Citrus Sinensis ID: 002796
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 880 | ||||||
| 224099859 | 818 | predicted protein [Populus trichocarpa] | 0.840 | 0.904 | 0.367 | 9e-95 | |
| 224111096 | 852 | predicted protein [Populus trichocarpa] | 0.832 | 0.860 | 0.369 | 2e-88 | |
| 297737130 | 1001 | unnamed protein product [Vitis vinifera] | 0.842 | 0.740 | 0.320 | 3e-66 |
| >gi|224099859|ref|XP_002311648.1| predicted protein [Populus trichocarpa] gi|222851468|gb|EEE89015.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 287/782 (36%), Positives = 412/782 (52%), Gaps = 42/782 (5%)
Query: 137 NNIVPVSEDKDYQEKEIDSFPSGVPKEAEDPHIVNQISDEREQETEVVPPAESPKFEVKT 196
N++VP E KDY EK + K + D H NQ SDE E+ E P ESPK E K
Sbjct: 41 NHVVPAGESKDYHEK-VKGLDCDDRKGSGDTHDHNQTSDE-EEHAEAHPTPESPKAETKP 98
Query: 197 NTEEGSEVCDTQPTSPSKHSEHQEIQQESNLKENQLQISDHHLEKQTSIKKEE-EGTETS 255
+ E G + P S E E ES+L+E L + + LE+QTS KKEE E S
Sbjct: 99 D-EVGGGDNEFHPASFPNELEGDEKSTESHLEETVLGANSNQLERQTSFKKEEQEIMSVS 157
Query: 256 TSETVQLSHDPDLQEFGDSKFDQPELASIHVDPPTQDSNNSLHIHEDFLGSNL--NCTSE 313
T T+ SHDP+ QE D KFDQ E H + DS NSL E+ +GSN+ + ++
Sbjct: 158 TFVTISPSHDPEPQESMDLKFDQQEFIENHSEQSINDSTNSLETSENIVGSNVVEDIITK 217
Query: 314 KNGDAIGTNISKDMNETVVSGSNLEVDIGKDDFTLKERTAEE--VSCEDRLEIDDRDETG 371
+NG + T S +++ +VSG+ L ++ D + KE ++E + E++++++ +E G
Sbjct: 218 ENGHLVETCASDNLDGILVSGTTLNMEKKIGDLSEKEMASQEDKMLSEEKVDVEVGNEVG 277
Query: 372 N-----AKGEKSVIKSDFLNGVGTKCNGEIPTKKNPISTISPKEESEVTCMDESQNPQTG 426
N E + I+SD + KC E + + + + +V + S N
Sbjct: 278 NDLSKTVVMEPTAIRSDSRSEHREKCEEEFTREMDCYGNNCSESQPQVNLIANSPNSHME 337
Query: 427 VSEPTDDCIVLAAETALAEKESEPVENKPSDCLTHSCDESVKESKIDSEKLSPSESLMIA 486
+S P D C++L ET KESE NK D+S +ES I+ E S ++S +
Sbjct: 338 LSVPEDKCMLLTEETEFTRKESETEVNKHDYSPNQLMDDSNRESDIELEHASQTDSFLGP 397
Query: 487 TEGENNQEGVEDFICCGGNKDC-TEEAKVAKNGGLVDEHSNDQNAASVEHSEDSQKEVEM 545
+ N + V+ N C EEAKV++NG +D ++ Q+ AS + ++S+ + +
Sbjct: 398 SFKNNEESSVDASHDPASNGSCQVEEAKVSENG-YIDLFNDIQSEASEDGCKESEGDTMI 456
Query: 546 VPDSGTVSTESAL---------VDCK-SEEASEEGQVFEEAEDKTKTSYGNENSKDAREN 595
VP+ G + ++ DCK EE + E Q+ EE ++KT+ + ++
Sbjct: 457 VPELGIIPEALSMSNGKGNEGETDCKLEEEKTAEKQIVEEIKEKTEAPCAIGKGAEEQQG 516
Query: 596 GEQC---TPPVEQEVSLTKAPLSLFQPQDNQQNNEMQSENIQNGNDSIPELKPEINGEFL 652
GEQ T V+ E +AP SLFQ QD QQ S + Q N ELKPE EFL
Sbjct: 517 GEQLVSKTLAVQAEAYNPQAPASLFQSQDQQQEKVTVSGDAQGSNALTLELKPESCEEFL 576
Query: 653 VTDGSPFDSK-KSMAETLTPVAESAIEKPDQDISQHTAETMMAPAEANTQVNNVSEQ--- 708
V S ++ ++ T E A+ KP ++ S + E + + E+
Sbjct: 577 VAKVSTDQAEVMNILGTSASAVELAMVKPQEEASYYFIAAREVVRETKSLAFDQCEKCDS 636
Query: 709 ------NADAQESLGRLSTESNSNNSNTQAQIQKSPSFDLDLRIEARTEESDRTPLLYHD 762
+AQES+GRLSTESN +N N Q++KSPSFDLDLRIEAR+EESD+TPLLY D
Sbjct: 637 TIFPKGGYEAQESVGRLSTESNPDNLNIHVQMRKSPSFDLDLRIEARSEESDQTPLLYQD 696
Query: 763 KTATEDFSGEQDVSLGSPIARAQ-DKLQCHAMPVEEKVVRMERNDSDKLKTPFLGFLKEE 821
K E S + DVSL SP +Q + A+PVEEKV+ +ER+DS+K +TPFLGFLKE+
Sbjct: 697 KITVESLSDQSDVSLQSPHLLSQCSQETLRALPVEEKVIALERSDSEKSRTPFLGFLKED 756
Query: 822 GEAPIIVTPQVHGNNAAAKREDKESSNLHAKEVTATS---KEKRKPRSSLFTTCMCCTTV 878
EA +VTP+ N+AAAK+ K+ N KEV + S KEK K R+SLF CMCC TV
Sbjct: 757 EEAHAVVTPKKQDNHAAAKKTTKDLWNSPTKEVASASPKGKEKHKRRTSLFGQCMCCATV 816
Query: 879 LN 880
+N
Sbjct: 817 IN 818
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224111096|ref|XP_002315746.1| predicted protein [Populus trichocarpa] gi|222864786|gb|EEF01917.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297737130|emb|CBI26331.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 880 | ||||||
| FB|FBgn0036203 | 1514 | Muc68D "Mucin 68D" [Drosophila | 0.930 | 0.540 | 0.197 | 1.1e-19 | |
| TAIR|locus:504955937 | 734 | AT2G22795 "AT2G22795" [Arabido | 0.668 | 0.801 | 0.226 | 1.2e-14 | |
| ZFIN|ZDB-GENE-091204-67 | 3919 | si:dkey-33i22.3 "si:dkey-33i22 | 0.818 | 0.183 | 0.209 | 8e-14 | |
| TAIR|locus:2074444 | 673 | AT3G05900 "AT3G05900" [Arabido | 0.645 | 0.843 | 0.227 | 1.3e-13 | |
| ZFIN|ZDB-GENE-081015-2 | 1413 | rpgrb "retinitis pigmentosa GT | 0.753 | 0.469 | 0.208 | 1.8e-13 | |
| TAIR|locus:2098443 | 2081 | AT3G28770 "AT3G28770" [Arabido | 0.929 | 0.393 | 0.210 | 2.2e-13 | |
| UNIPROTKB|Q9NZW4 | 1301 | DSPP "Dentin sialophosphoprote | 0.877 | 0.593 | 0.158 | 2.5e-12 | |
| CGD|CAL0005150 | 1918 | orf19.2850 [Candida albicans ( | 0.863 | 0.396 | 0.208 | 1.1e-11 | |
| UNIPROTKB|Q5A1Z3 | 1918 | CaO19.2850 "Putative uncharact | 0.863 | 0.396 | 0.208 | 1.1e-11 | |
| DICTYBASE|DDB_G0288285 | 1620 | mybX "myb domain-containing pr | 0.5 | 0.271 | 0.189 | 4.3e-07 |
| FB|FBgn0036203 Muc68D "Mucin 68D" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
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Score = 274 (101.5 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 175/885 (19%), Positives = 326/885 (36%)
Query: 17 EISTTQVQESSVKEAGQADGKEVENHNASLAEVKDHSEKENGAATNVPNGEADPHVANQT 76
E+ST ESS E+ ++ ++S E +E A + E+ P Q
Sbjct: 317 ELSTEATNESSSSES--LPNSSTQDSSSS-TETSFQTESTTDATDESSSTESQPDSTTQE 373
Query: 77 SHEREEKEIEDQPPAESPKVEVKSNATEESHESSEMQPNSVSNDSKEHEKLLGNTDGEGG 136
S E + + S V +S++TE S +S+ + +S + E +T+
Sbjct: 374 SSSSTEGPLSTE---SSTAVTDQSSSTESSQDSTTQESSSSTEGPLSTES---STEATNE 427
Query: 137 NNIVPVSEDKDYQEKEIDSFPSGVPKEAEDPHIVNQISDEREQETEVVPPAESPKFEVKT 196
++ S+D QE S G P E S E + S E
Sbjct: 428 SSSTESSQDSTTQESS--SSTEG-PLSTESSTEATNESSSTESSQDSTTQESSSSTEGPL 484
Query: 197 NTEEGSEVCDTQPTSPSKHSEHQEIQQESNLKENQL--QISDHHLEKQXXXXXXXXXXXX 254
+TE +E T +S ++ S+ Q+ S+ E L + S +
Sbjct: 485 STESSTEA--TNESSSTESSQDSTTQESSSSSEGPLSTESSTEATNESSSTESSQDSTTQ 542
Query: 255 XXXXXVQ--LSHDPDLQ--EFGDSKFDQP----ELASIHVDPPTQDSNNSLHIHEDFLGS 306
+ LS +P + E ++ Q E +S DP + +S+ S
Sbjct: 543 ESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEDPLSTESSTEATNESSSTES 602
Query: 307 NLNCTSEKNGDAIGTNISKDMNETVVSGSNLEVDIGKDDFTLKERTAEE--VSCEDRLEI 364
+ + T++++ + +S + + T S + + +D T K ++ E +S E E
Sbjct: 603 SQDSTTQESSSSTEGPLSTE-SSTEGSNESSSTESSQDSTTQKSSSSTESPLSTEPSTEA 661
Query: 365 DDRDETGNAKGEKSVIKSDFLNGV-----GTKCNGEIPTKKNPISTISPKEESEVTCMDE 419
++ T +++ + S G T+ N T+ + ST S +
Sbjct: 662 NESSSTESSQDSTTQESSSSTEGPLSTEPSTEANESSSTESSQDSTTQESSSSSEGPLST 721
Query: 420 SQNPQTGVSEPTDDCIVLAAETALAEKESEPVENKPSDCLTHSCDESVKESKIDSEKLSP 479
+ + S T+ + + + ES P+ +PS T + + S ES DS
Sbjct: 722 ESSTEANESSSTESSQDSTTQESSSSTES-PLSTEPS---TEANESSSTESSQDSTTQES 777
Query: 480 SESLMIATEGENNQEGVEDFICCGGNKDCTEEAKVAKNGGLVDEHSNDQN-AASVEHSED 538
S S E + E E T+E+ + G L E S + N ++S E S+D
Sbjct: 778 SSSTEGPLSTEPSTEANESSSTESSQDSTTQESSSSSEGPLSTESSTEANESSSTESSQD 837
Query: 539 SQKEVEMVPDSGTVSTES---ALVDCKSEEASEEGQVFEEAED-----KTKTSYGNENSK 590
S + +STES A + S E+S++ E + T++S N
Sbjct: 838 STTQESSSSTEDPLSTESSTEATYESSSTESSQDSTTQESSSSTEGPLSTESSTEGSNES 897
Query: 591 DARENGEQCTPPVEQEVSLTKAPLSLFQPQDNQQNNEMQSENIQNGNDSIPELKPEINGE 650
+ E+ + T ++ S T++PLS +P + + NE S + ++ DS + E +
Sbjct: 898 SSTESSQDST--TQESSSSTESPLST-EP--STEANE--SSSTESSQDSTTQ---ESSSS 947
Query: 651 FLVTDGSPFDSKKSMAETLTPVAESAIEKPDQDISQHTAETMMAPAEANTQVNNVSEQNA 710
T+G P ++ S + ES+ + Q+ S T + E++T+ +N S
Sbjct: 948 ---TEG-PLSTESSTEANESSSTESSQDSTTQESSSSTEGPLST--ESSTEGSNESSSTE 1001
Query: 711 DAQESLGRLXXXXXXXXXXXQAQIQKSPSFDLDLRIEARTEESDRT---PLLYHDKTATE 767
+Q+S + + + + S + ++ T+ES + PL T
Sbjct: 1002 SSQDSTTQESSSSTESPLSTEPSTEANESSSTESSQDSTTQESSSSTEGPLSTESSTEAS 1061
Query: 768 DFSGEQDVSLGSPIARAQDKLQCHAMPVEEKVVRMERNDSDKL-KTPFLGF-LKEEGEAP 825
+ S + S S + + V E + ++ L + G + +
Sbjct: 1062 NESSSTESSQDSTTQESSSSTEGPLSTESSTEVTQEPSPTESLPNSSTQGTPCTTDNPSS 1121
Query: 826 IIVTPQVHGNNAAAKREDKESSNLHAKEVTATSKEKRKPRSSLFT 870
+ +P GN+ + E+ N T+ P SS T
Sbjct: 1122 LEPSPSTPGNDDDSGNSGSENGNSSTSGSPCTTDNPSDPESSSST 1166
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| TAIR|locus:504955937 AT2G22795 "AT2G22795" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-091204-67 si:dkey-33i22.3 "si:dkey-33i22.3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| TAIR|locus:2074444 AT3G05900 "AT3G05900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-081015-2 rpgrb "retinitis pigmentosa GTPase regulator b" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098443 AT3G28770 "AT3G28770" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q9NZW4 DSPP "Dentin sialophosphoprotein" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| CGD|CAL0005150 orf19.2850 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5A1Z3 CaO19.2850 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0288285 mybX "myb domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 880 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.6 bits (151), Expect = 6e-10
Identities = 85/676 (12%), Positives = 186/676 (27%), Gaps = 189/676 (27%)
Query: 120 DSKEHEKLLGNTDGEGGNNIVPVSED---KDYQEKEIDSFPSGVPKEAEDPHIVNQISDE 176
D + E D I+ V ED ++ K++ P + + E HI+
Sbjct: 8 DFETGEHQYQYKD------ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 177 ----------REQETEVVPPAESPKF---EVKTNTEEGSEVCDTQPTSPSKHSEHQEIQQ 223
++ E+V KF ++ N + T+ PS + Q+
Sbjct: 62 SGTLRLFWTLLSKQEEMV-----QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR 116
Query: 224 ESNLKENQLQISDHHLEKQTSIKKEEEGTETSTSETVQLSHDPDLQEFGDSKFDQPELAS 283
+ +NQ+ + +++ + K + +L ++ G + +A
Sbjct: 117 DRLYNDNQV-FAKYNVSRLQPYLKLRQALL-------ELRPAKNVLIDGVLGSGKTWVAL 168
Query: 284 IHVDPPTQDSNNSLHIHEDFLGSNLNCTSE----KNGDAIGTNISKDMNETVVSGSNLEV 339
I L NC S + + I + SN+++
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLK---NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL 225
Query: 340 DIGKDDFTLKERTAEEVSCEDRLEIDD-RDETGNAKGEKSVIKS-DFLNGVGTKCNGEIP 397
I L+ + L + + ++ + + C +
Sbjct: 226 RIHSIQAELRRLLKSKPYENCLLVLLNVQN--------AKAWNAFNL------SCKILLT 271
Query: 398 TK-KNPISTISPKEESEVTCMDESQNPQTGVSEPTDDCIVLAAETALAEKESEPVENKPS 456
T+ K +S + ++ S L E + + K
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSM--------------------TLTPDEVKSLLLK-- 309
Query: 457 DCLTHSCDESVKESKIDSEKLSPSESLMIATEGENNQEGVE--DFICCGGNKDCTEEAKV 514
L + +E +P ++ E+ ++G+ D
Sbjct: 310 -YLDCRPQDLPREVL----TTNP---RRLSIIAESIRDGLATWDNW-------------- 347
Query: 515 AKNGGLVDEHSN-DQNAASVEHSEDSQKEVEM---------VPDSGTVSTE--SALVDCK 562
+H N D+ +E S + + E P S + T S +
Sbjct: 348 --------KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDV 399
Query: 563 SEEASEEGQVFEEAEDKTKTSYGNENSKDARE--NGEQC--TPPVEQEVSLTKAPLSLFQ 618
+ + V + S + K++ +E E +L ++ + +
Sbjct: 400 IKS--DVMVVVNKLHKY---SLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454
Query: 619 PQDNQQNNEMQSENIQN-------------GNDSIPELKPEI--NGEFL----VTDGSPF 659
++++ + + L + + FL D + +
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514
Query: 660 DSKKSMAETLT-------------P---------------VAESAIEKPDQDISQHTAET 691
++ S+ TL P + E+ I D+ +
Sbjct: 515 NASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLR---IA 571
Query: 692 MMAP-----AEANTQV 702
+MA EA+ QV
Sbjct: 572 LMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00