 697 -----RSLQQKGIKT---------LLLSGDREEAVAATAKEVG---IGKEYINSSLTPQQ 739
SL +K K L L E A V I K + + L P
Sbjct: 409 NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPY 468
Query: 740 KSEVISTLQTSGHHVAMV--GDGINDAPSLALADVG-IALQIEAQENAASTAASIILLGN 796
+ GHH+ + + + + L D + +I A + + SI+ N
Sbjct: 469 LDQYF--YSHIGHHLKNIEHPERMTLFRMVFL-DFRFLEQKIRHDSTAWNASGSIL---N 522
Query: 797 KLSQV 801
L Q+
Sbjct: 523 TLQQL 527
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.0 bits (108), Expect = 5e-05
Identities = 55/354 (15%), Positives = 93/354 (26%), Gaps = 95/354 (26%)
Query: 33 IASRPKRRRRRRVPAVSNSLETRTQPQNAPFELPKRRVDS--------TVLLD------- 77
+ S K +R+ +E R + N K V LL+
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153
Query: 78 -VSGMMCGGCVARVKSVLTADD-RVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESL 135
+ G+ G K+ + D V M + + L+ E V+ + + L
Sbjct: 154 LIDGV--LGS---GKTWVALDVCLSYKVQCKMDFKIFWLNLKN--CNSPETVLEML-QKL 205
Query: 136 GKRLMECGFEAKRRVSGTGVAENVKKWKELAKKR-EDLLVKSRNRVAL--------AWTL 186
++ S + + N+K + LL L A
Sbjct: 206 LYQID------PNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAW 259
Query: 187 VA--LCC--------GSHASHILHSLGIHIAHGPLWELLDNSYVKGGFA--LGALFG--P 232
A L C + + HI+ L VK L P
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319
Query: 233 GRASLMAFRKGSPNMNSLVG--------------------FGSIVAFLISLVSLLKPELE 272
+P S++ +I+ SL L E
Sbjct: 320 REV-----LTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIE--SSLNVLEPAEYR 372
Query: 273 ---WDASFFEE----PVMLLGFVLLGRSLEERARIRASSDMNEL--LSLVSTQS 317
S F P +LL ++ ++ + +N+L SLV Q
Sbjct: 373 KMFDRLSVFPPSAHIPTILLS-LIWFDVIKSDVMV----VVNKLHKYSLVEKQP 421
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 19/103 (18%)
Query: 692 AEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK------EYINSSLT--------- 736
AE T++ L+ +G ++SG + AV +++G+ + LT
Sbjct: 81 AEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLK 140
Query: 737 PQQKSEVISTLQT----SGHHVAMVGDGINDAPSLALADVGIA 775
K E++ + + VGDG ND A + IA
Sbjct: 141 ENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA 183
|
| >2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A Length = 71 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 4e-05
Identities = 9/59 (15%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 70 VDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVV 128
+ + V G+ C C A+ + + + V VN + ++++ E+
Sbjct: 1 MAEKTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTG-EASIQQVEQAG 58
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 46.0 bits (109), Expect = 4e-05
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 19/119 (15%)
Query: 676 EGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK------E 729
+I +A L A T+R+L++ G ++SG + A+E+ + E
Sbjct: 245 ATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELE 304
Query: 730 YINSSLT---------PQQKSEVISTLQT----SGHHVAMVGDGINDAPSLALADVGIA 775
++ +LT K+ + VGDG ND LA A +GIA
Sbjct: 305 IVDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIA 363
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A Length = 189 | Back alignment and structure |
|---|
Score = 44.1 bits (105), Expect = 4e-05
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
++ L G+ T ++SG + V AK +GI + ++++ LQ VA
Sbjct: 55 IKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGREDKLVVLDKLLAELQLGYEQVA 114
Query: 756 MVGDGINDAPSLALADVGIA 775
+GD + D P + VG+
Sbjct: 115 YLGDDLPDLP--VIRRVGLG 132
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* Length = 180 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 5e-05
Identities = 14/80 (17%), Positives = 29/80 (36%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
++ L I+ +LSG + ++GI ++ +++ + A
Sbjct: 44 IKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLGKLEKETACFDLMKQAGVTAEQTA 103
Query: 756 MVGDGINDAPSLALADVGIA 775
+GD D P+ A A
Sbjct: 104 YIGDDSVDLPAFAACGTSFA 123
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} Length = 211 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 8e-05
Identities = 22/80 (27%), Positives = 37/80 (46%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
+R L I +++G R + + A +GI Y S E+++TLQ VA
Sbjct: 85 IRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQSDKLVAYHELLATLQCQPEQVA 144
Query: 756 MVGDGINDAPSLALADVGIA 775
+GD + D P +A + +A
Sbjct: 145 YIGDDLIDWPVMAQVGLSVA 164
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} Length = 162 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 8e-05
Identities = 16/80 (20%), Positives = 32/80 (40%), Gaps = 2/80 (2%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
++ LQ+ GI ++SG + KE+G+ + Y S + ++ +
Sbjct: 45 IKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTGSYKKLEIYEKIKEKYSLKDEEIG 104
Query: 756 MVGDGINDAPSLALADVGIA 775
+GD + D + VG
Sbjct: 105 FIGDDVVDIE--VMKKVGFP 122
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} Length = 191 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 16/80 (20%), Positives = 33/80 (41%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
++ L GI+ +++ + V +++GI Y + TL + A
Sbjct: 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQVDKRSAYQHLKKTLGLNDDEFA 114
Query: 756 MVGDGINDAPSLALADVGIA 775
+GD + D P + +G+A
Sbjct: 115 YIGDDLPDLPLIQQVGLGVA 134
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* Length = 188 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 1e-04
Identities = 18/80 (22%), Positives = 35/80 (43%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
+R I+ +++G + + V +GI Y S S+++ L + +VA
Sbjct: 62 IRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNKLIAFSDLLEKLAIAPENVA 121
Query: 756 MVGDGINDAPSLALADVGIA 775
VGD + D P + + +A
Sbjct: 122 YVGDDLIDWPVMEKVGLSVA 141
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} Length = 168 | Back alignment and structure |
|---|
Score = 42.8 bits (102), Expect = 1e-04
Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
+ L++ GI+ L+S +A ++ K ++ S E + VA
Sbjct: 45 ISLLKKSGIEVRLISERACSKQTLSALKLDC-KTEVSVSDKLATVDEWRKEMGLCWKEVA 103
Query: 756 MVGDGINDAPSLALADVGIA 775
+G+ ++D L +
Sbjct: 104 YLGNEVSDEECLKRVGLSAV 123
|
| >2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98 | Back alignment and structure |
|---|
Score = 41.0 bits (96), Expect = 1e-04
Identities = 20/94 (21%), Positives = 32/94 (34%), Gaps = 13/94 (13%)
Query: 67 KRRVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEE 126
+ T+ V M C CV V+ L V V V++ + + S+E
Sbjct: 14 NQGTLCTLEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLV----HTTLPSQE 68
Query: 127 VVNNVAESLGKRLMECGFEAKRRVSGTGVAENVK 160
V L G +A + G+G +N
Sbjct: 69 VQ--------ALLEGTGRQAVLKGMGSGQLQNSG 94
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} Length = 195 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 1e-04
Identities = 17/80 (21%), Positives = 33/80 (41%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVA 755
V++L GI+ +++G R + V K +GI Y Q ++ L +
Sbjct: 61 VKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQGQDDKVQAYYDICQKLAIAPEQTG 120
Query: 756 MVGDGINDAPSLALADVGIA 775
+GD + D P + + +
Sbjct: 121 YIGDDLIDWPVMEKVALRVC 140
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} Length = 176 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 2e-04
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 696 VRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQT----SG 751
+ +L++ G+ L+LS ++ VAA A+++ I +K + +
Sbjct: 48 IAALRKSGLTMLILSTEQNPVVAARARKLKI-PVLHGID----RKDLALKQWCEEQGIAP 102
Query: 752 HHVAMVGDGINDAPSLALADVGIA 775
V VG+ +ND P A VG
Sbjct: 103 ERVLYVGNDVNDLP--CFALVGWP 124
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 883 | ||||
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 7e-20 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 9e-19 | |
| d2b8ea2 | 113 | d.220.1.1 (A:435-547) Cation-transporting ATPase { | 5e-12 | |
| d1osda_ | 72 | d.58.17.1 (A:) Mercuric ion binding protein MerP { | 2e-11 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 2e-11 | |
| d2qifa1 | 69 | d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt | 7e-11 | |
| d2a29a1 | 136 | d.220.1.1 (A:316-451) Potassium-transporting ATPas | 2e-10 | |
| d1kvja_ | 79 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 2e-10 | |
| d2aw0a_ | 72 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 3e-10 | |
| d2ggpb1 | 72 | d.58.17.1 (B:1-72) Copper transporter domain ccc2a | 7e-10 | |
| d1mwza_ | 73 | d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, | 7e-10 | |
| d1p6ta1 | 72 | d.58.17.1 (A:1-72) Potential copper-translocating | 8e-10 | |
| d1q8la_ | 84 | d.58.17.1 (A:) Menkes copper-transporting ATPase { | 2e-09 | |
| d1cpza_ | 68 | d.58.17.1 (A:) Copper chaperone {Enterococcus hira | 9e-09 | |
| d1p6ta2 | 79 | d.58.17.1 (A:73-151) Potential copper-translocatin | 1e-08 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 1e-08 | |
| d1sb6a_ | 64 | d.58.17.1 (A:) Copper chaperone {Synechocystis sp. | 7e-06 | |
| d1qupa2 | 72 | d.58.17.1 (A:2-73) Copper chaperone for superoxide | 9e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 3e-05 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 2e-04 | |
| d1k1ea_ | 177 | c.108.1.5 (A:) Probable phosphatase YrbI {Haemophi | 3e-04 | |
| d1cc8a_ | 72 | d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX | 4e-04 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 0.004 |
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 84.4 bits (208), Expect = 7e-20
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 666 KSVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVG 725
+ V V + G D+L+ A+ V+ L++ GIK +++GD + A ++E+
Sbjct: 1 EKVTAVIFDKTGT-LTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELN 59
Query: 726 IGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAA 785
+ P QKSE + LQ + VA VGDGINDAP+LA AD+GIA + + + A
Sbjct: 60 LDLVIAEV--LPHQKSEEVKKLQ-AKEVVAFVGDGINDAPALAQADLGIA--VGSGSDVA 114
Query: 786 STAASIILLGNKLSQVVDAL 805
+ I+L+ + L VV A+
Sbjct: 115 VESGDIVLIRDDLRDVVAAI 134
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 82.1 bits (202), Expect = 9e-19
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 34/169 (20%)
Query: 667 SVVYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI 726
SV+ + G + D R + +++ + GI+ ++++GD + A + +GI
Sbjct: 3 SVICSDKTGTLTTNQL---DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGI 59
Query: 727 GKE-----------------------------YINSSLTPQQKSEVISTLQTSGHHVAMV 757
E + + P KS+++ LQ+ AM
Sbjct: 60 FGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMT 119
Query: 758 GDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806
GDG+NDAP+L A++GIA + + A TA+ ++L + S +V A++
Sbjct: 120 GDGVNDAPALKKAEIGIA--MGSGTAVAKTASEMVLADDNFSTIVAAVE 166
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 113 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 61.3 bits (148), Expect = 5e-12
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 557 VFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILG 616
V ++ DE E+L++AA E+ + HPIA+AIV KA + G G++
Sbjct: 2 VTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVA 61
Query: 617 EVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGE 676
+ + VG +R + + +E A+ E +K+ V V R G
Sbjct: 62 DG----ILVGN-----KRLMEDFGVAVSNEVELALEKLERE-------AKTAVIVARNGR 105
Query: 677 GIIGAIAIS 685
+ G IA+S
Sbjct: 106 -VEGIIAVS 113
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Score = 58.2 bits (141), Expect = 2e-11
Identities = 18/77 (23%), Positives = 27/77 (35%), Gaps = 9/77 (11%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
TV L V GM C C VK ++ + V V V T A + +
Sbjct: 4 TVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQK------- 56
Query: 133 ESLGKRLMECGFEAKRR 149
L K + G+ + +
Sbjct: 57 --LTKATADAGYPSSVK 71
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.7 bits (144), Expect = 2e-11
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 16/101 (15%)
Query: 342 EVPTDDIRVGDSVLVLPGETIPVDGRVLAGRSV---VDESMLSGESLPVFKEEGFT---- 394
+ DI GD V V G+ +P D R+L+ +S VD+S+L+GES+ V K
Sbjct: 15 RIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPR 74
Query: 395 ---------VSAGTINWDGPLRIEACSTGSNSMISKIVSMV 426
+ +GT G +TG ++ I KI +
Sbjct: 75 AVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Score = 56.3 bits (136), Expect = 7e-11
Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 9/76 (11%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
L V GM C CV V++ + D V +V VN+ + + V +
Sbjct: 3 QKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKD------- 55
Query: 133 ESLGKRLMECGFEAKR 148
+ + + G++ +
Sbjct: 56 --IADAIEDQGYDVAK 69
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} Length = 136 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Score = 57.4 bits (138), Expect = 2e-10
Identities = 18/132 (13%), Positives = 41/132 (31%), Gaps = 16/132 (12%)
Query: 565 YDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGF-------GILGE 617
DE + A P ++IV A+ L
Sbjct: 13 VDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGIN 72
Query: 618 VDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEG 677
+D R++ G+++ + + G ++ V + + + + V
Sbjct: 73 IDNRMIRKGSVDAIRRHVEANG-GHFPTDVDQKVDQVARQ-------GATPLVVVEGSR- 123
Query: 678 IIGAIAISDSLR 689
++G IA+ D ++
Sbjct: 124 VLGVIALKDIVK 135
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.2 bits (133), Expect = 2e-10
Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
++V + V GM C CV ++ + + V + V++ + A I +
Sbjct: 8 NSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKT------ 61
Query: 132 AESLGKRLMECGFEAK 147
L + + + GF+A
Sbjct: 62 ---LQEAIDDMGFDAV 74
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (131), Expect = 3e-10
Identities = 13/75 (17%), Positives = 29/75 (38%), Gaps = 9/75 (12%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
++++ GM C CV ++ V++ V S+ V++ ++
Sbjct: 4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPET------- 56
Query: 133 ESLGKRLMECGFEAK 147
L + + GF+A
Sbjct: 57 --LRGAIEDMGFDAT 69
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.6 bits (129), Expect = 7e-10
Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
V+L V GM C C + + L A V ++++T + E A
Sbjct: 3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV----------TA 52
Query: 133 ESLGKRLMECGFEAK 147
+S+ + + +CGF+ +
Sbjct: 53 DSIKEIIEDCGFDCE 67
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Score = 53.7 bits (129), Expect = 7e-10
Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 11/76 (14%)
Query: 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
+ VSGM C C +V++ + V+ V V TE + + + E +
Sbjct: 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ-- 60
Query: 132 AESLGKRLMECGFEAK 147
+ G+ +
Sbjct: 61 ---------KAGYSLR 67
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Score = 53.6 bits (129), Expect = 8e-10
Identities = 15/53 (28%), Positives = 22/53 (41%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESE 125
+ + VSGM C C AR++ L V VN+ TET + +
Sbjct: 7 EIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAA 59
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 84 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.7 bits (126), Expect = 2e-09
Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 9/77 (11%)
Query: 71 DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNN 130
+ + + V GM C C + ++ + V + V++ + A I + + E
Sbjct: 8 EVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEE----- 62
Query: 131 VAESLGKRLMECGFEAK 147
+ K++ GF A
Sbjct: 63 ----MKKQIEAMGFPAF 75
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Score = 50.5 bits (121), Expect = 9e-09
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 76 LDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESL 135
V GM C CVAR++ + V V V + E A +K V+ +E +
Sbjct: 4 FSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATE---------I 54
Query: 136 GKRLMECGFEAK 147
+ + E G++A+
Sbjct: 55 CQAINELGYQAE 66
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Score = 50.7 bits (121), Expect = 1e-08
Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 9/75 (12%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
D+ GM C C R++ L + V + VN ET ++ + S+
Sbjct: 3 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSD------- 55
Query: 133 ESLGKRLMECGFEAK 147
L + + + G++ K
Sbjct: 56 --LKEAVDKLGYKLK 68
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 54.2 bits (129), Expect = 1e-08
Identities = 29/228 (12%), Positives = 64/228 (28%), Gaps = 33/228 (14%)
Query: 614 ILGEVDGRLVAVGTLEWVYERFQKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGR 673
I+ + DG + + + + F L+ V ++ + +
Sbjct: 7 IICDFDGTITMNDNIINIMKTFAPPE----WMALKDGVLSKTLSIK-EGVGRMFGLLPSS 61
Query: 674 EGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINS 733
E I + +R V + + I ++SG + V + + +
Sbjct: 62 LKEEITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCN 121
Query: 734 SL----------------------TPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD 771
K VI L ++ M+GD + D + L+D
Sbjct: 122 HASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSD 181
Query: 772 VGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAKATMAKVYQNL 819
+ A E L ++ ++ + +V + L
Sbjct: 182 LCFARDYLLNE--CREQNLNHLPYQDFYEIRKEIE----NVKEVQEWL 223
|
| >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]
Score = 42.2 bits (99), Expect = 7e-06
Identities = 14/75 (18%), Positives = 25/75 (33%), Gaps = 12/75 (16%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVA 132
T+ L V + C C V + +D +V V++ ++ I
Sbjct: 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALG------------E 49
Query: 133 ESLGKRLMECGFEAK 147
E L + G E +
Sbjct: 50 EQLRTAIASAGHEVE 64
|
| >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone for superoxide dismutase, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 42.1 bits (99), Expect = 9e-06
Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 12/67 (17%)
Query: 80 GMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRL 139
M C CV +K+ L ++S+ ++ + +++ ++ L
Sbjct: 13 PMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVA------------PSTIINTL 60
Query: 140 MECGFEA 146
CG +A
Sbjct: 61 RNCGKDA 67
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 44.1 bits (103), Expect = 2e-05
Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Query: 747 LQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806
++ + V GD ND L+ A GI A EN + + L
Sbjct: 141 FKSLYYRVIAAGDSYNDTTMLSEAHAGIL--FHAPENVIREFPQFPAVHTYEDLKREFLK 198
Query: 807 LAKATMA 813
+ +++
Sbjct: 199 ASSRSLS 205
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.8 bits (102), Expect = 3e-05
Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 27/135 (20%)
Query: 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVG-------------------IGK 728
L V LQ++ ++ L+SG V A ++ G
Sbjct: 83 LTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGF 142
Query: 729 EYINSSLTPQQKSEVISTLQTSGHH--VAMVGDGINDAPSLALADVGIALQ-IEAQENAA 785
+ + K +VI L+ H + M+GDG D + AD I ++
Sbjct: 143 DETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVK 202
Query: 786 STAASII-----LLG 795
A I LLG
Sbjct: 203 DNAKWYITDFVELLG 217
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 42.1 bits (98), Expect = 2e-04
Identities = 17/160 (10%), Positives = 42/160 (26%), Gaps = 44/160 (27%)
Query: 689 RHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGI-----------GKEYINSSL-- 735
+ + + L+ G + + +G + +G+ + + +
Sbjct: 217 VDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMY 276
Query: 736 -----------------------TPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD- 771
+ + V +VGD + D S
Sbjct: 277 PQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGA 336
Query: 772 --VGIALQI---EAQENAASTAASIILLGNKLSQVVDALD 806
+G + +A + A ++ N L ++ LD
Sbjct: 337 TFIGTLTGLKGKDAAGELEAHHADYVI--NHLGELRGVLD 374
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Score = 40.4 bits (94), Expect = 3e-04
Identities = 19/107 (17%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 669 VYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK 728
++ GE I + + D L ++ L I+ +LSG + ++GI
Sbjct: 21 LHYDANGE-AIKSFHVRDGLG------IKMLMDADIQVAVLSGRDSPILRRRIADLGIKL 73
Query: 729 EYINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIA 775
++ +++ + A +GD D P+ A A
Sbjct: 74 FFLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFA 120
|
| >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 37.4 bits (87), Expect = 4e-04
Identities = 12/76 (15%), Positives = 27/76 (35%), Gaps = 14/76 (18%)
Query: 73 TVLLDVSGMMCGGCVARVKSVLTA-DDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNV 131
+V M C GC V VLT + V + +++ + +
Sbjct: 5 HYQFNV-VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLP------------ 51
Query: 132 AESLGKRLMECGFEAK 147
+ + +++ + G E +
Sbjct: 52 YDFILEKIKKTGKEVR 67
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 37.5 bits (85), Expect = 0.004
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 737 PQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGN 796
+ ++ + VGDG ND A + IA A+ A I +
Sbjct: 144 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIA--FCAKPILKE-KADICIEKR 200
Query: 797 KLSQVVDAL 805
L +++ +
Sbjct: 201 DLREILKYI 209
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 883 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.93 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.9 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.75 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.48 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.14 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.11 | |
| d2aw0a_ | 72 | Menkes copper-transporting ATPase {Human (Homo sap | 99.09 | |
| d1osda_ | 72 | Mercuric ion binding protein MerP {Ralstonia metal | 99.08 | |
| d1q8la_ | 84 | Menkes copper-transporting ATPase {Human (Homo sap | 99.08 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.07 | |
| d1kvja_ | 79 | Menkes copper-transporting ATPase {Human (Homo sap | 99.06 | |
| d2ggpb1 | 72 | Copper transporter domain ccc2a {Baker's yeast (Sa | 99.05 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.05 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.03 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.03 | |
| d1p6ta2 | 79 | Potential copper-translocating P-type ATPase CopA | 99.02 | |
| d1cpza_ | 68 | Copper chaperone {Enterococcus hirae [TaxId: 1354] | 99.01 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.99 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.99 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 98.97 | |
| d2qifa1 | 69 | Copper chaperone {Bacillus subtilis, CopZ [TaxId: | 98.97 | |
| d1p6ta1 | 72 | Potential copper-translocating P-type ATPase CopA | 98.96 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.95 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.86 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.84 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.82 | |
| d1mwza_ | 73 | Metal ion-transporting ATPase ZntA, N-terminal dom | 98.81 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.77 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.75 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.69 | |
| d1qupa2 | 72 | Copper chaperone for superoxide dismutase, N-termi | 98.66 | |
| d1sb6a_ | 64 | Copper chaperone {Synechocystis sp. pcc 6803, Scat | 98.62 | |
| d1cc8a_ | 72 | ATX1 metallochaperone protein (ATOX1) {Baker's yea | 98.53 | |
| d1fe0a_ | 66 | ATX1 metallochaperone protein (ATOX1) {Human (Homo | 98.52 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.47 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.46 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.36 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.85 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 97.84 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 97.83 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.81 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.76 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.64 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 97.59 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.57 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.56 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.53 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.11 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 97.01 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 96.93 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.93 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.73 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.66 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.65 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.49 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 96.49 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.39 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.99 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.89 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.68 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.66 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.5 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.46 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.96 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.91 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 94.85 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 94.8 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 94.27 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.2 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.18 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 92.7 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 86.61 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=4.3e-25 Score=201.09 Aligned_cols=121 Identities=29% Similarity=0.523 Sum_probs=116.8
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC-----------------------------CEEEEECC
Q ss_conf 8798649999999977997999993996999999999909998-----------------------------64998039
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK-----------------------------EYINSSLT 736 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~-----------------------------~~v~~~~~ 736 (883)
||+|++++++|+.||++||+++|+|||+..++..+|+++||.. ..+|++++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 88965399999999988498999899997999999998499887641110003463000012788766553223000001
Q ss_pred CCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHHHH
Q ss_conf 001599999984469938999489369998871993599614972288985357999479933699999999
Q 002770 737 PQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLA 808 (883)
Q Consensus 737 p~~K~~~i~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~~~ 808 (883)
|+||..+++.||+.|+.|+|+|||.||+|||++|||||++ +++++.++++||+++++++|+.++++|+||
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~--~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM--GSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE--TTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCEEEEE--CCCCHHHHHHCCEEECCCCHHHHHHHHHCC
T ss_conf 1478889999874045404770677888999859888886--551199998489999159989999999749
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.90 E-value=7.3e-24 Score=191.92 Aligned_cols=131 Identities=34% Similarity=0.507 Sum_probs=120.6
Q ss_pred EEEECCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHH
Q ss_conf 99965955899999358798649999999977997999993996999999999909998649980390015999999844
Q 002770 670 YVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQT 749 (883)
Q Consensus 670 ~~a~~~~~~iG~i~l~D~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~i~~l~~ 749 (883)
++..|+. ..+.++++|++|++++++|+.|+++|++++|+|||+..++.++|+++||+ .++++++|++|..+++.+|+
T Consensus 5 ~~~~d~~-~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~--~v~~~~~p~~k~~~v~~~q~ 81 (135)
T d2b8ea1 5 AVIFDKT-GTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD--LVIAEVLPHQKSEEVKKLQA 81 (135)
T ss_dssp EEEEECC-CCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--EEECSCCHHHHHHHHHHHTT
T ss_pred EEEECCC-EEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHHC
T ss_conf 9999891-47997368899811999999999859979997586335556777654222--10121102679999999985
Q ss_pred CCCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf 699389994893699988719935996149722889853579994799336999999
Q 002770 750 SGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 750 ~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
. +.|+|+|||.||+|||++||+||++ +++++.++++||++++++++..|+.+|+
T Consensus 82 ~-~~v~~vGDg~nD~~aL~~Advgia~--~~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 82 K-EVVAFVGDGINDAPALAQADLGIAV--GSGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp T-SCEEEEECSSSSHHHHHHSSEEEEE--CCC--------SEEESSCCTHHHHHHHC
T ss_pred C-CEEEEEECCCCCHHHHHHCCEEEEC--CCCCHHHHHHCCEEEECCCHHHHHHHHC
T ss_conf 9-9789996787757889747862453--7658789984999997899889999859
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.75 E-value=1.2e-18 Score=153.02 Aligned_cols=90 Identities=31% Similarity=0.357 Sum_probs=81.1
Q ss_pred CCE--EEEEECCCCCCCCEEEECCCCEEEEEEEEEEEC---EEEEECCCCCCCCEEECCCC-------------CCCCCC
Q ss_conf 996--999608986789999977998542118999410---17760244687840531489-------------800243
Q 002770 337 DAI--CVEVPTDDIRVGDSVLVLPGETIPVDGRVLAGR---SVVDESMLSGESLPVFKEEG-------------FTVSAG 398 (883)
Q Consensus 337 dg~--~~~v~~~~l~~GDii~i~~Ge~IPaDg~vi~G~---~~Vdes~LTGEs~pv~K~~g-------------~~v~aG 398 (883)
+|+ .++|++++|+|||+|.|++|++|||||+|++++ +.||||+|||||.|+.|.++ +.+|+|
T Consensus 8 ~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~n~lf~G 87 (115)
T d1wpga1 8 ADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSG 87 (115)
T ss_dssp SSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCTTEECTT
T ss_pred CCCCEEEEEEHHHCCCCCEEEECCCCEEEECEEEEEEECCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCEEEEC
T ss_conf 99845999869998899899999999995156999961262689872000346898741366226543443333447741
Q ss_pred EEEECCCEEEEEEEECCCCCHHHHHHHH
Q ss_conf 0120486999998625753012446555
Q 002770 399 TINWDGPLRIEACSTGSNSMISKIVSMV 426 (883)
Q Consensus 399 t~v~~G~~~~~v~~~g~~T~~~~i~~~v 426 (883)
|.+.+|.++++|++||.+|.+++|.+++
T Consensus 88 T~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 88 TNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp CEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred CEEEEEEEEEEEEEECCCCHHHHHHHHC
T ss_conf 6898456999999996003889999759
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.48 E-value=8.1e-15 Score=124.38 Aligned_cols=126 Identities=17% Similarity=0.211 Sum_probs=103.9
Q ss_pred EEEEEEECCCCC--HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC----C----------------------
Q ss_conf 899999358798--649999999977997999993996999999999909998----6----------------------
Q 002770 678 IIGAIAISDSLR--HDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK----E---------------------- 729 (883)
Q Consensus 678 ~iG~i~l~D~lr--~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~----~---------------------- 729 (883)
..|++..++++| ++++++++.|+++|+++.|+|||+..++..+++++|+.. .
T Consensus 204 ~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~ 283 (380)
T d1qyia_ 204 KTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLG 283 (380)
T ss_dssp CCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCC
T ss_pred HCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCC
T ss_conf 54230135653343639999999998799599988997999999999819953478505874413331122033110236
Q ss_pred ----------EEEEECCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCC---EEEEEECCCCCHHH----HHHCCEE
Q ss_conf ----------499803900159999998446993899948936999887199---35996149722889----8535799
Q 002770 730 ----------YINSSLTPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALAD---VGIALQIEAQENAA----STAASII 792 (883)
Q Consensus 730 ----------~v~~~~~p~~K~~~i~~l~~~g~~v~~vGDg~ND~~al~~Ad---vgIa~~~~~~~~~a----~~~adiv 792 (883)
..+.+.+|++|..+++.++..++.|+|||||.||++|++.|| |||+||. .+++.. +..||++
T Consensus 284 KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~-~g~~~~~el~~~~AD~i 362 (380)
T d1qyia_ 284 KPNPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL-KGKDAAGELEAHHADYV 362 (380)
T ss_dssp TTSTHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBT-TBGGGHHHHHHTTCSEE
T ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEEEECCC-CCCCCHHHHHHCCCCEE
T ss_conf 99869999999980887788999999738998869998899899999998799889994588-88643778976799999
Q ss_pred EECCCHHHHHHHHH
Q ss_conf 94799336999999
Q 002770 793 LLGNKLSQVVDALD 806 (883)
Q Consensus 793 l~~~~l~~i~~~i~ 806 (883)
+ +++..+..++.
T Consensus 363 i--~~~~el~~il~ 374 (380)
T d1qyia_ 363 I--NHLGELRGVLD 374 (380)
T ss_dssp E--SSGGGHHHHHS
T ss_pred E--CCHHHHHHHHH
T ss_conf 8--89999999999
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.14 E-value=7.5e-10 Score=87.33 Aligned_cols=72 Identities=18% Similarity=0.108 Sum_probs=60.7
Q ss_pred CCCCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHHHHH
Q ss_conf 900159999998446----99389994893699988719935996149722889853579994799336999999999
Q 002770 736 TPQQKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLAK 809 (883)
Q Consensus 736 ~p~~K~~~i~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~~~R 809 (883)
....|...++.+.++ .+.++++||+.||.+|++.|++||+| +++.+.+++.||+|+.+++..++.+++..--
T Consensus 149 ~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav--~na~~~~k~~A~~v~~~~~~~gv~~~i~~~l 224 (230)
T d1wr8a_ 149 PWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV--AQAPKILKENADYVTKKEYGEGGAEAIYHIL 224 (230)
T ss_dssp TTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHTTCSEECSSCHHHHHHHHHHHHH
T ss_pred CCCCCCHHHCCCCCCCCCCHHHEEEEECCCCHHHHHHHCCEEEEE--CCCCHHHHHHCCEEECCCCCCHHHHHHHHHH
T ss_conf 776761332011211001332425662673079999978907998--8987999985799989998478999999999
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.11 E-value=1.6e-09 Score=84.78 Aligned_cols=99 Identities=12% Similarity=0.138 Sum_probs=72.4
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHC----CCEEEEECCCCCCH
Q ss_conf 86499999999779979999939969999999999099986499803900159999998446----99389994893699
Q 002770 689 RHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTS----GHHVAMVGDGINDA 764 (883)
Q Consensus 689 r~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~i~~l~~~----g~~v~~vGDg~ND~ 764 (883)
........+.+...+..+ ..++. .+........|...++.+.+. ...++++|||.||.
T Consensus 119 ~~~~~~~~~~~~~~~~~i-~~~~~-----------------~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~ 180 (225)
T d1l6ra_ 119 PEDVDYVRKEAESRGFVI-FYSGY-----------------SWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDM 180 (225)
T ss_dssp GGGHHHHHHHHHTTTEEE-EEETT-----------------EEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGH
T ss_pred HHHHHHHHHHHHHCCCEE-EECCC-----------------EEEECCCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCHH
T ss_conf 999999999874257299-98891-----------------799638765227899987665100230225644884359
Q ss_pred HHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHHH
Q ss_conf 9887199359961497228898535799947993369999999
Q 002770 765 PSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDL 807 (883)
Q Consensus 765 ~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~~ 807 (883)
+|++.|++||+| +++.+..++.||+++..++..++.++++.
T Consensus 181 ~m~~~a~~~vav--~na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 181 PMFQLPVRKACP--ANATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp HHHTSSSEEEEC--TTSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HHHHHCCEEEEE--CCCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 999977908998--89759999849999898984889999998
|
| >d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=2e-10 Score=91.64 Aligned_cols=70 Identities=20% Similarity=0.479 Sum_probs=65.4
Q ss_pred CEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 4289999438899126999999420699920898745898089984463000123320278889999997149753223
Q 002770 71 DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRR 149 (883)
Q Consensus 71 ~~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~ 149 (883)
+++..|.|+||+|++|+++||+.|++.+||.+++||+.++++.|.|++.. ++.++|.+.|+++||++.+.
T Consensus 2 t~~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~---------~~~~~i~~~i~~~Gy~a~l~ 71 (72)
T d2aw0a_ 2 TQETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLL---------TSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp CEEEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTT---------CCHHHHHHHHHHHTSEEEEC
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC---------CCHHHHHHHHHHHCCCCEEC
T ss_conf 67999999990168899999998726899679999888999999989999---------99999999999509995828
|
| >d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Mercuric ion binding protein MerP species: Ralstonia metallidurans CH34 [TaxId: 266264]
Probab=99.08 E-value=3e-10 Score=90.31 Aligned_cols=70 Identities=26% Similarity=0.453 Sum_probs=65.7
Q ss_pred CEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 4289999438899126999999420699920898745898089984463000123320278889999997149753223
Q 002770 71 DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRR 149 (883)
Q Consensus 71 ~~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~ 149 (883)
++++.|.|+||+|++|+++||+.|++.|||.++++|+.++++.+.|++.. ++.++|.+.|++.||++.+.
T Consensus 2 tqt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~---------~~~~~i~~~i~~~Gy~a~v~ 71 (72)
T d1osda_ 2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAK---------TSVQKLTKATADAGYPSSVK 71 (72)
T ss_dssp EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTT---------CCHHHHHHHHHHTTCCCEEC
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC---------CCHHHHHHHHHHCCCCEEEC
T ss_conf 80899998992018999999999974999679999867999999989999---------99999999999609996807
|
| >d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.08 E-value=3e-10 Score=90.26 Aligned_cols=74 Identities=19% Similarity=0.333 Sum_probs=68.3
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCC
Q ss_conf 86428999943889912699999942069992089874589808998446300012332027888999999714975322
Q 002770 69 RVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKR 148 (883)
Q Consensus 69 ~~~~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~ 148 (883)
.....+.|.|+||+|++|+++||++|.+++||.++++|+.++++.|.|++.. ++.++|.+.|+++||++.+
T Consensus 6 ~~~~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~---------~~~~~i~~~I~~~Gy~a~~ 76 (84)
T d1q8la_ 6 AGEVVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHL---------ISVEEMKKQIEAMGFPAFV 76 (84)
T ss_dssp SSCEEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTT---------CCHHHHHHHHHHTTCCEEC
T ss_pred CCCEEEEEEECCEECHHHHHHHHHHHHCCCCCEEEEEECCCCEECEEECCCC---------CCHHHHHHHHHHHCCCCEE
T ss_conf 8877999997991868999999999862899569999899997851544661---------3899999999970996087
Q ss_pred CCC
Q ss_conf 346
Q 002770 149 RVS 151 (883)
Q Consensus 149 ~~~ 151 (883)
...
T Consensus 77 ~~~ 79 (84)
T d1q8la_ 77 KKQ 79 (84)
T ss_dssp SCC
T ss_pred CCC
T ss_conf 687
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.07 E-value=5.9e-10 Score=88.08 Aligned_cols=113 Identities=20% Similarity=0.276 Sum_probs=92.9
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEE-------------------CCCCCHHHHHHHH
Q ss_conf 798649999999977997999993996999999999909998649980-------------------3900159999998
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSS-------------------LTPQQKSEVISTL 747 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~~v~~~-------------------~~p~~K~~~i~~l 747 (883)
.++|++.+.++.||+.|++++++||.....+..+++.+|++..++++. ..+..|..+++.+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~K~~~v~~~ 161 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLL 161 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEHHCCCCCEEEEEEECCCHHHHHHHHH
T ss_conf 04777999999997379979998999358888889870996100366553222000003642224652422089999999
Q ss_pred HHC--CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHH
Q ss_conf 446--993899948936999887199359961497228898535799947993369
Q 002770 748 QTS--GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQV 801 (883)
Q Consensus 748 ~~~--g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i 801 (883)
+.+ ...+.++||+.||++|++.|+++||++........++.+|+++. ++..|
T Consensus 162 ~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~--~f~el 215 (217)
T d1nnla_ 162 KEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYIT--DFVEL 215 (217)
T ss_dssp HHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEES--CGGGG
T ss_pred HHCCCCCCCEEEEECHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCEEC--CHHHH
T ss_conf 8634866638997178659989868921997987778999986899868--98884
|
| >d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Menkes copper-transporting ATPase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=5.9e-10 Score=88.08 Aligned_cols=74 Identities=20% Similarity=0.357 Sum_probs=68.2
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCC
Q ss_conf 86428999943889912699999942069992089874589808998446300012332027888999999714975322
Q 002770 69 RVDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKR 148 (883)
Q Consensus 69 ~~~~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~ 148 (883)
....++.|.|+||+|++|++.||++|++.+||.++++|+.++++.+.|++.. ++.++|.+.|++.||++.+
T Consensus 5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~---------~~~~~i~~~i~~~GY~~~~ 75 (79)
T d1kvja_ 5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKL---------QTPKTLQEAIDDMGFDAVI 75 (79)
T ss_dssp TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTT---------CCHHHHHHHHHHHTCEEEE
T ss_pred CCCEEEEEEECCEECHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC---------CCHHHHHHHHHHCCCCCEE
T ss_conf 8825999998994548999999999863799469999888999999989999---------9999999999950997475
Q ss_pred CCC
Q ss_conf 346
Q 002770 149 RVS 151 (883)
Q Consensus 149 ~~~ 151 (883)
..+
T Consensus 76 ~~~ 78 (79)
T d1kvja_ 76 HNP 78 (79)
T ss_dssp CSC
T ss_pred CCC
T ss_conf 799
|
| >d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper transporter domain ccc2a species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.05 E-value=3.1e-10 Score=90.18 Aligned_cols=69 Identities=25% Similarity=0.526 Sum_probs=63.9
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 2899994388991269999994206999208987458980899844630001233202788899999971497532234
Q 002770 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRV 150 (883)
Q Consensus 72 ~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~~ 150 (883)
+++.|.|+||+|++|+++||+.|++++||.+++||+.++++.|.|++.. +.+++.+.|+++||++.+.+
T Consensus 2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~----------~~~~i~~~i~~~Gy~a~~~~ 70 (72)
T d2ggpb1 2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEV----------TADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSC----------CHHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC----------CHHHHHHHHHHHCCCEEECC
T ss_conf 6999998991658999999999835899559999888999999999999----------99999999997199809826
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.05 E-value=1.4e-09 Score=85.28 Aligned_cols=128 Identities=19% Similarity=0.258 Sum_probs=97.6
Q ss_pred EEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf 99996595589999935879864999999997799799999399699999999990999864998039001599999984
Q 002770 669 VYVGREGEGIIGAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQ 748 (883)
Q Consensus 669 ~~~a~~~~~~iG~i~l~D~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~i~~l~ 748 (883)
+++..+|. .+-.+...| ...|+.|+..|+.+.++||+....+...++++++. .++.... +|...++.+.
T Consensus 21 v~~~~dG~-e~k~F~~~D------g~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~--~~~~~~~--~K~~~l~~~~ 89 (177)
T d1k1ea_ 21 LHYDANGE-AIKSFHVRD------GLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK--LFFLGKL--EKETACFDLM 89 (177)
T ss_dssp EEEETTEE-EEEEEEHHH------HHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC--EEEESCS--CHHHHHHHHH
T ss_pred EEEECCCC-EEEEEECCC------HHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHCCC--CCCCCCC--CHHHHHHHHH
T ss_conf 99938997-999997760------48887876521789996698446789987632122--0110136--3888999999
Q ss_pred ----HCCCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCC----HHHHHHHHHHHH
Q ss_conf ----4699389994893699988719935996149722889853579994799----336999999999
Q 002770 749 ----TSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNK----LSQVVDALDLAK 809 (883)
Q Consensus 749 ----~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~----l~~i~~~i~~~R 809 (883)
-..+.|+++||+.||.++|+.+++++|| +++.+.+++.||+|+..+. +..+.+.+...+
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap--~nA~~~vk~~A~~Vt~~~GG~GavrE~~e~il~~~ 156 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV--ADAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQ 156 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHT
T ss_pred HHHCCCCCEEEEECCCCCHHHHHHHCCEEEEC--CCCCHHHHHHCCEEECCCCCCCHHHHHHHHHHHHC
T ss_conf 98667752257705884078999668928984--88649999858999178899763999999999988
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.03 E-value=2.2e-09 Score=83.89 Aligned_cols=72 Identities=24% Similarity=0.335 Sum_probs=61.0
Q ss_pred EECCCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf 803900--159999998446----99389994893699988719935996149722889853579994799336999999
Q 002770 733 SSLTPQ--QKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 733 ~~~~p~--~K~~~i~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
..+.|. .|...++.+.+. .+.++++|||.||.+||+.|+.|+|| +++.+..++.|++++.+++-.++.++++
T Consensus 205 ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam--~na~~~~k~~A~~v~~~~~~~Gv~~~l~ 282 (285)
T d1nrwa_ 205 FELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM--GNAREDIKSIADAVTLTNDEHGVAHMMK 282 (285)
T ss_dssp EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC--TTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCEEEEE--CCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 99955540236689887765055720499992978889999848918996--8998999985898827887558999999
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.03 E-value=6.3e-10 Score=87.87 Aligned_cols=77 Identities=21% Similarity=0.220 Sum_probs=69.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEECCCHHHHHHCCCCEEEECCC--CCCCCCCEEE
Q ss_conf 9993378999999887763112111024799999999998754922217258744106729995386--5445795079
Q 002770 481 PNGNPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGAKQGLLIRGGDVLERLARIDYLALDKT--GTLTEGKPAV 557 (883)
Q Consensus 481 ~~~~~~~~~l~~~i~vlvva~P~aL~la~p~a~~~~~~~~ak~gilvk~~~~le~lg~v~~i~fDKT--GTLT~~~~~v 557 (883)
.+...+...+..++++.+++.|++|++++.+++..+.++++|+|++||+..++|++|+....|.||| ++||.|-+.+
T Consensus 172 ~~~~~~~~~~~~ai~l~V~~iPEgLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 172 SWIRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp CSSSCGGGHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 4689999999999999998675168999999999999999863660665899999999988886776401334369999
|
| >d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=99.02 E-value=6.2e-10 Score=87.94 Aligned_cols=73 Identities=21% Similarity=0.399 Sum_probs=67.0
Q ss_pred CEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 42899994388991269999994206999208987458980899844630001233202788899999971497532234
Q 002770 71 DSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRRV 150 (883)
Q Consensus 71 ~~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~~ 150 (883)
+.++.|.|+||+|++|+++||+.|.+.+||.++.+|+.++++.|.|++.. ++.++|.+.|++.||++.+..
T Consensus 1 T~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~---------~~~~~i~~~i~~~Gy~~~~~~ 71 (79)
T d1p6ta2 1 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKE---------ASVSDLKEAVDKLGYKLKLKG 71 (79)
T ss_dssp CEEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTT---------CCHHHHHHHHHHHTCCEEESC
T ss_pred CEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCC---------CCHHHHHHHHHHHCCCEEECC
T ss_conf 93899998995368999999999755799079999968989999989998---------999999999998799607788
Q ss_pred CC
Q ss_conf 67
Q 002770 151 SG 152 (883)
Q Consensus 151 ~~ 152 (883)
..
T Consensus 72 ~~ 73 (79)
T d1p6ta2 72 EQ 73 (79)
T ss_dssp SS
T ss_pred CC
T ss_conf 66
|
| >d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Enterococcus hirae [TaxId: 1354]
Probab=99.01 E-value=6.4e-10 Score=87.84 Aligned_cols=65 Identities=28% Similarity=0.460 Sum_probs=61.6
Q ss_pred EEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCC
Q ss_conf 99943889912699999942069992089874589808998446300012332027888999999714975322
Q 002770 75 LLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKR 148 (883)
Q Consensus 75 ~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~ 148 (883)
.|.|+||+|++|+++||+.|++++||.+++||+.++++.+.||+.. .+.+++.++++++||++.+
T Consensus 3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~---------~~~~~i~~~i~~~Gy~a~v 67 (68)
T d1cpza_ 3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEAN---------VQATEICQAINELGYQAEV 67 (68)
T ss_dssp EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTT---------CCHHHHHHHHHTTSSCEEE
T ss_pred EEEECCEECHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC---------CCHHHHHHHHHHHCCCCEE
T ss_conf 8898986758999999999756999379999877999999989999---------9999999999964998398
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.99 E-value=5.2e-09 Score=81.04 Aligned_cols=113 Identities=29% Similarity=0.357 Sum_probs=91.0
Q ss_pred EEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCHHHHHHHH
Q ss_conf 79999515789689999999753006996999999998956999977767100158638999989999953788999985
Q 002770 556 AVFNVASFVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQLAEPGFGILGEVDGRLVAVGTLEWVYERF 635 (883)
Q Consensus 556 ~v~~~~~~~~~~~~~l~~~~~~e~~~~hpi~~Ai~~~a~~~~~~~~~~~~~~~~~g~gi~~~~~~~~~~~G~~~~i~~~~ 635 (883)
+|+++.+.+.+++++|.+++++|+.|+||+++||++++++.++..+...+++..+|+|+.+ +.+.+|+++|+.+..
T Consensus 1 eVt~i~~~~~~e~elL~~aaslE~~S~HPlA~AIv~~a~~~~~~~~~~~~~~~~~G~Gi~g----~~v~vG~~~~~~~~~ 76 (113)
T d2b8ea2 1 EVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVA----DGILVGNKRLMEDFG 76 (113)
T ss_dssp EEEEEEESSSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHTTTCCCCCCSCEEEETTTEEEE----TTEEEECHHHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCEEEE----EEEEECCHHHHHHCC
T ss_conf 9349995699999999999998776878239999999998057877632316631633786----899977688777609
Q ss_pred HCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEEEEC
Q ss_conf 10699801256789975100234696779982999996595589999935
Q 002770 636 QKQGDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAIS 685 (883)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~iG~i~l~ 685 (883)
... ++.. ...... +...|.++++++.|+. ++|+|++.
T Consensus 77 ~~~--~~~~---~~~~~~-------~~~~G~T~v~va~d~~-~~G~iala 113 (113)
T d2b8ea2 77 VAV--SNEV---ELALEK-------LEREAKTAVIVARNGR-VEGIIAVS 113 (113)
T ss_dssp CCC--CHHH---HHHHHH-------HHTTTCEEEEEEETTE-EEEEEEEE
T ss_pred CCC--CHHH---HHHHHH-------HHHCCCEEEEEEECCE-EEEEEEEC
T ss_conf 988--9899---999999-------9867995999999999-99999979
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.99 E-value=3e-09 Score=82.79 Aligned_cols=71 Identities=20% Similarity=0.289 Sum_probs=61.1
Q ss_pred ECCCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf 03900--159999998446----99389994893699988719935996149722889853579994799336999999
Q 002770 734 SLTPQ--QKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 734 ~~~p~--~K~~~i~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
.+.|. +|...++.+.+. ...++++|||.||.+|++.|+.|++| +++.+..++.|++++.+++-.++.++++
T Consensus 190 ~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am--~na~~~lk~~a~~i~~~~~~~Gv~~~l~ 266 (271)
T d1rkqa_ 190 EILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV--DNAIPSVKEVANFVTKSNLEDGVAFAIE 266 (271)
T ss_dssp EEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHCSEECCCTTTTHHHHHHH
T ss_pred EECCCCCCCCCCCCEEHHHCCCCHHCEEEEECCHHHHHHHHHCCCEEEE--CCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 8527888765420000110011420179991867679999858918996--7987999985898838898583999999
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=3.3e-08 Score=75.09 Aligned_cols=123 Identities=15% Similarity=0.118 Sum_probs=88.1
Q ss_pred EEEEEEC-CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCC------CCCC-CEEEEEECCEEEEECC
Q ss_conf 7999951-578968999999975300699699999999895699997776710------0158-6389999899999537
Q 002770 556 AVFNVAS-FVYDESEILKIAAAVEKTATHPIAKAIVNKAESLNLTSPITRGQL------AEPG-FGILGEVDGRLVAVGT 627 (883)
Q Consensus 556 ~v~~~~~-~~~~~~~~l~~~~~~e~~~~hpi~~Ai~~~a~~~~~~~~~~~~~~------~~~g-~gi~~~~~~~~~~~G~ 627 (883)
+++++.+ .+.+++++|.+++++|+.|+||+++||++++++.+...+...... .... .+....++|+.+.+|+
T Consensus 3 q~td~ip~~G~~~~ell~~AA~aE~~SeHPlakAIv~~Ak~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~v~~G~ 82 (136)
T d2a29a1 3 QASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGS 82 (136)
T ss_dssp EEEEEEECTTCCHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHCCCCCCTTTTTCEEEEEETTTTEEEEEETTEEEEEEC
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECH
T ss_conf 75467737999999999999997277786689999999998558775531101244445432342588987897999667
Q ss_pred HHHHHHHHHCC--CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCC
Q ss_conf 88999985106--998012567899751002346967799829999965955899999358798
Q 002770 628 LEWVYERFQKQ--GDHSDVQHLEHAVTHQSSELASPSNYSKSVVYVGREGEGIIGAIAISDSLR 689 (883)
Q Consensus 628 ~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~~~~~~iG~i~l~D~lr 689 (883)
+.++.+..... ..+.+.....+. +...|.++++++.++. ++|+|++.|++|
T Consensus 83 ~~~~~~~~~~~g~~~~~~~~~~~~~----------~~~~G~Tvv~Va~d~~-~~G~i~l~D~iK 135 (136)
T d2a29a1 83 VDAIRRHVEANGGHFPTDVDQKVDQ----------VARQGATPLVVVEGSR-VLGVIALKDIVK 135 (136)
T ss_dssp HHHHHHHHHHHTCCCCHHHHHHHHH----------HHHTTSEEEEEEETTE-EEEEEEEEESSC
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHH----------HHHCCCEEEEEEECCE-EEEEEEEEEECC
T ss_conf 8999999997189880999999999----------9977985999999999-999999983058
|
| >d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Bacillus subtilis, CopZ [TaxId: 1423]
Probab=98.97 E-value=1.6e-09 Score=84.79 Aligned_cols=67 Identities=21% Similarity=0.414 Sum_probs=62.8
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC
Q ss_conf 2899994388991269999994206999208987458980899844630001233202788899999971497532
Q 002770 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAK 147 (883)
Q Consensus 72 ~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~ 147 (883)
++..|.|+||+|++|++.||++|++.+||.++++|+.++++.+.||+.. .+.+++.+.|+++||++.
T Consensus 2 ~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~---------~~~~~i~~~i~~~Gy~~~ 68 (69)
T d2qifa1 2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADK---------VSVKDIADAIEDQGYDVA 68 (69)
T ss_dssp EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTT---------CCHHHHHHHHHHTTCEEC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC---------CCHHHHHHHHHHHCCCCC
T ss_conf 2799999991478999999999843899569999887999999989998---------999999999997497621
|
| >d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Potential copper-translocating P-type ATPase CopA (YvgX) species: Bacillus subtilis [TaxId: 1423]
Probab=98.96 E-value=1.4e-09 Score=85.26 Aligned_cols=68 Identities=24% Similarity=0.445 Sum_probs=63.5
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCC
Q ss_conf 64289999438899126999999420699920898745898089984463000123320278889999997149753
Q 002770 70 VDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEA 146 (883)
Q Consensus 70 ~~~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~ 146 (883)
+..++.|.|+||+|++|+++||++|++.+||.++++|+.++++.+.||+.. .+.+++.+.++++||+.
T Consensus 4 ~~~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~---------~~~~~i~~~i~~~Gy~v 71 (72)
T d1p6ta1 4 EQKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAE---------TGTAAIQEKIEKLGYHV 71 (72)
T ss_dssp CCEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTT---------SCHHHHHHHHHHHTCEE
T ss_pred CCEEEEEEECCEECHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC---------CCHHHHHHHHHHHCCCC
T ss_conf 856999999992418999999999974999579999867999999989998---------99999999999719863
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.95 E-value=2.8e-09 Score=83.09 Aligned_cols=71 Identities=23% Similarity=0.248 Sum_probs=61.3
Q ss_pred ECCCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf 03900--159999998446----99389994893699988719935996149722889853579994799336999999
Q 002770 734 SLTPQ--QKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 734 ~~~p~--~K~~~i~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
.++|. .|...++.|++. .+.|+++|||.||.+||+.|+.|++| +++.+..++.|++++.+++-.++.+.++
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam--~Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM--GNAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC--TTCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCEEEEE--CCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 8845865777888877665021424189990884419999858918995--8998999984788818898459999999
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.86 E-value=6.4e-09 Score=80.34 Aligned_cols=123 Identities=17% Similarity=0.184 Sum_probs=98.3
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEE-----------------------ECCCCCHHHH
Q ss_conf 79864999999997799799999399699999999990999864998-----------------------0390015999
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINS-----------------------SLTPQQKSEV 743 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~~v~~-----------------------~~~p~~K~~~ 743 (883)
+++|++.+.++.|++.|+++.++|+.....+..+.+++|+.. .+++ ...|+.|..+
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~-~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~ 153 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD-RIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSV 153 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGG-GEEEEEEECSSSBCEEECTTCCCTTCCSCCSSCHHHH
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC-CEEEEEEEEECCCCEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 424999999999985425311577530666999999809950-1454347982881022010135432556789999999
Q ss_pred HHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHH-CCEEEECCCHHHHHHHHHHHHHHHH
Q ss_conf 999844699389994893699988719935996149722889853-5799947993369999999999999
Q 002770 744 ISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTA-ASIILLGNKLSQVVDALDLAKATMA 813 (883)
Q Consensus 744 i~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~-adivl~~~~l~~i~~~i~~~R~~~~ 813 (883)
++.++..++.|.|+||+.||++|++.||+++++ +...+..++. .++ ..-++++.|...++.-.....
T Consensus 154 ~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~--~~~~~~~~~~~~~~-~~~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 154 IHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYLLNECREQNLNH-LPYQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp HHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHHHHHHHHTTCCE-ECCSSHHHHHHHHHTSHHHHH
T ss_pred HHHHCCCCCEEEEEECCHHHHHHHHHCCEEEEE--CCHHHHHHHCCCCE-EECCCHHHHHHHHHHHHHHHH
T ss_conf 998467886389980763139999988997870--64679999829983-624999999999999878999
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.84 E-value=2.6e-08 Score=75.76 Aligned_cols=67 Identities=24% Similarity=0.236 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHH-HHHHHHH
Q ss_conf 0159999998446----9938999489369998871993599614972288985357999479933-6999999
Q 002770 738 QQKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLS-QVVDALD 806 (883)
Q Consensus 738 ~~K~~~i~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~-~i~~~i~ 806 (883)
..|...++.+.+. .+.++++|||.||.+||+.|+.|++| +++.+.+++.||+++..++-. ++.++++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~--~na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV--ANATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC--TTCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHCCCEEEE--CCCCHHHHHHCCEEECCCCCCCHHHHHHH
T ss_conf 5057788877664100202079964876369999858918996--89989999848999998488869999999
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.82 E-value=2.1e-08 Score=76.49 Aligned_cols=71 Identities=24% Similarity=0.339 Sum_probs=61.3
Q ss_pred ECCCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf 03900--159999998446----99389994893699988719935996149722889853579994799336999999
Q 002770 734 SLTPQ--QKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 734 ~~~p~--~K~~~i~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
.++|. .|...++.+.+. ...|+++||+.||.+||+.+++|++| +++.+.+++.||+++.+++-.++.++++
T Consensus 183 di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~--~na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM--ENAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC--TTSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCEEEE--CCCCHHHHHHCCEECCCCCCCHHHHHHH
T ss_conf 6558777516789999886036822089980884409999868908994--8998999985898858887538999999
|
| >d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Metal ion-transporting ATPase ZntA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.81 E-value=1e-08 Score=78.79 Aligned_cols=67 Identities=21% Similarity=0.384 Sum_probs=60.6
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 289999438899126999999420699920898745898089984463000123320278889999997149753223
Q 002770 72 STVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRR 149 (883)
Q Consensus 72 ~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~ 149 (883)
++..|.|+||+|++|+++||+.|++++||.++.||+.++++.|.+++.. .++|.+.|.++||++...
T Consensus 3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~-----------~~~i~~~i~~~GY~v~~~ 69 (73)
T d1mwza_ 3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDI-----------RAQVESALQKAGYSLRDE 69 (73)
T ss_dssp CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCC-----------HHHHHHHHHHHTCCCCBC
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCC-----------HHHHHHHHHHCCCCCCCC
T ss_conf 8899998995778999999999964899459999889999999989999-----------999999999769935678
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.77 E-value=1.6e-08 Score=77.38 Aligned_cols=72 Identities=21% Similarity=0.255 Sum_probs=61.4
Q ss_pred ECCCC--CHHHHHHHHHHC----CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHHH
Q ss_conf 03900--159999998446----993899948936999887199359961497228898535799947993369999999
Q 002770 734 SLTPQ--QKSEVISTLQTS----GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDL 807 (883)
Q Consensus 734 ~~~p~--~K~~~i~~l~~~----g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~~ 807 (883)
.+.|. .|...++.|.++ ...++++|||.||.+||+.|+.|++| +++.+.+++.||+|+.+++-.++.++++.
T Consensus 179 ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav--~na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 179 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM--GQAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC--TTSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHCCCCHHHEEEECCCCCCHHHHHHCCEEEEE--CCCCHHHHHHCCEEECCCCCCHHHHHHHH
T ss_conf 9974889999999999873223575516765885559999848908995--89989999847978088875689999998
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.75 E-value=1.4e-07 Score=70.29 Aligned_cols=117 Identities=18% Similarity=0.145 Sum_probs=91.6
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCE-------------EEEECCCCCHHHHHHHHHHCCCEE
Q ss_conf 9864999999997799799999399699999999990999864-------------998039001599999984469938
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEY-------------INSSLTPQQKSEVISTLQTSGHHV 754 (883)
Q Consensus 688 lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~~-------------v~~~~~p~~K~~~i~~l~~~g~~v 754 (883)
..+.....++.+ +.+.+..++++.............++.... ......+..+...++.++...+.|
T Consensus 70 ~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ev 148 (206)
T d1rkua_ 70 PLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRV 148 (206)
T ss_dssp CCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHHHHHHHTTCEE
T ss_pred CCCHHHHHHHHH-HCCCEEEEECCCCHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCE
T ss_conf 562488999886-0474688851671388889999847833331102562144454321120145788999864256521
Q ss_pred EEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHHHH
Q ss_conf 999489369998871993599614972288985357999479933699999999
Q 002770 755 AMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALDLA 808 (883)
Q Consensus 755 ~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~~~ 808 (883)
+++|||.||++|++.|++|||| +...++.++++|+++.+ +...+..++...
T Consensus 149 iaiGDg~NDi~Ml~~Ag~gIAm--na~~~v~~~~~~~~~~~-~~~d~~~~~~~~ 199 (206)
T d1rkua_ 149 IAAGDSYNDTTMLSEAHAGILF--HAPENVIREFPQFPAVH-TYEDLKREFLKA 199 (206)
T ss_dssp EEEECSSTTHHHHHHSSEEEEE--SCCHHHHHHCTTSCEEC-SHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHCCCCEEE--CCCHHHHHHCCCCEEEC-CHHHHHHHHHHH
T ss_conf 8843873279999858940997--89779998678955626-889999999997
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.69 E-value=5.9e-08 Score=73.17 Aligned_cols=115 Identities=22% Similarity=0.326 Sum_probs=90.8
Q ss_pred CCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEC-----------------CCCCHHHHH----
Q ss_conf 87986499999999779979999939969999999999099986499803-----------------900159999----
Q 002770 686 DSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSL-----------------TPQQKSEVI---- 744 (883)
Q Consensus 686 D~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~~v~~~~-----------------~p~~K~~~i---- 744 (883)
.++.+++.+.++.++..|..+.++|+.....+....++.++. ..+... ....|...+
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLD--YAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIA 151 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCS--EEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHCCCHH--HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 001355999999999749878763265422223022203204--666544211012221233321111234541033578
Q ss_pred HHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHH
Q ss_conf 9984469938999489369998871993599614972288985357999479933699999
Q 002770 745 STLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 745 ~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i 805 (883)
+.++...+.+.++|||.||++|++.|++|||| ++.+..++.||+++.++|+..|.+.+
T Consensus 152 ~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~---na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 152 KIEGINLEDTVAVGDGANDISMFKKAGLKIAF---CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE---SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred HHHCCCCCCEEEECCCCCHHHHHHHCCCCEEE---CCCHHHHHHCCEEECCCCHHHHHHHH
T ss_conf 88466655417863784749999988987899---98999997499999179999999986
|
| >d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone for superoxide dismutase, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.66 E-value=7.1e-08 Score=72.54 Aligned_cols=67 Identities=18% Similarity=0.354 Sum_probs=60.0
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 64289999438899126999999420699920898745898089984463000123320278889999997149753223
Q 002770 70 VDSTVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRR 149 (883)
Q Consensus 70 ~~~~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~ 149 (883)
+..+..|.|+ |+|++|+++||++|++++||.++.+|+.++++.|.++. +++++.++|++.||++.++
T Consensus 4 ~~~~~~f~V~-M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~------------~~~~i~~~I~~~G~~A~l~ 70 (72)
T d1qupa2 4 DTYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSV------------APSTIINTLRNCGKDAIIR 70 (72)
T ss_dssp GCEEEEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESS------------CHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEEEEC-CCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEC------------CHHHHHHHHHHHCCCEEEE
T ss_conf 7389999995-49889999999998669980499998889999997548------------9999999999749988981
|
| >d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: Copper chaperone species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]
Probab=98.62 E-value=2.7e-08 Score=75.67 Aligned_cols=63 Identities=22% Similarity=0.411 Sum_probs=57.1
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC
Q ss_conf 899994388991269999994206999208987458980899844630001233202788899999971497532
Q 002770 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAK 147 (883)
Q Consensus 73 ~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~ 147 (883)
++.|.|+||+|++|+++||+.|++++||.++.+|+.++++.|.++. +.++|.++|++.||++.
T Consensus 2 t~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~------------~~~~i~~~i~~~GY~ve 64 (64)
T d1sb6a_ 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSAL------------GEEQLRTAIASAGHEVE 64 (64)
T ss_dssp EEEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSS------------CHHHHHHHHHHHCCCCC
T ss_pred EEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCC------------CHHHHHHHHHHCCCCCC
T ss_conf 4999979904630789999998559990698714788799992679------------99999999998299889
|
| >d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.53 E-value=2.7e-07 Score=68.23 Aligned_cols=65 Identities=18% Similarity=0.303 Sum_probs=58.3
Q ss_pred CCEEEEEEECCCCCHHHHHHHHHHHCCC-CCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCC
Q ss_conf 6428999943889912699999942069-99208987458980899844630001233202788899999971497532
Q 002770 70 VDSTVLLDVSGMMCGGCVARVKSVLTAD-DRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAK 147 (883)
Q Consensus 70 ~~~~~~l~I~GM~C~~C~~~Ie~~L~~~-~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~ 147 (883)
+.++..|.|+ |+|++|+.+|+++|.++ +||.++.+|+.++++.|..+. +++++.+.|++.||++.
T Consensus 2 ~~kt~~f~V~-MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~------------~~~~i~~~i~~~G~~~~ 67 (72)
T d1cc8a_ 2 EIKHYQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTL------------PYDFILEKIKKTGKEVR 67 (72)
T ss_dssp CCEEEEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESS------------CHHHHHHHHHTTSSCEE
T ss_pred CCEEEEEEEC-CCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECC------------CHHHHHHHHHHHCCCCC
T ss_conf 8589999987-393888999999997376743899998899899994069------------99999999999799658
|
| >d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ferredoxin-like superfamily: HMA, heavy metal-associated domain family: HMA, heavy metal-associated domain domain: ATX1 metallochaperone protein (ATOX1) species: Human (Homo sapiens), HAH1 [TaxId: 9606]
Probab=98.52 E-value=1.4e-07 Score=70.34 Aligned_cols=63 Identities=22% Similarity=0.342 Sum_probs=56.4
Q ss_pred EEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 89999438899126999999420699920898745898089984463000123320278889999997149753223
Q 002770 73 TVLLDVSGMMCGGCVARVKSVLTADDRVDSVAVNMLTETAAIKLRTEAVEESEEVVNNVAESLGKRLMECGFEAKRR 149 (883)
Q Consensus 73 ~~~l~I~GM~C~~C~~~Ie~~L~~~~gV~~~~v~l~~~~~~v~~~~~~~~~~~~~~~~~~~~i~~~i~~~G~~~~~~ 149 (883)
+..|.| +|+|++|+.+||++|++++|+ ++.+|+.++++.|.++. +++++.++|++.||++.+.
T Consensus 2 k~ef~V-~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~------------~~~~i~~~I~~~Gy~a~li 64 (66)
T d1fe0a_ 2 KHEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEH------------SMDTLLATLKKTGKTVSYL 64 (66)
T ss_dssp EEEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESS------------CHHHHHHHHHTTTSCEEEE
T ss_pred CEEEEE-CCCCHHHHHHHHHHHHCCCCC-EEEEECCCCEEEEEEEC------------CHHHHHHHHHHHCCEEEEE
T ss_conf 789998-419668888999998548986-99998688899998519------------9999999999859959995
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.47 E-value=4.5e-07 Score=66.54 Aligned_cols=50 Identities=20% Similarity=0.228 Sum_probs=35.8
Q ss_pred CHHHHHHHHHH----C-CCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCC
Q ss_conf 15999999844----6-9938999489369998871993599614972288985357
Q 002770 739 QKSEVISTLQT----S-GHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAAS 790 (883)
Q Consensus 739 ~K~~~i~~l~~----~-g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad 790 (883)
.|..-++.+.+ . ...++++|||.||.+||+.|+.||+| +++.+..++.++
T Consensus 179 ~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~--~Na~~~~~~~~~ 233 (243)
T d1wzca1 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV--GSLKHKKAQNVS 233 (243)
T ss_dssp CHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE--SSCCCTTCEEES
T ss_pred CCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHCCCCEEEE--CCCCHHHHHHHH
T ss_conf 0077999999983599914199984988589999849938992--799868870231
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.46 E-value=1e-06 Score=63.94 Aligned_cols=108 Identities=12% Similarity=0.115 Sum_probs=72.8
Q ss_pred EEEECCCCCHHHHHHHHHHHHCCCEEEEE-CCCCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCC----CEEE
Q ss_conf 99935879864999999997799799999-399699999999990999864998039001599999984469----9389
Q 002770 681 AIAISDSLRHDAEHTVRSLQQKGIKTLLL-SGDREEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSG----HHVA 755 (883)
Q Consensus 681 ~i~l~D~lr~~~~~~i~~L~~~gi~~~il-TGd~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~i~~l~~~g----~~v~ 755 (883)
.....+.......+..+.+++........ +++. .+..--....|...++.+.+.. ..++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v 182 (244)
T d1s2oa1 119 YHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGK----------------DVDLLPQRSNKGNATQYLQQHLAMEPSQTL 182 (244)
T ss_dssp EEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTT----------------EEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred EECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCC----------------EEEEEECCCCHHHHHHHHHHHCCCCHHHEE
T ss_conf 9525211589999999999863234126630781----------------899986764155778888774157730379
Q ss_pred EECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCC-------EEEECCCHHHHHHHHH
Q ss_conf 99489369998871993599614972288985357-------9994799336999999
Q 002770 756 MVGDGINDAPSLALADVGIALQIEAQENAASTAAS-------IILLGNKLSQVVDALD 806 (883)
Q Consensus 756 ~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~ad-------ivl~~~~l~~i~~~i~ 806 (883)
++||+.||.+||+.++.|++| +++.+..++.|| ++...++..++.++++
T Consensus 183 ~~GD~~ND~~Ml~~~~~~vav--~na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~ 238 (244)
T d1s2oa1 183 VCGDSGNDIGLFETSARGVIV--RNAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIA 238 (244)
T ss_dssp EEECSGGGHHHHTSSSEEEEC--TTCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHCCCEEEE--CCCCHHHHHHHHCCCCCCEEECCCCCCCHHHHHHH
T ss_conf 975888779999618918996--79999999986323666537718997148999999
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.36 E-value=4.1e-06 Score=59.37 Aligned_cols=41 Identities=24% Similarity=0.347 Sum_probs=31.0
Q ss_pred CHHHHHHHHHH-------CCCEEEEECCCCCCHHHHHHCCEEEEEECCCC
Q ss_conf 15999999844-------69938999489369998871993599614972
Q 002770 739 QKSEVISTLQT-------SGHHVAMVGDGINDAPSLALADVGIALQIEAQ 781 (883)
Q Consensus 739 ~K~~~i~~l~~-------~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~ 781 (883)
.|..-++.+.+ ....++++||+.||.+||+.|++||+| .++
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV--~n~ 231 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV--KGL 231 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC--CCC
T ss_pred HHHHHHHHHHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCEEEEE--ECC
T ss_conf 178999999999997598952199984978689999819908997--189
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.85 E-value=0.00014 Score=47.85 Aligned_cols=120 Identities=15% Similarity=0.204 Sum_probs=83.8
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC--EEEEEC-----------------CCCCHHHHHH--
Q ss_conf 7986499999999779979999939969999999999099986--499803-----------------9001599999--
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINSSL-----------------TPQQKSEVIS-- 745 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~--~v~~~~-----------------~p~~K~~~i~-- 745 (883)
++|+++++.++.|++.|+.+.++||.-...+..+++++|+... .++++- ....|...+.
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~~~~ 214 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGALKN 214 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHHHTT
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCHHHHH
T ss_conf 76638999999999749708998587399999999982998657469965799708826860347864345686315445
Q ss_pred ----HHHHCCCEEEEECCCCCCHHHHHH---CCEEEEEEC--CC---CCHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf ----984469938999489369998871---993599614--97---22889853579994799336999999
Q 002770 746 ----TLQTSGHHVAMVGDGINDAPSLAL---ADVGIALQI--EA---QENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 746 ----~l~~~g~~v~~vGDg~ND~~al~~---AdvgIa~~~--~~---~~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
.++.....+.++|||.||+.|... ++..++.|- .. .-+.-.++-|+|+.+|.--.++..+.
T Consensus 215 ~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v~~~il 287 (291)
T d2bdua1 215 TDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSIL 287 (291)
T ss_dssp HHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHHHHHHH
T ss_pred HHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
T ss_conf 9988532786768999677768999838854463245431376699879998760797885687846899999
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.84 E-value=0.0001 Score=48.94 Aligned_cols=66 Identities=15% Similarity=0.258 Sum_probs=46.7
Q ss_pred ECCCC--CHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf 03900--15999999844699389994893699988719935996149722889853579994799336999999
Q 002770 734 SLTPQ--QKSEVISTLQTSGHHVAMVGDGINDAPSLALADVGIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 734 ~~~p~--~K~~~i~~l~~~g~~v~~vGDg~ND~~al~~AdvgIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
.+.|. .|...++.|.++. .++++||+.||.+||+.++.|++|..++. +.+|++.+.+ ...+...++
T Consensus 152 di~p~g~~Kg~al~~l~~~~-~~i~~GDs~ND~~Mf~~~~~~~av~~g~~----~~~A~~~~~~--~~ev~~~l~ 219 (229)
T d1u02a_ 152 ELRVPGVNKGSAIRSVRGER-PAIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVAD--YIEMRKILK 219 (229)
T ss_dssp EEECTTCCHHHHHHHHHTTS-CEEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESS--HHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHCCC-CCEEECCCCCHHHHHHCCCCEEEEEECCC----CCCCEEECCC--HHHHHHHHH
T ss_conf 97369898899999974404-45664388870999960288289996898----7667287599--999999999
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.83 E-value=1.9e-05 Score=54.39 Aligned_cols=54 Identities=17% Similarity=0.229 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHC-CCEEEEECCC----CCCHHHHHHCC-EEEEEECCCCCHHHHHHCCEEE
Q ss_conf 0159999998446-9938999489----36999887199-3599614972288985357999
Q 002770 738 QQKSEVISTLQTS-GHHVAMVGDG----INDAPSLALAD-VGIALQIEAQENAASTAASIIL 793 (883)
Q Consensus 738 ~~K~~~i~~l~~~-g~~v~~vGDg----~ND~~al~~Ad-vgIa~~~~~~~~~a~~~adivl 793 (883)
-.|...++.|.+. .+.|+++||. .||.+|++.|+ .|+|| +++.+..+..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av--~na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV--VSPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC--SSHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHCCCCCEEEC--CCHHHHHHHHHHHCC
T ss_conf 027899999966984459998688999997299997179858991--898999999998619
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.81 E-value=2.2e-05 Score=53.93 Aligned_cols=117 Identities=16% Similarity=0.179 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHHHCC-CEEEEECCCCHHHHHHHHHHCCCCC--CEEEEEC---CCCCH----HHHHHHHHH---CCCEE
Q ss_conf 9864999999997799-7999993996999999999909998--6499803---90015----999999844---69938
Q 002770 688 LRHDAEHTVRSLQQKG-IKTLLLSGDREEAVAATAKEVGIGK--EYINSSL---TPQQK----SEVISTLQT---SGHHV 754 (883)
Q Consensus 688 lr~~~~~~i~~L~~~g-i~~~ilTGd~~~~a~~ia~~~gi~~--~~v~~~~---~p~~K----~~~i~~l~~---~g~~v 754 (883)
+-|++.+++++|++.| +++.++|+.+...+....+..|+.. +.+.+.- .+..+ ...++.+.. ..+.+
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~~~~~~~~~~~p~~~ 171 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQI 171 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSGGGHHHHHHHHHHHHHCCCCCGGGE
T ss_pred ECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 06852888765411231122355788500000123320122222222222334434541577888765300248776680
Q ss_pred EEECCCCCCHHHHHHCCE---EEEEECCCCCHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf 999489369998871993---5996149722889853579994799336999999
Q 002770 755 AMVGDGINDAPSLALADV---GIALQIEAQENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 755 ~~vGDg~ND~~al~~Adv---gIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
+||||+.+|+.|-+.|++ +|+.|.....+..+..+|+++ +++..+.+++.
T Consensus 172 l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi--~~~~el~~~l~ 224 (228)
T d2hcfa1 172 VIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLF--KNFAETDEVLA 224 (228)
T ss_dssp EEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEE--SCSCCHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 232487278999998499799980799998899658999998--99999999999
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.76 E-value=7.5e-05 Score=49.99 Aligned_cols=119 Identities=17% Similarity=0.231 Sum_probs=83.7
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC---CEEEEE-----C--CCCCHHHHHHHHHHC-CCEEE
Q ss_conf 798649999999977997999993996999999999909998---649980-----3--900159999998446-99389
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK---EYINSS-----L--TPQQKSEVISTLQTS-GHHVA 755 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~---~~v~~~-----~--~p~~K~~~i~~l~~~-g~~v~ 755 (883)
.+.+++.++++.|++.|+++.++|+.+......+.+.+|+.. +.+.+. . .|+.-...++.+... .+.++
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~~~KP~p~~~~~~~~~l~~~p~~~~v 178 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMI 178 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEE
T ss_pred CCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEE
T ss_conf 31775799999988502441101798356688889987640122334455543222345817789999995898765189
Q ss_pred EECCCCCCHHHHHHCCE-EEEEECCCC----CH---------------------HHHHHCCEEEECCCHHHHHHHHHH
Q ss_conf 99489369998871993-599614972----28---------------------898535799947993369999999
Q 002770 756 MVGDGINDAPSLALADV-GIALQIEAQ----EN---------------------AASTAASIILLGNKLSQVVDALDL 807 (883)
Q Consensus 756 ~vGDg~ND~~al~~Adv-gIa~~~~~~----~~---------------------~a~~~adivl~~~~l~~i~~~i~~ 807 (883)
||||..+|+.+-+.|++ .|++..+.. +. ..+.-||+++ +++..|+.+|+.
T Consensus 179 ~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad~vi--~~l~eL~~ii~~ 254 (257)
T d1swva_ 179 KVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI--ETMQELESVMEH 254 (257)
T ss_dssp EEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEE--SSGGGHHHHHHH
T ss_pred EEECCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEE--CCHHHHHHHHHH
T ss_conf 9968734089999879989998137777898989986279999999999999999747998998--799999999999
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.64 E-value=2.3e-05 Score=53.86 Aligned_cols=116 Identities=15% Similarity=0.194 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC--CEEEE-E------CCCCCHHHHHHHHHHCCCEEEEEC
Q ss_conf 98649999999977997999993996999999999909998--64998-0------390015999999844699389994
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINS-S------LTPQQKSEVISTLQTSGHHVAMVG 758 (883)
Q Consensus 688 lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~--~~v~~-~------~~p~~K~~~i~~l~~~g~~v~~vG 758 (883)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.. +.+++ . -.|+--..+.+.++-....++|||
T Consensus 96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~~~~ig 175 (224)
T d2hsza1 96 LYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVG 175 (224)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHC
T ss_conf 68899999999850687420213452889999998649634214311233345443210135789988643110020211
Q ss_pred CCCCCHHHHHHCCE-EEEEECC--CCCHHHHHHCCEEEECCCHHHHHHHH
Q ss_conf 89369998871993-5996149--72288985357999479933699999
Q 002770 759 DGINDAPSLALADV-GIALQIE--AQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 759 Dg~ND~~al~~Adv-gIa~~~~--~~~~~a~~~adivl~~~~l~~i~~~i 805 (883)
|..+|+.+-+.|++ .|.+..+ ...+.....+|+++ +++..+++++
T Consensus 176 D~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v--~~l~dL~~ii 223 (224)
T d2hsza1 176 DSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIF--DDFADILKIT 223 (224)
T ss_dssp SSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEE--SSGGGGGGGT
T ss_pred CCHHHHHHHHHCCCEEEEEECCCCCCCHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 76989999999099599991799983406666999998--9999998863
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.59 E-value=2.2e-05 Score=53.97 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=67.4
Q ss_pred CCCHHHHHHHHHHHHCCCCC-------CCCCCCCCCCCCEEEEEE------CC--EEEEECCHHHHHHHHHCCCCCCHHH
Q ss_conf 69969999999989569999-------777671001586389999------89--9999537889999851069980125
Q 002770 581 ATHPIAKAIVNKAESLNLTS-------PITRGQLAEPGFGILGEV------DG--RLVAVGTLEWVYERFQKQGDHSDVQ 645 (883)
Q Consensus 581 ~~hpi~~Ai~~~a~~~~~~~-------~~~~~~~~~~g~gi~~~~------~~--~~~~~G~~~~i~~~~~~~~~~~~~~ 645 (883)
..+|.+.|++.++...+.+. +....+.+...+.....+ ++ ..+.||+|+.++++|..........
T Consensus 64 ~GdptE~ALl~~a~~~~~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~ 143 (214)
T d1q3ia_ 64 AGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEI 143 (214)
T ss_dssp CSCHHHHHHHHHHHHHHSCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEE
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEECCCHHHHHHHHHHEEECCCEE
T ss_conf 66859999999999959899999863828646855788877899997267887434785278899998634353489530
Q ss_pred HHHH-HHHHHCCCCCCCCCCCCEEEEEEE-----------------------CCCEEEEEEEECCCCCHH
Q ss_conf 6789-975100234696779982999996-----------------------595589999935879864
Q 002770 646 HLEH-AVTHQSSELASPSNYSKSVVYVGR-----------------------EGEGIIGAIAISDSLRHD 691 (883)
Q Consensus 646 ~~~~-~~~~~~~~~~~~~~~g~~~~~~a~-----------------------~~~~~iG~i~l~D~lr~~ 691 (883)
.+.+ ..+.+......++..|.+++.+|+ ++++|+|++++.||||++
T Consensus 144 ~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 144 PLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred ECHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEEEECCCCC
T ss_conf 0238899999999999740876899999986583225554545701454221798998999988089899
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=0.0013 Score=40.80 Aligned_cols=118 Identities=19% Similarity=0.252 Sum_probs=80.2
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHH---------------HHHHHHHCCCCCCEE-EEEC---------------
Q ss_conf 798649999999977997999993996999---------------999999909998649-9803---------------
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEA---------------VAATAKEVGIGKEYI-NSSL--------------- 735 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~---------------a~~ia~~~gi~~~~v-~~~~--------------- 735 (883)
.+-+++.++++.|+++|+++.++|..+... ........|+..+.+ ++..
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cp~~p~~~~~~~~~~~~~ 106 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEEFRQVCDC 106 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCBTTCSSGGGBSCCSS
T ss_pred EECCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCC
T ss_conf 68878999999986618416666422023556667876540101244555540134454056553334665533345555
Q ss_pred ---CCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEE--EEEECCCC-CHHHHHHCCEEEECCCHHHHHHHHH
Q ss_conf ---90015999999844699389994893699988719935--99614972-2889853579994799336999999
Q 002770 736 ---TPQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADVG--IALQIEAQ-ENAASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 736 ---~p~~K~~~i~~l~~~g~~v~~vGDg~ND~~al~~Advg--Ia~~~~~~-~~~a~~~adivl~~~~l~~i~~~i~ 806 (883)
.|..-...++.+.-..+.+.||||..+|..|-+.|+++ +.+..+.+ .+.....||+++ +++..++++++
T Consensus 107 rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~--~~l~dl~~~ik 181 (182)
T d2gmwa1 107 RKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVL--NSLADLPQAIK 181 (182)
T ss_dssp STTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEE--SCGGGHHHHHH
T ss_pred CCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHC
T ss_conf 6874322310122116553445122798999999998288847998999777721024798898--99999999963
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.56 E-value=0.00079 Score=42.35 Aligned_cols=118 Identities=18% Similarity=0.281 Sum_probs=82.8
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC--CEEEEE-----CCCCC--HHHHHHHHHHCCCEEEEE
Q ss_conf 798649999999977997999993996999999999909998--649980-----39001--599999984469938999
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-----LTPQQ--KSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p~~--K~~~i~~l~~~g~~v~~v 757 (883)
++.|++.++++.|+ .|++++++|+..........+.+|+.. +.+++. ..|+- =...++.+.-....++||
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~l~~~p~~~l~v 178 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYV 178 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHTBCTTSHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHH-CCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 51006999998764-03760366213221101110123322100223333222232213577887776406643126456
Q ss_pred CCC-CCCHHHHHHCCEE-EEEECCCCCHHHHHHCCEEEECCCHHHHHHHHHH
Q ss_conf 489-3699988719935-9961497228898535799947993369999999
Q 002770 758 GDG-INDAPSLALADVG-IALQIEAQENAASTAASIILLGNKLSQVVDALDL 807 (883)
Q Consensus 758 GDg-~ND~~al~~Advg-Ia~~~~~~~~~a~~~adivl~~~~l~~i~~~i~~ 807 (883)
||. .+|+.+-+.+++. +.+............+|+++ +++..++++++.
T Consensus 179 gD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i--~~l~el~~~l~~ 228 (230)
T d1x42a1 179 GDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIV--SDLREVIKIVDE 228 (230)
T ss_dssp ESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEE--SSTTHHHHHHHH
T ss_pred ECCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEE--CCHHHHHHHHHH
T ss_conf 21748679999985998999889998701045899998--899999999997
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.53 E-value=0.00018 Score=47.12 Aligned_cols=113 Identities=14% Similarity=0.167 Sum_probs=81.1
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC--CEEEEE-----CCC--CCHHHHHHHHHHCCCEEEEE
Q ss_conf 798649999999977997999993996999999999909998--649980-----390--01599999984469938999
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-----LTP--QQKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~--~~v~~~-----~~p--~~K~~~i~~l~~~g~~v~~v 757 (883)
++.|++.++++.|++.|+++.++|+.+...+..+.+.+|+.. +.+++. ..| +--...++.+.-..+.++||
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~~~~~~l~i 167 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVAL 167 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEE
T ss_pred CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHCEEE
T ss_conf 45632799988754034552213321000111222222333222222232322210145789999999729995130899
Q ss_pred CCCCCCHHHHHHCCE-EEEEECCCC-CHHHHHHCCEEEECCCHHHH
Q ss_conf 489369998871993-599614972-28898535799947993369
Q 002770 758 GDGINDAPSLALADV-GIALQIEAQ-ENAASTAASIILLGNKLSQV 801 (883)
Q Consensus 758 GDg~ND~~al~~Adv-gIa~~~~~~-~~~a~~~adivl~~~~l~~i 801 (883)
||..+|+.+-+.+++ .|++..... .+.....||+++ +++..+
T Consensus 168 gD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i--~~l~el 211 (218)
T d1te2a_ 168 EDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKL--SSLTEL 211 (218)
T ss_dssp ESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEEC--SCGGGC
T ss_pred EECHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCCEEE--CCHHHC
T ss_conf 60989999999839979998998776662235899998--992669
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.11 E-value=0.00059 Score=43.29 Aligned_cols=116 Identities=16% Similarity=0.154 Sum_probs=80.7
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC--CEEE-EECCCCCHH----HHHHHHHHCCCEEEEECC
Q ss_conf 798649999999977997999993996999999999909998--6499-803900159----999998446993899948
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYIN-SSLTPQQKS----EVISTLQTSGHHVAMVGD 759 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~--~~v~-~~~~p~~K~----~~i~~l~~~g~~v~~vGD 759 (883)
++.+++.+.++.|+..+ ++.++|+.+...+..+.+.+|+.. +.++ +.-.+..|. ..++.++-..+.++||||
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGD 162 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGD 162 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred CCHHHHHHHHHHHHCCC-CHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECC
T ss_conf 21068999875420134-10000233210115778750123320000222322222333211012332012001646547
Q ss_pred CCCCHHHHHHCCE-EEEEECC--CCCHHHHHHCCEEEECCCHHHHHHHH
Q ss_conf 9369998871993-5996149--72288985357999479933699999
Q 002770 760 GINDAPSLALADV-GIALQIE--AQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 760 g~ND~~al~~Adv-gIa~~~~--~~~~~a~~~adivl~~~~l~~i~~~i 805 (883)
+.+|+.|-+.|++ .|++..+ ...+.....+|+++ +++..+...+
T Consensus 163 s~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi--~~l~el~~~l 209 (210)
T d2ah5a1 163 TKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIA--HKPLEVLAYF 209 (210)
T ss_dssp SHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEE--SSTTHHHHHT
T ss_pred CHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCEEE--CCHHHHHHHH
T ss_conf 7789999998599399985798997789768999998--9999999985
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.01 E-value=0.0068 Score=35.38 Aligned_cols=118 Identities=14% Similarity=0.161 Sum_probs=81.9
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC--CEEEEE-CCCCCH------HHHHHHHHHCCCEEEEE
Q ss_conf 798649999999977997999993996999999999909998--649980-390015------99999984469938999
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-LTPQQK------SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~--~~v~~~-~~p~~K------~~~i~~l~~~g~~v~~v 757 (883)
.+.+++.++++.|++ |+++.++|+.+........+..|+.. +.++.. ..+..| ..+.+.+.-..+.++||
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~i 187 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMV 187 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCCCCHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEE
T ss_conf 658348999998411-4606886223200123333202222222222322222210033324788999960287752420
Q ss_pred CCCC-CCHHHHHHCCEE-EEEECCCC--CHHHHHHCCEEEECCCHHHHHHHHHH
Q ss_conf 4893-699988719935-99614972--28898535799947993369999999
Q 002770 758 GDGI-NDAPSLALADVG-IALQIEAQ--ENAASTAASIILLGNKLSQVVDALDL 807 (883)
Q Consensus 758 GDg~-ND~~al~~Advg-Ia~~~~~~--~~~a~~~adivl~~~~l~~i~~~i~~ 807 (883)
||.. +|+.+-+.+++. +......+ .......+|+++ +++..+..+++.
T Consensus 188 GD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i--~~l~eL~~ll~~ 239 (247)
T d2gfha1 188 GDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMV--SSVLELPALLQS 239 (247)
T ss_dssp ESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEE--SSGGGHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHHHHH
T ss_conf 3571867999998399499997799887643357999898--999999999999
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.0012 Score=41.03 Aligned_cols=48 Identities=19% Similarity=0.279 Sum_probs=35.7
Q ss_pred CHHHHHHHHHH-CCCEEEEECC----CCCCHHHHHHCC-EEEEEECCCCCHHHHHHC
Q ss_conf 15999999844-6993899948----936999887199-359961497228898535
Q 002770 739 QKSEVISTLQT-SGHHVAMVGD----GINDAPSLALAD-VGIALQIEAQENAASTAA 789 (883)
Q Consensus 739 ~K~~~i~~l~~-~g~~v~~vGD----g~ND~~al~~Ad-vgIa~~~~~~~~~a~~~a 789 (883)
+|...++.|.. ..+.++++|| |.||.+||+.|+ .|+++ ++.. .+++.+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v--~~~~-~~~~~~ 238 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV--TAPE-DTRRIC 238 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC--SSHH-HHHHHH
T ss_pred CHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCCCCCEEEE--CCHH-HHHHHH
T ss_conf 78999999848993629998689999997699997159729990--7999-999999
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.0019 Score=39.46 Aligned_cols=114 Identities=16% Similarity=0.135 Sum_probs=77.8
Q ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC-----EEEE---ECCCC--CHHHHHHHHHHCCCEE
Q ss_conf 587986499999999779979999939969999999999099986-----4998---03900--1599999984469938
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE-----YINS---SLTPQ--QKSEVISTLQTSGHHV 754 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~-----~v~~---~~~p~--~K~~~i~~l~~~g~~v 754 (883)
.-.+.|++.+.+++|++.|+++.++|+............+|+..- ..+. ...|+ -=....+.+.-..+.+
T Consensus 125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p~~~ 204 (253)
T d1zs9a1 125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCSTNNI 204 (253)
T ss_dssp CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCGGGE
T ss_pred CCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCHHHHHCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCE
T ss_conf 36668878999999864247544458984889999999728404332023330245335778088899999948996748
Q ss_pred EEECCCCCCHHHHHHCCEEEEEE---CCCCCHHHHHHCCEEEECCCHHH
Q ss_conf 99948936999887199359961---49722889853579994799336
Q 002770 755 AMVGDGINDAPSLALADVGIALQ---IEAQENAASTAASIILLGNKLSQ 800 (883)
Q Consensus 755 ~~vGDg~ND~~al~~AdvgIa~~---~~~~~~~a~~~adivl~~~~l~~ 800 (883)
+||||..+|+.+-++|++....- +..........++.++. +|..
T Consensus 205 l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~--sl~E 251 (253)
T d1zs9a1 205 LFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLIT--SFSE 251 (253)
T ss_dssp EEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEES--SGGG
T ss_pred EEEECCHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCCCCEEC--CHHH
T ss_conf 9994799999999985997999968998998634457881799--8688
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.73 E-value=0.0011 Score=41.22 Aligned_cols=109 Identities=14% Similarity=0.222 Sum_probs=75.1
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC--CEEEEE-------CCCCCHHHHHHHHHHCCCEEEEEC
Q ss_conf 98649999999977997999993996999999999909998--649980-------390015999999844699389994
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-------LTPQQKSEVISTLQTSGHHVAMVG 758 (883)
Q Consensus 688 lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~i~~l~~~g~~v~~vG 758 (883)
+.|++.++++.|++.|+++.++|+... .+..+.+.+|+.. +.+++. -.|+--..+++.+.-..+.++|||
T Consensus 83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~Vg 161 (204)
T d2go7a1 83 LMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIG 161 (204)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGEEEEE
T ss_pred CCCHHHHHHHCCCCCCCCHHHHCCCCH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 563477654211022220022113510-3344333101221222222222344320257888999998299975189994
Q ss_pred CCCCCHHHHHHCCE-EEEEECCCCCHHHHHHCCEEEECCCHHHHHHHH
Q ss_conf 89369998871993-599614972288985357999479933699999
Q 002770 759 DGINDAPSLALADV-GIALQIEAQENAASTAASIILLGNKLSQVVDAL 805 (883)
Q Consensus 759 Dg~ND~~al~~Adv-gIa~~~~~~~~~a~~~adivl~~~~l~~i~~~i 805 (883)
|..+|..+-+.+++ .|.+ ..+.. .++..+ +++..+..++
T Consensus 162 D~~~Di~~A~~~G~~~i~v--~~~~~----~~~~~~--~~~~dl~~l~ 201 (204)
T d2go7a1 162 DRTLDVEFAQNSGIQSINF--LESTY----EGNHRI--QALADISRIF 201 (204)
T ss_dssp SSHHHHHHHHHHTCEEEES--SCCSC----TTEEEC--SSTTHHHHHT
T ss_pred CCHHHHHHHHHCCCEEEEE--CCCCC----CCCEEC--CCHHHHHHHH
T ss_conf 7989999999869969998--47999----958004--8998999986
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.66 E-value=0.0006 Score=43.25 Aligned_cols=113 Identities=12% Similarity=0.188 Sum_probs=77.8
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC--EEEEE-------CCCCCHHHHHHHHHHCCCEEEEEC
Q ss_conf 986499999999779979999939969999999999099986--49980-------390015999999844699389994
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINSS-------LTPQQKSEVISTLQTSGHHVAMVG 758 (883)
Q Consensus 688 lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~--~v~~~-------~~p~~K~~~i~~l~~~g~~v~~vG 758 (883)
+.|++.+.++.|++ ++++.++|+.....+..+.+++|+..- .+++. -.|+--...++.++-..+.++|||
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~Vg 161 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIG 161 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCCCHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCEEEEC
T ss_conf 46403444332014-55420002321111111112222222222222222222210344430023421045113406854
Q ss_pred CCCCCHHHHHHCCEEEEE-ECCCCCHHHHHHCCEEEECCCHHHHHH
Q ss_conf 893699988719935996-149722889853579994799336999
Q 002770 759 DGINDAPSLALADVGIAL-QIEAQENAASTAASIILLGNKLSQVVD 803 (883)
Q Consensus 759 Dg~ND~~al~~AdvgIa~-~~~~~~~~a~~~adivl~~~~l~~i~~ 803 (883)
|..+|+.+-+.|++.... ..+..+....+.+|.++ +++..|.+
T Consensus 162 Ds~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i--~~l~dll~ 205 (207)
T d2hdoa1 162 DSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRF--QKPLDILE 205 (207)
T ss_dssp SSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEE--SSGGGGGG
T ss_pred CCHHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCEE--CCHHHHHH
T ss_conf 778789999984992999935889756765329274--89999985
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0054 Score=36.14 Aligned_cols=90 Identities=11% Similarity=0.061 Sum_probs=66.9
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCC-HHHHHHHHHHCCCCCC--EEEEECCCCCH--HHHHHHHHHCCCEEEEECCCC
Q ss_conf 798649999999977997999993996-9999999999099986--49980390015--999999844699389994893
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDR-EEAVAATAKEVGIGKE--YINSSLTPQQK--SEVISTLQTSGHHVAMVGDGI 761 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~-~~~a~~ia~~~gi~~~--~v~~~~~p~~K--~~~i~~l~~~g~~v~~vGDg~ 761 (883)
++.|++.+.++.|++.|+++.++|+.+ ...+....+..++... .+...-.|..+ ..+.+.+.-..+.++||||..
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~l~igD~~ 125 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPGSKVTHFERLHHKTGVPFSQMVFFDDEN 125 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESCH
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHCCCHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHEEEECCCH
T ss_conf 60557999999999789948997356621010000000233332102322668976999999999688869979874878
Q ss_pred CCHHHHHHCCE-EEEE
Q ss_conf 69998871993-5996
Q 002770 762 NDAPSLALADV-GIAL 776 (883)
Q Consensus 762 ND~~al~~Adv-gIa~ 776 (883)
.|+.+-+.|++ .|.+
T Consensus 126 ~di~aA~~aG~~~i~v 141 (164)
T d1u7pa_ 126 RNIIDVGRLGVTCIHI 141 (164)
T ss_dssp HHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHCCCEEEEE
T ss_conf 7899999869979997
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.49 E-value=0.0099 Score=34.16 Aligned_cols=124 Identities=16% Similarity=0.204 Sum_probs=70.7
Q ss_pred EEEECCCCCHHHHHHHHHHHHCCCEEEEECCC------------CHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHH
Q ss_conf 99935879864999999997799799999399------------699999999990999864998039001599999984
Q 002770 681 AIAISDSLRHDAEHTVRSLQQKGIKTLLLSGD------------REEAVAATAKEVGIGKEYINSSLTPQQKSEVISTLQ 748 (883)
Q Consensus 681 ~i~l~D~lr~~~~~~i~~L~~~gi~~~ilTGd------------~~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~i~~l~ 748 (883)
.++...............+.+.+...+....| .......+....|......+..-.|.--....+.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~ 199 (261)
T d1vjra_ 120 VLGFDKTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFG 199 (261)
T ss_dssp EECCCTTCCHHHHHHHHHHHTTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHT
T ss_pred EECCCCCCCHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 74577653468899998875037401224677545578871414520667776531321213667995788888876640
Q ss_pred HCCCEEEEECCCC-CCHHHHHHCCE-EEEEECCCCCHHHHH----HCCEEEECCCHHHHHHHHH
Q ss_conf 4699389994893-69998871993-599614972288985----3579994799336999999
Q 002770 749 TSGHHVAMVGDGI-NDAPSLALADV-GIALQIEAQENAAST----AASIILLGNKLSQVVDALD 806 (883)
Q Consensus 749 ~~g~~v~~vGDg~-ND~~al~~Adv-gIa~~~~~~~~~a~~----~adivl~~~~l~~i~~~i~ 806 (883)
-..+.++||||.. +|+.+-+.|++ +|.+..|.......+ .+|+++ +++..|.++++
T Consensus 200 ~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii--~~l~eL~~~l~ 261 (261)
T d1vjra_ 200 VPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVF--KNLGELAKAVQ 261 (261)
T ss_dssp CCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEE--SSHHHHHHHHC
T ss_pred CCCHHCCEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEE--CCHHHHHHHHC
T ss_conf 472211031687167899999879969998989998778863689998998--89999999769
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.49 E-value=0.0028 Score=38.23 Aligned_cols=93 Identities=11% Similarity=0.048 Sum_probs=50.5
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCC-----------------------CCCCCCCCEEEEEE----C-------CEEEEECC
Q ss_conf 99699999999895699997776-----------------------71001586389999----8-------99999537
Q 002770 582 THPIAKAIVNKAESLNLTSPITR-----------------------GQLAEPGFGILGEV----D-------GRLVAVGT 627 (883)
Q Consensus 582 ~hpi~~Ai~~~a~~~~~~~~~~~-----------------------~~~~~~g~gi~~~~----~-------~~~~~~G~ 627 (883)
..|.+.|++.++.+.++...... .+.+.+.+.....+ + ...|.||+
T Consensus 78 G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGA 157 (239)
T d1wpga3 78 GEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGA 157 (239)
T ss_dssp SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEEC
T ss_pred CCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHCCCHHHHHHHCEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEECC
T ss_conf 89980799999999399757863243033320111455653707888600656627899987489986663159998487
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHH-HHHCCCCC--CCCCCCCEEEEEEEC
Q ss_conf 889999851069980125678997-51002346--967799829999965
Q 002770 628 LEWVYERFQKQGDHSDVQHLEHAV-THQSSELA--SPSNYSKSVVYVGRE 674 (883)
Q Consensus 628 ~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~a~~ 674 (883)
|+.++++|...........+.... +.+..... ..+.+|.+++.+|+.
T Consensus 158 pe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k 207 (239)
T d1wpga3 158 PEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATR 207 (239)
T ss_dssp HHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEE
T ss_pred HHHHHHHCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf 49999736234439926309999999999999998675378889999999
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.39 E-value=0.0033 Score=37.75 Aligned_cols=119 Identities=16% Similarity=0.127 Sum_probs=72.9
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCC--------H-------HHHHHHHHHCCCCCCEEEEECC---------------
Q ss_conf 798649999999977997999993996--------9-------9999999990999864998039---------------
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDR--------E-------EAVAATAKEVGIGKEYINSSLT--------------- 736 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~--------~-------~~a~~ia~~~gi~~~~v~~~~~--------------- 736 (883)
.+-|++.++++.|++.|+++.++|.-. . .......+..|+..+.++....
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPM 127 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCTTCCSTTCCSSCTT
T ss_pred EECCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCC
T ss_conf 76344899999998629757986165432144542434444336777776641355325887424644566421236640
Q ss_pred ----CCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEEECCCCCHHHHHHCCEEEEC-CCHHHHHHHHHHHH
Q ss_conf ----001599999984469938999489369998871993-59961497228898535799947-99336999999999
Q 002770 737 ----PQQKSEVISTLQTSGHHVAMVGDGINDAPSLALADV-GIALQIEAQENAASTAASIILLG-NKLSQVVDALDLAK 809 (883)
Q Consensus 737 ----p~~K~~~i~~l~~~g~~v~~vGDg~ND~~al~~Adv-gIa~~~~~~~~~a~~~adivl~~-~~l~~i~~~i~~~R 809 (883)
|..-....+.+.-....+.||||..+|..+-+.|++ +|.+..+.+. . ..+....+ .++..+.+++....
T Consensus 128 rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~~~--~--~~~~~~~~~~~~~e~~dll~~v~ 202 (209)
T d2o2xa1 128 RKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAA--V--QPGFAIRPLRDSSELGDLLAAIE 202 (209)
T ss_dssp STTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCE--E--ETTEEEEEESSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHCCCCEEEEECCCCC--C--CCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 243201566767773899412689579788999999879948999489976--5--67755467630527879999999
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.99 E-value=0.021 Score=31.67 Aligned_cols=98 Identities=12% Similarity=0.080 Sum_probs=66.4
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC--EEEEE-CCCCCH------HHHHHHHHHCCCEEEEE
Q ss_conf 7986499999999779979999939969999999999099986--49980-390015------99999984469938999
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINSS-LTPQQK------SEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~--~v~~~-~~p~~K------~~~i~~l~~~g~~v~~v 757 (883)
++.+++.+.++.|++.|+++.++|+.+.... ...+..++... .+++. .....| ....+.+. .+.+.||
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~--~~~~l~v 155 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQ--ISSGLVI 155 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTT--CSSEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC--CCCEEEE
T ss_conf 0244268888877764212233455762101-345542022122221222223456888999999999849--9976999
Q ss_pred CCCCCCHHHHHHCCEE-EEEECCCCCHHHHHHCC
Q ss_conf 4893699988719935-99614972288985357
Q 002770 758 GDGINDAPSLALADVG-IALQIEAQENAASTAAS 790 (883)
Q Consensus 758 GDg~ND~~al~~Advg-Ia~~~~~~~~~a~~~ad 790 (883)
||..+|+.+-+.|++- |.+ .+....++..|
T Consensus 156 gDs~~Di~aA~~aG~~~i~v---~~~~~~~~~~d 186 (187)
T d2fi1a1 156 GDRPIDIEAGQAAGLDTHLF---TSIVNLRQVLD 186 (187)
T ss_dssp ESSHHHHHHHHHTTCEEEEC---SCHHHHHHHHT
T ss_pred ECCHHHHHHHHHCCCEEEEE---CCCCCHHHHCC
T ss_conf 07999999999859979999---99887475357
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.89 E-value=0.0077 Score=34.96 Aligned_cols=115 Identities=15% Similarity=0.180 Sum_probs=80.9
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC--CEEEEE-C----CC--CCHHHHHHHHHHCCCEEEEEC
Q ss_conf 98649999999977997999993996999999999909998--649980-3----90--015999999844699389994
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-L----TP--QQKSEVISTLQTSGHHVAMVG 758 (883)
Q Consensus 688 lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~--~~v~~~-~----~p--~~K~~~i~~l~~~g~~v~~vG 758 (883)
+.+++.+.++.+++.|+++.++|+..........+..++.. +.+++. . .| +-=...++.+.-..+.++|||
T Consensus 94 ~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~e~l~Vg 173 (220)
T d1zrna_ 94 PFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVA 173 (220)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEEE
T ss_pred CCCHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 12010789998875178577642117999999874114455321002221000145077889999998177871489980
Q ss_pred CCCCCHHHHHHCCEE-EEEE-CCCCCHHHHHHCCEEEECCCHHHHHHH
Q ss_conf 893699988719935-9961-497228898535799947993369999
Q 002770 759 DGINDAPSLALADVG-IALQ-IEAQENAASTAASIILLGNKLSQVVDA 804 (883)
Q Consensus 759 Dg~ND~~al~~Advg-Ia~~-~~~~~~~a~~~adivl~~~~l~~i~~~ 804 (883)
|..+|+.+-+.|++- +.+. .+...+.....+|+++ +++..++++
T Consensus 174 D~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i--~~l~el~~l 219 (220)
T d1zrna_ 174 SNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEV--TSLRAVVEL 219 (220)
T ss_dssp SCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEE--SSHHHHHTT
T ss_pred CCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEE--CCHHHHHHH
T ss_conf 4837699999869979998179987643368999998--999999854
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.68 E-value=0.019 Score=32.10 Aligned_cols=117 Identities=14% Similarity=0.158 Sum_probs=64.6
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCC-------------HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHH
Q ss_conf 9999358798649999999977997999993996-------------999999999909998649980390015999999
Q 002770 680 GAIAISDSLRHDAEHTVRSLQQKGIKTLLLSGDR-------------EEAVAATAKEVGIGKEYINSSLTPQQKSEVIST 746 (883)
Q Consensus 680 G~i~l~D~lr~~~~~~i~~L~~~gi~~~ilTGd~-------------~~~a~~ia~~~gi~~~~v~~~~~p~~K~~~i~~ 746 (883)
.+.++.......-......+.+.+ ...++|... ......+....|... ..++.-+|+--....+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~gKP~p~~~~~al~~ 192 (253)
T d1wvia_ 115 VVVGLDTNLTYEKLTLATLAIQKG-AVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKP-IIIGKPEAVIMNKALDR 192 (253)
T ss_dssp EEECCCTTCBHHHHHHHHHHHHTT-CEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCC-EECSTTSHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHC-CCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCEE-EEECCCCCCCCEEHHHH
T ss_conf 898547876788887776666522-5511679996347688630467732101233333304-78416774200110011
Q ss_pred HHHCCCEEEEECCCCC-CHHHHHHCCE-EEEEECCCCCH-HHHHH---CCEEEECCCHHH
Q ss_conf 8446993899948936-9998871993-59961497228-89853---579994799336
Q 002770 747 LQTSGHHVAMVGDGIN-DAPSLALADV-GIALQIEAQEN-AASTA---ASIILLGNKLSQ 800 (883)
Q Consensus 747 l~~~g~~v~~vGDg~N-D~~al~~Adv-gIa~~~~~~~~-~a~~~---adivl~~~~l~~ 800 (883)
+.-..+.++||||..+ |+.+-+.|++ +|.+..|.... ..... .|+++ +++..
T Consensus 193 l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi--~sl~e 250 (253)
T d1wvia_ 193 LGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVL--SSLAE 250 (253)
T ss_dssp HTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEE--SCGGG
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEE--CCHHH
T ss_conf 03454516998278077799999879979998989999788863689998898--99777
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.66 E-value=0.019 Score=32.02 Aligned_cols=81 Identities=16% Similarity=0.173 Sum_probs=46.2
Q ss_pred HHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCCC-CHHHHHHCCE-EEEEECCCCCHHHHH----HCCE
Q ss_conf 999999099986499803900159999998446993899948936-9998871993-599614972288985----3579
Q 002770 718 AATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGIN-DAPSLALADV-GIALQIEAQENAAST----AASI 791 (883)
Q Consensus 718 ~~ia~~~gi~~~~v~~~~~p~~K~~~i~~l~~~g~~v~~vGDg~N-D~~al~~Adv-gIa~~~~~~~~~a~~----~adi 791 (883)
.......+.. ......-.|+--..+.+.+.-..+.++||||..+ |+.+.++|++ +|.+..|..+....+ .+|+
T Consensus 161 ~~~~~~~~~~-~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~ 239 (250)
T d2c4na1 161 AGIEKISGRK-PFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSW 239 (250)
T ss_dssp HHHHHHHCCC-CEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSE
T ss_pred HHHHHHHCCC-CHHCCCCHHHHHHHHHHHHCCCCHHEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCE
T ss_conf 8998750210-000134204667666666327803457846872779999998799899989999998899737899999
Q ss_pred EEECCCHHHH
Q ss_conf 9947993369
Q 002770 792 ILLGNKLSQV 801 (883)
Q Consensus 792 vl~~~~l~~i 801 (883)
++. ++..|
T Consensus 240 i~~--sl~eL 247 (250)
T d2c4na1 240 IYP--SVAEI 247 (250)
T ss_dssp EES--SGGGC
T ss_pred EEC--CHHHH
T ss_conf 989--97893
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.50 E-value=0.025 Score=31.12 Aligned_cols=105 Identities=10% Similarity=0.066 Sum_probs=71.0
Q ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC--EEEEE-----CCCCC--HHHHHHHHHHCCCEEE
Q ss_conf 587986499999999779979999939969999999999099986--49980-----39001--5999999844699389
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE--YINSS-----LTPQQ--KSEVISTLQTSGHHVA 755 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~--~v~~~-----~~p~~--K~~~i~~l~~~g~~v~ 755 (883)
..++-|++.+.++.|++.|+++.++|+... +....+..|+..- .+.+. ..|+- =....+.+.-..+.++
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~~~i~~~~~l 166 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESI 166 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHHTTCCGGGEE
T ss_pred CCCCCCCCEECCCCCCCCCCCEEEEEECCH--HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
T ss_conf 220258740102212224442489963231--357887635664333111111111123575888888987398874079
Q ss_pred EECCCCCCHHHHHHCCE-EEEEECCCCCHHHHHHCCEEEEC
Q ss_conf 99489369998871993-59961497228898535799947
Q 002770 756 MVGDGINDAPSLALADV-GIALQIEAQENAASTAASIILLG 795 (883)
Q Consensus 756 ~vGDg~ND~~al~~Adv-gIa~~~~~~~~~a~~~adivl~~ 795 (883)
||||..+|+.+-+.|++ .|++ +.+ .....++.++.+
T Consensus 167 ~VgD~~~di~~A~~aG~~~i~v--~~~--~~~~~~~~~~~~ 203 (221)
T d1o08a_ 167 GLEDSQAGIQAIKDSGALPIGV--GRP--EDLGDDIVIVPD 203 (221)
T ss_dssp EEESSHHHHHHHHHHTCEEEEE--SCH--HHHCSSSEEESS
T ss_pred EEECCHHHHHHHHHCCCEEEEE--CCH--HHCCCCCEECCC
T ss_conf 9966988899999869989999--981--124656477588
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.46 E-value=0.066 Score=28.00 Aligned_cols=115 Identities=20% Similarity=0.305 Sum_probs=75.8
Q ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECC--------------------------------
Q ss_conf 864999999997799799999399699999999990999864998039--------------------------------
Q 002770 689 RHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKEYINSSLT-------------------------------- 736 (883)
Q Consensus 689 r~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~~v~~~~~-------------------------------- 736 (883)
-|++.++++.+++. ...+++|-.-.+-..++++.+|++.+..+.+++
T Consensus 83 vpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~eel~e~ 161 (308)
T d1y8aa1 83 VPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEELFRK 161 (308)
T ss_dssp CTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred CCCHHHHHHHHHHH-CCCEEEECCHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 68889999999864-88479853589999999853588740100234431247871779999887653037537788999
Q ss_pred ---------------------CCCHHHHHHHHHH--CCCEEEEECCCCCCHHHHHHC----CEEEEEECCCCCHHHHHHC
Q ss_conf ---------------------0015999999844--699389994893699988719----9359961497228898535
Q 002770 737 ---------------------PQQKSEVISTLQT--SGHHVAMVGDGINDAPSLALA----DVGIALQIEAQENAASTAA 789 (883)
Q Consensus 737 ---------------------p~~K~~~i~~l~~--~g~~v~~vGDg~ND~~al~~A----dvgIa~~~~~~~~~a~~~a 789 (883)
-..|..+++..-. .-...++|||.+.|..+|+.+ ++.|+. +|.+-+...|
T Consensus 162 ~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsF---NGN~Yal~eA 238 (308)
T d1y8aa1 162 LDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF---NGNEYALKHA 238 (308)
T ss_dssp HHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE---SCCHHHHTTC
T ss_pred HHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHCCCCEEEEE---CCCCCCCCCC
T ss_conf 9987131157668764021478516789986336126986412367533278999974479836885---6862444534
Q ss_pred CEEEECCCHHHHHHHHHH
Q ss_conf 799947993369999999
Q 002770 790 SIILLGNKLSQVVDALDL 807 (883)
Q Consensus 790 divl~~~~l~~i~~~i~~ 807 (883)
++.+.+.+...+..++++
T Consensus 239 ~VaiiS~~~~a~~~i~dl 256 (308)
T d1y8aa1 239 DVVIISPTAMSEAKVIEL 256 (308)
T ss_dssp SEEEECSSTHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHH
T ss_conf 468966633578899999
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.96 E-value=0.052 Score=28.78 Aligned_cols=99 Identities=15% Similarity=0.210 Sum_probs=68.0
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECC----CCHHHHHHHHHHCCCCC--CEEEEE-------CCCCCHHHHHHHHHHCCCE
Q ss_conf 7986499999999779979999939----96999999999909998--649980-------3900159999998446993
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSG----DREEAVAATAKEVGIGK--EYINSS-------LTPQQKSEVISTLQTSGHH 753 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTG----d~~~~a~~ia~~~gi~~--~~v~~~-------~~p~~K~~~i~~l~~~g~~ 753 (883)
.+.+++.+.++.|+++|+++.++|+ .............|+.. +.+++. -.|+--...++.++-..+.
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~v~p~~ 176 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNE 176 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHTSCTTS
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHCEEEEHHHCCCCCCCHHHHHHHHHHHCCCCCE
T ss_conf 88800999999998659945775201111189999999874680755111000544137799827777888872898632
Q ss_pred EEEECCCCCCHHHHHHCCE-EEEEECCCCCHHHHH
Q ss_conf 8999489369998871993-599614972288985
Q 002770 754 VAMVGDGINDAPSLALADV-GIALQIEAQENAAST 787 (883)
Q Consensus 754 v~~vGDg~ND~~al~~Adv-gIa~~~~~~~~~a~~ 787 (883)
++||||...|+.+-+.+++ +|.+ .++.+...+
T Consensus 177 ~l~IgD~~~Di~~A~~aG~~ti~V--~~~~~~~~e 209 (222)
T d1cr6a1 177 VVFLDDFGSNLKPARDMGMVTILV--HNTASALRE 209 (222)
T ss_dssp EEEEESSSTTTHHHHHHTCEEEEC--CSSSHHHHH
T ss_pred EEEEECCHHHHHHHHHCCCEEEEE--CCCCHHHHH
T ss_conf 899977988799999859989998--994048999
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.91 E-value=0.033 Score=30.24 Aligned_cols=92 Identities=10% Similarity=0.009 Sum_probs=61.4
Q ss_pred CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHH----HHHH-------HHCCCCCCEEEEEC------CCCCHHHHHHHH
Q ss_conf 587986499999999779979999939969999----9999-------99099986499803------900159999998
Q 002770 685 SDSLRHDAEHTVRSLQQKGIKTLLLSGDREEAV----AATA-------KEVGIGKEYINSSL------TPQQKSEVISTL 747 (883)
Q Consensus 685 ~D~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a----~~ia-------~~~gi~~~~v~~~~------~p~~K~~~i~~l 747 (883)
.+.+.|++.+.++.|++.|.+++++|+.+.... ..+. ...++.....+.+- .+.-|......+
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~k~~~l~~~ 113 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQREQGDTRKDDVVKEEIFWKH 113 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH
T ss_conf 08448789999999984448089992685788999999999975013335798679863255556677048789999973
Q ss_pred HHCCC-EEEEECCCCCCHHHHHHCCE-EEEE
Q ss_conf 44699-38999489369998871993-5996
Q 002770 748 QTSGH-HVAMVGDGINDAPSLALADV-GIAL 776 (883)
Q Consensus 748 ~~~g~-~v~~vGDg~ND~~al~~Adv-gIa~ 776 (883)
...+. .++|+||...|+.|.+.+++ .+.+
T Consensus 114 ~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V 144 (149)
T d1ltqa1 114 IAPHFDVKLAIDDRTQVVEMWRRIGVECWQV 144 (149)
T ss_dssp TTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHCCCCEEEE
T ss_conf 2577755999869789999999879968971
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=94.85 E-value=0.0038 Score=37.23 Aligned_cols=81 Identities=15% Similarity=0.142 Sum_probs=45.6
Q ss_pred HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCEEEEECCCC-CCHHHHHHCCE-EEEEECC--CCCH--HHHHHCC
Q ss_conf 999999909998649980390015999999844699389994893-69998871993-5996149--7228--8985357
Q 002770 717 VAATAKEVGIGKEYINSSLTPQQKSEVISTLQTSGHHVAMVGDGI-NDAPSLALADV-GIALQIE--AQEN--AASTAAS 790 (883)
Q Consensus 717 a~~ia~~~gi~~~~v~~~~~p~~K~~~i~~l~~~g~~v~~vGDg~-ND~~al~~Adv-gIa~~~~--~~~~--~a~~~ad 790 (883)
....-...|... .....-.|+--....+.+.-..+.++||||+. +|+.+.+.|++ +|.+..| ...+ .....+|
T Consensus 164 ~~~~~~~~~~~~-~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd 242 (253)
T d1yv9a1 164 VTFVETATQTKP-VYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPT 242 (253)
T ss_dssp HHHHHHHHTCCC-EECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCS
T ss_pred CCCCCCCCCCEE-EEECCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCC
T ss_conf 100012234303-6513431267878999848884423784378277999999879989998989999788973689997
Q ss_pred EEEECCCHHH
Q ss_conf 9994799336
Q 002770 791 IILLGNKLSQ 800 (883)
Q Consensus 791 ivl~~~~l~~ 800 (883)
+++. ++..
T Consensus 243 ~vi~--sl~e 250 (253)
T d1yv9a1 243 YVVD--SLDE 250 (253)
T ss_dssp EEES--SGGG
T ss_pred EEEC--CHHH
T ss_conf 8979--9787
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.80 E-value=0.1 Score=26.66 Aligned_cols=115 Identities=12% Similarity=0.193 Sum_probs=77.1
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCCC---EEEEE-------CCCCC--HHHHHHHHHHCCCEE
Q ss_conf 7986499999999779979999939969999999999099986---49980-------39001--599999984469938
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGKE---YINSS-------LTPQQ--KSEVISTLQTSGHHV 754 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~~---~v~~~-------~~p~~--K~~~i~~l~~~g~~v 754 (883)
.+.+++.+.+++|+ .+..++|+.....+....+..|+..- .+++. ..|+- =....+.+.-..+.+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~~p~~~ 161 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRV 161 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred CHHHHHHHHHHHCC---CCCEEEEECCHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEE
T ss_conf 11345788765103---232256412045555543023444332100012321124434458899987787508987328
Q ss_pred EEECCCCCCHHHHHHCCE-EEEEECCCCC-----H-HHHHHCCEEEECCCHHHHHHHHH
Q ss_conf 999489369998871993-5996149722-----8-89853579994799336999999
Q 002770 755 AMVGDGINDAPSLALADV-GIALQIEAQE-----N-AASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 755 ~~vGDg~ND~~al~~Adv-gIa~~~~~~~-----~-~a~~~adivl~~~~l~~i~~~i~ 806 (883)
+||||..+|+.+-+.+++ .|++..+... + ....-+|+++ +++..++.++.
T Consensus 162 l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi--~~l~eL~~ll~ 218 (222)
T d2fdra1 162 VVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVI--SRMQDLPAVIA 218 (222)
T ss_dssp EEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEE--SCGGGHHHHHH
T ss_pred EEECCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCEEE--CCHHHHHHHHH
T ss_conf 9975878789999984998999836987875317789767999999--99999999999
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=94.27 E-value=0.023 Score=31.35 Aligned_cols=90 Identities=10% Similarity=0.154 Sum_probs=63.3
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCC--------HHH-------HHHHHHHCCCCCCEEEEE------------CCCCC
Q ss_conf 798649999999977997999993996--------999-------999999909998649980------------39001
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDR--------EEA-------VAATAKEVGIGKEYINSS------------LTPQQ 739 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~--------~~~-------a~~ia~~~gi~~~~v~~~------------~~p~~ 739 (883)
.+-|++.++++.|++.|++++++|..+ ... -.......|+..+.++.. -.|+-
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~KP~p~~ 109 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKL 109 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEEEEEEECCCGGGCCSSSTTSSGG
T ss_pred EECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCHH
T ss_conf 68755999999998738730110464300367777877654543000100123333310664143134542333642189
Q ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCE-EEEE
Q ss_conf 599999984469938999489369998871993-5996
Q 002770 740 KSEVISTLQTSGHHVAMVGDGINDAPSLALADV-GIAL 776 (883)
Q Consensus 740 K~~~i~~l~~~g~~v~~vGDg~ND~~al~~Adv-gIa~ 776 (883)
=..+++.+.-..+.+.||||...|..|-+.|++ +|.+
T Consensus 110 ~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i 147 (161)
T d2fpwa1 110 VERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRY 147 (161)
T ss_dssp GGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEEC
T ss_pred HHHHHHHCCCCHHCEEEECCCHHHHHHHHHCCCEEEEE
T ss_conf 99998761989404899899899999999869909998
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.20 E-value=0.024 Score=31.27 Aligned_cols=85 Identities=16% Similarity=0.178 Sum_probs=62.5
Q ss_pred CCHHHHHHHHHHHHCCCEEEEECCCCH----HHHHHHHHHCCCCCC----EEEEECC--CCCHHHHHHHHHHCCCEEEEE
Q ss_conf 986499999999779979999939969----999999999099986----4998039--001599999984469938999
Q 002770 688 LRHDAEHTVRSLQQKGIKTLLLSGDRE----EAVAATAKEVGIGKE----YINSSLT--PQQKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 688 lr~~~~~~i~~L~~~gi~~~ilTGd~~----~~a~~ia~~~gi~~~----~v~~~~~--p~~K~~~i~~l~~~g~~v~~v 757 (883)
+.+++.+.++.+++.|++++.+||+.. .++..+.+.+|++.. ..+.+-. .+.|...|+. ...++++
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~~~K~~rr~~Ik~----y~I~l~~ 162 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDKPGQNTKSQWLQD----KNIRIFY 162 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHH----TTEEEEE
T ss_pred CCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHH----CCEEEEE
T ss_conf 662499999999975974999938845657999999998719874566634761799982379999997----4968996
Q ss_pred CCCCCCHHHHHHCCE-EEEE
Q ss_conf 489369998871993-5996
Q 002770 758 GDGINDAPSLALADV-GIAL 776 (883)
Q Consensus 758 GDg~ND~~al~~Adv-gIa~ 776 (883)
||..+|..+...|++ +|-+
T Consensus 163 GD~l~Df~aA~eagi~~iRi 182 (209)
T d2b82a1 163 GDSDNDITAARDVGARGIRI 182 (209)
T ss_dssp ESSHHHHHHHHHTTCEEEEC
T ss_pred CCCHHHHHHHHHCCCCCEEE
T ss_conf 59888876798759983575
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.18 E-value=0.13 Score=25.68 Aligned_cols=114 Identities=15% Similarity=0.155 Sum_probs=79.2
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCC--CEEEEE-C----CCC--CHHHHHHHHHHCCCEEEEE
Q ss_conf 798649999999977997999993996999999999909998--649980-3----900--1599999984469938999
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEVGIGK--EYINSS-L----TPQ--QKSEVISTLQTSGHHVAMV 757 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~gi~~--~~v~~~-~----~p~--~K~~~i~~l~~~g~~v~~v 757 (883)
++.+++.+++++|+ ++.+.++|..+...+....+..|+.. +.+++. - .|+ -=...++.+.-+.+.++||
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~lg~~p~e~l~V 170 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFV 170 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHHCCCGGGEEEE
T ss_pred CCCHHHHHHHHHHH--HHCEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHEEEE
T ss_conf 63102367888875--3012677415247788887530222222222322222346863899999999919784338999
Q ss_pred CCCCCCHHHHHHCCE-EEEEECCC-CCH-H------------------------HHHHCCEEEECCCHHHHHHHHH
Q ss_conf 489369998871993-59961497-228-8------------------------9853579994799336999999
Q 002770 758 GDGINDAPSLALADV-GIALQIEA-QEN-A------------------------ASTAASIILLGNKLSQVVDALD 806 (883)
Q Consensus 758 GDg~ND~~al~~Adv-gIa~~~~~-~~~-~------------------------a~~~adivl~~~~l~~i~~~i~ 806 (883)
||..+|+.+-+.|++ +|.+ .. +.+ . .....|+++ +++..++.+++
T Consensus 171 gD~~~di~~A~~aG~~tv~v--~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i--~~l~el~~lv~ 242 (245)
T d1qq5a_ 171 SSNGFDVGGAKNFGFSVARV--ARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVV--PALGDLPRLVR 242 (245)
T ss_dssp ESCHHHHHHHHHHTCEEEEE--CCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEE--SSGGGHHHHHH
T ss_pred ECCHHHHHHHHHCCCEEEEE--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE--CCHHHHHHHHH
T ss_conf 38999999999869929998--47886542212244434540121100003554258999998--99999999998
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.70 E-value=0.18 Score=24.82 Aligned_cols=95 Identities=15% Similarity=0.170 Sum_probs=61.5
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHH----HHHHHHHCCCCC--CEEEEEC-----CC--CCHHHHHHHHHHCCCE
Q ss_conf 798649999999977997999993996999----999999909998--6499803-----90--0159999998446993
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEA----VAATAKEVGIGK--EYINSSL-----TP--QQKSEVISTLQTSGHH 753 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~----a~~ia~~~gi~~--~~v~~~~-----~p--~~K~~~i~~l~~~g~~ 753 (883)
.+.+++.+.++.|++.|++++++|...... ........++.. +.+++.. .| +--...++.+.-....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~e 178 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGG
T ss_pred CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC
T ss_conf 78801999999998634863345434124089999987652573866638995122334304778888776301568651
Q ss_pred EEEECCCCCCHHHHHHCCE-EEEEECCCCCH
Q ss_conf 8999489369998871993-59961497228
Q 002770 754 VAMVGDGINDAPSLALADV-GIALQIEAQEN 783 (883)
Q Consensus 754 v~~vGDg~ND~~al~~Adv-gIa~~~~~~~~ 783 (883)
++||||...|+.+-+.+++ +|.+ .++..
T Consensus 179 ~l~VgD~~~Di~~A~~~G~~ti~v--~~~~~ 207 (225)
T d1zd3a1 179 VVFLDDIGANLKPARDLGMVTILV--QDTDT 207 (225)
T ss_dssp EEEEESCHHHHHHHHHTTCEEEEC--SSHHH
T ss_pred EEEEECCHHHHHHHHHCCCEEEEE--CCCCH
T ss_conf 058816888799999869989998--98634
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=86.61 E-value=0.1 Score=26.65 Aligned_cols=95 Identities=16% Similarity=0.233 Sum_probs=62.2
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHC-CCCC--CEEEEE-----CCCCCH--HHHHHHHHHCCCEEEE
Q ss_conf 79864999999997799799999399699999999990-9998--649980-----390015--9999998446993899
Q 002770 687 SLRHDAEHTVRSLQQKGIKTLLLSGDREEAVAATAKEV-GIGK--EYINSS-----LTPQQK--SEVISTLQTSGHHVAM 756 (883)
Q Consensus 687 ~lr~~~~~~i~~L~~~gi~~~ilTGd~~~~a~~ia~~~-gi~~--~~v~~~-----~~p~~K--~~~i~~l~~~g~~v~~ 756 (883)
++.+++.+.++.++..|+++.++|+-+...+.....+. |+.. +.+++. ..|..+ ....+.+.-..+.++|
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~ 163 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVF 163 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHCCCCHHHCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEE
T ss_conf 65720678999998669828998074189999999874140221460011134554434648999999851999881899
Q ss_pred ECCCCCCHHHHHHCCE-EEEEECCCCCH
Q ss_conf 9489369998871993-59961497228
Q 002770 757 VGDGINDAPSLALADV-GIALQIEAQEN 783 (883)
Q Consensus 757 vGDg~ND~~al~~Adv-gIa~~~~~~~~ 783 (883)
|||..+|+.+-+.|++ +|.+ ....+
T Consensus 164 vgDs~~di~~A~~aG~~ti~v--~~~~~ 189 (197)
T d2b0ca1 164 FDDNADNIEGANQLGITSILV--KDKTT 189 (197)
T ss_dssp EESCHHHHHHHHTTTCEEEEC--CSTTH
T ss_pred EECCHHHHHHHHHCCCEEEEE--CCCCC
T ss_conf 967989999999869989999--99887
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