Citrus Sinensis ID: 002801
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 879 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LJR3 | 845 | Protein SPA1-RELATED 3 OS | yes | no | 0.885 | 0.920 | 0.662 | 0.0 | |
| Q94BM7 | 794 | Protein SPA1-RELATED 4 OS | no | no | 0.862 | 0.954 | 0.623 | 0.0 | |
| Q9SYX2 | 1029 | Protein SUPPRESSOR OF PHY | no | no | 0.838 | 0.716 | 0.412 | 1e-162 | |
| Q9T014 | 1036 | Protein SPA1-RELATED 2 OS | no | no | 0.453 | 0.385 | 0.512 | 1e-117 | |
| P93471 | 672 | E3 ubiquitin-protein liga | N/A | no | 0.569 | 0.745 | 0.390 | 1e-100 | |
| P43254 | 675 | E3 ubiquitin-protein liga | no | no | 0.579 | 0.754 | 0.380 | 7e-97 | |
| Q8NHY2 | 731 | E3 ubiquitin-protein liga | yes | no | 0.550 | 0.662 | 0.367 | 2e-87 | |
| Q9R1A8 | 733 | E3 ubiquitin-protein liga | yes | no | 0.550 | 0.660 | 0.366 | 5e-87 | |
| Q9LTJ6 | 385 | WD repeat-containing prot | no | no | 0.341 | 0.779 | 0.371 | 1e-47 | |
| Q9FFA7 | 368 | WD repeat-containing prot | no | no | 0.337 | 0.807 | 0.359 | 1e-43 |
| >sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/839 (66%), Positives = 671/839 (79%), Gaps = 61/839 (7%)
Query: 49 ENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108
++ IDPFV ++EWGDVSLRQWLDKP+RSVDV+ECLH+FRQIVEIV AAHSQGIVVHNV
Sbjct: 59 DDSLGIDPFVRSLEWGDVSLRQWLDKPERSVDVFECLHVFRQIVEIVNAAHSQGIVVHNV 118
Query: 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 168
RPSCFVMSSFNHVSFIESASCSDSGSDS E+G +Q K++ S RR
Sbjct: 119 RPSCFVMSSFNHVSFIESASCSDSGSDSLEDGPISQ----KEIGSS------------RR 162
Query: 169 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK 228
E+ +S+A ++ Y +K+L+ ++ + EEK QPFPMK
Sbjct: 163 EEA---------VSKAIAIEEKGVY------------NKLLERKIEKLE-EEKTQPFPMK 200
Query: 229 QILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP 288
IL MET+WY SPEE G+ +CASD+YRLGVLLFELFCP + EEK+RTMSSLRHRVLP
Sbjct: 201 HILAMETSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEKSRTMSSLRHRVLP 260
Query: 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEE 348
PQ+LLK PKEASFCLWLLHPEP+ RP M +LLQSEF+ EPRD++EEREAAIELR++I+E+
Sbjct: 261 PQILLKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRDNLEEREAAIELRDRIEEQ 320
Query: 349 ELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDD-- 406
E LLEFLLL+QQRKQESA +LQD VS + SDIE+V K+Q IL+K+G S ++ + DD
Sbjct: 321 ESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRGS--SLSDFSKDDHQ 378
Query: 407 -LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDNQKHNLTGNEERSL 464
SG + S + + SA + SRKR R L L + E D+ ++ +L
Sbjct: 379 YTSGQPLMSFQA-NEEPSAFLASRKRVRQGILALENGVEVDEE-----------SQGSTL 426
Query: 465 FKSSRLMKNFKKLESAYFLTRCRPVKP--SGRPLVRHSQLSSDGRTSKPLVNERSSINNL 522
+SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+ +V+E+SS++N
Sbjct: 427 LESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSSVSNP 486
Query: 523 GSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG 580
+ + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNSSNLVC+L+FDR+G
Sbjct: 487 VAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDREG 546
Query: 581 ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640
ELFA AGVNKKIK+FEC++I+N+NRDIHYPVVE+A RSKLSS+CWNSYIKSQIASSNF+G
Sbjct: 547 ELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDG 606
Query: 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 700
VVQ+WDV+RSQ++TEM+EH++RVWSID SSADPTLLASGSDDG+VKLWSINQGVSIGTIK
Sbjct: 607 VVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTVKLWSINQGVSIGTIK 666
Query: 701 TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTL 760
TKANVCCVQFP DSGRSLAFGSADH++YYYDLRN KIPLCT+IGH+KTVSYVKFVD++TL
Sbjct: 667 TKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTL 726
Query: 761 VSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVY 820
VS+STDNTLKLWDLSM S + ++PLHSFTGHTN+KNFVGLSV DGY+ATGSETNEVFVY
Sbjct: 727 VSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGSETNEVFVY 786
Query: 821 HKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
HKAFPMP +S+ FN+ D +SG E DDA+QFISS+CWRGQSS TLVAANS+GNIKILEM+
Sbjct: 787 HKAFPMPVMSYMFNNTDSMSGLEVDDASQFISSICWRGQSS-TLVAANSNGNIKILEMM 844
|
Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1025 bits (2650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/867 (62%), Positives = 644/867 (74%), Gaps = 109/867 (12%)
Query: 27 SDGVE-LTHGDHLR---------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK 76
+DG + L+H D++R N GGL D V A+E DVSLRQWLD P
Sbjct: 23 TDGSKSLSHIDYVRSLLGSHKEANLGGLDD--------DSIVRALECEDVSLRQWLDNPD 74
Query: 77 RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS 136
RSVD +EC H+FRQIVEIV AAHSQGIVVHNVRPSCFVMSSFN+VSFIESASCSDSGS
Sbjct: 75 RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNNVSFIESASCSDSGS-- 132
Query: 137 HEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 196
+E T++ E
Sbjct: 133 -DEDATTKSRE------------------------------------------------- 142
Query: 197 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 256
+ ++ +IL R + +Q E KKQPFPMKQIL ME +WY S EE G+ +CASDIY
Sbjct: 143 ---IGSSRQEEILSERRSKQQEEVKKQPFPMKQILAMEMSWYTSHEEDNGSLCNCASDIY 199
Query: 257 RLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316
RLGVLLFELFCP S+ EEK+RTMSSLRHRVLPPQ+LL +PKEASFCLWLLHPEPS RP M
Sbjct: 200 RLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSM 259
Query: 317 GELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFI 376
ELLQSEF+NEPR+++EEREAA+ELR++I+E+ELLLEFL L+QQRKQE+A KLQD +S +
Sbjct: 260 SELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLL 319
Query: 377 CSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPEL 436
SDI++V K+Q +L++KG D + + SRKR R
Sbjct: 320 SSDIDQVVKRQLVLQQKG-------------------------RDVRSFLASRKRIRQGA 354
Query: 437 QLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG--- 493
+ EE +D+ +++ L E +L +SSRLM+N KKLES YF TR R +K +
Sbjct: 355 ETTAAEEENDDNSIDEESKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAE 414
Query: 494 RPLVRH-SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSK 552
+PL R+ S LS +GR+S E+SS++ SK+ ++ R+ GWI+PFLEGLCKYLSFSK
Sbjct: 415 KPLARYYSALSCNGRSS-----EKSSMSQ-PSKDPINDSRQGGWIDPFLEGLCKYLSFSK 468
Query: 553 LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612
LRVKADL QGDLLNSSNLVC++ FDRDGE FA AGVNKKIK+FEC++II + RDIHYPVV
Sbjct: 469 LRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVV 528
Query: 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672
E+ASRSKLS ICWNSYIKSQ+ASSNFEGVVQVWDV+R+Q++TEM+EHE+RVWSID+SSAD
Sbjct: 529 ELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSAD 588
Query: 673 PTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDL 732
PTLLASGSDDGSVKLWSINQGVSIGTIKTKAN+CCVQFP ++GRSLAFGSADH++YYYDL
Sbjct: 589 PTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSETGRSLAFGSADHKVYYYDL 648
Query: 733 RNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 792
RN K+PLCT+IGH+KTVSYV+FVD++TLVS+STDNTLKLWDLSM S + +TPLHSF GH
Sbjct: 649 RNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGH 708
Query: 793 TNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFIS 852
TNVKNFVGLSV DGY+ATGSETNEVFVYHKAFPMP LS+ F DP+S E DDA+QFIS
Sbjct: 709 TNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSELEVDDASQFIS 768
Query: 853 SVCWRGQSSNTLVAANSSGNIKILEMV 879
SVCWRGQSS TLVAANS+GNIKILEMV
Sbjct: 769 SVCWRGQSS-TLVAANSTGNIKILEMV 794
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Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 572 bits (1473), Expect = e-162, Method: Compositional matrix adjust.
Identities = 343/832 (41%), Positives = 487/832 (58%), Gaps = 95/832 (11%)
Query: 66 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 125
+SLR++L + L +FRQ+VE+V +AHS+ + + ++RPS F + + +I
Sbjct: 275 ISLREFLRSSYAKREKRHGLCLFRQLVELVDSAHSKRLFLLDLRPSLFTLVPSKKLRYIG 334
Query: 126 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185
+ +D SD E+ LN + ++ SS R ++ R+ DL L +P N L S
Sbjct: 335 NFGKNDLESDVDED-LNRRRPVVEESSSG------GRDSKKRKMDLHL-NSPGNQLQATS 386
Query: 186 C----MQSSSAYGTHVVLVEG-----MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236
+ S ++V +Q+ + N ++V V K+ +E
Sbjct: 387 TGRPFKRKSPVIDLNMVDARNPDSCELQQQDYIKN-LSVSSVSRKQS-----MSTWLEEQ 440
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFP 296
WY PEE+ G + S+IY LGVLLFEL C +GE M+ LRHR+LPP L K+P
Sbjct: 441 WYTCPEEINGEDIGEKSNIYALGVLLFELLCHCESGEMHAAMMADLRHRILPPTFLSKYP 500
Query: 297 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLL 356
KEA FCLWLLHPEPS RP ++L+SE + E DS++ AA E+ ELLL FL
Sbjct: 501 KEAGFCLWLLHPEPSSRPSARDILKSELICED-DSVKSTAAAEEI------SELLLHFLS 553
Query: 357 LVQ-QRKQESAKKLQDIVSFICSDIEEVSKQQA----ILRKKGGLGSFAELANDDLSGLN 411
++ Q+K++++K LQDI + + DI+E ++ + ++R G + + +
Sbjct: 554 SLEVQKKKKASKLLQDIQT-LEDDIKEAERRYSSNVSLVRSHGAIEKRVQSSP------- 605
Query: 412 IPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLM 471
+D C+ S F P T N +R LM
Sbjct: 606 ------LDEHCTT---SSALFVP----------------------TANTDR-------LM 627
Query: 472 KNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN-ERSSINNLGSKEGYSE 530
N ++LE AYF R + + S ++ R+ K L + +R S N +++ ++
Sbjct: 628 SNIRQLEDAYFFMRSQ---------INLSSSAATARSDKTLKDRDRCSENQNENQDMSTK 678
Query: 531 GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK 590
G+ S + F EGLCK+ +SK + GDLLNS+++VCSLSFD D E AAAG++K
Sbjct: 679 GKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISK 738
Query: 591 KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS 650
KIK+F+ +A +NE+ +HYP+VEM ++SKLS +CWNSYIK+ +AS++++GVVQ+WD
Sbjct: 739 KIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIWDAGTG 798
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQF 710
Q ++ EH++R WS+DFS +DPT SGSDD SVKLWSIN+ S+GTI + ANVCCVQF
Sbjct: 799 QGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPANVCCVQF 858
Query: 711 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLK 770
S LAFGSAD+++Y YDLR K P CTL GH K VSYVKF+D+ T+VSASTDN+LK
Sbjct: 859 SSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSASTDNSLK 918
Query: 771 LWDLSMCTSRVIDTPLHSFT--GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828
LW+L+ S + S T GHTN KNFVGLSV DGY+A GSETNEV+ Y+K+ PMP
Sbjct: 919 LWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETNEVYSYYKSLPMPM 978
Query: 829 LSFNFNHADPLSGPET-DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
S+ F DP+SG E DD QF+SSVCWR + SN LVAANS+GN+K+L++V
Sbjct: 979 TSYKFGSVDPISGNEYFDDNGQFVSSVCWR-KKSNMLVAANSTGNMKLLKLV 1029
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Controls normal photoperiodic flowering and regulates circadian rhythms. Required for suppression of photomorphogenesis in dark-grown seedlings and for normal elongation growth of adult plants. Integral component of the COP1/SPA E3 ubiquitin-protein ligase complex. Involved in HY5, HFR1, LAF1 and CO degradation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: - EC: . EC: - |
| >sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 212/414 (51%), Positives = 282/414 (68%), Gaps = 15/414 (3%)
Query: 469 RLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY 528
RL++N +LESAYF R P R +R + L N +++ + + E +
Sbjct: 635 RLIRNINQLESAYFAARIDAHLPEARYRLRPDR--------DLLRNSDNTVAEVENSETW 686
Query: 529 SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV 588
S R G F +GLCKY +SK + L +L N+SN++CSL FDRD + FA AGV
Sbjct: 687 SSDDRVG---AFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGV 743
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
+KKIK++E +++ NE+ DIHYP +EM +RSKLS +CWN+YI++ +ASS+++G+V++WDV+
Sbjct: 744 SKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVT 803
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCV 708
Q ++ EHE+R WS+DFS A PT LASGSDD SVKLW+IN+ +GTI+ ANVCCV
Sbjct: 804 TGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNIANVCCV 863
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768
QF S LAFGS+D R Y YDLRN + P C L GHNK VSY KF+D TLV+ASTDNT
Sbjct: 864 QFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNT 923
Query: 769 LKLWDLSMCTSRVIDTPLHSFT--GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 826
LKLWDL T + T S T GHTN KNFVGLS DGY+A GSETNEV+ YH++ PM
Sbjct: 924 LKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGSETNEVYAYHRSLPM 983
Query: 827 PALSFNFNHADPLSGPET-DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
P S+ F DP+SG E +D F+SSVCWR + SN +V+A+S+G+IK+L++V
Sbjct: 984 PITSYKFGSIDPISGKEIEEDNNLFVSSVCWR-KRSNMVVSASSNGSIKVLQLV 1036
|
Involved in suppression of photomorphogenesis in dark-grown seedlings. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 220/563 (39%), Positives = 312/563 (55%), Gaps = 62/563 (11%)
Query: 332 MEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQA--- 388
ME+ EA + ++LL+FL ++++K + K++Q + FI DI V K +
Sbjct: 150 MEQEEAERNM-------QILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLY 202
Query: 389 -----------ILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQ 437
+L GG S + + SGL LN+ S + + + ++
Sbjct: 203 RARDRYSVKLRMLDDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGSHTKKNDGKSQIS 262
Query: 438 LH-HLEECDDNL--DDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPV-KPSG 493
H H + D + D+Q N +G +L + R+ F L+ Y R + KP G
Sbjct: 263 SHGHGIQRRDPITGSDSQYINQSG---LALVRKKRVHTQFNDLQECYLQKRRQAADKPHG 319
Query: 494 RPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL 553
+ ER + N S+EGYS G ++ F L + +S+L
Sbjct: 320 Q-------------------QERDT--NFISREGYSCG-----LDDFQSVLTTFTRYSRL 353
Query: 554 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613
RV A++ GD+ +S+N+V S+ FDRD +LFA AGV+++IKVF+ A++NE D H PVVE
Sbjct: 354 RVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVE 413
Query: 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673
M +RSKLS + WN Y K+QIASS++EG+V VW ++ + L E EHE+R WS+DFS DP
Sbjct: 414 MTTRSKLSCLSWNKYAKNQIASSDYEGIVTVWTMTTRKSLMEYEEHEKRAWSVDFSRTDP 473
Query: 674 TLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLR 733
++L SGSDD VK+W NQ S+ I KAN+CCV++ SG +A GSADH I+YYDLR
Sbjct: 474 SMLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKYNPGSGNYIAVGSADHHIHYYDLR 533
Query: 734 NSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHT 793
N P+ GH K VSYVKF+ L SASTD+TL+LWD+ + P+ +F GH
Sbjct: 534 NISRPVHVFTGHKKAVSYVKFLSNDELASASTDSTLRLWDVKQ------NLPVRTFRGHA 587
Query: 794 NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISS 853
N KNFVGL+V Y+A GSETNEVFVYHK P F D + E + + FIS+
Sbjct: 588 NEKNFVGLTVRSEYIACGSETNEVFVYHKEISKPLTWHRFGTLD-MEDAEDEAGSYFISA 646
Query: 854 VCWRGQSSNTLVAANSSGNIKIL 876
VCW+ T++ ANS G IK+L
Sbjct: 647 VCWKSDRP-TILTANSQGTIKVL 668
|
E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Pisum sativum (taxid: 3888) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 355 bits (912), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 213/560 (38%), Positives = 316/560 (56%), Gaps = 51/560 (9%)
Query: 332 MEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQA-IL 390
+ ER+ +E E ++LL+FL ++++K + ++Q + +I DI V + + +
Sbjct: 148 LAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLY 207
Query: 391 RKKGGLGSFAELANDDLS------------GLNIPSLNIIDNDCSATMGSRK-RFRPELQ 437
R + + DD S G N SL+I + ++K + +
Sbjct: 208 RARDRYSVKLRMLGDDPSTRNAWPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGS 267
Query: 438 LHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYF-LTRCRPVKPSGRPL 496
H L +K L+G++ +SL +S+ M K++ + + L C L
Sbjct: 268 SHGLP---------KKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECY--------L 310
Query: 497 VRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK 556
+ QL+ + + N++S + +EGYS G + F L + +S+LRV
Sbjct: 311 QKRRQLADQPNSKQE--NDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRVI 359
Query: 557 ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616
A++ GD+ +S+N+V S+ FDRD ELFA AGV++ IKVF+ +++NE D+ P+VEM++
Sbjct: 360 AEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMST 419
Query: 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL 676
RSKLS + WN + K+ IASS++EG+V VWDV+ Q L E EHE+R WS+DFS +P++L
Sbjct: 420 RSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSML 479
Query: 677 ASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK 736
SGSDD VK+W Q S+ I KAN+CCV++ S +A GSADH I+YYDLRN
Sbjct: 480 VSGSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNIS 539
Query: 737 IPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK 796
PL GH K VSYVKF+ L SASTD+TL+LWD+ + P+ +F GHTN K
Sbjct: 540 QPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVK------DNLPVRTFRGHTNEK 593
Query: 797 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW 856
NFVGL+V Y+A GSETNEV+VYHK P S F D + E + + FIS+VCW
Sbjct: 594 NFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPD-MDDAEEEAGSYFISAVCW 652
Query: 857 RGQSSNTLVAANSSGNIKIL 876
+ S T++ ANS G IK+L
Sbjct: 653 KSDSP-TMLTANSQGTIKVL 671
|
E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors such as HY5, HYH and LAF1. Down-regulates MYB21, probably via ubiquitination process. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 324 bits (830), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 209/568 (36%), Positives = 294/568 (51%), Gaps = 84/568 (14%)
Query: 320 LQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSD 379
L E L + + +E A +L ++L+EFL + ++ K+E +++Q +S + D
Sbjct: 240 LMLELLVQKKKQLEAESHAAQL-------QILMEFLKVARRNKREQLEQIQKELSVLEED 292
Query: 380 IEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLH 439
I+ V + G ++ ++ D +P S+ + S + +P
Sbjct: 293 IKRVEEMS---------GLYSPVSEDS----TVPQFEAPSPSHSSIIDSTEYSQPPG--- 336
Query: 440 HLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRH 499
+N T R RL +F+ LE YF TR
Sbjct: 337 --FSGSSQTKKQPWYNSTLASRRK-----RLTAHFEDLEQCYFSTR-------------M 376
Query: 500 SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559
S++S D RT+ L + F E L K+ ++ +R A L
Sbjct: 377 SRISDDSRTASQL-------------------------DEFQECLSKFTRYNSVRPLATL 411
Query: 560 NQG-DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 618
+ DL N S++V S+ FDRD + FA AGV KKIKV+E D +I + DIHYP EM S
Sbjct: 412 SYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNS 471
Query: 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678
K+S I W+SY K+ +ASS++EG V +WD Q +EHE+R WS+DF+ DP LLAS
Sbjct: 472 KISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLAS 531
Query: 679 GSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIP 738
GSDD VKLWS N S+ +I+ KANVCCV+F S LAFG ADH ++YYDLRN+K P
Sbjct: 532 GSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQP 591
Query: 739 LCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLS--MCTSRVIDTPLHSFTGHTNVK 796
+ GH K VSY KFV +VSASTD+ LKLW++ C L SF GH N K
Sbjct: 592 IMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYC--------LRSFKGHINEK 643
Query: 797 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL--SGPETDDAAQFISSV 854
NFVGL+ Y+A GSE N +++Y+K L+F F+ + + DD +F+S+V
Sbjct: 644 NFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 703
Query: 855 CWRG---QSSNTLVAANSSGNIKILEMV 879
CWR SN L+AANS G IK+LE+V
Sbjct: 704 CWRALPDGESNVLIAANSQGTIKVLELV 731
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Homo sapiens (taxid: 9606) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 323 bits (827), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 208/568 (36%), Positives = 295/568 (51%), Gaps = 84/568 (14%)
Query: 320 LQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSD 379
L E L + + +E A +L ++L+EFL + ++ K+E +++Q +S + D
Sbjct: 242 LMLELLVQKKKQLEAESHAAQL-------QILMEFLKVARRNKREQLEQIQKELSVLEED 294
Query: 380 IEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLH 439
I+ V + G ++ ++ D +P S+ + S + +P
Sbjct: 295 IKRVEEMS---------GLYSPVSEDS----TVPQFEAPSPSHSSIIDSTEYSQPP---- 337
Query: 440 HLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRH 499
+K + S + RL +F+ LE YF TR
Sbjct: 338 ----GFSGTSQTKKQPWYNSTLAS--RRKRLTAHFEDLEQCYFSTR-------------M 378
Query: 500 SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559
S++S D RT+ L + F E L K+ ++ +R A L
Sbjct: 379 SRISDDSRTASQL-------------------------DEFQECLSKFTRYNSVRPLATL 413
Query: 560 NQG-DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 618
+ DL N S++V S+ FDRD + FA AGV KKIKV+E +I + DIHYP EM S
Sbjct: 414 SYASDLYNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNS 473
Query: 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLAS 678
K+S I W+SY K+ +ASS++EG V +WD Q +EHE+R WS+DF+ DP LLAS
Sbjct: 474 KISCISWSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLAS 533
Query: 679 GSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIP 738
GSDD VKLWS N S+ +I+ KANVCCV+F S LAFG ADH ++YYDLRN+K P
Sbjct: 534 GSDDAKVKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQP 593
Query: 739 LCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLS--MCTSRVIDTPLHSFTGHTNVK 796
+ GH K VSY KFV +VSASTD+ LKLW++ C L SF GH N K
Sbjct: 594 IMVFKGHRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYC--------LRSFKGHINEK 645
Query: 797 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL--SGPETDDAAQFISSV 854
NFVGL+ Y+A GSE N +++Y+K L+F F+ + + DD +F+S+V
Sbjct: 646 NFVGLASNGDYIACGSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAV 705
Query: 855 CWRGQS---SNTLVAANSSGNIKILEMV 879
CWR S SN L+AANS G IK+LE+V
Sbjct: 706 CWRALSDGESNVLIAANSQGTIKVLELV 733
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Mus musculus (taxid: 10090) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9LTJ6|RUP1_ARATH WD repeat-containing protein RUP1 OS=Arabidopsis thaliana GN=RUP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/323 (37%), Positives = 183/323 (56%), Gaps = 23/323 (7%)
Query: 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSI 623
S+ + ++ FD GE+ A G+ +KI+ + +++ E+RD H E + + +KLSS+
Sbjct: 69 TGSDAIGAIEFDPTGEIIATGGIARKIRSYRLSSLL-ESRDDHVTASESYICTPAKLSSL 127
Query: 624 CWNSYIKSQ-IASSNFEGVVQVWDVSRSQVLTEMREHE-RRVWSIDFSSADPTLL-ASGS 680
W + I S +++GVV +DV + ++E EH RR+WS+D++ + +L+ ASGS
Sbjct: 128 KWRPDFSGRVIGSGDYDGVVTEYDVEKQVPVSERDEHGGRRIWSVDYTLYNGSLIGASGS 187
Query: 681 DDGSVKLWSINQGVSIG-TIK--TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI 737
DDG+V++W G ++ T++ A +C V+F G S+A G AD Y YD+R
Sbjct: 188 DDGTVQMWDPRNGGTLEETVRPGGGAAICSVEFDPFGGSSIAVGCADRNAYVYDIRRLVD 247
Query: 738 PLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN 797
PL L GH KTV+Y +F+D+ T+V+ STD +LK WD+ RV+ T + GH N +N
Sbjct: 248 PLIVLDGHTKTVTYARFMDSHTIVTGSTDGSLKQWDIDN-GRRVVRT----YRGHVNSRN 302
Query: 798 FVGLSVW--DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVC 855
FVGLSVW G V +GSE N+VFVY K + P H + +F+SSVC
Sbjct: 303 FVGLSVWRHGGLVVSGSENNQVFVYDKRWEEPVWVCGLGHTNRFGSDR-----RFVSSVC 357
Query: 856 WRGQSSN--TLVAANSSGNIKIL 876
R + TLVA S G ++I
Sbjct: 358 LRQVDEDWCTLVAGGSDGALEIF 380
|
Functions in association with RUP2 as repressor of UV-B-induced photomorphogenesis mediated by UVR8 and HY5. Play a crucial negative feedback regulatory role downstream of UVR8-COP1 to inhibit UVR8 function, balance UV-B-specific responses and ensure normal plant growth. Is involved in the regulation of photoperiodic flowering and vegetative development. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9FFA7|RUP2_ARATH WD repeat-containing protein RUP2 OS=Arabidopsis thaliana GN=RUP2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 178/331 (53%), Gaps = 34/331 (10%)
Query: 569 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN--RDIHYPVVEMASR--------S 618
+++ ++ FD + A AG+++KI+ + +++ N V+ A+ +
Sbjct: 41 DVIGAIEFDPTDNIVATAGISRKIRFYGLPSLLRNNAVSGTGVSFVDQATACEYYICTPA 100
Query: 619 KLSSICWNSYIKSQ-IASSNFEGVVQVWDVSRSQVLTEMREHE-RRVWSIDFS--SADPT 674
KLSS+ W + I S +++GVV +D+ + + E EH RRVWS+D++ T
Sbjct: 101 KLSSLRWRPGSGGRVIGSGDYDGVVMEYDLEKRTPVFERDEHGGRRVWSVDYTRHGGAST 160
Query: 675 LLASGSDDGSVKLWS--INQGVSIGTIK----TKANVCCVQFPLDSGRSLAFGSADHRIY 728
+ ASGSDDG++++W S+G ++ ++ VCCV+F G ++A G AD + Y
Sbjct: 161 VGASGSDDGTMQVWDPRCPPEESVGVVRPAGICRSAVCCVEFDPSGGPAVAVGCADRKGY 220
Query: 729 YYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHS 788
YD+R P TL GH KTVSYV+F+D T+V+A TD LKLW S+ RVI T
Sbjct: 221 VYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKLW--SVEDGRVIRT---- 274
Query: 789 FTGHTNVKNFVGLSVW--DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDD 846
+ GH N +NFVGLSVW GSE N VFVY + + P F SG +
Sbjct: 275 YEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEPVGMNSGSDK-- 332
Query: 847 AAQFISSVCWR--GQSSNTLVAANSSGNIKI 875
+F+SSVCWR G TLVA S G +++
Sbjct: 333 --RFVSSVCWRQSGVDQCTLVAGGSDGVLQV 361
|
Functions in association with RUP1 as repressor of UV-B-induced photomorphogenesis mediated by UVR8 and HY5. Play a crucial negative feedback regulatory role downstream of UVR8-COP1 to inhibit UVR8 function, balance UV-B-specific responses and ensure normal plant growth. Is involved in the regulation of photoperiodic flowering and vegetative development. May act as negative regulator of photoperiodic flowering by suppressing flowering through the action of CONSTANS (CO) and FLOWERING LOCUS T (FT). Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 879 | ||||||
| 255585740 | 889 | ubiquitin ligase protein cop1, putative | 0.978 | 0.967 | 0.750 | 0.0 | |
| 359493656 | 903 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.987 | 0.961 | 0.721 | 0.0 | |
| 356542282 | 892 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.982 | 0.968 | 0.709 | 0.0 | |
| 356546870 | 892 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.981 | 0.967 | 0.710 | 0.0 | |
| 357452949 | 875 | SPA1-like protein [Medicago truncatula] | 0.959 | 0.963 | 0.696 | 0.0 | |
| 224128308 | 857 | predicted protein [Populus trichocarpa] | 0.930 | 0.954 | 0.730 | 0.0 | |
| 224114936 | 851 | predicted protein [Populus trichocarpa] | 0.921 | 0.951 | 0.717 | 0.0 | |
| 449446929 | 850 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.944 | 0.976 | 0.714 | 0.0 | |
| 75335085 | 845 | RecName: Full=Protein SPA1-RELATED 3 gi| | 0.885 | 0.920 | 0.662 | 0.0 | |
| 356545455 | 788 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.894 | 0.997 | 0.665 | 0.0 |
| >gi|255585740|ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis] gi|223526576|gb|EEF28831.1| ubiquitin ligase protein cop1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1318 bits (3412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/866 (75%), Positives = 744/866 (85%), Gaps = 6/866 (0%)
Query: 15 GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK 74
G S D RK +D V L H + L+NQ GLSG ++E A+DPF AIEWGDVSLRQWLDK
Sbjct: 29 GPLSRDSVFRKKTDRVVLAHHN-LKNQVGLSGGYKDEVAVDPFARAIEWGDVSLRQWLDK 87
Query: 75 PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134
P+RSVD +ECLHIFRQIV IV AHSQGIVVHNVRPSCFVM+SFNHVSFIESASCSDSGS
Sbjct: 88 PERSVDEFECLHIFRQIVGIVNLAHSQGIVVHNVRPSCFVMTSFNHVSFIESASCSDSGS 147
Query: 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194
DS E+GLN++ +E K+ SS LP D+ Q RTRLR ED Q + P N LSEASC+QSSS +
Sbjct: 148 DSLEDGLNSRTLEVKNPSSLLPNDIFQLRTRLRSEDFQPASTPINALSEASCIQSSSVHA 207
Query: 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254
THV + E +E K D + ++ EE+KQPFPMKQILLMET+WY SPEE G+P SCASD
Sbjct: 208 THVPVGENTEEDKANDRTIIEQEEEERKQPFPMKQILLMETSWYTSPEEATGSPSSCASD 267
Query: 255 IYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
IYRLGVLLFELFCPFS+ E+K+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHPEPS RP
Sbjct: 268 IYRLGVLLFELFCPFSSREDKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRP 327
Query: 315 KMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVS 374
KM ELLQSEFLNEPR+++EEREAAI+L E+I+E++LLL+FLLL+QQRKQE+A KLQD VS
Sbjct: 328 KMCELLQSEFLNEPRENLEEREAAIQLSERIEEQDLLLDFLLLIQQRKQEAADKLQDTVS 387
Query: 375 FICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRP 434
+CSDIEEV K + L+KKGG S E DD N+P +I+DND S+++GSRKRFRP
Sbjct: 388 LLCSDIEEVLKHRTFLKKKGG--SCLERMKDDNLVSNLPPFSIVDNDDSSSLGSRKRFRP 445
Query: 435 ELQLHHLEECDDNLDDNQKHNL-TGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG 493
+Q+ ++EE DDN DD Q ++ T +++ L KSSRLMKNFKKLESAYFLTRCRP++ SG
Sbjct: 446 GIQIFNMEEFDDNRDDAQHSDMVTESQDSLLLKSSRLMKNFKKLESAYFLTRCRPIRSSG 505
Query: 494 RPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL 553
+P +R+S +SSDGR S +V+ERSSINNL KE + E R+SGWI+PFLEGLCKYLSF+KL
Sbjct: 506 KPFIRYSPISSDGRGST-VVSERSSINNLAPKEQHVESRQSGWISPFLEGLCKYLSFNKL 564
Query: 554 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613
++KADL QGDLLNSSNLVCSLSFDRDGE FA AGVNKKIK+FECDAIINENRDIHYPVVE
Sbjct: 565 KIKADLKQGDLLNSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDAIINENRDIHYPVVE 624
Query: 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673
+A+RSKLSS+CWNSYIKSQIASSNFEGVVQVWD++RSQVLTEMREHERRVWSIDFSSADP
Sbjct: 625 IATRSKLSSVCWNSYIKSQIASSNFEGVVQVWDITRSQVLTEMREHERRVWSIDFSSADP 684
Query: 674 TLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLR 733
T LASGSDD SVKLW+INQGVSIGTI+TKANVC VQFPLDS RSLAFGSADH++YYYDLR
Sbjct: 685 TTLASGSDDCSVKLWNINQGVSIGTIRTKANVCSVQFPLDSSRSLAFGSADHKVYYYDLR 744
Query: 734 NSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHT 793
N+K+PLCTL+GHNKTVSYV+F+D+T LVSASTDNTLKLWDLSMC SR+IDTPL SFTGH
Sbjct: 745 NAKVPLCTLVGHNKTVSYVRFIDSTNLVSASTDNTLKLWDLSMCASRIIDTPLQSFTGHM 804
Query: 794 NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISS 853
NVKNFVGLSV DGY+ATGSETNEVF+YHKAFPMPALSF FN+ DPLSG E DD AQFISS
Sbjct: 805 NVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFNNTDPLSGHEMDDPAQFISS 864
Query: 854 VCWRGQSSNTLVAANSSGNIKILEMV 879
VCWR QSS TLVAANS+GNIKILEMV
Sbjct: 865 VCWRSQSS-TLVAANSTGNIKILEMV 889
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493656|ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1235 bits (3195), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/886 (72%), Positives = 725/886 (81%), Gaps = 18/886 (2%)
Query: 2 NPRLLRGERFGVRGDDSND---FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFV 58
NPR R G+ G S+D RK D V +H + +NQ G+S VC+++ A+DPFV
Sbjct: 28 NPRQRHANRIGLSGGASHDSGFISGRKERDHVLSSHTKNHKNQVGISQVCDDDVALDPFV 87
Query: 59 HAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF 118
AIEWGDVSLR WLDKP+R VD ECLHIF QI EIV AAHSQG+VV+NVRPSCFVMSSF
Sbjct: 88 RAIEWGDVSLRHWLDKPERRVDALECLHIFTQIAEIVNAAHSQGVVVNNVRPSCFVMSSF 147
Query: 119 NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178
NHVSFIES SCSDSGSDS E+G N+ E LSS LP D+ R++R ED PT
Sbjct: 148 NHVSFIESVSCSDSGSDSLEDGSNSHTEEDNGLSS-LPDDLHLRKSRSGNEDFLPTIMPT 206
Query: 179 ND----LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 234
N LSE SCMQSSS THV LVE +E+K D R +VEQ EEKKQ FPMK+ILLME
Sbjct: 207 NASQIVLSETSCMQSSSVSATHVTLVEDREEYKSTDRR-SVEQSEEKKQTFPMKEILLME 265
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLK 294
TNWY SPEE++GA SCASDIY+LGVLLFELFC FS+ EEK+RTMS LRHRVLPPQLLLK
Sbjct: 266 TNWYTSPEEISGAQTSCASDIYQLGVLLFELFCTFSSREEKSRTMSCLRHRVLPPQLLLK 325
Query: 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEF 354
+PKEASFCLWLLHPEPS RPK+ EL QSEFL EPRD MEEREAAIELRE+I+E+ELLLEF
Sbjct: 326 WPKEASFCLWLLHPEPSSRPKISELFQSEFLTEPRDKMEEREAAIELRERIEEQELLLEF 385
Query: 355 LLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPS 414
LLL+QQRKQ + KLQD +SF+ SDIEEV KQQA LRK+GG S+ EL DD S ++
Sbjct: 386 LLLMQQRKQGAVDKLQDTISFLSSDIEEVGKQQATLRKRGG--SYQELVKDDQSTSDLSP 443
Query: 415 LNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTG-NEERSLFKSSRLMKN 473
+++ +N+ S ++ S KRFR +HH++E DD L++ QK + N E + KSSRLMKN
Sbjct: 444 MDVDENEDSTSVRSSKRFRQ--GVHHIKELDDTLNNGQKLGMNAENPEILISKSSRLMKN 501
Query: 474 FKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRR 533
FKKLESAY LTR +P KPSG+P + S SS+GR S +V ERSS+NNL SK+ Y+E +
Sbjct: 502 FKKLESAYLLTRRKPTKPSGKPSNKISPPSSNGRGS-IVVTERSSVNNLASKDQYNEHGQ 560
Query: 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIK 593
SGWINPFL+GLCKYLSFSKL+VKADL QGDLLNSSNLVCS+SFDRDGELFA AGVNKKIK
Sbjct: 561 SGWINPFLDGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSVSFDRDGELFATAGVNKKIK 620
Query: 594 VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL 653
VFEC++I+NE+RDIHYP+VEMA RSKLSSICWNSYIKSQIASSNFEGVVQVWDV+RSQVL
Sbjct: 621 VFECNSILNEDRDIHYPLVEMACRSKLSSICWNSYIKSQIASSNFEGVVQVWDVTRSQVL 680
Query: 654 TEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLD 713
TEMREHERRVWSID+S ADPT+LASGSDDGSVKLWSINQGVS+GTIKTKANVCCVQF D
Sbjct: 681 TEMREHERRVWSIDYSLADPTMLASGSDDGSVKLWSINQGVSVGTIKTKANVCCVQFTPD 740
Query: 714 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWD 773
SGR LAFGSADHRIYYYDLRNSKIPLCTL+GHNKTVSYVKFVD+T LVSASTDNTLKLWD
Sbjct: 741 SGRYLAFGSADHRIYYYDLRNSKIPLCTLLGHNKTVSYVKFVDSTHLVSASTDNTLKLWD 800
Query: 774 LSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNF 833
LSMCT+RV++ PL SFTGH NVKNFVGLSV DGY+ATGSE NEV +YHKAFPMPAL+F F
Sbjct: 801 LSMCTARVLEGPLQSFTGHQNVKNFVGLSVSDGYIATGSEANEVVIYHKAFPMPALTFKF 860
Query: 834 NHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
N D S E+DD+AQFISSVCWRGQSS TLVAANS+GNIKILEMV
Sbjct: 861 NSMD--SDHESDDSAQFISSVCWRGQSS-TLVAANSAGNIKILEMV 903
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542282|ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1227 bits (3175), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/880 (70%), Positives = 718/880 (81%), Gaps = 16/880 (1%)
Query: 2 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRN-QGGLSGVCENEAAIDPFVHA 60
N R+ +R G+ S D RK D V L G +N GG SG+CE+E +DPF A
Sbjct: 27 NQRVHCPQRNPFSGEASQDSGFRKERDRVLLAQGGQPKNLGGGFSGLCEDEVEVDPFFCA 86
Query: 61 IEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH 120
+EWGD+SLRQWLDKP+RSVD +ECLHIFRQIVEIV AHSQG+VVHNVRPSCFVMSSFNH
Sbjct: 87 VEWGDISLRQWLDKPERSVDAFECLHIFRQIVEIVSVAHSQGVVVHNVRPSCFVMSSFNH 146
Query: 121 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED-LQLVTAPTN 179
+SFIESASCSD+GSDS +G+N Q E K +S P DM Q+ L ED + + T+ T
Sbjct: 147 ISFIESASCSDTGSDSLGDGMNNQGGEVKTPTSLCPHDMHQQS--LGSEDFMPIKTSTTP 204
Query: 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239
S++SCM SS+ Y L+E +E+K+ D R + E+VE KKQ FPMKQILLME +WY
Sbjct: 205 ARSDSSCMLSSAVYAARASLIEETEENKMKDRRKD-EEVEGKKQSFPMKQILLMEMSWYT 263
Query: 240 SPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 299
SPEE AG SCASD+YRLGVLLFELFCP S+ EEK+RTMSSLRHRVLPPQLLLK+PKEA
Sbjct: 264 SPEEGAGESSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEA 323
Query: 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQ 359
SFCLWLLHP+P RP +GELLQSEFLNE RD EEREAAIELR++I+++ELLLEFLLL+Q
Sbjct: 324 SFCLWLLHPDPKSRPTLGELLQSEFLNEQRDDTEEREAAIELRQRIEDQELLLEFLLLLQ 383
Query: 360 QRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIID 419
QRKQE A+KLQ VSF+CSDIEEV+KQ ++ G AEL +D+ S + PS+ +D
Sbjct: 384 QRKQEVAEKLQHTVSFLCSDIEEVTKQHVRFKEITG----AELGSDERSASSFPSMTFVD 439
Query: 420 NDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLES 479
++ SA +G+RKR R + + ++EECDD++ D+QK N + L KSSRLMKNFKKLES
Sbjct: 440 SEDSAFLGTRKRVRLGMDVKNIEECDDDVGDDQKSNGS-----FLSKSSRLMKNFKKLES 494
Query: 480 AYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINP 539
AYFLTRCRP SG+ VRH ++SDGR S +V ERS IN+L SKE EG S WINP
Sbjct: 495 AYFLTRCRPAYSSGKLAVRHPPVTSDGRGS-VVVTERSCINDLKSKEQCREGA-SAWINP 552
Query: 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA 599
FLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSFDRDGE FA AGVNKKIKVFECD+
Sbjct: 553 FLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDS 612
Query: 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH 659
IINE+RDIHYPVVEMASRSKLSSICWN+YIKSQIASSNFEGVVQ+WDV+RSQV++EMREH
Sbjct: 613 IINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQVISEMREH 672
Query: 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLA 719
ERRVWSIDFSSADPT+LASGSDDGSVKLWSINQGVS+GTIKTKANVCCVQFPLDS R LA
Sbjct: 673 ERRVWSIDFSSADPTMLASGSDDGSVKLWSINQGVSVGTIKTKANVCCVQFPLDSARFLA 732
Query: 720 FGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTS 779
FGSADHRIYYYDLRN K+PLCTL+GHNKTVSY+KFVD LVSASTDNTLKLWDLS C S
Sbjct: 733 FGSADHRIYYYDLRNLKMPLCTLVGHNKTVSYIKFVDTVNLVSASTDNTLKLWDLSTCAS 792
Query: 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL 839
RVID+P+ SFTGH NVKNFVGLSV DGY+ATGSETNEVF+YHKAFPMPALSF F + DPL
Sbjct: 793 RVIDSPIQSFTGHANVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFQNTDPL 852
Query: 840 SGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
SG E DDA QF+SSVCW GQSS+TL+AANS+GN+KILEMV
Sbjct: 853 SGNEVDDAVQFVSSVCWHGQSSSTLLAANSTGNVKILEMV 892
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356546870|ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1224 bits (3167), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 625/880 (71%), Positives = 717/880 (81%), Gaps = 17/880 (1%)
Query: 2 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRN-QGGLSGVCENEAAIDPFVHA 60
N R+ +R G+ S D RK D L G +N GG SG+CE+E +DPF A
Sbjct: 28 NQRVHCPQRNPFLGEASQDSGFRKERDRFLLAQGGQPKNLGGGFSGLCEDEVEVDPFFCA 87
Query: 61 IEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH 120
+EWGD+SLRQWLDKP+RSV +ECLHIFRQIVEIV AHSQG+VVHNVRPSCFVMSSFNH
Sbjct: 88 VEWGDISLRQWLDKPERSVGAFECLHIFRQIVEIVSVAHSQGVVVHNVRPSCFVMSSFNH 147
Query: 121 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV-TAPTN 179
+SFIESASCSD+GSDS EGLN Q E K +S P DM Q+ + ED V T T
Sbjct: 148 ISFIESASCSDTGSDSLGEGLNNQGGEVKTPTSLCPHDMPQQS--MGSEDFMPVKTLTTP 205
Query: 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239
S++SCM SS+ Y L+E +E+K+ D R + ++VE KKQ FPMKQILLME +WY
Sbjct: 206 AQSDSSCMLSSAVYAARASLIEETEENKMKDRRKD-DEVEGKKQSFPMKQILLMEMSWYT 264
Query: 240 SPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 299
SPEE AG SCASD+YRLGVLLFELFCP S+ EEK+RTMSSLRHRVLPPQLLLK+PKEA
Sbjct: 265 SPEEGAGESSSCASDVYRLGVLLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEA 324
Query: 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQ 359
SFCLWLLHP+PSGRP +GELLQS+FLNE RD MEEREAAIELR++ID++ELLLEFLLL+Q
Sbjct: 325 SFCLWLLHPDPSGRPTLGELLQSDFLNEQRDDMEEREAAIELRQRIDDQELLLEFLLLLQ 384
Query: 360 QRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIID 419
QRKQE A+KLQ VSF+CSDIEEV+KQ ++ G AEL +D+ S + PS+ ++D
Sbjct: 385 QRKQEVAEKLQHTVSFLCSDIEEVTKQHVRFKEITG----AELGSDEHSASSFPSMTVVD 440
Query: 420 NDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLES 479
++ SA +G+RKR R + + ++EEC D++ D+QK N + L KSSRLMKNFKKLES
Sbjct: 441 SEGSAFLGTRKRVRLGMDVKNIEECVDDVGDDQKSNGS-----FLSKSSRLMKNFKKLES 495
Query: 480 AYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINP 539
AYFLTRCRP SG+ VRH ++SDGR S ++ ERS IN+L SKE EG S WINP
Sbjct: 496 AYFLTRCRPAYSSGKLAVRHPPVTSDGRGS-VVMTERSCINDLKSKEQCREGA-SAWINP 553
Query: 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA 599
FLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSFDRDGE FA AGVNKKIKVFECD+
Sbjct: 554 FLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDS 613
Query: 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH 659
IINE+RDIHYPVVEMASRSKLSSICWN+YIKSQIASSNFEGVVQ+WDV+RSQV++EMREH
Sbjct: 614 IINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSNFEGVVQLWDVTRSQVISEMREH 673
Query: 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLA 719
ERRVWSIDFSSADPT+LASGSDDGSVKLWSINQGVS+GTIKTKANVCCVQFPLDS R LA
Sbjct: 674 ERRVWSIDFSSADPTMLASGSDDGSVKLWSINQGVSVGTIKTKANVCCVQFPLDSARFLA 733
Query: 720 FGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTS 779
FGSADHRIYYYDLRN K+PLCTL+GHNKTVSY+KFVD LVSASTDNTLKLWDLS C S
Sbjct: 734 FGSADHRIYYYDLRNLKMPLCTLVGHNKTVSYIKFVDTVNLVSASTDNTLKLWDLSTCAS 793
Query: 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL 839
RVID+P+ SFTGH NVKNFVGLSV DGY+ATGSETNEVF+YHKAF MPALSF F + DPL
Sbjct: 794 RVIDSPIQSFTGHANVKNFVGLSVSDGYIATGSETNEVFIYHKAFSMPALSFKFQNTDPL 853
Query: 840 SGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
SG E DDAAQF+SSVCWRGQSS TL+AANS+GN+KILEMV
Sbjct: 854 SGNEVDDAAQFVSSVCWRGQSS-TLLAANSTGNVKILEMV 892
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357452949|ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|355485799|gb|AES67002.1| SPA1-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1197 bits (3098), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/870 (69%), Positives = 706/870 (81%), Gaps = 27/870 (3%)
Query: 15 GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAI-DPFVHAIEWGDVSLRQWLD 73
G+ S D RK D + GD +N GG CE E DPF ++EWGD+SLRQWLD
Sbjct: 28 GEGSQDSRFRKERDWIHGAQGDQNKNLGGF---CEGEEVENDPFFSSVEWGDISLRQWLD 84
Query: 74 KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133
KP RSVD +ECLHIFRQIVEIV AAH QG+VVHNVRPSCFVMSSFNH+SFIESASCSD+
Sbjct: 85 KPDRSVDFFECLHIFRQIVEIVNAAHCQGVVVHNVRPSCFVMSSFNHISFIESASCSDTS 144
Query: 134 SDSHEEGLNT-QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192
SDS +G+N Q +E K +S P D++ +++ ED T+ S++SCM SS+
Sbjct: 145 SDSLGDGVNNDQGVEVKTPTSHCPRDIMHQQS-FGSEDFMPAKISTDARSDSSCMLSSAV 203
Query: 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252
Y L+E +E+K+ D R + E+VE KKQ FPMKQILLME +WY SPEE+AG P SCA
Sbjct: 204 YAARASLIEETEENKMKDMRKD-EEVEGKKQSFPMKQILLMEMSWYTSPEEVAGTPSSCA 262
Query: 253 SDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSG 312
SD+YRLG+LLFELFCP S+ EEK+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHP+PS
Sbjct: 263 SDVYRLGILLFELFCPLSSREEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSS 322
Query: 313 RPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDI 372
RP +GELLQSEFLNE RD MEEREAAIELR++I++EELLLEFL L++QRKQE A+KLQ
Sbjct: 323 RPTLGELLQSEFLNEQRDDMEEREAAIELRQKIEDEELLLEFLSLLKQRKQEVAEKLQHT 382
Query: 373 VSFICSDIEEVSKQQAILRKKGGLGSFAELA-NDDLSGLNIPSLNIIDNDCSATMGSRKR 431
+SF+CSDIEEV+K+Q ++ G+ EL +DD S PS+ +ID++ SA +G+RKR
Sbjct: 383 ISFLCSDIEEVTKKQTRFKEIAGV----ELGGSDDRSASTFPSMTVIDSEDSACLGTRKR 438
Query: 432 FRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP 491
R + HL+ECDDN++ +QK N L K+SRLMKNFKKLESAYFLTRC+P
Sbjct: 439 VRLGM---HLDECDDNMESDQK-----NHGSFLSKNSRLMKNFKKLESAYFLTRCKPTYS 490
Query: 492 SGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGR--RSGWINPFLEGLCKYLS 549
SGRP VRHS +++ GR S +++ERS IN+L K+ +GR S WINPFLEGLCKYLS
Sbjct: 491 SGRPGVRHSTIANGGRGS-VVMSERSCINSLALKD---QGRDSASAWINPFLEGLCKYLS 546
Query: 550 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHY 609
FSKL+VKADL QGDLL+SSNLVCSLSFDRDGE FA AGVNKKIK+FECD II +RDIHY
Sbjct: 547 FSKLKVKADLKQGDLLHSSNLVCSLSFDRDGEFFATAGVNKKIKIFECDTIIKGDRDIHY 606
Query: 610 PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669
PVVEMA RSKLSS+CWN+YIKSQIASSNFEGVVQ+WDV+RSQ+L+EMREHERRVWSIDFS
Sbjct: 607 PVVEMACRSKLSSLCWNTYIKSQIASSNFEGVVQLWDVTRSQILSEMREHERRVWSIDFS 666
Query: 670 SADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYY 729
SADPT+LASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDS R LAFGSADHRIYY
Sbjct: 667 SADPTMLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSARYLAFGSADHRIYY 726
Query: 730 YDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 789
YDLRN ++PLCTL+GHNKTVSY+KFVD LVSASTDNTLKLWDLS CTSRV+D+P+ SF
Sbjct: 727 YDLRNLRVPLCTLVGHNKTVSYIKFVDNVNLVSASTDNTLKLWDLSTCTSRVVDSPIQSF 786
Query: 790 TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQ 849
TGHTNVKNFVGLSV DGY+ATGSETNEVFVYHKAFPMPAL F F + DP+SG E DDAAQ
Sbjct: 787 TGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPALQFKFQNTDPISGNEVDDAAQ 846
Query: 850 FISSVCWRGQSSNTLVAANSSGNIKILEMV 879
F+SSVCWRGQS TL+AANS+GN+KILEMV
Sbjct: 847 FVSSVCWRGQSP-TLIAANSTGNVKILEMV 875
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128308|ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1194 bits (3090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 628/860 (73%), Positives = 707/860 (82%), Gaps = 42/860 (4%)
Query: 23 LRKHSDGVELTHGDHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81
RK +D V L +L+NQ G LSGVCE+EAA+D FV +EW DVSLR WL+KP+RSVD
Sbjct: 37 FRKETDRVVLAR-QNLKNQAGTLSGVCEDEAAVDHFVQNMEWNDVSLRHWLNKPERSVDE 95
Query: 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGL 141
+ECLHIFRQIVEIV AHSQGIVVHNVRPSCFVMSSFNHVSFIESAS SDSGSDS ++GL
Sbjct: 96 FECLHIFRQIVEIVNVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASYSDSGSDSLDDGL 155
Query: 142 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 201
N Q +E K+ SS DM Q+R ++ L E
Sbjct: 156 NRQTVEVKNASS-FSHDMCQQR--------------------------------NLPLGE 182
Query: 202 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261
+E+K+L R NVE EE+KQPFPMKQILLME++WY SPEE+AG+P SCASDIY+LGVL
Sbjct: 183 ETEENKVLGTR-NVEHEEERKQPFPMKQILLMESSWYTSPEEVAGSPSSCASDIYQLGVL 241
Query: 262 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
LFELF PF++ E+K+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHPEPS RPKMGELLQ
Sbjct: 242 LFELFSPFTSREDKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKMGELLQ 301
Query: 322 SEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIE 381
SEFLNEPRD +EEREAAI+LRE+I+E+ELLLEFLL +QQRKQ++A KLQ VS +CSDIE
Sbjct: 302 SEFLNEPRDYLEEREAAIQLRERIEEQELLLEFLLPMQQRKQDAANKLQGTVSLLCSDIE 361
Query: 382 EVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHL 441
EV+K Q L+KKG + E D N+P LNI D D S+++GSRKRF LQ+ +
Sbjct: 362 EVTKHQTFLKKKGS--TCKERGEGDHLASNLPPLNIYDIDDSSSLGSRKRFCSGLQILNT 419
Query: 442 EECDDNLDDNQKHN-LTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRP-LVRH 499
E CDDNL++ + + ++E LF+SSRLMKNFKKLESAYFLTR RPV+P G+P VR+
Sbjct: 420 EGCDDNLNEGRNSDTFVESQESPLFRSSRLMKNFKKLESAYFLTRSRPVRPPGKPPFVRN 479
Query: 500 SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADL 559
S +S DGR S +V ERSSIN+L K+ + +GR+SGWI+PFLEGLCKYLS+SKL+VKADL
Sbjct: 480 SPVSGDGRGSI-VVTERSSINSLALKDRFIKGRQSGWISPFLEGLCKYLSYSKLKVKADL 538
Query: 560 NQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 619
QGDLLNSSNLVCSLSFDRDGE FA AGVNKKIKVFECD IINE RDIHYPVVEM SRSK
Sbjct: 539 KQGDLLNSSNLVCSLSFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVSRSK 598
Query: 620 LSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASG 679
LSSICWN YI SQIASSNFEGVVQVWDV+RSQV+TEMREHERRVWSIDFSSADPT+LASG
Sbjct: 599 LSSICWNRYITSQIASSNFEGVVQVWDVTRSQVVTEMREHERRVWSIDFSSADPTMLASG 658
Query: 680 SDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPL 739
SDDGSVKLWSINQGVSIG+IKTKANVC VQFP+DS RS+AFGSADHRIYYYDLRNSK+PL
Sbjct: 659 SDDGSVKLWSINQGVSIGSIKTKANVCSVQFPMDSSRSIAFGSADHRIYYYDLRNSKVPL 718
Query: 740 CTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV 799
CTLIGHNKTVSYVKFVD T +VSASTDNTLKLWDLSM TSRVID PL SFTGH NVKNFV
Sbjct: 719 CTLIGHNKTVSYVKFVDTTNIVSASTDNTLKLWDLSMGTSRVIDNPLQSFTGHMNVKNFV 778
Query: 800 GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQ 859
GLSV DGY+ATGSETNEVFVYHKAFPMP LSF FN+ DPLSG E DDAAQFISSVCWRGQ
Sbjct: 779 GLSVSDGYIATGSETNEVFVYHKAFPMPVLSFKFNNTDPLSGHEMDDAAQFISSVCWRGQ 838
Query: 860 SSNTLVAANSSGNIKILEMV 879
SS TLVAANS+GNIKILEMV
Sbjct: 839 SS-TLVAANSTGNIKILEMV 857
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114936|ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1184 bits (3064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 616/859 (71%), Positives = 707/859 (82%), Gaps = 49/859 (5%)
Query: 24 RKHSDGVELTHGDHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82
++ +D V L +L+NQ G LSGVCE+EAA+D F+ IEW DVSLR WLDKP+RSV+ +
Sbjct: 39 KERTDRVVLAR-QNLKNQAGTLSGVCEDEAAVDRFMQTIEWNDVSLRHWLDKPQRSVNEF 97
Query: 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLN 142
EC HIFRQ+VE+V AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS ++GLN
Sbjct: 98 ECSHIFRQVVEVVNVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLDDGLN 157
Query: 143 TQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEG 202
++ ME K+ SS LP DM Q+R +V LVE
Sbjct: 158 SETMEVKNSSSSLPHDMCQQR--------------------------------NVPLVEE 185
Query: 203 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262
+EHK+ D R NVE EE+KQPFPMKQILLME+ WY SPEE AG+P SCASDIYRLGVLL
Sbjct: 186 TEEHKVHDMR-NVEHEEERKQPFPMKQILLMESCWYTSPEEDAGSPSSCASDIYRLGVLL 244
Query: 263 FELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322
FELFCPF++ E+K+RTMSSLRHRVLPPQLLLK+ KEASFCLWLLHPEPS RPK+GELLQS
Sbjct: 245 FELFCPFTSSEDKSRTMSSLRHRVLPPQLLLKWSKEASFCLWLLHPEPSSRPKIGELLQS 304
Query: 323 EFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEE 382
+FLNEP +++EE EAA +LRE+I+E+ELLLEFLLL+QQRKQ++A KLQD +S +CSDIEE
Sbjct: 305 DFLNEPINNLEELEAATQLRERIEEQELLLEFLLLIQQRKQDAADKLQDTISLLCSDIEE 364
Query: 383 VSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLE 442
V+K Q L+KKG + E D NIP+LN++D D S+++GSRKRF P L++H++E
Sbjct: 365 VTKHQVFLKKKGD--TCKERGEGDHLTSNIPALNVVDIDDSSSLGSRKRFCPGLEIHNVE 422
Query: 443 ECDDNLDDNQKHN-LTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRP-LVRHS 500
+CDDNLD++Q + ++E LF+SSRLMKNFKKLESAYFLTRCRPV+P G+P R+
Sbjct: 423 KCDDNLDESQNSDTFVESQESPLFRSSRLMKNFKKLESAYFLTRCRPVRPPGKPSFARNL 482
Query: 501 QLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN 560
+ SDGR S + ERSSIN++ K+ ++EGRRSGWI+PFLEGLCKYLSFSKL+VKADL
Sbjct: 483 PVISDGRISI-VATERSSINSIAPKQQFTEGRRSGWISPFLEGLCKYLSFSKLKVKADLK 541
Query: 561 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 620
QGDLLNSSNLVCS+SFDRDGE FA AGVNKKIKVFECD IINE RDIHYPVVEM RSKL
Sbjct: 542 QGDLLNSSNLVCSISFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVCRSKL 601
Query: 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680
SSICWNSYIKSQ+ASSNFEGVVQVWDV+RSQV+TEMREHERRVWS+DFSSADPT+LASGS
Sbjct: 602 SSICWNSYIKSQLASSNFEGVVQVWDVTRSQVVTEMREHERRVWSVDFSSADPTMLASGS 661
Query: 681 DDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLC 740
DDGS GVSIG+IKTKAN+CCVQFPLDS S+AFGSADHRIYYYDLRNSK+PLC
Sbjct: 662 DDGS--------GVSIGSIKTKANICCVQFPLDSSCSIAFGSADHRIYYYDLRNSKVPLC 713
Query: 741 TLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800
TLIGHNKTVSYVKFVD T LVSASTDNTLKLWDLSM TSRVID+P+ SFTGH N KNFVG
Sbjct: 714 TLIGHNKTVSYVKFVDMTNLVSASTDNTLKLWDLSMGTSRVIDSPVQSFTGHMNAKNFVG 773
Query: 801 LSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQS 860
LSV DGY+ATGSETNEVFVYHKAFPMP LSF FN+ DPLSG E DD AQFISSVCWRGQS
Sbjct: 774 LSVADGYIATGSETNEVFVYHKAFPMPVLSFKFNNTDPLSGHEMDDTAQFISSVCWRGQS 833
Query: 861 SNTLVAANSSGNIKILEMV 879
S TLVAANS+GNIKILEMV
Sbjct: 834 S-TLVAANSTGNIKILEMV 851
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446929|ref|XP_004141223.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus] gi|449498653|ref|XP_004160596.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1175 bits (3039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 604/845 (71%), Positives = 692/845 (81%), Gaps = 15/845 (1%)
Query: 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 95
DHLRN +SGVCE + DP++ + +W D+SLRQWLDKP RSVD ECLHIFRQIVEIV
Sbjct: 20 DHLRNLDDISGVCEEDILADPYLRSHKWSDISLRQWLDKPGRSVDALECLHIFRQIVEIV 79
Query: 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155
AH+QGIVVHNVRPSCFVMSSFNHV+FIESASCSDSGSDS E+G+N+Q E K SSP
Sbjct: 80 NIAHAQGIVVHNVRPSCFVMSSFNHVTFIESASCSDSGSDSLEDGINSQMAEVKTSSSPF 139
Query: 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 215
P + L E + V P N LSE SCMQSSS Y L EG + + D R ++
Sbjct: 140 P-------SSLGSEGFRSVMTPINALSETSCMQSSSIYAAQASLNEGFGKFRKKDRR-HI 191
Query: 216 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 275
E+ E+K Q FPMKQIL MET WY SPEE + +P S ASDIYRLGVLLFELFC FS+ EEK
Sbjct: 192 EETEDKVQSFPMKQILAMETTWYTSPEEASDSPSSSASDIYRLGVLLFELFCSFSSREEK 251
Query: 276 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
RTMSSLRHRVLP QLLLK+PKEASFCLWLLHPEP+ RPK+ ELLQS FLNEP+D +EER
Sbjct: 252 NRTMSSLRHRVLPTQLLLKWPKEASFCLWLLHPEPTNRPKLSELLQSVFLNEPKDDLEER 311
Query: 336 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 395
EAAI+LR++I+E+ELLLEFLLL+QQRKQE+A KLQD +SF+CSDIE+V + Q +K
Sbjct: 312 EAAIKLRKKIEEQELLLEFLLLMQQRKQEAAHKLQDTISFLCSDIEQVMRHQTNFKK--N 369
Query: 396 LGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHN 455
+GS +L D+ LN+PS+ + N SA +GSRKRFRP + H +E C DNLD K +
Sbjct: 370 IGSHTDLVKDNHLPLNLPSMPPVRNTDSAALGSRKRFRPGILTHDIEACGDNLDHCSKTS 429
Query: 456 L-TGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN 514
NE+ LFKSSRLMKNFKKLE AYFL R R KPS R V+HS +SSDGR S L
Sbjct: 430 SENDNEQGVLFKSSRLMKNFKKLELAYFLMRGRVNKPS-RQFVKHSSVSSDGRGSVVLT- 487
Query: 515 ERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSL 574
ERSS+NNL SKE ++ R+ GWI+PFLEGLCKYLSFSKL+VKADL QGDLLNSSNLVCSL
Sbjct: 488 ERSSVNNLASKESCNDNRQGGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSL 547
Query: 575 SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 634
SFDRDGE FA AGVN+KIKVF D+I+NE+RDIHYPVVEMASRSKLSS+CWN YIKSQIA
Sbjct: 548 SFDRDGEFFATAGVNRKIKVFGYDSIVNEDRDIHYPVVEMASRSKLSSVCWNRYIKSQIA 607
Query: 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694
SSNFEGVVQVWDV+RSQV+TEM EHERRVWSIDFSSADPT+LASGSDDGSVKLWSINQG+
Sbjct: 608 SSNFEGVVQVWDVTRSQVVTEMGEHERRVWSIDFSSADPTILASGSDDGSVKLWSINQGI 667
Query: 695 SIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKF 754
SIGTI+TKANVCCVQFP+DSGRSLAFGSADH+IYYYD+RN ++PLCT GHNKTVSYVK+
Sbjct: 668 SIGTIRTKANVCCVQFPVDSGRSLAFGSADHKIYYYDMRNIRVPLCTFTGHNKTVSYVKY 727
Query: 755 VDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSET 814
+D++TLVSASTDNTLKLWDLSM TSRV+D+P+ SFTGH N+KNFVGLSV DGY+ATGSET
Sbjct: 728 IDSSTLVSASTDNTLKLWDLSMSTSRVVDSPVQSFTGHMNIKNFVGLSVSDGYIATGSET 787
Query: 815 NEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 874
NEVFVYHKAFPMPALS+ F DPLS E DD+AQFISSVCWR QSS +LVAANS+G+IK
Sbjct: 788 NEVFVYHKAFPMPALSYKF-QIDPLSSHEMDDSAQFISSVCWRSQSS-SLVAANSTGHIK 845
Query: 875 ILEMV 879
ILEMV
Sbjct: 846 ILEMV 850
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|75335085|sp|Q9LJR3.1|SPA3_ARATH RecName: Full=Protein SPA1-RELATED 3 gi|9294263|dbj|BAB02165.1| photomorphogenesis repressor protein-like [Arabidopsis thaliana] gi|330688323|gb|AEC32932.1| SPA3 isoform 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 556/839 (66%), Positives = 671/839 (79%), Gaps = 61/839 (7%)
Query: 49 ENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108
++ IDPFV ++EWGDVSLRQWLDKP+RSVDV+ECLH+FRQIVEIV AAHSQGIVVHNV
Sbjct: 59 DDSLGIDPFVRSLEWGDVSLRQWLDKPERSVDVFECLHVFRQIVEIVNAAHSQGIVVHNV 118
Query: 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 168
RPSCFVMSSFNHVSFIESASCSDSGSDS E+G +Q K++ S RR
Sbjct: 119 RPSCFVMSSFNHVSFIESASCSDSGSDSLEDGPISQ----KEIGSS------------RR 162
Query: 169 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK 228
E+ +S+A ++ Y +K+L+ ++ + EEK QPFPMK
Sbjct: 163 EEA---------VSKAIAIEEKGVY------------NKLLERKIEKLE-EEKTQPFPMK 200
Query: 229 QILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP 288
IL MET+WY SPEE G+ +CASD+YRLGVLLFELFCP + EEK+RTMSSLRHRVLP
Sbjct: 201 HILAMETSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEKSRTMSSLRHRVLP 260
Query: 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEE 348
PQ+LLK PKEASFCLWLLHPEP+ RP M +LLQSEF+ EPRD++EEREAAIELR++I+E+
Sbjct: 261 PQILLKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRDNLEEREAAIELRDRIEEQ 320
Query: 349 ELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDD-- 406
E LLEFLLL+QQRKQESA +LQD VS + SDIE+V K+Q IL+K+G S ++ + DD
Sbjct: 321 ESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRGS--SLSDFSKDDHQ 378
Query: 407 -LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDNQKHNLTGNEERSL 464
SG + S + + SA + SRKR R L L + E D+ ++ +L
Sbjct: 379 YTSGQPLMSFQA-NEEPSAFLASRKRVRQGILALENGVEVDEE-----------SQGSTL 426
Query: 465 FKSSRLMKNFKKLESAYFLTRCRPVKP--SGRPLVRHSQLSSDGRTSKPLVNERSSINNL 522
+SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+ +V+E+SS++N
Sbjct: 427 LESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRGSMIVSEKSSVSNP 486
Query: 523 GSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG 580
+ + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNSSNLVC+L+FDR+G
Sbjct: 487 VAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNSSNLVCALAFDREG 546
Query: 581 ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640
ELFA AGVNKKIK+FEC++I+N+NRDIHYPVVE+A RSKLSS+CWNSYIKSQIASSNF+G
Sbjct: 547 ELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNSYIKSQIASSNFDG 606
Query: 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 700
VVQ+WDV+RSQ++TEM+EH++RVWSID SSADPTLLASGSDDG+VKLWSINQGVSIGTIK
Sbjct: 607 VVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGTVKLWSINQGVSIGTIK 666
Query: 701 TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTL 760
TKANVCCVQFP DSGRSLAFGSADH++YYYDLRN KIPLCT+IGH+KTVSYVKFVD++TL
Sbjct: 667 TKANVCCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKFVDSSTL 726
Query: 761 VSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVY 820
VS+STDNTLKLWDLSM S + ++PLHSFTGHTN+KNFVGLSV DGY+ATGSETNEVFVY
Sbjct: 727 VSSSTDNTLKLWDLSMSASGINESPLHSFTGHTNLKNFVGLSVSDGYIATGSETNEVFVY 786
Query: 821 HKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
HKAFPMP +S+ FN+ D +SG E DDA+QFISS+CWRGQSS TLVAANS+GNIKILEM+
Sbjct: 787 HKAFPMPVMSYMFNNTDSMSGLEVDDASQFISSICWRGQSS-TLVAANSNGNIKILEMM 844
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356545455|ref|XP_003541158.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/817 (66%), Positives = 643/817 (78%), Gaps = 31/817 (3%)
Query: 64 GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSF 123
GD+SLR WLDKP+RSV+V ECLHIFR+IVEIV+ AHSQGIVVHNVRPSCFVMSSFNHVSF
Sbjct: 2 GDISLRLWLDKPERSVNVSECLHIFREIVEIVHVAHSQGIVVHNVRPSCFVMSSFNHVSF 61
Query: 124 IESASCSDSGSDSHEEGLNTQNMETKDLSSPLP-LDMLQRRTRLRREDLQLVTAPTNDLS 182
IESA+CSDSGSD+ EE + + +P P DM Q+R L ED V T L+
Sbjct: 62 IESATCSDSGSDTLEEAVEIKT------PTPTPSYDMHQQRC-LGSEDFVPVKTSTASLT 114
Query: 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242
++SCM SS + L++ +E+K + NR E+V KKQ F KQ+L ME +WY SPE
Sbjct: 115 DSSCMLSSLVFVAPASLIDDTEENK-MKNRRKDEEVAVKKQSFSTKQVLQMEASWYTSPE 173
Query: 243 ELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFC 302
E AGA SCASD+YRLGVLLFELFCP + EEK+RTMS LRHRVLPPQLLLK+PKEASFC
Sbjct: 174 EFAGASPSCASDVYRLGVLLFELFCPLISREEKSRTMSGLRHRVLPPQLLLKWPKEASFC 233
Query: 303 LWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRK 362
LWLLHPEP+ RP +G+LLQSEFLNEPRD +E EAA+E+RE+ID++ELL EFL L+QQ+K
Sbjct: 234 LWLLHPEPNSRPTIGQLLQSEFLNEPRDDIENCEAAVEVRERIDDQELLQEFLSLIQQKK 293
Query: 363 QESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDC 422
+E+A+KLQ +SF+CSDIEE +KQ+ + + G G DD + PS+ ++DN+
Sbjct: 294 EEAAEKLQHTISFLCSDIEEATKQKTLFNEITGTGL------DDCTTSTFPSITVVDNEE 347
Query: 423 SATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYF 482
SA +G+RKR R + E D+N+ D+QK N+ L K+ R + N +KLESAYF
Sbjct: 348 SACLGTRKRVRTIPCVDDTEGIDNNMSDDQK-----NDRSILSKTPRFLNNLQKLESAYF 402
Query: 483 LTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLE 542
LTRC+ SG+ V+HS + +D ERS +N + KE + EG+ S W NPFLE
Sbjct: 403 LTRCKSAYSSGKLAVQHSPIGTD---------ERSCVNKVALKEKFREGK-SPWTNPFLE 452
Query: 543 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN 602
GL KYLSFSKL+VKADL QGDLL SSNLVCSLSFDRD E FA AGVNKKIKVFEC+ IN
Sbjct: 453 GLSKYLSFSKLKVKADLKQGDLLQSSNLVCSLSFDRDAEYFATAGVNKKIKVFECNTTIN 512
Query: 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERR 662
E+RDIHYPVVEM SRS LSS CWN+YIKSQIASSNFEGVVQ+WDV+RS V +EMREHE+R
Sbjct: 513 EDRDIHYPVVEMVSRSTLSSTCWNTYIKSQIASSNFEGVVQLWDVTRSHVQSEMREHEQR 572
Query: 663 VWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGS 722
VWSIDFSSADPTLLASGSDDGSVKLW+INQG+S+GTIKTKANVCCVQFPL+ SLAFGS
Sbjct: 573 VWSIDFSSADPTLLASGSDDGSVKLWNINQGISVGTIKTKANVCCVQFPLEFAHSLAFGS 632
Query: 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVI 782
ADHRIYYYDLRN K+PLCTL+GH+KTVSY+KFVD +LVSASTDNTLKLWDLS+C SRVI
Sbjct: 633 ADHRIYYYDLRNLKVPLCTLVGHDKTVSYIKFVDTMSLVSASTDNTLKLWDLSLCASRVI 692
Query: 783 DTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGP 842
D+P+ SFTGH NVKNFVGLSV DGY+ATGSETNEVF+YHKAFPMPALSF F +DPL G
Sbjct: 693 DSPIQSFTGHMNVKNFVGLSVSDGYIATGSETNEVFIYHKAFPMPALSFKFYSSDPLFGN 752
Query: 843 ETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
E DD+ QFI+SVCWRGQSS TL+AANS+GN+KILEM
Sbjct: 753 EEDDSTQFITSVCWRGQSS-TLLAANSTGNVKILEMT 788
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 879 | ||||||
| TAIR|locus:2037005 | 794 | SPA4 "SPA1-related 4" [Arabido | 0.514 | 0.569 | 0.693 | 8.5e-232 | |
| TAIR|locus:2136133 | 1036 | SPA2 "SPA1-related 2" [Arabido | 0.453 | 0.385 | 0.495 | 1e-143 | |
| TAIR|locus:2039139 | 1029 | SPA1 "SUPPRESSOR OF PHYA-105 1 | 0.458 | 0.391 | 0.501 | 2.1e-143 | |
| DICTYBASE|DDB_G0288453 | 970 | DDB_G0288453 "E3 ubiquitin-pro | 0.402 | 0.364 | 0.486 | 2.1e-90 | |
| TAIR|locus:2059359 | 675 | COP1 "CONSTITUTIVE PHOTOMORPHO | 0.411 | 0.536 | 0.461 | 1.3e-86 | |
| UNIPROTKB|Q8NHY2 | 731 | RFWD2 "E3 ubiquitin-protein li | 0.391 | 0.470 | 0.457 | 6.6e-83 | |
| ZFIN|ZDB-GENE-070410-134 | 694 | rfwd2 "ring finger and WD repe | 0.391 | 0.495 | 0.463 | 8.3e-83 | |
| UNIPROTKB|F1MHX1 | 735 | RFWD2 "Uncharacterized protein | 0.391 | 0.468 | 0.455 | 1.1e-82 | |
| MGI|MGI:1347046 | 733 | Rfwd2 "ring finger and WD repe | 0.391 | 0.469 | 0.457 | 1.4e-82 | |
| UNIPROTKB|E2RRJ5 | 733 | RFWD2 "Uncharacterized protein | 0.391 | 0.469 | 0.455 | 3.6e-82 |
| TAIR|locus:2037005 SPA4 "SPA1-related 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1642 (583.1 bits), Expect = 8.5e-232, Sum P(2) = 8.5e-232
Identities = 321/463 (69%), Positives = 378/463 (81%)
Query: 421 DCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESA 480
D + + SRKR R + EE +D+ +++ L E +L +SSRLM+N KKLES
Sbjct: 339 DVRSFLASRKRIRQGAETTAAEEENDDNSIDEESKLDDTLESTLLESSRLMRNLKKLESV 398
Query: 481 YFLTRCRPVKPSG---RPLVRH-SQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGW 536
YF TR R +K + +PL R+ S LS +GR+S E+SS++ SK+ ++ R+ GW
Sbjct: 399 YFATRYRQIKAATAAEKPLARYYSALSCNGRSS-----EKSSMSQ-PSKDPINDSRQGGW 452
Query: 537 INPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXXXXXFDRDGELFAAAGVNKKIKVFE 596
I+PFLEGLCKYLSFSKLRVKADL QGD FDRDGE FA AGVNKKIK+FE
Sbjct: 453 IDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFE 512
Query: 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM 656
C++II + RDIHYPVVE+ASRSKLS ICWNSYIKSQ+ASSNFEGVVQVWDV+R+Q++TEM
Sbjct: 513 CESIIKDGRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARNQLVTEM 572
Query: 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGR 716
+EHE+RVWSID+SSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN+CCVQFP ++GR
Sbjct: 573 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSETGR 632
Query: 717 SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSM 776
SLAFGSADH++YYYDLRN K+PLCT+IGH+KTVSYV+FVD++TLVS+STDNTLKLWDLSM
Sbjct: 633 SLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRFVDSSTLVSSSTDNTLKLWDLSM 692
Query: 777 CTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHA 836
S + +TPLHSF GHTNVKNFVGLSV DGY+ATGSETNEVFVYHKAFPMP LS+ F
Sbjct: 693 SISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTI 752
Query: 837 DPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
DP+S E DDA+QFISSVCWRGQSS TLVAANS+GNIKILEMV
Sbjct: 753 DPVSELEVDDASQFISSVCWRGQSS-TLVAANSTGNIKILEMV 794
|
|
| TAIR|locus:2136133 SPA2 "SPA1-related 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1025 (365.9 bits), Expect = 1.0e-143, Sum P(2) = 1.0e-143
Identities = 205/414 (49%), Positives = 272/414 (65%)
Query: 469 RLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGY 528
RL++N +LESAYF R P R +R + L N +++ + + E +
Sbjct: 635 RLIRNINQLESAYFAARIDAHLPEARYRLRPDR--------DLLRNSDNTVAEVENSETW 686
Query: 529 SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXXXXXFDRDGELFAAAGV 588
S R G F +GLCKY +SK + L + FDRD + FA AGV
Sbjct: 687 SSDDRVG---AFFDGLCKYARYSKFETRGVLRTSELNNTSNVICSLGFDRDEDYFATAGV 743
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
+KKIK++E +++ NE+ DIHYP +EM +RSKLS +CWN+YI++ +ASS+++G+V++WDV+
Sbjct: 744 SKKIKIYEFNSLFNESVDIHYPAIEMPNRSKLSGVCWNNYIRNYLASSDYDGIVKLWDVT 803
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCV 708
Q ++ EHE+R WS+DFS A PT LASGSDD SVKLW+IN+ +GTI+ ANVCCV
Sbjct: 804 TGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNIANVCCV 863
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768
QF S LAFGS+D R Y YDLRN + P C L GHNK VSY KF+D TLV+ASTDNT
Sbjct: 864 QFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTASTDNT 923
Query: 769 LKLWDLSMCTSRVIDTPLHSFT--GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 826
LKLWDL T + T S T GHTN KNFVGLS DGY+A GSETNEV+ YH++ PM
Sbjct: 924 LKLWDLKKTTHGGLSTNACSLTFGGHTNEKNFVGLSTSDGYIACGSETNEVYAYHRSLPM 983
Query: 827 PALSFNFNHADPLSGPETD-DAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
P S+ F DP+SG E + D F+SSVCWR + SN +V+A+S+G+IK+L++V
Sbjct: 984 PITSYKFGSIDPISGKEIEEDNNLFVSSVCWR-KRSNMVVSASSNGSIKVLQLV 1036
|
|
| TAIR|locus:2039139 SPA1 "SUPPRESSOR OF PHYA-105 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1054 (376.1 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
Identities = 209/417 (50%), Positives = 280/417 (67%)
Query: 467 SSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN-ERSSINNLGSK 525
+ RLM N ++LE AYF R + + S ++ R+ K L + +R S N ++
Sbjct: 623 TDRLMSNIRQLEDAYFFMRSQ---------INLSSSAATARSDKTLKDRDRCSENQNENQ 673
Query: 526 EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXXXXXFDRDGELFAA 585
+ ++G+ S + F EGLCK+ +SK + GD FD D E AA
Sbjct: 674 DMSTKGKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAA 733
Query: 586 AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645
AG++KKIK+F+ +A +NE+ +HYP+VEM ++SKLS +CWNSYIK+ +AS++++GVVQ+W
Sbjct: 734 AGISKKIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQIW 793
Query: 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANV 705
D Q ++ EH++R WS+DFS +DPT SGSDD SVKLWSIN+ S+GTI + ANV
Sbjct: 794 DAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPANV 853
Query: 706 CCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSAST 765
CCVQF S LAFGSAD+++Y YDLR K P CTL GH K VSYVKF+D+ T+VSAST
Sbjct: 854 CCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKFMDSETIVSAST 913
Query: 766 DNTLKLWDLSMCTSRVIDTPLHSFT--GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 823
DN+LKLW+L+ S + S T GHTN KNFVGLSV DGY+A GSETNEV+ Y+K+
Sbjct: 914 DNSLKLWNLNKTNSSGLSPGACSLTYKGHTNQKNFVGLSVLDGYIACGSETNEVYSYYKS 973
Query: 824 FPMPALSFNFNHADPLSGPET-DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879
PMP S+ F DP+SG E DD QF+SSVCWR + SN LVAANS+GN+K+L++V
Sbjct: 974 LPMPMTSYKFGSVDPISGNEYFDDNGQFVSSVCWR-KKSNMLVAANSTGNMKLLKLV 1029
|
|
| DICTYBASE|DDB_G0288453 DDB_G0288453 "E3 ubiquitin-protein ligase RFWD2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 874 (312.7 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 179/368 (48%), Positives = 240/368 (65%)
Query: 514 NERSSINNLGSK-EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXX 572
N S++NNL + E G+ G ++ F L K+ +++ +V A L GD
Sbjct: 615 NTNSNLNNLNNNIESLKVGK--GLLS-FSRNLLKFTKYNEFKVLATLKYGDLFNTSSIVS 671
Query: 573 XXXFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 632
FDRD E FA AGV KKIK+FE I +N ++H PV EM RSK+S + WN+YIKSQ
Sbjct: 672 SIEFDRDEEYFATAGVTKKIKIFEFSQI-RDNVEVHSPVKEMTCRSKISCLSWNTYIKSQ 730
Query: 633 IASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692
IASS++EG++ +WD + Q + + EHE+RVWS+DFS DPT LASGSDD VKLWS
Sbjct: 731 IASSDYEGIISLWDANTGQNIMTLEEHEKRVWSVDFSRTDPTQLASGSDDTRVKLWSTTT 790
Query: 693 GVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYV 752
+I TI++KAN+CCV+F S +AFGSADH I+YYDLR K PL GH K VSYV
Sbjct: 791 ERAITTIESKANICCVKFNPCSSNLIAFGSADHHIHYYDLRQYKDPLLIFKGHRKAVSYV 850
Query: 753 KFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGS 812
KF++ ++SASTD+TLKLW+++ + + +FTGH+N KNFVGL+V Y+ GS
Sbjct: 851 KFMNKDEIISASTDSTLKLWNVNQ------NDCVRTFTGHSNEKNFVGLTVNGDYICCGS 904
Query: 813 ETNEVFVYHKAFPMPALSFNFNHADPLSGPETDD-AAQFISSVCWRGQSSNTLVAANSSG 871
E N V+ Y+K P ++ F A+ +G ETDD +QF+SSVCW+ + SN L+AANS G
Sbjct: 905 ENNGVYTYYKTLSKPIVTHRFG-ANSGTGEETDDDGSQFVSSVCWK-KDSNILLAANSQG 962
Query: 872 NIKILEMV 879
NIKIL +V
Sbjct: 963 NIKILSLV 970
|
|
| TAIR|locus:2059359 COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 840 (300.8 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 176/381 (46%), Positives = 235/381 (61%)
Query: 496 LVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV 555
L + QL+ D SK N++S + +EGYS G + F L + +S+LRV
Sbjct: 310 LQKRRQLA-DQPNSKQ-ENDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRV 358
Query: 556 KADLNQGDXXXXXXXXXXXXFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615
A++ GD FDRD ELFA AGV++ IKVF+ +++NE D+ P+VEM+
Sbjct: 359 IAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMS 418
Query: 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675
+RSKLS + WN + K+ IASS++EG+V VWDV+ Q L E EHE+R WS+DFS +P++
Sbjct: 419 TRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSM 478
Query: 676 LASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS 735
L SGSDD VK+W Q S+ I KAN+CCV++ S +A GSADH I+YYDLRN
Sbjct: 479 LVSGSDDCKVKVWCTRQEASVINIDMKANICCVKYNPGSSNYIAVGSADHHIHYYDLRNI 538
Query: 736 KIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV 795
PL GH K VSYVKF+ L SASTD+TL+LWD+ + P+ +F GHTN
Sbjct: 539 SQPLHVFSGHKKAVSYVKFLSNNELASASTDSTLRLWDVKD------NLPVRTFRGHTNE 592
Query: 796 KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVC 855
KNFVGL+V Y+A GSETNEV+VYHK P S F D + E + + FIS+VC
Sbjct: 593 KNFVGLTVNSEYLACGSETNEVYVYHKEITRPVTSHRFGSPD-MDDAEEEAGSYFISAVC 651
Query: 856 WRGQSSNTLVAANSSGNIKIL 876
W+ S T++ ANS G IK+L
Sbjct: 652 WKSDSP-TMLTANSQGTIKVL 671
|
|
| UNIPROTKB|Q8NHY2 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 778 (278.9 bits), Expect = 6.6e-83, Sum P(3) = 6.6e-83
Identities = 163/356 (45%), Positives = 215/356 (60%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 382 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKV+E D +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 442 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 501
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCV 708
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N S+ +I+ KANVCCV
Sbjct: 502 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV 561
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768
+F S LAFG ADH ++YYDLRN+K P+ GH K VSY KFV +VSASTD+
Sbjct: 562 KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ 621
Query: 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828
LKLW++ L SF GH N KNFVGL+ Y+A GSE N +++Y+K
Sbjct: 622 LKLWNVGKPYC------LRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTL 675
Query: 829 LSFNFNHADPLSGPET--DDAAQFISSVCWRGQ---SSNTLVAANSSGNIKILEMV 879
L+F F+ + + DD +F+S+VCWR SN L+AANS G IK+LE+V
Sbjct: 676 LTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 731
|
|
| ZFIN|ZDB-GENE-070410-134 rfwd2 "ring finger and WD repeat domain 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 778 (278.9 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 165/356 (46%), Positives = 216/356 (60%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R ++ F+E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 345 DSRTVNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 404
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKVFE +I + DIHYPV EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 405 TKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 464
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCV 708
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N S+ +I+ KANVCCV
Sbjct: 465 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV 524
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768
+F S LAFG ADH ++YYDLRN+K P+ GH K VSY KFV+ +VSASTD+
Sbjct: 525 KFSPTSRYHLAFGCADHCVHYYDLRNAKQPIMVFKGHRKAVSYAKFVNGGEIVSASTDSQ 584
Query: 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828
LKLW+++ L SF GH N KNFVGL+ YVA GSE N +++Y K
Sbjct: 585 LKLWNVNKPHC------LRSFKGHINEKNFVGLASNGDYVACGSENNSLYLYCKGLSKTL 638
Query: 829 LSFNFNHADPL--SGPETDDAAQFISSVCWRGQ---SSNTLVAANSSGNIKILEMV 879
L+F F+ + + DD +F+S+VCWR SN L+AANS G IK+LE+V
Sbjct: 639 LTFKFDTVKSVLDKDKKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 694
|
|
| UNIPROTKB|F1MHX1 RFWD2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 771 (276.5 bits), Expect = 1.1e-82, Sum P(3) = 1.1e-82
Identities = 162/356 (45%), Positives = 214/356 (60%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 386 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 445
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 446 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 505
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCV 708
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N S+ +I+ KANVCCV
Sbjct: 506 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV 565
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768
+F S LAFG ADH ++YYDLRN+K P+ GH K VSY KFV +VSASTD+
Sbjct: 566 KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ 625
Query: 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828
LKLW++ L SF GH N KNFVGL+ Y+A GSE N +++Y+K
Sbjct: 626 LKLWNVGKPYC------LRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTL 679
Query: 829 LSFNFNHADPLSGPET--DDAAQFISSVCWRGQ---SSNTLVAANSSGNIKILEMV 879
L+F F+ + + DD +F+S+VCWR SN L+AANS G IK+LE+V
Sbjct: 680 LTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 735
|
|
| MGI|MGI:1347046 Rfwd2 "ring finger and WD repeat domain 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 775 (277.9 bits), Expect = 1.4e-82, Sum P(3) = 1.4e-82
Identities = 163/356 (45%), Positives = 215/356 (60%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 384 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 443
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 444 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 503
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCV 708
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N S+ +I+ KANVCCV
Sbjct: 504 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV 563
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768
+F S LAFG ADH ++YYDLRN+K P+ GH K VSY KFV +VSASTD+
Sbjct: 564 KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ 623
Query: 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828
LKLW++ L SF GH N KNFVGL+ Y+A GSE N +++Y+K
Sbjct: 624 LKLWNVGKPYC------LRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTL 677
Query: 829 LSFNFNHADPLSGPET--DDAAQFISSVCWRGQS---SNTLVAANSSGNIKILEMV 879
L+F F+ + + DD +F+S+VCWR S SN L+AANS G IK+LE+V
Sbjct: 678 LTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALSDGESNVLIAANSQGTIKVLELV 733
|
|
| UNIPROTKB|E2RRJ5 RFWD2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 771 (276.5 bits), Expect = 3.6e-82, Sum P(3) = 3.6e-82
Identities = 162/356 (45%), Positives = 214/356 (60%)
Query: 530 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 588
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 384 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 443
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V +WD
Sbjct: 444 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTVILWDGF 503
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCV 708
Q +EHE+R WS+DF+ DP LLASGSDD VKLWS N S+ +I+ KANVCCV
Sbjct: 504 TGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKLWSTNLDNSVASIEAKANVCCV 563
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768
+F S LAFG ADH ++YYDLRN+K P+ GH K VSY KFV +VSASTD+
Sbjct: 564 KFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRKAVSYAKFVSGEEIVSASTDSQ 623
Query: 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828
LKLW++ L SF GH N KNFVGL+ Y+A GSE N +++Y+K
Sbjct: 624 LKLWNVGKPYC------LRSFKGHINEKNFVGLASNGDYIACGSENNSLYLYYKGLSKTL 677
Query: 829 LSFNFNHADPLSGPET--DDAAQFISSVCWRGQ---SSNTLVAANSSGNIKILEMV 879
L+F F+ + + DD +F+S+VCWR SN L+AANS G IK+LE+V
Sbjct: 678 LTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAANSQGTIKVLELV 733
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LJR3 | SPA3_ARATH | No assigned EC number | 0.6626 | 0.8850 | 0.9207 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XI3877 | hypothetical protein (851 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 879 | |||
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 0.0 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 7e-35 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 2e-28 | |
| cd00200 | 289 | cd00200, WD40, WD40 domain, found in a number of e | 1e-22 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-21 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 4e-19 | |
| COG2319 | 466 | COG2319, COG2319, FOG: WD40 repeat [General functi | 1e-11 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 6e-11 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 2e-09 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 3e-09 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 4e-07 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 1e-06 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 1e-06 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-06 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 3e-06 | |
| pfam00400 | 39 | pfam00400, WD40, WD domain, G-beta repeat | 4e-05 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-04 | |
| smart00320 | 40 | smart00320, WD40, WD40 repeats | 2e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 4e-04 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 0.002 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 0.002 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 0.002 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.003 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 1097 bits (2837), Expect = 0.0
Identities = 542/856 (63%), Positives = 635/856 (74%), Gaps = 99/856 (11%)
Query: 32 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQ 90
L+H D++R+ G + D V A+E DVSLRQWLD P RSVD +EC H+FRQ
Sbjct: 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQ 88
Query: 91 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKD 150
IVEIV AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD E+ ++
Sbjct: 89 IVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD--EDATTKS----RE 142
Query: 151 LSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210
+ S RRE+ IL
Sbjct: 143 IGSS------------RREE-------------------------------------ILS 153
Query: 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFS 270
R + E KKQPFPMKQIL ME +WY SPEE G+ +CASD+YRLGVLLFELFCP S
Sbjct: 154 ERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVS 213
Query: 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330
+ EEK+RTMSSLRHRVLPPQ+LL +PKEASFCLWLLHPEPS RP M ELLQSEF+NEPR+
Sbjct: 214 SREEKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRE 273
Query: 331 SMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAIL 390
++EEREAA+ELR++I+E+ELLLEFL L+QQRKQE+A KLQD +S + SDI++V K+Q +L
Sbjct: 274 NLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVL 333
Query: 391 RKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRP-ELQLHHLEECDDNLD 449
++KG +D + + SRKR R L EE DDN
Sbjct: 334 QQKG-------------------------SDVRSFLASRKRIRQGAETLAAEEENDDN-- 366
Query: 450 DNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVRHSQLSS-D 505
L E +L +SSRLM+N KKLES YF TR R +K + +PL R+ S +
Sbjct: 367 ---SSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSEN 423
Query: 506 GRTSKPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGD 563
GR+S E+SS++N + ++ R+ GWI+PFLEGLCKYLSFSKLRVKADL QGD
Sbjct: 424 GRSS-----EKSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGD 478
Query: 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 623
LLNSSNLVC++ FDRDGE FA AGVNKKIK+FEC++II + RDIHYPVVE+ASRSKLS I
Sbjct: 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGI 538
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
CWNSYIKSQ+ASSNFEGVVQVWDV+RSQ++TEM+EHE+RVWSID+SSADPTLLASGSDDG
Sbjct: 539 CWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 598
Query: 684 SVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI 743
SVKLWSINQGVSIGTIKTKAN+CCVQFP +SGRSLAFGSADH++YYYDLRN K+PLCT+I
Sbjct: 599 SVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI 658
Query: 744 GHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSV 803
GH+KTVSYV+FVD++TLVS+STDNTLKLWDLSM S + +TPLHSF GHTNVKNFVGLSV
Sbjct: 659 GHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSV 718
Query: 804 WDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNT 863
DGY+ATGSETNEVFVYHKAFPMP LS+ F DP+SG E DDA+QFISSVCWRGQSS T
Sbjct: 719 SDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSS-T 777
Query: 864 LVAANSSGNIKILEMV 879
LVAANS+GNIKILEMV
Sbjct: 778 LVAANSTGNIKILEMV 793
|
Length = 793 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 7e-35
Identities = 81/307 (26%), Positives = 134/307 (43%), Gaps = 33/307 (10%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630
V ++F DG+L A + IKV++ + + +++ +Y+
Sbjct: 12 VTCVAFSPDGKLLATGSGDGTIKVWD----LETGELLRTLKGHTGPVRDVAASADGTYL- 66
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690
AS + + +++WD+ + + + H V S+ FS D +L+S S D ++K+W +
Sbjct: 67 ---ASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDV 122
Query: 691 NQGVSIGTIKTKAN-VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTV 749
G + T++ + V V F D G +A S D I +DLR K + TL GH V
Sbjct: 123 ETGKCLTTLRGHTDWVNSVAFSPD-GTFVASSSQDGTIKLWDLRTGK-CVATLTGHTGEV 180
Query: 750 SYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYV 808
+ V F D L+S+S+D T+KLWDLS L + GH N N V S +
Sbjct: 181 NSVAFSPDGEKLLSSSSDGTIKLWDLST------GKCLGTLRGHENGVNSVAFSPDGYLL 234
Query: 809 ATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAAN 868
A+GSE + V+ LSG ++S+ W L + +
Sbjct: 235 ASGSEDGTIRVWDLR--------TGECVQTLSGHTN-----SVTSLAW-SPDGKRLASGS 280
Query: 869 SSGNIKI 875
+ G I+I
Sbjct: 281 ADGTIRI 287
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 2e-28
Identities = 66/227 (29%), Positives = 115/227 (50%), Gaps = 27/227 (11%)
Query: 558 DLNQGDLLNS----SNLVCSLSFDRDGELFAAAGVNKKIKVFE-----CDAIINENRDIH 608
DL G+ + + ++ V S++F DG + +++ +K IKV++ C + + D
Sbjct: 79 DLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTD-- 136
Query: 609 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDF 668
V +S+ ++ + +ASS+ +G +++WD+ + + + H V S+ F
Sbjct: 137 -WV---------NSVAFSPD-GTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAF 185
Query: 669 SSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-VCCVQFPLDSGRSLAFGSADHRI 727
S D L S S DG++KLW ++ G +GT++ N V V F G LA GS D I
Sbjct: 186 S-PDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAF-SPDGYLLASGSEDGTI 243
Query: 728 YYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWD 773
+DLR + + TL GH +V+ + + D L S S D T+++WD
Sbjct: 244 RVWDLR-TGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
Length = 289 |
| >gnl|CDD|238121 cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment | Back alignment and domain information |
|---|
Score = 98.9 bits (247), Expect = 1e-22
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 25/224 (11%)
Query: 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSG 715
+ H V + F S D LLA+GS DG++K+W + G + T+K V V G
Sbjct: 6 KGHTGGVTCVAF-SPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAA-SADG 63
Query: 716 RSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDL 774
LA GS+D I +DL + + TL GH VS V F D L S+S D T+K+WD+
Sbjct: 64 TYLASGSSDKTIRLWDLETGE-CVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDV 122
Query: 775 SMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFN 834
L + GHT+ N V S +VA+ S+ + ++ +
Sbjct: 123 E------TGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLR------TGKCV 170
Query: 835 HADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878
L+G ++SV + L++++S G IK+ ++
Sbjct: 171 AT--LTGHT-----GEVNSVAFSP-DGEKLLSSSSDGTIKLWDL 206
|
Length = 289 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 98.6 bits (244), Expect = 1e-21
Identities = 73/345 (21%), Positives = 129/345 (37%), Gaps = 46/345 (13%)
Query: 514 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCS 573
N+ + + + L L L DL+ L + + S
Sbjct: 11 NKSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSLLLRGHEDSITS 70
Query: 574 LSFDRDGELFAAAGVNKKIKVFECD----------------------------------- 598
++F DGEL + + IK+++ D
Sbjct: 71 IAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASS 130
Query: 599 ------AIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV 652
+ + + ++S+ ++ K + S+ +G +++WD+ +
Sbjct: 131 SLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKP 190
Query: 653 LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPL 712
L+ + H V S+ FS L+ASGS DG+++LW ++ G + + + + V
Sbjct: 191 LSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSVVSSFS 250
Query: 713 DSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKL 771
G LA GS+D I +DLR+S L TL GH+ +V V F D L S S+D T++L
Sbjct: 251 PDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRL 310
Query: 772 WDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNE 816
WDL T GH + + S + +G +
Sbjct: 311 WDLETGKLLSSLT----LKGHEGPVSSLSFSPDGSLLVSGGSDDG 351
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 90.9 bits (224), Expect = 4e-19
Identities = 95/395 (24%), Positives = 168/395 (42%), Gaps = 39/395 (9%)
Query: 445 DDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSS 504
D + + +L G + S+ K + + + A S V+ LS+
Sbjct: 93 DLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLAS---------SSLDGTVKLWDLST 143
Query: 505 DGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDL 564
G+ + L S+ +L +S + L+G K + + L
Sbjct: 144 PGKLIRTLEGHSESVTSLA----FSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLA---- 195
Query: 565 LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 623
++ V SL+F DG L A+ + I++++ + + S S +SS
Sbjct: 196 -GHTDPVSSLAFSPDGGLLIASGSSDGTIRLWD-----LSTGKLLRSTLSGHSDSVVSSF 249
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDD 682
+ + +AS + +G +++WD+ S +L + H V S+ FS D LLASGS D
Sbjct: 250 SPDGSL---LASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSP-DGKLLASGSSD 305
Query: 683 GSVKLWSINQGVSIGTIKTKAN---VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPL 739
G+V+LW + G + ++ K + V + F D ++ GS D I +DLR K
Sbjct: 306 GTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLK 365
Query: 740 CTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV 799
L GH+ +S D + S STD T++LWDLS + L + GHT+ +
Sbjct: 366 T-LEGHSNVLSVSFSPDGRVVSSGSTDGTVRLWDLST------GSLLRNLDGHTSRVTSL 418
Query: 800 GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFN 834
S +A+GS N + ++ + ++SF+ +
Sbjct: 419 DFSPDGKSLASGSSDNTIRLWDLKTSLKSVSFSPD 453
|
Length = 466 |
| >gnl|CDD|225201 COG2319, COG2319, FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Score = 67.4 bits (163), Expect = 1e-11
Identities = 67/287 (23%), Positives = 119/287 (41%), Gaps = 33/287 (11%)
Query: 600 IINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH 659
N+++ + + + S +S + + + +V + D+S +R H
Sbjct: 9 SENKSKLLKKSELGPSLNSLSLLSLGSSESGILLLALLSDSLVSLPDLSSL----LLRGH 64
Query: 660 ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANV-----CCVQFPLDS 714
E + SI FS LL SGS DG++KLW ++ G + + + P +
Sbjct: 65 EDSITSIAFSPDGE-LLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGN 123
Query: 715 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSAST-DNTLKLW 772
LA S D + +DL + TL GH+++V+ + F D L S S+ D T+KLW
Sbjct: 124 SILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLW 183
Query: 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLS-VWDGYVATGSETNEVFVYHKAFPMPALSF 831
DL PL + GHT+ + + S +A+GS + ++ + S
Sbjct: 184 DLR------TGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRST 237
Query: 832 NFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878
H+D +SS G + L + +S G I++ ++
Sbjct: 238 LSGHSD-----------SVVSSFSPDG---SLLASGSSDGTIRLWDL 270
|
Length = 466 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 63.3 bits (155), Expect = 6e-11
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLL 292
Y +PE L G A DI+ LGV+L+EL PF ++ + + P
Sbjct: 161 EYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE 220
Query: 293 LKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
EA LL +P R E LQ F
Sbjct: 221 WDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 58.6 bits (142), Expect = 2e-09
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP---PQL 291
T Y +PE G P S SDI+ LG LL+E+ F+ E R+M LR++V P +
Sbjct: 164 TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM-ATFAPPFE-ARSMQDLRYKVQRGKYPPI 221
Query: 292 LLKFPKEAS-FCLWLLHPEPSGRPKMGELLQS 322
+ ++ F +L +P RP ++L S
Sbjct: 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 58.4 bits (142), Expect = 3e-09
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 235 TNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 290
T WY +PE L G D++ LGV+L+EL PFS E L R+L P
Sbjct: 161 TPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFS--GENILDQLQLIRRILGPP 218
Query: 291 LLLKFPKE-------ASFCLWLLHPEPSGRPKMGELLQSEFL 325
L PK L+ +PS RP E+LQ +
Sbjct: 219 LEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 51.7 bits (125), Expect = 4e-07
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQL 291
Y SPE P + SDI+ LG +L+EL PF + + L ++L P +
Sbjct: 169 YLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPF-----EGENLLELALKILKGQYPPI 223
Query: 292 LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFL 325
++ E + LL +P RP + ++LQS F+
Sbjct: 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 1e-06
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689
++L ++ H V S+ FS D LLASGSDDG+V++W
Sbjct: 2 KLLRTLKGHTGPVTSVAFSP-DGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 1e-06
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 27/150 (18%)
Query: 180 DLSEASCMQSSSAYGTHVVLVE--GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237
DL+ +C+ SS T VV V GM + +LD+ E FP+K
Sbjct: 125 DLAARNCLVSS----TGVVKVSDFGMTRY-VLDD----EYTSSSGAKFPVK--------- 166
Query: 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PF-STGEEKTRTMSSLRHRVLPPQLL 292
++ PE + S SD++ GVL++E+F PF + M S R+ P+L
Sbjct: 167 WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLA 226
Query: 293 LKFPKEASFCLWLLHPEPSGRPKMGELLQS 322
E + W H +P GRP ELL++
Sbjct: 227 SMTVYEVMYSCW--HEKPEGRPTFAELLRA 254
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 3e-06
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 238 YASPEELAGAPVSCASDIYRLGVLLFELF---CPFSTGEEKTRTMSSLRHRVLPPQLLLK 294
Y SPE + G S A+DI+ LG+ L E PF + + ++ P L
Sbjct: 166 YMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS-FFELMQAICDGPPPSLP 224
Query: 295 FPKEAS--FCLWL---LHPEPSGRPKMGELLQSEFLNE 327
+E S F ++ L +P RP ELLQ F+ +
Sbjct: 225 -AEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-06
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689
++L ++ H V S+ FS D LASGSDDG++KLW
Sbjct: 3 ELLKTLKGHTGPVTSVAFSP-DGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|201208 pfam00400, WD40, WD domain, G-beta repeat | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 4e-05
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 738 PLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWD 773
L TL GH V+ V F D L S S D T+++WD
Sbjct: 3 LLRTLKGHTGPVTSVAFSPDGNLLASGSDDGTVRVWD 39
|
Length = 39 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 1e-04
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 203 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262
++E +LD V+ + P K ++ T Y +PE L G P S ++DIY LGV+L
Sbjct: 165 LEEEDLLDIDVDERNICYSSMTIPGK---IVGTPDYMAPERLLGVPASESTDIYALGVIL 221
Query: 263 FE-LFCPFSTGEEKTRTMSSLRHRVLPPQ 290
++ L F +K R + S R +L P
Sbjct: 222 YQMLTLSFPYRRKKGRKI-SYRDVILSPI 249
|
Length = 932 |
| >gnl|CDD|197651 smart00320, WD40, WD40 repeats | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 2e-04
Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 735 SKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWD 773
S L TL GH V+ V F D L S S D T+KLWD
Sbjct: 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. Length = 40 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 4e-04
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 15/100 (15%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP 289
T Y SPE L P +SD++ LG +++++ PF E T + PP
Sbjct: 185 TAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQKILKLEYSFPP 243
Query: 290 QLLLKFPKEAS-FCLWLLHPEPSGRP----KMGELLQSEF 324
FP +A LL +P R EL F
Sbjct: 244 ----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 227 MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF----CPFST-GEEKTRTMSS 281
+KQI + W A PE L + SD++ G+LL+E F P+ ++TR
Sbjct: 154 LKQIPI---KWTA-PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE 209
Query: 282 LRHRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQS 322
+R+ PQL E + L L +P RP E+
Sbjct: 210 SGYRMPAPQLC----PEEIYRLMLQCWAYDPENRPSFSEIYNE 248
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS---SLRHRVLP 288
T +Y +PE P S +D++ LGVLL+EL PF GE M + R+ LP
Sbjct: 208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD-GENMEEVMHKTLAGRYDPLP 266
Query: 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320
P + P+ LL +P RP +LL
Sbjct: 267 PSI---SPEMQEIVTALLSSDPKRRPSSSKLL 295
|
Length = 496 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 41.3 bits (95), Expect = 0.002
Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 17/117 (14%)
Query: 235 TNWYASPEELAG---APVSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSLRHRV 286
T Y +PE L G A S +SDI+ LG+ L+EL T + +
Sbjct: 171 TPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL 230
Query: 287 LPPQLLLKFPKE---------ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 334
P L + LL +P R L + L + +
Sbjct: 231 PTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESD 287
|
Length = 384 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.003
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFEL----FCPFSTGEEKTRTMSSLRHRVL--- 287
T+ Y +PE + G S SDI+ LG+ L EL F P+ + + L ++
Sbjct: 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF-PYPPENDPPDGIFELLQYIVNEP 220
Query: 288 PPQLLL-KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 326
PP+L KF + F L +P RP ELL+ F+
Sbjct: 221 PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 879 | |||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 100.0 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 100.0 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 100.0 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 100.0 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 100.0 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 100.0 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 100.0 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 100.0 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 100.0 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 100.0 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 100.0 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 100.0 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 100.0 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 99.98 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.98 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.98 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 99.98 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 99.98 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 99.98 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 99.97 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 99.97 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.97 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 99.97 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 99.97 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.97 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 99.97 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 99.97 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.97 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.97 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.97 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.97 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.97 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.97 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 99.97 | |
| KOG0281 | 499 | consensus Beta-TrCP (transducin repeats containing | 99.97 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 99.97 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.97 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.97 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.97 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.97 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.97 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 99.97 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.97 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.97 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.97 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.97 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.97 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.97 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.97 | |
| KOG1446 | 311 | consensus Histone H3 (Lys4) methyltransferase comp | 99.97 | |
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.96 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.96 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.96 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.96 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.96 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.96 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.96 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.96 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.96 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.96 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 99.96 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.96 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.96 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.96 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.96 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.96 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.96 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.96 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.96 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.96 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.96 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.96 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.96 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.96 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.96 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.96 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.96 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.96 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.96 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.96 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.96 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.96 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.96 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.96 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.96 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.96 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.96 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.96 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.96 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.96 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.96 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.96 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.96 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| KOG0269 | 839 | consensus WD40 repeat-containing protein [Function | 99.96 | |
| KOG0296 | 399 | consensus Angio-associated migratory cell protein | 99.96 | |
| KOG0268 | 433 | consensus Sof1-like rRNA processing protein (conta | 99.96 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.95 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.95 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.95 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.95 | |
| PTZ00421 | 493 | coronin; Provisional | 99.95 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.95 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.95 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.95 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.95 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0301 | 745 | consensus Phospholipase A2-activating protein (con | 99.95 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.95 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.95 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.95 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.95 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.95 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.95 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.95 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.95 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.95 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.95 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.95 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.95 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.95 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.95 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.95 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.95 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.95 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.95 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.95 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.95 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.95 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.95 | |
| KOG0274 | 537 | consensus Cdc4 and related F-box and WD-40 protein | 99.95 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.95 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.95 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.95 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.95 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.95 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0299 | 479 | consensus U3 snoRNP-associated protein (contains W | 99.95 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.95 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.95 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.95 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.95 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.95 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.95 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.95 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.95 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.95 | |
| PTZ00421 | 493 | coronin; Provisional | 99.95 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.95 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.95 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.95 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.95 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.95 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.95 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.95 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.95 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.95 | |
| PTZ00420 | 568 | coronin; Provisional | 99.95 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.95 | |
| KOG2096 | 420 | consensus WD40 repeat protein [General function pr | 99.95 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.95 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.95 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.95 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.95 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.95 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.95 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.95 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.95 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.95 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.95 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.95 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.94 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.94 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.94 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.94 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.94 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.94 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.94 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.94 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.94 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.94 | |
| PTZ00420 | 568 | coronin; Provisional | 99.94 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.94 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.94 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.94 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.94 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.94 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.94 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.94 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.94 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.94 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.94 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.94 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.94 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.94 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.94 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.94 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.94 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.94 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.94 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.94 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.94 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.94 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG1036 | 323 | consensus Mitotic spindle checkpoint protein BUB3, | 99.94 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.94 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.94 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.94 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.94 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.94 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.94 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.94 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.94 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.94 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.94 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.94 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.94 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.94 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.94 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.94 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.94 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.94 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.94 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.94 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.94 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.94 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.94 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.94 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.94 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.94 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.94 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.94 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG0294 | 362 | consensus WD40 repeat-containing protein [Function | 99.94 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.94 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.94 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.94 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.94 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.94 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.94 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.94 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.94 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.94 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.94 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.94 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.94 | |
| KOG0306 | 888 | consensus WD40-repeat-containing subunit of the 18 | 99.94 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.93 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.93 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.93 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.93 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.93 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.93 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.93 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.93 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.93 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.93 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.93 | |
| KOG0270 | 463 | consensus WD40 repeat-containing protein [Function | 99.93 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.93 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.93 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.93 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.93 | |
| KOG0641 | 350 | consensus WD40 repeat protein [General function pr | 99.93 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.93 | |
| KOG0300 | 481 | consensus WD40 repeat-containing protein [Function | 99.93 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.93 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.93 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.93 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.93 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.93 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.93 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.93 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.93 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.93 | |
| KOG2055 | 514 | consensus WD40 repeat protein [General function pr | 99.93 | |
| KOG0639 | 705 | consensus Transducin-like enhancer of split protei | 99.93 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.93 | |
| KOG1539 | 910 | consensus WD repeat protein [General function pred | 99.93 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.93 | |
| KOG4283 | 397 | consensus Transcription-coupled repair protein CSA | 99.93 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.93 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.93 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.93 | |
| KOG1408 | 1080 | consensus WD40 repeat protein [Function unknown] | 99.92 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.92 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.92 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.92 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.92 | |
| KOG1332 | 299 | consensus Vesicle coat complex COPII, subunit SEC1 | 99.92 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.92 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.92 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.92 | |
| KOG0288 | 459 | consensus WD40 repeat protein TipD [General functi | 99.92 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.92 | |
| KOG0289 | 506 | consensus mRNA splicing factor [General function p | 99.92 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.92 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.92 | |
| KOG0321 | 720 | consensus WD40 repeat-containing protein L2DTL [Fu | 99.92 | |
| KOG0308 | 735 | consensus Conserved WD40 repeat-containing protein | 99.92 | |
| KOG1332 | 299 | consensus Vesicle coat complex COPII, subunit SEC1 | 99.92 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.92 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.92 | |
| KOG0294 | 362 | consensus WD40 repeat-containing protein [Function | 99.91 |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-90 Score=847.67 Aligned_cols=735 Identities=72% Similarity=1.145 Sum_probs=572.3
Q ss_pred CceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCC
Q 002801 55 DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134 (879)
Q Consensus 55 ~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~ 134 (879)
..++.|.++.+++|++||+...+.+++.+++.|++||++||+|||++|||||||||+||||+..|.+|++|||++...+.
T Consensus 53 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 53 DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred chhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 34444444558899999977667799999999999999999999999999999999999999999999999999976432
Q ss_pred CCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccc
Q 002801 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 214 (879)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 214 (879)
+. ....+..|||+++.... ..... .
T Consensus 133 ~~--------------------------~~~~ki~DfG~a~~~~~-~~~~~----------------------------~ 157 (793)
T PLN00181 133 DE--------------------------DATTKSREIGSSRREEI-LSERR----------------------------I 157 (793)
T ss_pred cc--------------------------cCccccccccccccccc-ccccc----------------------------h
Confidence 20 11244556665544100 00000 0
Q ss_pred hhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhcCCCCChhhHhHHhhhcccCCCchhhcc
Q 002801 215 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLK 294 (879)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (879)
.........+++......+||++|||||++.+..|+.++|||||||+||||++|+.+.......+..+.....++.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (793)
T PLN00181 158 EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLN 237 (793)
T ss_pred hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcChhhhhc
Confidence 00001112233444456789999999999999999999999999999999999665554444455555555556555555
Q ss_pred ChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 002801 295 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVS 374 (879)
Q Consensus 295 ~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~e~~~~~~~~~~~~~~e~l~~~l~~~~q~kqe~~~~l~~~l~ 374 (879)
.+....++.+||+++|.+||++.|+++||||........+++......+...+.+.+.+++...++++++++.+++.+++
T Consensus 238 ~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 317 (793)
T PLN00181 238 WPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTIS 317 (793)
T ss_pred CHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999999999999999999999999998866555555555555666666677788888888889999999999999
Q ss_pred hhcccHHHHHHHHHHHHhcCCCCcccccccccCCCCCCCCcccccCCCCccccccccccCcccccccccccccccccccC
Q 002801 375 FICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKH 454 (879)
Q Consensus 375 ~l~~Di~eVe~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (879)
.++.||++|++++.+....... .......+++++.+..+...+.... ....
T Consensus 318 ~l~~~i~~~~~r~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 368 (793)
T PLN00181 318 LLSSDIDQVVKRQLVLQQKGSD-------------------------VRSFLASRKRIRQGAETLAAEEEND----DNSS 368 (793)
T ss_pred HHHHHHHHHHhhhhhhcccccc-------------------------cccccccchhhhccccchhhccccc----cccc
Confidence 9999999999866543222111 0122223444443333222221100 0000
Q ss_pred cCCCCcccchhhhhHHHHhHhHHHHHHHhhccccCC---CCCCCcccccccC-CCCCCCCCccccccccccCCCccc-cc
Q 002801 455 NLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVK---PSGRPLVRHSQLS-SDGRTSKPLVNERSSINNLGSKEG-YS 529 (879)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~ 529 (879)
.....+.+.+++++|||++|++|+++||.+|++... ...+++.|..+.- .+++.. +..+.+++..... |.
T Consensus 369 ~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 443 (793)
T PLN00181 369 KLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRSS-----EKSSMSNPAKPPDFYI 443 (793)
T ss_pred cccccccccchhhhHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc-----cccccccccccccccc
Confidence 012235677888999999999999999999986532 2344555544322 344432 3344444443332 32
Q ss_pred cC-CCCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccc
Q 002801 530 EG-RRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIH 608 (879)
Q Consensus 530 ~~-~~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~ 608 (879)
.. ...+++.+|.+|++++|++.+.++...++.+++.+|.+.|++++|+|+|++|||||.|++|+||++..........+
T Consensus 444 ~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~ 523 (793)
T PLN00181 444 NDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIH 523 (793)
T ss_pred cccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccc
Confidence 22 23455778999999999999999999999899999999999999999999999999999999999876433344455
Q ss_pred cceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 002801 609 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 609 ~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw 688 (879)
.++..+.+...|.+++|++..+.+|++++.||+|++||+.+++.+..+.+|.+.|++++|+|.++.+|++|+.|++|++|
T Consensus 524 ~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iW 603 (793)
T PLN00181 524 YPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLW 603 (793)
T ss_pred cceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEE
Confidence 66777777889999999988789999999999999999999999999999999999999997678999999999999999
Q ss_pred eCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCc
Q 002801 689 SINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768 (879)
Q Consensus 689 d~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~ 768 (879)
|++++..+.++..+..|+++.|++.++.+|++|+.|+.|++||+++.+.++..+.+|...|+++.|.++.+|+|++.|++
T Consensus 604 d~~~~~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ 683 (793)
T PLN00181 604 SINQGVSIGTIKTKANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNT 683 (793)
T ss_pred ECCCCcEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCE
Confidence 99999999999888899999998766899999999999999999987766788889999999999998999999999999
Q ss_pred EEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCC
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAA 848 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 848 (879)
|++||++.........++.++.+|.+.+++++|+|++.+||+|+.|+.|++|+...+.++.++.+...+.+.+....+|.
T Consensus 684 ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 763 (793)
T PLN00181 684 LKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDAS 763 (793)
T ss_pred EEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCC
Confidence 99999986432222367889999999999999999999999999999999999998888888888777666665556778
Q ss_pred CCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 849 QFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 849 ~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
.+|++++|+|++. +|++|+.||.|+||+||
T Consensus 764 ~~V~~v~ws~~~~-~lva~~~dG~I~i~~~~ 793 (793)
T PLN00181 764 QFISSVCWRGQSS-TLVAANSTGNIKILEMV 793 (793)
T ss_pred cEEEEEEEcCCCC-eEEEecCCCcEEEEecC
Confidence 8999999999999 99999999999999997
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-46 Score=376.24 Aligned_cols=311 Identities=21% Similarity=0.327 Sum_probs=276.2
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..+++|+.|.++++||..+..+..+. .+|.+.|.||+|+|||+.||+|+.||.|++||-.++.......
T Consensus 128 ~~l~tGsGD~TvR~WD~~TeTp~~t~-----KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l------ 196 (480)
T KOG0271|consen 128 SRLVTGSGDTTVRLWDLDTETPLFTC-----KGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRAL------ 196 (480)
T ss_pred ceEEecCCCceEEeeccCCCCcceee-----cCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccc------
Confidence 34489999999999999987766554 4999999999999999999999999999999987754443322
Q ss_pred eccCCCeeEEEEeCC----CCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 002801 614 MASRSKLSSICWNSY----IKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~----~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd 689 (879)
.+|...|++++|.|. ....||+++.||.|+|||+..++++..+.+|+.+|+||+|-- ..++++||.|++|++|+
T Consensus 197 ~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG--~gliySgS~DrtIkvw~ 274 (480)
T KOG0271|consen 197 RGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGG--EGLIYSGSQDRTIKVWR 274 (480)
T ss_pred cCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcC--CceEEecCCCceEEEEE
Confidence 358999999999773 356899999999999999999999999999999999999973 56999999999999999
Q ss_pred CCCCceEEEEecCC-ceEEEEee-----------CC------------------------CCCEEEEEeCCCeEEEEEcC
Q 002801 690 INQGVSIGTIKTKA-NVCCVQFP-----------LD------------------------SGRSLAFGSADHRIYYYDLR 733 (879)
Q Consensus 690 ~~~~~~i~~~~~~~-~v~~v~~~-----------p~------------------------~~~~l~tgs~d~~I~iwDl~ 733 (879)
...|..+..++.|+ .|+.++.+ |. ++..+++|+.|.++.+|+..
T Consensus 275 a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~ 354 (480)
T KOG0271|consen 275 ALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPF 354 (480)
T ss_pred ccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccc
Confidence 99999999888654 48888766 32 22359999999999999999
Q ss_pred CCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEe
Q 002801 734 NSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGS 812 (879)
Q Consensus 734 ~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs 812 (879)
..++|+..+.+|..-|+.+.|+ |+.++||+|-|+.|++||.+++ +-+.+|.||...|+.|+|+.|.+.|++||
T Consensus 355 ~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tG------k~lasfRGHv~~VYqvawsaDsRLlVS~S 428 (480)
T KOG0271|consen 355 KSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTG------KFLASFRGHVAAVYQVAWSADSRLLVSGS 428 (480)
T ss_pred ccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCc------chhhhhhhccceeEEEEeccCccEEEEcC
Confidence 8888899999999999999999 9999999999999999999998 77899999999999999999999999999
Q ss_pred CCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 813 ETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 813 ~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
.|.++++|++++.+.... +.+|...|.+|.|+|||. .+++++.|..+++|.
T Consensus 429 kDsTLKvw~V~tkKl~~D-------------LpGh~DEVf~vDwspDG~-rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 429 KDSTLKVWDVRTKKLKQD-------------LPGHADEVFAVDWSPDGQ-RVASGGKDKVLRLWR 479 (480)
T ss_pred CCceEEEEEeeeeeeccc-------------CCCCCceEEEEEecCCCc-eeecCCCceEEEeec
Confidence 999999999998765432 357888999999999999 999999999999995
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-42 Score=350.83 Aligned_cols=308 Identities=23% Similarity=0.376 Sum_probs=264.7
Q ss_pred ccCceEEEeecC-cEEEEEec-cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCC
Q 002801 541 LEGLCKYLSFSK-LRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 618 (879)
Q Consensus 541 ~d~~i~~w~~~~-~~~~~~l~-~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 618 (879)
.+.+..++..+. +++.+-.+ ...+.||..+|.|+.|+|+|..||||+.|.++++||+.+..+ .....+|..
T Consensus 86 e~~l~lvyqpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp-------~~t~KgH~~ 158 (480)
T KOG0271|consen 86 EDVLTLVYQPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETP-------LFTCKGHKN 158 (480)
T ss_pred hheeeEEeccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCc-------ceeecCCcc
Confidence 344555554333 44433332 356779999999999999999999999999999999987322 123346889
Q ss_pred CeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEE-EEeccCCCcEEEEEEecC----CCCEEEEEeCCCcEEEEeCCCC
Q 002801 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL-TEMREHERRVWSIDFSSA----DPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 619 ~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~-~~~~~h~~~v~sv~~sp~----~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
.|.|++|+| ++..||+|+.||+|++||..+++++ ..+.+|.+.|++++|.|. ...+||++|.||+|+|||+..+
T Consensus 159 WVlcvawsP-Dgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~ 237 (480)
T KOG0271|consen 159 WVLCVAWSP-DGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLG 237 (480)
T ss_pred EEEEEEECC-CcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCc
Confidence 999999999 4999999999999999999988764 668999999999999863 4569999999999999999999
Q ss_pred ceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-C-----------C---
Q 002801 694 VSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-D-----------A--- 757 (879)
Q Consensus 694 ~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~-----------~--- 757 (879)
.++..+.. ...|+||+|--+ .+|++||.|++|++|+...+.. ...++||...|+.++.+ + +
T Consensus 238 ~~~~~lsgHT~~VTCvrwGG~--gliySgS~DrtIkvw~a~dG~~-~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~ 314 (480)
T KOG0271|consen 238 TCVRTLSGHTASVTCVRWGGE--GLIYSGSQDRTIKVWRALDGKL-CRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKP 314 (480)
T ss_pred eEEEEeccCccceEEEEEcCC--ceEEecCCCceEEEEEccchhH-HHhhcccchheeeeeccchhhhhccccccccccC
Confidence 99988875 567999999754 6999999999999999998874 78899999999988775 1 2
Q ss_pred ----------------------CEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCC
Q 002801 758 ----------------------TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETN 815 (879)
Q Consensus 758 ----------------------~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg 815 (879)
+.|+|||.|.++.+|+-... .+++..+.||...|+.|.||||++|||++|-|.
T Consensus 315 ~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~-----kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDk 389 (480)
T KOG0271|consen 315 KSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKS-----KKPITRMTGHQALVNHVSFSPDGRYIASASFDK 389 (480)
T ss_pred CChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEeccccc-----ccchhhhhchhhheeeEEECCCccEEEEeeccc
Confidence 24999999999999997765 368899999999999999999999999999999
Q ss_pred cEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 816 EVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 816 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
+|++|+-.+++-+.+++ +|-+.|..|+|+.|++ +|++|+.|.++|||++
T Consensus 390 SVkLW~g~tGk~lasfR-------------GHv~~VYqvawsaDsR-LlVS~SkDsTLKvw~V 438 (480)
T KOG0271|consen 390 SVKLWDGRTGKFLASFR-------------GHVAAVYQVAWSADSR-LLVSGSKDSTLKVWDV 438 (480)
T ss_pred ceeeeeCCCcchhhhhh-------------hccceeEEEEeccCcc-EEEEcCCCceEEEEEe
Confidence 99999999998887764 7889999999999999 9999999999999986
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-42 Score=355.47 Aligned_cols=282 Identities=23% Similarity=0.339 Sum_probs=259.3
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCC-CCCeEEEeeCCCcEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIASSNFEGVVQV 644 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~l~s~~~dg~V~v 644 (879)
+-..+|..+.|++|+..||||+.+|.++||+.... + ......+|.+.|.++.|+|. +...+|||+.||+|++
T Consensus 173 gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~-~------~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvkl 245 (459)
T KOG0272|consen 173 GDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQC-N------LLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKL 245 (459)
T ss_pred cCCCcceeeEeecCCCeEEEeecCCceeEeecCCc-c------eeEEEeccccceeeEEEccCCCccceeeeccCCceee
Confidence 56789999999999999999999999999998864 1 12344679999999999997 3679999999999999
Q ss_pred EEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeC
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 645 wd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~ 723 (879)
|++++..++..+.+|..+|..|+|+| +|.+|+|+|.|.+-++||+++++.+.....| ..|.+++|+|+ |.++++|+.
T Consensus 246 w~~~~e~~l~~l~gH~~RVs~VafHP-sG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~D-GSL~~tGGl 323 (459)
T KOG0272|consen 246 WKLSQETPLQDLEGHLARVSRVAFHP-SGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPD-GSLAATGGL 323 (459)
T ss_pred eccCCCcchhhhhcchhhheeeeecC-CCceeeecccccchhhcccccchhhHhhcccccccceeEecCC-CceeeccCc
Confidence 99999999999999999999999999 9999999999999999999999877666654 56999999999 899999999
Q ss_pred CCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEe
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802 (879)
Q Consensus 724 d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 802 (879)
|..-+|||+|++++ ++.+.+|.+.|.+|.|+ +|..|+|||.|++++|||++.. .++.++.+|.+.|+.|.|+
T Consensus 324 D~~~RvWDlRtgr~-im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r------~~ly~ipAH~nlVS~Vk~~ 396 (459)
T KOG0272|consen 324 DSLGRVWDLRTGRC-IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR------SELYTIPAHSNLVSQVKYS 396 (459)
T ss_pred cchhheeecccCcE-EEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccc------ccceecccccchhhheEec
Confidence 99999999999995 99999999999999999 9999999999999999999986 6799999999999999999
Q ss_pred c-CCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 803 V-WDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 803 p-~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
| .|.+|+|+|.|++++||.-.+..++.++ .+|.+.|.++..++++. .++|++.|.+||+|.
T Consensus 397 p~~g~fL~TasyD~t~kiWs~~~~~~~ksL-------------aGHe~kV~s~Dis~d~~-~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 397 PQEGYFLVTASYDNTVKIWSTRTWSPLKSL-------------AGHEGKVISLDISPDSQ-AIATSSFDRTIKLWR 458 (459)
T ss_pred ccCCeEEEEcccCcceeeecCCCcccchhh-------------cCCccceEEEEeccCCc-eEEEeccCceeeecc
Confidence 9 5779999999999999998887777655 47889999999999999 999999999999995
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-40 Score=340.66 Aligned_cols=262 Identities=25% Similarity=0.378 Sum_probs=241.4
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCC--CCEEEEEeCCCcEEEEecCcccCcCcccccceEE-
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE- 613 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspd--g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~- 613 (879)
++++.+|.+|+|+..+......+ .||...|.++.|+|. +..+|||+.||++++|+++... ++..
T Consensus 191 aT~swsG~~kvW~~~~~~~~~~l-----~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~--------~l~~l 257 (459)
T KOG0272|consen 191 ATGSWSGLVKVWSVPQCNLLQTL-----RGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET--------PLQDL 257 (459)
T ss_pred EEeecCCceeEeecCCcceeEEE-----eccccceeeEEEccCCCccceeeeccCCceeeeccCCCc--------chhhh
Confidence 89999999999999987665554 599999999999996 6689999999999999998631 1111
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
-+|...|..++|+|+ |.+|+|+++|.+-++||+++++.+....+|.+.|.+++|+| ||.+++||+.|..-+|||++++
T Consensus 258 ~gH~~RVs~VafHPs-G~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~-DGSL~~tGGlD~~~RvWDlRtg 335 (459)
T KOG0272|consen 258 EGHLARVSRVAFHPS-GKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQP-DGSLAATGGLDSLGRVWDLRTG 335 (459)
T ss_pred hcchhhheeeeecCC-CceeeecccccchhhcccccchhhHhhcccccccceeEecC-CCceeeccCccchhheeecccC
Confidence 247789999999996 99999999999999999999998888899999999999999 9999999999999999999999
Q ss_pred ceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEE
Q 002801 694 VSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLK 770 (879)
Q Consensus 694 ~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~ 770 (879)
.++..+..| .+|.+|.|+|+ |..|||||.|++++|||+|..+. +.++.+|..-|+.|+|+ .|.+|+|+|.|++++
T Consensus 336 r~im~L~gH~k~I~~V~fsPN-Gy~lATgs~Dnt~kVWDLR~r~~-ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~k 413 (459)
T KOG0272|consen 336 RCIMFLAGHIKEILSVAFSPN-GYHLATGSSDNTCKVWDLRMRSE-LYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVK 413 (459)
T ss_pred cEEEEecccccceeeEeECCC-ceEEeecCCCCcEEEeeeccccc-ceecccccchhhheEecccCCeEEEEcccCccee
Confidence 999999865 56999999999 99999999999999999998885 99999999999999998 789999999999999
Q ss_pred EEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 771 LWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 771 lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
||...+. .+++++.||.+.|.+++.++++.+|+|+|.|+++++|.
T Consensus 414 iWs~~~~------~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 414 IWSTRTW------SPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred eecCCCc------ccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999987 88999999999999999999999999999999999995
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=351.58 Aligned_cols=210 Identities=20% Similarity=0.202 Sum_probs=170.7
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
++...+...+||++|..++ +.+. ....||||||++||+|.+.+-.. +.+.+..++.+|+|++.||.|||++||+||
T Consensus 225 ~EieILkkL~HP~IV~~~d-~f~~--~ds~YmVlE~v~GGeLfd~vv~n-k~l~ed~~K~~f~Qll~avkYLH~~GI~HR 300 (475)
T KOG0615|consen 225 NEIEILKKLSHPNIVRIKD-FFEV--PDSSYMVLEYVEGGELFDKVVAN-KYLREDLGKLLFKQLLTAVKYLHSQGIIHR 300 (475)
T ss_pred HHHHHHHhcCCCCEEEEee-eeec--CCceEEEEEEecCccHHHHHHhc-cccccchhHHHHHHHHHHHHHHHHcCcccc
Confidence 4444566778888887777 4432 33469999999999999999554 578999999999999999999999999999
Q ss_pred cCCCcceeeccC---CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 107 NVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 107 DlKP~NIll~~~---~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
||||+|||++.+ -.+||+|||+|+..+...
T Consensus 301 DiKPeNILl~~~~e~~llKItDFGlAK~~g~~s----------------------------------------------- 333 (475)
T KOG0615|consen 301 DIKPENILLSNDAEDCLLKITDFGLAKVSGEGS----------------------------------------------- 333 (475)
T ss_pred cCCcceEEeccCCcceEEEecccchhhccccce-----------------------------------------------
Confidence 999999999766 679999999998864221
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC---CCccCcchhHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGV 260 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGv 260 (879)
.+..+||||.|.|||++.+.. +..++|||||||
T Consensus 334 --------------------------------------------fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGc 369 (475)
T KOG0615|consen 334 --------------------------------------------FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGC 369 (475)
T ss_pred --------------------------------------------ehhhhcCCccccChhheecCCeecccchheeeeccc
Confidence 124579999999999998765 344889999999
Q ss_pred HHHHhhc---CCCCChhhHhHHhhhcc---cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 261 LLFELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 261 il~ell~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
+||-+|+ ||............+.. ...|+.|...+.++.+||.+||..||++|||++|+|+||||+..+..
T Consensus 370 vLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 370 VLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPCL 446 (475)
T ss_pred eEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccccc
Confidence 9999999 77655444423333333 34578888999999999999999999999999999999999975543
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-40 Score=342.58 Aligned_cols=209 Identities=21% Similarity=0.211 Sum_probs=176.5
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVV 105 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givH 105 (879)
+++..+..-+++.+|++|+ +++++.. ..+|+||||+||||..+++.. +.+++...-.|+++|++||.|||. ++|||
T Consensus 126 rEl~il~~~~spyIV~~yg-aF~~~~~-~isI~mEYMDgGSLd~~~k~~-g~i~E~~L~~ia~~VL~GL~YLh~~~~IIH 202 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYG-AFYSNGE-EISICMEYMDGGSLDDILKRV-GRIPEPVLGKIARAVLRGLSYLHEERKIIH 202 (364)
T ss_pred HHHHHHhhCCCCCeeeEeE-EEEeCCc-eEEeehhhcCCCCHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhccCeee
Confidence 4555555669999999888 6655544 689999999999999999765 679999999999999999999995 89999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+|||++..|+|||||||.++.+...
T Consensus 203 RDIKPsNlLvNskGeVKicDFGVS~~lvnS-------------------------------------------------- 232 (364)
T KOG0581|consen 203 RDIKPSNLLVNSKGEVKICDFGVSGILVNS-------------------------------------------------- 232 (364)
T ss_pred ccCCHHHeeeccCCCEEeccccccHHhhhh--------------------------------------------------
Confidence 999999999999999999999999764211
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
-..+++||..|||||.+.+..|+.++||||||+.++||
T Consensus 233 ------------------------------------------~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~ 270 (364)
T KOG0581|consen 233 ------------------------------------------IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLEL 270 (364)
T ss_pred ------------------------------------------hcccccccccccChhhhcCCcCCcccceecccHHHHHH
Confidence 01346999999999999999999999999999999999
Q ss_pred hc---CCCCC----hhhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 266 FC---PFSTG----EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 266 l~---pf~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
+. ||... ......+..+.....|..+.. .++++++|+..||++||.+||++.|+++|||+.....
T Consensus 271 a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 271 AIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred hhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 99 77553 344556666666666655555 8899999999999999999999999999999986543
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=294.14 Aligned_cols=299 Identities=21% Similarity=0.320 Sum_probs=250.7
Q ss_pred cccccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCC
Q 002801 561 QGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 639 (879)
Q Consensus 561 ~~~l~~h~~~V~~l~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~d 639 (879)
.+.+.+|.+.|+.++..+. .+.+.+++.|++|-+|++..... .........-+|...|+.+..++ ++++.++++.|
T Consensus 8 ~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~--~~G~~~r~~~GHsH~v~dv~~s~-dg~~alS~swD 84 (315)
T KOG0279|consen 8 RGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDI--KYGVPVRRLTGHSHFVSDVVLSS-DGNFALSASWD 84 (315)
T ss_pred eeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcc--ccCceeeeeeccceEecceEEcc-CCceEEecccc
Confidence 4667799999999999985 67899999999999999987411 11111223345888999999998 59999999999
Q ss_pred CcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec---CCceEEEEeeCCC-C
Q 002801 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT---KANVCCVQFPLDS-G 715 (879)
Q Consensus 640 g~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~---~~~v~~v~~~p~~-~ 715 (879)
+++++||+.+++..+.|.+|...|.+++|++ +..+++|||.|.+|++|++... +..++.. ...|.||.|+|.. .
T Consensus 85 ~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~-dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~ 162 (315)
T KOG0279|consen 85 GTLRLWDLATGESTRRFVGHTKDVLSVAFST-DNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESN 162 (315)
T ss_pred ceEEEEEecCCcEEEEEEecCCceEEEEecC-CCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCC
Confidence 9999999999999999999999999999999 9999999999999999999854 4444443 4559999999985 5
Q ss_pred CEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC
Q 002801 716 RSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 794 (879)
Q Consensus 716 ~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~ 794 (879)
.+|++++.|++|++||+++.+. ...+.||.+.++.+.++ ||.++++|+.||++.+||++.+ +.+.++ +|..
T Consensus 163 p~Ivs~s~DktvKvWnl~~~~l-~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~------k~lysl-~a~~ 234 (315)
T KOG0279|consen 163 PIIVSASWDKTVKVWNLRNCQL-RTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEG------KNLYSL-EAFD 234 (315)
T ss_pred cEEEEccCCceEEEEccCCcch-hhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCC------ceeEec-cCCC
Confidence 6899999999999999999885 77888999999999999 9999999999999999999987 566665 4788
Q ss_pred cEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEE
Q 002801 795 VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 874 (879)
Q Consensus 795 ~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~ 874 (879)
.|++++|+|+.-. .|...+..|+|||+.++..+..++.....+ ......-...+++|+++|. +|.++-.|+.|+
T Consensus 235 ~v~sl~fspnryw-L~~at~~sIkIwdl~~~~~v~~l~~d~~g~----s~~~~~~~clslaws~dG~-tLf~g~td~~ir 308 (315)
T KOG0279|consen 235 IVNSLCFSPNRYW-LCAATATSIKIWDLESKAVVEELKLDGIGP----SSKAGDPICLSLAWSADGQ-TLFAGYTDNVIR 308 (315)
T ss_pred eEeeEEecCCcee-EeeccCCceEEEeccchhhhhhcccccccc----ccccCCcEEEEEEEcCCCc-EEEeeecCCcEE
Confidence 9999999996554 455556669999999999888877543332 1122234577899999999 999999999999
Q ss_pred EEEe
Q 002801 875 ILEM 878 (879)
Q Consensus 875 vw~l 878 (879)
+|++
T Consensus 309 v~qv 312 (315)
T KOG0279|consen 309 VWQV 312 (315)
T ss_pred EEEe
Confidence 9986
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=322.28 Aligned_cols=279 Identities=18% Similarity=0.316 Sum_probs=246.8
Q ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcC
Q 002801 569 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648 (879)
Q Consensus 569 ~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~ 648 (879)
.+|..|.|.|+|+.|+||+..|.+.+|+..+ ..+..+...|.+.|+++.|+++ +.+++||+.+|.|++|+.+
T Consensus 97 c~V~~v~WtPeGRRLltgs~SGEFtLWNg~~-------fnFEtilQaHDs~Vr~m~ws~~-g~wmiSgD~gG~iKyWqpn 168 (464)
T KOG0284|consen 97 CPVNVVRWTPEGRRLLTGSQSGEFTLWNGTS-------FNFETILQAHDSPVRTMKWSHN-GTWMISGDKGGMIKYWQPN 168 (464)
T ss_pred cceeeEEEcCCCceeEeecccccEEEecCce-------eeHHHHhhhhcccceeEEEccC-CCEEEEcCCCceEEecccc
Confidence 5799999999999999999999999999754 2233444579999999999995 9999999999999999986
Q ss_pred CCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeE
Q 002801 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRI 727 (879)
Q Consensus 649 ~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I 727 (879)
-.........|...|.+++|+| +...|+++|+||+|+|||....+.-..+..+ -.|.|++|||. ..+|++|+.|..|
T Consensus 169 mnnVk~~~ahh~eaIRdlafSp-nDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~-kgLiasgskDnlV 246 (464)
T KOG0284|consen 169 MNNVKIIQAHHAEAIRDLAFSP-NDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPT-KGLIASGSKDNLV 246 (464)
T ss_pred hhhhHHhhHhhhhhhheeccCC-CCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCc-cceeEEccCCcee
Confidence 4443333344558999999999 8889999999999999999988877777754 45999999999 7799999999999
Q ss_pred EEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC-
Q 002801 728 YYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD- 805 (879)
Q Consensus 728 ~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~- 805 (879)
++||.+++.+ ++++.+|+..|..++|+ ++++|+|+|.|..++++|+++. +.+.++++|...|++++|+|-.
T Consensus 247 KlWDprSg~c-l~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~m------kEl~~~r~Hkkdv~~~~WhP~~~ 319 (464)
T KOG0284|consen 247 KLWDPRSGSC-LATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTM------KELFTYRGHKKDVTSLTWHPLNE 319 (464)
T ss_pred EeecCCCcch-hhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHh------HHHHHhhcchhhheeeccccccc
Confidence 9999999995 99999999999999999 9999999999999999999976 7889999999999999999964
Q ss_pred CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 806 GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 806 ~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
..|++|+.||.|..|.+...+|+..+. .+|.+.|++++|+|-|. +|++|+.|.++++|.
T Consensus 320 ~lftsgg~Dgsvvh~~v~~~~p~~~i~------------~AHd~~iwsl~~hPlGh-il~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 320 SLFTSGGSDGSVVHWVVGLEEPLGEIP------------PAHDGEIWSLAYHPLGH-ILATGSNDRTVRFWT 378 (464)
T ss_pred cceeeccCCCceEEEeccccccccCCC------------cccccceeeeeccccce-eEeecCCCcceeeec
Confidence 588999999999999998666665443 46788899999999999 999999999999995
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-39 Score=316.13 Aligned_cols=220 Identities=19% Similarity=0.187 Sum_probs=178.4
Q ss_pred ccccccccccccCCCCCcccccc-----cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhh---cCC
Q 002801 4 RLLRGERFGVRGDDSNDFELRKH-----SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL---DKP 75 (879)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l---~~~ 75 (879)
+++.|+.++.++-. .+..=+++ .+.-.+...+|+|+|..|. ...++.+.-++|+||||.+|+|.+.+ ++.
T Consensus 40 ~~~~g~l~a~K~i~-f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~-~~f~~~~evlnivmE~c~~GDLsqmIk~~K~q 117 (375)
T KOG0591|consen 40 CLLDGKLVALKKIQ-FGMMDAKARQDCVKEISLLKQLNHPNIVQYYA-HSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQ 117 (375)
T ss_pred eccCcchhhhhhcc-hhhccHHHHHHHHHHHHHHHhcCCchHHHHHH-HhhhccchhhHHHHHhhcccCHHHHHHHHHhc
Confidence 45667777776553 11111222 2333567799999998776 44456666689999999999999988 456
Q ss_pred CCCCChhHHHHHHHHHHHHHHhhhh--cC--cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCC
Q 002801 76 KRSVDVYECLHIFRQIVEIVYAAHS--QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDL 151 (879)
Q Consensus 76 ~~~l~~~~~~~i~~qi~~~l~~lHs--~g--ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 151 (879)
++.+++..++++|.|++.||..+|+ .. |+||||||.||+|+.+|.||+.|||+++.+.....
T Consensus 118 kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t-------------- 183 (375)
T KOG0591|consen 118 KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT-------------- 183 (375)
T ss_pred cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH--------------
Confidence 6789999999999999999999999 45 99999999999999999999999999988633200
Q ss_pred CCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccc
Q 002801 152 SSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQIL 231 (879)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 231 (879)
...+
T Consensus 184 ----------------------------------------------------------------------------fA~S 187 (375)
T KOG0591|consen 184 ----------------------------------------------------------------------------FAHS 187 (375)
T ss_pred ----------------------------------------------------------------------------HHHh
Confidence 1245
Q ss_pred cccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchh-hccChhhHHHHHHhcC
Q 002801 232 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLH 307 (879)
Q Consensus 232 ~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~ 307 (879)
++|||+||+||.+.+.+|+++||||||||++|||.. ||.+. +.......+.++.+||.+ ...+.++..+|..|+.
T Consensus 188 ~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~ 266 (375)
T KOG0591|consen 188 LVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIA 266 (375)
T ss_pred hcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHcc
Confidence 799999999999999999999999999999999988 88665 556666777788887777 5567889999999999
Q ss_pred CCCCCCCCH
Q 002801 308 PEPSGRPKM 316 (879)
Q Consensus 308 ~dP~~Rpt~ 316 (879)
.||..||+.
T Consensus 267 vd~~~RP~t 275 (375)
T KOG0591|consen 267 VDPEQRPDT 275 (375)
T ss_pred CCcccCCCc
Confidence 999999996
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=297.22 Aligned_cols=290 Identities=24% Similarity=0.336 Sum_probs=256.5
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.+.+|.+.|+.+.|+|+|.+|||||.|..|.+|++...... . .....|.+.|..+.|.+ +++.|++++.|.+|
T Consensus 42 ~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-~-----~~lkgHsgAVM~l~~~~-d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 42 LLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-F-----WVLKGHSGAVMELHGMR-DGSHILSCGTDKTV 114 (338)
T ss_pred hcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-e-----eeeccccceeEeeeecc-CCCEEEEecCCceE
Confidence 46699999999999999999999999999999996643221 1 12237999999999998 59999999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEe
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs 722 (879)
+.||+++|++++.+++|.+-|++++-+.....++.||++|++++|||+++...++++..+-++++|.|... +..+.+|+
T Consensus 115 ~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~-s~qv~sgg 193 (338)
T KOG0265|consen 115 RGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDT-SDQVISGG 193 (338)
T ss_pred EEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccc-ccceeecc
Confidence 99999999999999999999999996655667899999999999999999999999999999999999988 78899999
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC--cE--E
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN--VK--N 797 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~--~v--~ 797 (879)
-|+.|++||+|+... .+++.||..+|+.+..+ +|.++.+-+.|+++++||++..... .+++..+.+|.. ++ .
T Consensus 194 Idn~ikvWd~r~~d~-~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~--~R~v~if~g~~hnfeknlL 270 (338)
T KOG0265|consen 194 IDNDIKVWDLRKNDG-LYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPS--QRCVKIFQGHIHNFEKNLL 270 (338)
T ss_pred ccCceeeeccccCcc-eEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCC--CceEEEeecchhhhhhhcc
Confidence 999999999999885 89999999999999999 9999999999999999999976432 366888888754 33 4
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 798 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 798 ~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
.++|+|++.++.+|+.|..|++||......+..+ .+|.+.|.++.|+|..+ +|.+|++|.+|.+=+
T Consensus 271 ~cswsp~~~~i~ags~dr~vyvwd~~~r~~lykl-------------pGh~gsvn~~~Fhp~e~-iils~~sdk~i~lge 336 (338)
T KOG0265|consen 271 KCSWSPNGTKITAGSADRFVYVWDTTSRRILYKL-------------PGHYGSVNEVDFHPTEP-IILSCSSDKTIYLGE 336 (338)
T ss_pred eeeccCCCCccccccccceEEEeecccccEEEEc-------------CCcceeEEEeeecCCCc-EEEEeccCceeEeec
Confidence 5689999999999999999999998776655544 47889999999999999 999999999998644
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=290.65 Aligned_cols=283 Identities=16% Similarity=0.245 Sum_probs=247.8
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
|.||.+.|.++.|++|+++|++++.||++-|||.-+..+... +. -....|-.++|+|. ++.+|+|+-|..+.
T Consensus 51 LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~ha------ip-l~s~WVMtCA~sPS-g~~VAcGGLdN~Cs 122 (343)
T KOG0286|consen 51 LKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHA------IP-LPSSWVMTCAYSPS-GNFVACGGLDNKCS 122 (343)
T ss_pred ecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeE------Ee-cCceeEEEEEECCC-CCeEEecCcCceeE
Confidence 459999999999999999999999999999999876433211 11 13467889999996 99999999999999
Q ss_pred EEEcCCC------eEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCC
Q 002801 644 VWDVSRS------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGR 716 (879)
Q Consensus 644 vwd~~~~------~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~ 716 (879)
||++.+. +..+.+.+|++-+.|+.|-. ..+|+|||.|.+.-+||+++++.+..|.. .+.|.++.+.|.+++
T Consensus 123 iy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~n 200 (343)
T KOG0286|consen 123 IYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGN 200 (343)
T ss_pred EEecccccccccceeeeeecCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCC
Confidence 9999755 45567889999999999985 57899999999999999999999999985 466999999995599
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCC--C
Q 002801 717 SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH--T 793 (879)
Q Consensus 717 ~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h--~ 793 (879)
.+++|+.|+..++||+|.+. .+.+|.+|.+-|++|+|. +|.-++|||.|+++++||++.. ..+..|... .
T Consensus 201 tFvSg~cD~~aklWD~R~~~-c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD------~~~a~ys~~~~~ 273 (343)
T KOG0286|consen 201 TFVSGGCDKSAKLWDVRSGQ-CVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRAD------QELAVYSHDSII 273 (343)
T ss_pred eEEecccccceeeeeccCcc-eeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCC------cEEeeeccCccc
Confidence 99999999999999999997 499999999999999998 9999999999999999999986 556666532 3
Q ss_pred CcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcE
Q 002801 794 NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNI 873 (879)
Q Consensus 794 ~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I 873 (879)
.+|++|+||..|++|.+|..|..+.+||.-.++.+..+ .+|...|+++..+|||. .|+|++.|.++
T Consensus 274 ~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L-------------~GHeNRvScl~~s~DG~-av~TgSWDs~l 339 (343)
T KOG0286|consen 274 CGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVL-------------AGHENRVSCLGVSPDGM-AVATGSWDSTL 339 (343)
T ss_pred CCceeEEEcccccEEEeeecCCceeEeeccccceEEEe-------------eccCCeeEEEEECCCCc-EEEecchhHhe
Confidence 47999999999999999999999999997665554433 47889999999999999 99999999999
Q ss_pred EEEE
Q 002801 874 KILE 877 (879)
Q Consensus 874 ~vw~ 877 (879)
|||.
T Consensus 340 riW~ 343 (343)
T KOG0286|consen 340 RIWA 343 (343)
T ss_pred eecC
Confidence 9994
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-38 Score=341.12 Aligned_cols=204 Identities=22% Similarity=0.245 Sum_probs=169.8
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
++.......|+|+|+++. .++ +....|||.|+|..++|.+++++ .++++|.|++.+++||+.||.|||+++|||||
T Consensus 68 EIeIHr~L~HpnIV~f~~-~FE--Ds~nVYivLELC~~~sL~el~Kr-rk~ltEpEary~l~QIv~GlkYLH~~~IiHRD 143 (592)
T KOG0575|consen 68 EIEIHRSLKHPNIVQFYH-FFE--DSNNVYIVLELCHRGSLMELLKR-RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRD 143 (592)
T ss_pred HHHHHHhcCCCcEEeeee-Eee--cCCceEEEEEecCCccHHHHHHh-cCCCCcHHHHHHHHHHHHHHHHHHhcCceecc
Confidence 344455688999999888 443 45578999999999999999974 47899999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||..||||+.+.+|||+|||+|..+..+..
T Consensus 144 LKLGNlfL~~~~~VKIgDFGLAt~le~~~E-------------------------------------------------- 173 (592)
T KOG0575|consen 144 LKLGNLFLNENMNVKIGDFGLATQLEYDGE-------------------------------------------------- 173 (592)
T ss_pred cchhheeecCcCcEEecccceeeeecCccc--------------------------------------------------
Confidence 999999999999999999999977533210
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
+..+.||||-|.|||++.....++.+||||+||+||.||.
T Consensus 174 ----------------------------------------rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~ 213 (592)
T KOG0575|consen 174 ----------------------------------------RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLV 213 (592)
T ss_pred ----------------------------------------ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhh
Confidence 1234699999999999999999999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||.+..-...+..+.......|. ..+..+++||.++|.+||.+|||+++||.|+||..
T Consensus 214 G~PPFetk~vkety~~Ik~~~Y~~P~--~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~ 274 (592)
T KOG0575|consen 214 GRPPFETKTVKETYNKIKLNEYSMPS--HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKS 274 (592)
T ss_pred CCCCcccchHHHHHHHHHhcCccccc--ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhC
Confidence 77655444444333333333333 66789999999999999999999999999999953
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=330.30 Aligned_cols=208 Identities=19% Similarity=0.263 Sum_probs=170.3
Q ss_pred cCceeecccc-cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 27 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 27 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
|++..+.+.| |+|++..+. +..|... .+|+||||| ..+|.++++.+++.|++..++.|+.||++||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~E-vi~d~~~-~L~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKE-VIRDNDR-ILYFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHH-HhhccCc-eEeeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 5555667778 999999998 6555443 799999999 67999999888899999999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+|||+.....+||+|||+|+...+.
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Sk-------------------------------------------------- 163 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSK-------------------------------------------------- 163 (538)
T ss_pred ccCChhheEecccceeEecccccccccccC--------------------------------------------------
Confidence 999999999998899999999999875221
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~e 264 (879)
. -.|.++-|.||+|||++.... |+.+.||||+|||++|
T Consensus 164 -------------------------------------p----PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 164 -------------------------------------P----PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred -------------------------------------C----CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 0 125678899999999987655 9999999999999999
Q ss_pred hhc--CCCCChhhHhHHhhhccc---------------------CCC--------chhhccChhhHHHHHHhcCCCCCCC
Q 002801 265 LFC--PFSTGEEKTRTMSSLRHR---------------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 265 ll~--pf~~~~~~~~~~~~~~~~---------------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
+.+ |.+++....+.+..+..- .+| ..+...++++..+|.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 999 777665444443222110 011 1223466788999999999999999
Q ss_pred CCHHHHhhcccccCC
Q 002801 314 PKMGELLQSEFLNEP 328 (879)
Q Consensus 314 pt~~evl~hp~~~~~ 328 (879)
|||.|+|+||||+..
T Consensus 283 pTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 283 PTASQALQHPFFQVG 297 (538)
T ss_pred ccHHHHhcCcccccc
Confidence 999999999999854
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-35 Score=285.45 Aligned_cols=272 Identities=21% Similarity=0.290 Sum_probs=237.2
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..+++++.||.+-+||.-+..-..-+. -.+..|-.++|+|.|.++|+||-|+...||++.+..++.. .......
T Consensus 68 r~ivSaSqDGklIvWDs~TtnK~haip-----l~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~-~~v~r~l 141 (343)
T KOG0286|consen 68 RRIVSASQDGKLIVWDSFTTNKVHAIP-----LPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGN-VRVSREL 141 (343)
T ss_pred CeEEeeccCCeEEEEEcccccceeEEe-----cCceeEEEEEECCCCCeEEecCcCceeEEEeccccccccc-ceeeeee
Confidence 334899999999999987633222221 2357899999999999999999999999999985322221 1112234
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
..|.+-++|+.|-+ ...|++++.|.++.+||+++++.+..|.+|.+.|.+++++|.+++.|++|+.|++.+|||++.+
T Consensus 142 ~gHtgylScC~f~d--D~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~ 219 (343)
T KOG0286|consen 142 AGHTGYLSCCRFLD--DNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG 219 (343)
T ss_pred cCccceeEEEEEcC--CCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc
Confidence 57999999999986 7889999999999999999999999999999999999999989999999999999999999999
Q ss_pred ceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC--CCCEEEEEEc-CCCEEEEEEcCCcE
Q 002801 694 VSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH--NKTVSYVKFV-DATTLVSASTDNTL 769 (879)
Q Consensus 694 ~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h--~~~V~~v~fs-~~~~l~s~s~D~~i 769 (879)
.++++|.. .+.|++|+|.|+ |.-|++|+.|++.++||+|..+. +..+... ..+|++|.|+ .|++|++|..|.++
T Consensus 220 ~c~qtF~ghesDINsv~ffP~-G~afatGSDD~tcRlyDlRaD~~-~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c 297 (343)
T KOG0286|consen 220 QCVQTFEGHESDINSVRFFPS-GDAFATGSDDATCRLYDLRADQE-LAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTC 297 (343)
T ss_pred ceeEeecccccccceEEEccC-CCeeeecCCCceeEEEeecCCcE-EeeeccCcccCCceeEEEcccccEEEeeecCCce
Confidence 99999985 567999999999 89999999999999999998874 7777632 4589999999 99999999999999
Q ss_pred EEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 770 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
.+||.-.+ ..+..+.||.+.|.++..+|||..++|||.|..++||.
T Consensus 298 ~vWDtlk~------e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 298 NVWDTLKG------ERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eEeecccc------ceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999887 67889999999999999999999999999999999994
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-37 Score=336.62 Aligned_cols=212 Identities=20% Similarity=0.244 Sum_probs=177.4
Q ss_pred ccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
-.+-|++++.+.-..|+|++..|+ |.+ .+.++|+|.||++||.|+++|-+. +++++.++.++|+||+.||.|+|..
T Consensus 56 ~~~IerEIviMkLi~HpnVl~Lyd-Vwe--~~~~lylvlEyv~gGELFdylv~k-G~l~e~eaa~ff~QIi~gv~yCH~~ 131 (786)
T KOG0588|consen 56 PAGIEREIVIMKLIEHPNVLRLYD-VWE--NKQHLYLVLEYVPGGELFDYLVRK-GPLPEREAAHFFRQILDGVSYCHAF 131 (786)
T ss_pred ccchhhhhHHHHHhcCCCeeeeee-eec--cCceEEEEEEecCCchhHHHHHhh-CCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 346678888888889999999998 544 466899999999999999999554 6799999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
+|+||||||+|+||+..+++||+|||+|..-...+
T Consensus 132 ~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk--------------------------------------------- 166 (786)
T KOG0588|consen 132 NICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK--------------------------------------------- 166 (786)
T ss_pred cceeccCCchhhhhhcccCEeeeccceeecccCCc---------------------------------------------
Confidence 99999999999999999999999999996521110
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCC-CccCcchhHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 260 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGv 260 (879)
+ ...-||+|+|+|||+++|.+| +.++||||.||
T Consensus 167 --------------------------l--------------------LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGV 200 (786)
T KOG0588|consen 167 --------------------------L--------------------LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGV 200 (786)
T ss_pred --------------------------c--------------------ccccCCCcccCCchhhcCCCCCCCccccchhHH
Confidence 0 012499999999999999997 89999999999
Q ss_pred HHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 261 il~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|||.||+ ||..++-. ..+..++++.+ ..+...++++.+||.+||..||++|+|++||+.|||+.....
T Consensus 201 ILfALLtG~LPFdDdNir-~LLlKV~~G~f-~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 201 ILFALLTGKLPFDDDNIR-VLLLKVQRGVF-EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTS 271 (786)
T ss_pred HHHHHHhCCCCCCCccHH-HHHHHHHcCcc-cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCC
Confidence 9999999 99755444 44444455544 222567799999999999999999999999999999976443
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=329.04 Aligned_cols=212 Identities=16% Similarity=0.162 Sum_probs=169.0
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|+-++.+|. -+.| +..+|+|+||+++|+|.++|++- +.|++..++.++.||++||+|||+.|||||||||+||||
T Consensus 132 ~hPgivkLy~-TFQD--~~sLYFvLe~A~nGdll~~i~K~-Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL 207 (604)
T KOG0592|consen 132 GHPGIVKLYF-TFQD--EESLYFVLEYAPNGDLLDLIKKY-GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL 207 (604)
T ss_pred CCCCeEEEEE-Eeec--ccceEEEEEecCCCcHHHHHHHh-CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE
Confidence 7888888777 4444 44689999999999999999766 789999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++++||+|||.|+.+........ ..+..
T Consensus 208 d~dmhikITDFGsAK~l~~~~~~~~-------------------------------------------------~~~~~- 237 (604)
T KOG0592|consen 208 DKDGHIKITDFGSAKILSPSQKSQE-------------------------------------------------NPVDP- 237 (604)
T ss_pred cCCCcEEEeeccccccCChhhcccc-------------------------------------------------CccCc-
Confidence 9999999999999998644311100 00000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
.+.. .+...++||..|.+||++.....++++|||+||||||.|++ ||...
T Consensus 238 -------------------------~~a~--s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~ 290 (604)
T KOG0592|consen 238 -------------------------NQAS--SRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAA 290 (604)
T ss_pred -------------------------cccc--CcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccc
Confidence 0000 01245799999999999999999999999999999999999 77666
Q ss_pred hhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 273 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
.+......++.-.. +.+...++.+.+||.++|..||.+|+|+.||.+||||.++..
T Consensus 291 NeyliFqkI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw 346 (604)
T KOG0592|consen 291 NEYLIFQKIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDW 346 (604)
T ss_pred cHHHHHHHHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCCh
Confidence 65554444443322 222344478899999999999999999999999999998654
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=281.38 Aligned_cols=275 Identities=17% Similarity=0.268 Sum_probs=236.7
Q ss_pred CCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe--EEEEec
Q 002801 580 GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ--VLTEMR 657 (879)
Q Consensus 580 g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~--~~~~~~ 657 (879)
.-+|||+|.|-+|++|...++....... ...+.|+.++..|. +..||+++ ...|++||++++. ++..|.
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~C~rTiq-------h~dsqVNrLeiTpd-k~~LAaa~-~qhvRlyD~~S~np~Pv~t~e 80 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGICSRTIQ-------HPDSQVNRLEITPD-KKDLAAAG-NQHVRLYDLNSNNPNPVATFE 80 (311)
T ss_pred ceEEEeccCcceeeeeehhcCeEEEEEe-------cCccceeeEEEcCC-cchhhhcc-CCeeEEEEccCCCCCceeEEe
Confidence 4589999999999999998865432221 24578999999994 88888887 5789999998764 689999
Q ss_pred cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCce
Q 002801 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI 737 (879)
Q Consensus 658 ~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~ 737 (879)
+|++.|++|.|.. +|..++|||+||+++|||++...+.+.+.+.++|++|..+|+ ...|++|..+|.|++||+++...
T Consensus 81 ~h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpn-QteLis~dqsg~irvWDl~~~~c 158 (311)
T KOG0315|consen 81 GHTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPN-QTELISGDQSGNIRVWDLGENSC 158 (311)
T ss_pred ccCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCC-cceEEeecCCCcEEEEEccCCcc
Confidence 9999999999998 999999999999999999999888899999999999999999 78899999999999999998753
Q ss_pred eeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCc
Q 002801 738 PLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNE 816 (879)
Q Consensus 738 ~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~ 816 (879)
.-.-.......|.++... ||..|+.+...|.+.+|++..........|+..|+.|..-+..+.+||+++|||++|.|.+
T Consensus 159 ~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdkt 238 (311)
T KOG0315|consen 159 THELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKT 238 (311)
T ss_pred ccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCce
Confidence 222233345678899887 9999999999999999999887666667889999999999999999999999999999999
Q ss_pred EEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 817 VFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 817 v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
|+||+.+.- ++ ......+|..+|+..+|+.+|. +|+||++|+..++|++
T Consensus 239 v~iwn~~~~-----~k-------le~~l~gh~rWvWdc~FS~dg~-YlvTassd~~~rlW~~ 287 (311)
T KOG0315|consen 239 VKIWNTDDF-----FK-------LELVLTGHQRWVWDCAFSADGE-YLVTASSDHTARLWDL 287 (311)
T ss_pred EEEEecCCc-----ee-------eEEEeecCCceEEeeeeccCcc-EEEecCCCCceeeccc
Confidence 999998753 11 0012267889999999999999 9999999999999986
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=298.97 Aligned_cols=309 Identities=21% Similarity=0.338 Sum_probs=266.7
Q ss_pred eecccccCceEEEeecC----cEEEEEecccc-----ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcc
Q 002801 536 WINPFLEGLCKYLSFSK----LRVKADLNQGD-----LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD 606 (879)
Q Consensus 536 ~~~~~~d~~i~~w~~~~----~~~~~~l~~~~-----l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~ 606 (879)
+.++..+-+.++|++.. +.....|++.. -......|++++|+.+|..||||..||.++||+........
T Consensus 194 lasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~t-- 271 (524)
T KOG0273|consen 194 LASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSEDGEARIWNKDGNLIST-- 271 (524)
T ss_pred hhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeecCcEEEEEecCchhhhh--
Confidence 45667788999998764 22223333221 11234689999999999999999999999999987632221
Q ss_pred cccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEE
Q 002801 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (879)
Q Consensus 607 ~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~ 686 (879)
.-.|+++|.+|.|+.. +.+|++++-||++.+||..+++....+..|..+.-.|.|- +...|++++.|+.|+
T Consensus 272 ------l~~HkgPI~slKWnk~-G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~--~~~~F~ts~td~~i~ 342 (524)
T KOG0273|consen 272 ------LGQHKGPIFSLKWNKK-GTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQ--SNDEFATSSTDGCIH 342 (524)
T ss_pred ------hhccCCceEEEEEcCC-CCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEe--cCceEeecCCCceEE
Confidence 1248999999999985 9999999999999999999999999999999988889997 467899999999999
Q ss_pred EEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-C--------
Q 002801 687 LWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-D-------- 756 (879)
Q Consensus 687 iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~-------- 756 (879)
++-+....++.++. |+++|.++.|+|. +.+|+++|.|++++||....... ...+.+|.+.|+.+.|+ +
T Consensus 343 V~kv~~~~P~~t~~GH~g~V~alk~n~t-g~LLaS~SdD~TlkiWs~~~~~~-~~~l~~Hskei~t~~wsp~g~v~~n~~ 420 (524)
T KOG0273|consen 343 VCKVGEDRPVKTFIGHHGEVNALKWNPT-GSLLASCSDDGTLKIWSMGQSNS-VHDLQAHSKEIYTIKWSPTGPVTSNPN 420 (524)
T ss_pred EEEecCCCcceeeecccCceEEEEECCC-CceEEEecCCCeeEeeecCCCcc-hhhhhhhccceeeEeecCCCCccCCCc
Confidence 99999999998887 4677999999999 89999999999999999988774 88899999999999996 3
Q ss_pred -CCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCC
Q 002801 757 -ATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 757 -~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~ 835 (879)
+..|++++.|++|++||+..+ .++++|..|+.+|++|+|||+|+|+|+|+-||.|.+|+..+++...++.
T Consensus 421 ~~~~l~sas~dstV~lwdv~~g------v~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~--- 491 (524)
T KOG0273|consen 421 MNLMLASASFDSTVKLWDVESG------VPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQ--- 491 (524)
T ss_pred CCceEEEeecCCeEEEEEccCC------ceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEeec---
Confidence 347999999999999999998 8999999999999999999999999999999999999999988777654
Q ss_pred CCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 836 ADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 836 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..+.|..|||+-+|+ .|.++-+||.+++.|+
T Consensus 492 -----------~~~~Ifel~Wn~~G~-kl~~~~sd~~vcvldl 522 (524)
T KOG0273|consen 492 -----------GTGGIFELCWNAAGD-KLGACASDGSVCVLDL 522 (524)
T ss_pred -----------CCCeEEEEEEcCCCC-EEEEEecCCCceEEEe
Confidence 234599999999999 9999999999999986
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=316.49 Aligned_cols=205 Identities=19% Similarity=0.224 Sum_probs=167.9
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+||-++..+. . ......+|||++|+.||.|+-+|.+. +.+++..++.++.+|+.||.|||++|||||||||+
T Consensus 79 L~~v~hPFiv~l~y-s--FQt~~kLylVld~~~GGeLf~hL~~e-g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPE 154 (357)
T KOG0598|consen 79 LSKIKHPFIVKLIY-S--FQTEEKLYLVLDYLNGGELFYHLQRE-GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPE 154 (357)
T ss_pred HHhCCCCcEeeeEE-e--cccCCeEEEEEeccCCccHHHHHHhc-CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHH
Confidence 44578888888776 2 33456899999999999999999655 67999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||||+..|+++|+|||+|+..-....
T Consensus 155 NILLd~~GHi~LtDFgL~k~~~~~~~------------------------------------------------------ 180 (357)
T KOG0598|consen 155 NILLDEQGHIKLTDFGLCKEDLKDGD------------------------------------------------------ 180 (357)
T ss_pred HeeecCCCcEEEeccccchhcccCCC------------------------------------------------------
Confidence 99999999999999999986311100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
....+|||+.|||||++.+.+|+.++|+|||||+||||++ |
T Consensus 181 ------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pP 224 (357)
T KOG0598|consen 181 ------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPP 224 (357)
T ss_pred ------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCC
Confidence 1133699999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC----CHHHHhhcccccCCcCc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEPRDS 331 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~evl~hp~~~~~~~~ 331 (879)
|...........++... .+..+.-.++.+++++.++|..||++|. .+.++-.||||..+...
T Consensus 225 F~~~~~~~~~~~I~~~k-~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~ 290 (357)
T KOG0598|consen 225 FYAEDVKKMYDKILKGK-LPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWE 290 (357)
T ss_pred CcCccHHHHHHHHhcCc-CCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence 75554444444444443 3333333568899999999999999995 68999999999987644
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=275.38 Aligned_cols=277 Identities=17% Similarity=0.279 Sum_probs=242.6
Q ss_pred ceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
-++++..|.+|++|...++++.+++++.+ +.|+.+.+.||++.||+|+. ..|++||+.+.... |+..+
T Consensus 12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~d-----sqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~------Pv~t~ 79 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQALTGICSRTIQHPD-----SQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPN------PVATF 79 (311)
T ss_pred EEEeccCcceeeeeehhcCeEEEEEecCc-----cceeeEEEcCCcchhhhccC-CeeEEEEccCCCCC------ceeEE
Confidence 34788999999999999999999998655 68999999999999998887 49999999875332 34443
Q ss_pred -ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 615 -ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 615 -~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
.|...|..+.|.- ++.++++|+.||+++|||++...+.+.| .|..+|++|..+| +...|++|..+|.|++||+...
T Consensus 80 e~h~kNVtaVgF~~-dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhp-nQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 80 EGHTKNVTAVGFQC-DGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHP-NQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred eccCCceEEEEEee-cCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecC-CcceEEeecCCCcEEEEEccCC
Confidence 4778999999987 5999999999999999999987777666 4789999999999 8889999999999999999988
Q ss_pred ceEEEEec--CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc-----eeeEEEccCCCCEEEEEEc-CCCEEEEEEc
Q 002801 694 VSIGTIKT--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-----IPLCTLIGHNKTVSYVKFV-DATTLVSAST 765 (879)
Q Consensus 694 ~~i~~~~~--~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~-----~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~ 765 (879)
.+...+-. ...|.++...|+ |.+++.+..-|..++|++-+.. .|+..++.|...+..+.++ ++++|+++|.
T Consensus 157 ~c~~~liPe~~~~i~sl~v~~d-gsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ss 235 (311)
T KOG0315|consen 157 SCTHELIPEDDTSIQSLTVMPD-GSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSS 235 (311)
T ss_pred ccccccCCCCCcceeeEEEcCC-CcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecC
Confidence 76665543 456999999999 8899999999999999997643 5788899999999999999 9999999999
Q ss_pred CCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecc
Q 002801 766 DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 766 D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~ 832 (879)
|.+++||++... .+.-..+.+|...++.++||.+|+||+|||.|+.+++|++..++.+..+.
T Consensus 236 dktv~iwn~~~~-----~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~ 297 (311)
T KOG0315|consen 236 DKTVKIWNTDDF-----FKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQ 297 (311)
T ss_pred CceEEEEecCCc-----eeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecC
Confidence 999999999886 25567888999999999999999999999999999999999888776553
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=317.47 Aligned_cols=240 Identities=17% Similarity=0.189 Sum_probs=187.2
Q ss_pred cccccccccCC--CCCccc--ccccCceeecccccccCCCCCCccccc---ccccCceEEEEeeCCcchhhhhcCCCCCC
Q 002801 7 RGERFGVRGDD--SNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (879)
Q Consensus 7 ~~~~~~~~~~~--~~~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~lv~e~~~g~sL~~~l~~~~~~l 79 (879)
.|++++++.-. -....+ |..|++..+.|..|.|++..+. +... +.-.+.|+|+|++ +.+|.+.|+.. ..|
T Consensus 46 t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~d-i~~p~~~~~f~DvYiV~elM-etDL~~iik~~-~~L 122 (359)
T KOG0660|consen 46 TGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLD-IFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQ-QDL 122 (359)
T ss_pred CCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEe-ecccccccccceeEEehhHH-hhHHHHHHHcC-ccc
Confidence 45777776543 122222 6668888888889999998887 4433 4456899999999 88999999665 459
Q ss_pred ChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchh
Q 002801 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 80 ~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
+...+..++.||++||.|+||.+|+||||||+|++++.+..+||+|||+|+.......+
T Consensus 123 ~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~--------------------- 181 (359)
T KOG0660|consen 123 TDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFED--------------------- 181 (359)
T ss_pred cHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcc---------------------
Confidence 99999999999999999999999999999999999999999999999999875322000
Q ss_pred hhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccccccee
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
.-+|..+.|.||+
T Consensus 182 -------------------------------------------------------------------~~mTeYVaTRWYR 194 (359)
T KOG0660|consen 182 -------------------------------------------------------------------GFMTEYVATRWYR 194 (359)
T ss_pred -------------------------------------------------------------------cchhcceeeeeec
Confidence 0236678899999
Q ss_pred ccccccC-CCCCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhc---------------------------cc---C
Q 002801 240 SPEELAG-APVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLR---------------------------HR---V 286 (879)
Q Consensus 240 aPE~~~~-~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~---------------------------~~---~ 286 (879)
|||++.. ..|+.+.||||+||||.||++ |.+.+......+..+. .. .
T Consensus 195 APElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~ 274 (359)
T KOG0660|consen 195 APELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQP 274 (359)
T ss_pred CHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCC
Confidence 9999865 459999999999999999999 7666644333322211 10 1
Q ss_pred CCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchHHHHH
Q 002801 287 LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREA 337 (879)
Q Consensus 287 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~e~~~ 337 (879)
+...++...+.+.+|+.+||..||.+|+|++|+|+||||.....+..|...
T Consensus 275 f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP~~ 325 (359)
T KOG0660|consen 275 FSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEPVC 325 (359)
T ss_pred HHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCCCC
Confidence 112345667889999999999999999999999999999988877776543
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=292.89 Aligned_cols=283 Identities=20% Similarity=0.300 Sum_probs=255.7
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+.+|...|+.+-|+|+-.++++++.|++|++||+.++..+. ...+|...+.+|+|+.+ +.+|++++.|-.++
T Consensus 104 l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~-------~LrGHt~sv~di~~~a~-Gk~l~tcSsDl~~~ 175 (406)
T KOG0295|consen 104 LAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELER-------SLRGHTDSVFDISFDAS-GKYLATCSSDLSAK 175 (406)
T ss_pred hhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhh-------hhhccccceeEEEEecC-ccEEEecCCccchh
Confidence 45899999999999999999999999999999998754421 11357788999999986 89999999999999
Q ss_pred EEEcCC-CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc-eEEEEeeCCCCCEEEEE
Q 002801 644 VWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-VCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 644 vwd~~~-~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~-v~~v~~~p~~~~~l~tg 721 (879)
+||..+ .++++.+.+|+..|.++.|-| .+.+++|++.|.+|+.|++.++.++.++..+.. |..|+.+.| |.++|++
T Consensus 176 LWd~~~~~~c~ks~~gh~h~vS~V~f~P-~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~D-Gti~As~ 253 (406)
T KOG0295|consen 176 LWDFDTFFRCIKSLIGHEHGVSSVFFLP-LGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQD-GTIIASC 253 (406)
T ss_pred heeHHHHHHHHHHhcCcccceeeEEEEe-cCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCC-eeEEEec
Confidence 999977 567778889999999999999 899999999999999999999999999997655 999999998 9999999
Q ss_pred eCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-----------CC-----CEEEEEEcCCcEEEEecCCCcccccCCc
Q 002801 722 SADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-----------DA-----TTLVSASTDNTLKLWDLSMCTSRVIDTP 785 (879)
Q Consensus 722 s~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-----------~~-----~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 785 (879)
+.|.+|++|-+.+... ...+..|..+|.+++|. .+ .+++++|.|++|++||+.++ .+
T Consensus 254 s~dqtl~vW~~~t~~~-k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg------~c 326 (406)
T KOG0295|consen 254 SNDQTLRVWVVATKQC-KAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTG------MC 326 (406)
T ss_pred CCCceEEEEEeccchh-hhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCC------eE
Confidence 9999999999998863 67888999999999982 22 58999999999999999998 89
Q ss_pred eEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEE
Q 002801 786 LHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLV 865 (879)
Q Consensus 786 ~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~ 865 (879)
+.++.||.+.|..++|+|.|+||+++.+|+++++||+....++..+ ..|..+|+++.|+.+.+ +++
T Consensus 327 L~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~-------------~ah~hfvt~lDfh~~~p-~Vv 392 (406)
T KOG0295|consen 327 LFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTL-------------EAHEHFVTSLDFHKTAP-YVV 392 (406)
T ss_pred EEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeecc-------------CCCcceeEEEecCCCCc-eEE
Confidence 9999999999999999999999999999999999999988776554 46788999999999999 999
Q ss_pred EEeCCCcEEEEE
Q 002801 866 AANSSGNIKILE 877 (879)
Q Consensus 866 s~~~Dg~I~vw~ 877 (879)
||+-|..+|+|+
T Consensus 393 TGsVdqt~KvwE 404 (406)
T KOG0295|consen 393 TGSVDQTVKVWE 404 (406)
T ss_pred eccccceeeeee
Confidence 999999999997
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-36 Score=331.30 Aligned_cols=204 Identities=23% Similarity=0.325 Sum_probs=168.9
Q ss_pred Cceeecccc-cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 28 DGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 28 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
+...+.+.. |+|++..+. +...+. ..|+|||||.||+|.+++.+ .+++.+.+++.+|+||+.||+|||++||+||
T Consensus 69 Ei~~~~~~~~HpnI~~l~e-v~~t~~--~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HR 144 (370)
T KOG0583|consen 69 EISILRRLRSHPNIIRLLE-VFATPT--KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHR 144 (370)
T ss_pred HHHHHHHhccCCCEeEEEE-EEecCC--eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeC
Confidence 334445555 888888887 655443 48999999999999999977 5789999999999999999999999999999
Q ss_pred cCCCcceeeccC-CCeeeeecccccCCC-CCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 107 NVRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 107 DlKP~NIll~~~-~~vkl~dfg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||+|||++.+ +.+||+|||++.... ...
T Consensus 145 DLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~------------------------------------------------ 176 (370)
T KOG0583|consen 145 DLKPENILLDGNEGNLKLSDFGLSAISPGEDG------------------------------------------------ 176 (370)
T ss_pred CCCHHHEEecCCCCCEEEeccccccccCCCCC------------------------------------------------
Confidence 999999999999 999999999997642 110
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-C-CccCcchhHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-V-SCASDIYRLGVLL 262 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~-~~~sDIwSlGvil 262 (879)
.....+||+.|+|||++.+.. | +.++||||+||+|
T Consensus 177 -------------------------------------------~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViL 213 (370)
T KOG0583|consen 177 -------------------------------------------LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVIL 213 (370)
T ss_pred -------------------------------------------cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHH
Confidence 113469999999999999987 8 5899999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|.|++ ||...................|.+.. ++++..|+.+||..||.+|+|+.+++.||||+.
T Consensus 214 y~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~-S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 214 YVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL-SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC-CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 99999 99775544444444444443444433 799999999999999999999999999999996
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=318.71 Aligned_cols=216 Identities=20% Similarity=0.192 Sum_probs=171.0
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
++...+...+|+|+|..++..-..+. ...+|.|||+.||+|.+++++.+++|++..++.+.+||++||.|||++|||||
T Consensus 63 ~Ei~iL~~l~~p~IV~~~G~~~~~~~-~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~ 141 (313)
T KOG0198|consen 63 REIRILSRLNHPNIVQYYGSSSSREN-DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHC 141 (313)
T ss_pred HHHHHHHhCCCCCEEeeCCccccccC-eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecc
Confidence 33444566669999988872122221 35899999999999999997765589999999999999999999999999999
Q ss_pred cCCCcceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 107 NVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 107 DlKP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
||||+|||++. ++.+||+|||+++........
T Consensus 142 DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~----------------------------------------------- 174 (313)
T KOG0198|consen 142 DIKPANILLDPSNGDVKLADFGLAKKLESKGTK----------------------------------------------- 174 (313)
T ss_pred CcccceEEEeCCCCeEEeccCcccccccccccc-----------------------------------------------
Confidence 99999999999 699999999999765320000
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~e 264 (879)
+.......||+.|||||++..+ ...+++|||||||++.|
T Consensus 175 ----------------------------------------~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvE 214 (313)
T KOG0198|consen 175 ----------------------------------------SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVE 214 (313)
T ss_pred ----------------------------------------ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEe
Confidence 0011235899999999999863 24469999999999999
Q ss_pred hhc---CCCC-ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 265 LFC---PFST-GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 265 ll~---pf~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|+| ||.. ................|+.+...++++.+|+.+|+..||++||||.++|+|||+.....
T Consensus 215 M~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 215 MLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred ccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999 6654 33444455555566566666678889999999999999999999999999999986443
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-34 Score=286.20 Aligned_cols=289 Identities=20% Similarity=0.343 Sum_probs=249.7
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+.+|.+.|.||++.|-.++|+||+.|++|+|||+.++... ....+|...|..+++++. ..++++++.|+.|+
T Consensus 147 i~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lk-------ltltGhi~~vr~vavS~r-HpYlFs~gedk~VK 218 (460)
T KOG0285|consen 147 ISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLK-------LTLTGHIETVRGVAVSKR-HPYLFSAGEDKQVK 218 (460)
T ss_pred hhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEE-------Eeecchhheeeeeeeccc-CceEEEecCCCeeE
Confidence 4599999999999999999999999999999999985332 222348889999999985 88999999999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEe
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs 722 (879)
.||++..+.++.|.+|-..|.|++.+| .-..|++|+.|.+++|||+++...+..+. |...|++|.+.|. ...+++||
T Consensus 219 CwDLe~nkvIR~YhGHlS~V~~L~lhP-Tldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~-dpqvit~S 296 (460)
T KOG0285|consen 219 CWDLEYNKVIRHYHGHLSGVYCLDLHP-TLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPT-DPQVITGS 296 (460)
T ss_pred EEechhhhhHHHhccccceeEEEeccc-cceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecC-CCceEEec
Confidence 999999999999999999999999999 78899999999999999999999999998 5677999999988 55789999
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEE
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGL 801 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 801 (879)
.|++|++||++.++. ..++..|+..|.+++.+ ....++|+|.|+ |+.|++..+ ..+..+.+|...+++++.
T Consensus 297 ~D~tvrlWDl~agkt-~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g------~f~~nlsgh~~iintl~~ 368 (460)
T KOG0285|consen 297 HDSTVRLWDLRAGKT-MITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEG------EFLQNLSGHNAIINTLSV 368 (460)
T ss_pred CCceEEEeeeccCce-eEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCcc------chhhccccccceeeeeee
Confidence 999999999999995 88888999999999998 777888888876 999999987 566779999999999988
Q ss_pred ecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 802 SVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 802 sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
..| .++++|+++|.+.+||.+++..-+... .+.+.-.-.....|.+.||...+. .|++|..|.+|++|.
T Consensus 369 nsD-~v~~~G~dng~~~fwdwksg~nyQ~~~-----t~vqpGSl~sEagI~as~fDktg~-rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 369 NSD-GVLVSGGDNGSIMFWDWKSGHNYQRGQ-----TIVQPGSLESEAGIFASCFDKTGS-RLITGEADKTIKMYK 437 (460)
T ss_pred ccC-ceEEEcCCceEEEEEecCcCccccccc-----ccccCCccccccceeEEeecccCc-eEEeccCCcceEEEe
Confidence 754 578899999999999999875443321 111111123345699999999999 999999999999996
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=270.62 Aligned_cols=292 Identities=23% Similarity=0.357 Sum_probs=238.2
Q ss_pred cccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 563 DLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
.+.+|.+.|..++|+|- |..|||||.|+.|+||+.... .......++.-.|+..|.+++|+|. +++|+++++|.+
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~---~s~~ck~vld~~hkrsVRsvAwsp~-g~~La~aSFD~t 84 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG---DSWTCKTVLDDGHKRSVRSVAWSPH-GRYLASASFDAT 84 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC---CcEEEEEeccccchheeeeeeecCC-CcEEEEeeccce
Confidence 35589999999999997 899999999999999998741 1122223344468999999999995 899999999999
Q ss_pred EEEEEcCC--CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC---ceEEEEec-CCceEEEEeeCCCC
Q 002801 642 VQVWDVSR--SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG---VSIGTIKT-KANVCCVQFPLDSG 715 (879)
Q Consensus 642 V~vwd~~~--~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~---~~i~~~~~-~~~v~~v~~~p~~~ 715 (879)
+.||.-.. .+++..+.+|+..|-|++|++ +|++||++|.|.+|.||.+..+ .++..++. ...|-.|.|||. .
T Consensus 85 ~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~-sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt-~ 162 (312)
T KOG0645|consen 85 VVIWKKEDGEFECVATLEGHENEVKCVAWSA-SGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPT-E 162 (312)
T ss_pred EEEeecCCCceeEEeeeeccccceeEEEEcC-CCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCC-c
Confidence 99998654 368899999999999999999 9999999999999999999754 45666664 456999999998 7
Q ss_pred CEEEEEeCCCeEEEEEcCCCc--eeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCC
Q 002801 716 RSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 792 (879)
Q Consensus 716 ~~l~tgs~d~~I~iwDl~~~~--~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h 792 (879)
.+|+++|.|.+|++|+-.... ..+.++.+|...|.++.|. .|..|++++.|++++||-.... +. .-|
T Consensus 163 dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~--------~~--~~~ 232 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD--------LS--GMH 232 (312)
T ss_pred ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC--------cc--hhc
Confidence 899999999999999876322 4588899999999999999 8999999999999999986643 11 127
Q ss_pred CCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCc
Q 002801 793 TNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGN 872 (879)
Q Consensus 793 ~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~ 872 (879)
...++.|.|. ...||++++|+.|++|.....-.--.++ +.......|..-|++|+|+|...+.|++|+.||.
T Consensus 233 sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~------l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~ 304 (312)
T KOG0645|consen 233 SRALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWN------LLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGI 304 (312)
T ss_pred ccceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHH------HHHhhhcccccccceEEEcCCCCCceeecCCCce
Confidence 7889999998 6789999999999999876321111111 1111225788899999999974448999999999
Q ss_pred EEEEEe
Q 002801 873 IKILEM 878 (879)
Q Consensus 873 I~vw~l 878 (879)
|++|++
T Consensus 305 v~~W~l 310 (312)
T KOG0645|consen 305 VNFWEL 310 (312)
T ss_pred EEEEEe
Confidence 999986
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-36 Score=322.64 Aligned_cols=209 Identities=17% Similarity=0.215 Sum_probs=170.3
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
.+.+.+....|+|+|.++..+-.. ..+++||||++||+|.+.+... .+++.++..|+++++.||.|||.+|||||
T Consensus 319 nEi~Vm~~~~H~NiVnfl~Sylv~---deLWVVMEym~ggsLTDvVt~~--~~~E~qIA~Icre~l~aL~fLH~~gIiHr 393 (550)
T KOG0578|consen 319 NEILVMRDLHHPNIVNFLDSYLVG---DELWVVMEYMEGGSLTDVVTKT--RMTEGQIAAICREILQGLKFLHARGIIHR 393 (550)
T ss_pred HHHHHHHhccchHHHHHHHHhccc---ceeEEEEeecCCCchhhhhhcc--cccHHHHHHHHHHHHHHHHHHHhcceeee
Confidence 344455567788888877744433 5689999999999999999554 48999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
|||.+|||++.+|.+||+|||+|..+.....
T Consensus 394 DIKSDnILL~~~g~vKltDFGFcaqi~~~~~------------------------------------------------- 424 (550)
T KOG0578|consen 394 DIKSDNILLTMDGSVKLTDFGFCAQISEEQS------------------------------------------------- 424 (550)
T ss_pred ccccceeEeccCCcEEEeeeeeeeccccccC-------------------------------------------------
Confidence 9999999999999999999999987532200
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
+....+|||+|||||++....|++++||||||++++||+
T Consensus 425 -----------------------------------------KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMv 463 (550)
T KOG0578|consen 425 -----------------------------------------KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMV 463 (550)
T ss_pred -----------------------------------------ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHh
Confidence 234579999999999999999999999999999999999
Q ss_pred c---CCCCChhhHhHHhhhcc-cCC-CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 267 C---PFSTGEEKTRTMSSLRH-RVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
- ||..+... .++..+.. +.. -......++.+++|+.+||+.||.+|+++.|+|+||||+....+
T Consensus 464 eGEPPYlnE~Pl-rAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ 532 (550)
T KOG0578|consen 464 EGEPPYLNENPL-RALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPE 532 (550)
T ss_pred cCCCCccCCChH-HHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCH
Confidence 9 77764444 34433333 222 23445678999999999999999999999999999999654333
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=314.79 Aligned_cols=251 Identities=20% Similarity=0.339 Sum_probs=226.2
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCccc----------CcC--------------cccccceEEeccCCCee
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII----------NEN--------------RDIHYPVVEMASRSKLS 621 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~----------~~~--------------~~~~~~~~~~~~~~~i~ 621 (879)
+....|+|+.|++|+.+||.|-.|..|++|.+.... ... ..........+|.++|.
T Consensus 376 nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVy 455 (707)
T KOG0263|consen 376 NTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVY 455 (707)
T ss_pred EcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCcee
Confidence 345689999999999999999999999999987310 000 00011223568999999
Q ss_pred EEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec
Q 002801 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT 701 (879)
Q Consensus 622 ~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~ 701 (879)
.+.|+|. .++|++|+.|++|++|.+.+..++-.+++|..+||.+.|+| -|-+|||+|.|++.++|.....++++.+..
T Consensus 456 g~sFsPd-~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P-~GyYFatas~D~tArLWs~d~~~PlRifag 533 (707)
T KOG0263|consen 456 GCSFSPD-RRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAP-RGYYFATASHDQTARLWSTDHNKPLRIFAG 533 (707)
T ss_pred eeeeccc-ccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecC-CceEEEecCCCceeeeeecccCCchhhhcc
Confidence 9999995 99999999999999999999999999999999999999999 899999999999999999999999988875
Q ss_pred -CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcc
Q 002801 702 -KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTS 779 (879)
Q Consensus 702 -~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~ 779 (879)
-+.|.|++|||+ .+|+++||.|.+|++||+.++.. +..|.||.++|++|+|+ +|.+|+||+.|+.|++||+.++
T Consensus 534 hlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~-VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~-- 609 (707)
T KOG0263|consen 534 HLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNS-VRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANG-- 609 (707)
T ss_pred cccccceEEECCc-ccccccCCCCceEEEEEcCCCcE-EEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCC--
Confidence 467999999999 89999999999999999999985 99999999999999999 9999999999999999999997
Q ss_pred cccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCC
Q 002801 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 826 (879)
Q Consensus 780 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~ 826 (879)
..+..+.+|++.|+++.||.+|..||+||.|++|++||+....
T Consensus 610 ----~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~ 652 (707)
T KOG0263|consen 610 ----SLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVI 652 (707)
T ss_pred ----cchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhhc
Confidence 7889999999999999999999999999999999999987543
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=298.99 Aligned_cols=227 Identities=16% Similarity=0.227 Sum_probs=169.3
Q ss_pred cccccccccC-CCC-Ccccccc--cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChh
Q 002801 7 RGERFGVRGD-DSN-DFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~-~~~-~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~ 82 (879)
.|+.++++.- ++. +...++. |+...+....|+|.|.... ||. -...+++|.|||+..-|.+ |.+....++..
T Consensus 26 TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiE-VFr--rkrklhLVFE~~dhTvL~e-Le~~p~G~~~~ 101 (396)
T KOG0593|consen 26 TGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIE-VFR--RKRKLHLVFEYCDHTVLHE-LERYPNGVPSE 101 (396)
T ss_pred cccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHH-HHH--hcceeEEEeeecchHHHHH-HHhccCCCCHH
Confidence 3555665432 222 2333332 4555556667777777666 553 3557899999997655544 54555668999
Q ss_pred HHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhh
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
.++.|++|++.|+.|+|++++|||||||+||||+.+|.+|+||||.|+.+..+..
T Consensus 102 ~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd------------------------- 156 (396)
T KOG0593|consen 102 LVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD------------------------- 156 (396)
T ss_pred HHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcc-------------------------
Confidence 9999999999999999999999999999999999999999999999988632200
Q ss_pred hhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccc
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
..|.++-|.||+|||
T Consensus 157 -----------------------------------------------------------------~YTDYVATRWYRaPE 171 (396)
T KOG0593|consen 157 -----------------------------------------------------------------NYTDYVATRWYRAPE 171 (396)
T ss_pred -----------------------------------------------------------------hhhhhhhhhhccChh
Confidence 125678899999999
Q ss_pred cccC-CCCCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhccc--------------------C-CC---------c
Q 002801 243 ELAG-APVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR--------------------V-LP---------P 289 (879)
Q Consensus 243 ~~~~-~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~~--------------------~-~~---------~ 289 (879)
.+.| .+|+.++||||+||++.||++ |++++.........++.. . +| .
T Consensus 172 LLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~ 251 (396)
T KOG0593|consen 172 LLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLER 251 (396)
T ss_pred hhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhh
Confidence 9998 569999999999999999999 877766554443332210 0 01 1
Q ss_pred hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 290 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
..+..+..+.+|+.+||+.||.+|++.+|+|.||||+.
T Consensus 252 k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 252 KYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred hcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence 12233445679999999999999999999999999954
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=311.52 Aligned_cols=228 Identities=14% Similarity=0.181 Sum_probs=178.3
Q ss_pred cccccccccCCCC--Cccccc--ccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChh
Q 002801 7 RGERFGVRGDDSN--DFELRK--HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~~--~~~~r~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~ 82 (879)
.|.+++++.-... ...-++ +.+...+...+|+|+|++++ .+. .....|||||||.||+|.+||++. +.+++.
T Consensus 34 ~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d-~~~--~~~~i~lVMEyC~gGDLs~yi~~~-~~l~e~ 109 (429)
T KOG0595|consen 34 SGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLD-CIE--DDDFIYLVMEYCNGGDLSDYIRRR-GRLPEA 109 (429)
T ss_pred CCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEE-EEe--cCCeEEEEEEeCCCCCHHHHHHHc-CCCCHH
Confidence 3455555544433 333344 45666677788999999998 443 344789999999999999999665 578999
Q ss_pred HHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccC------CCeeeeecccccCCCCCCcccccccccccccCCCCCCc
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~------~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (879)
.+++++.||+.||++||+++||||||||+||||+.. -.+||+|||+|+.+.....
T Consensus 110 t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~------------------- 170 (429)
T KOG0595|consen 110 TARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSM------------------- 170 (429)
T ss_pred HHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhH-------------------
Confidence 999999999999999999999999999999999864 3589999999988632211
Q ss_pred chhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccccc
Q 002801 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (879)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (879)
....||++
T Consensus 171 ------------------------------------------------------------------------a~tlcGSp 178 (429)
T KOG0595|consen 171 ------------------------------------------------------------------------AETLCGSP 178 (429)
T ss_pred ------------------------------------------------------------------------HHHhhCCc
Confidence 13369999
Q ss_pred ceeccccccCCCCCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCC
Q 002801 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 237 ~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
.|||||+++...|+.|+|+||+|+|||+|++ |++...........++.+ ..+......++.+.+|+...|..+|.+
T Consensus 179 lYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~ 258 (429)
T KOG0595|consen 179 LYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKD 258 (429)
T ss_pred cccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccc
Confidence 9999999999999999999999999999999 433444444444444432 233344455667779999999999999
Q ss_pred CCCHHHHhhcccccCCc
Q 002801 313 RPKMGELLQSEFLNEPR 329 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~ 329 (879)
|.+..+.+.|+++....
T Consensus 259 ~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 259 RISFEDFFDHPFLAANP 275 (429)
T ss_pred cCchHHhhhhhhcccCc
Confidence 99999999999998654
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=293.53 Aligned_cols=287 Identities=18% Similarity=0.326 Sum_probs=249.7
Q ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEecCcccC--cCc-ccccce----EEeccCCCeeEEEEeCCCCCeEEEee
Q 002801 566 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIIN--ENR-DIHYPV----VEMASRSKLSSICWNSYIKSQIASSN 637 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~-~lat~~~dg~I~iwd~~~~~~--~~~-~~~~~~----~~~~~~~~i~~l~~~~~~~~~l~s~~ 637 (879)
.|...|++++|+|-.. ++|+|+.|-+.++|++..... ... ....++ ........|++++|+.. ++.||+|.
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~-G~~LatG~ 254 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNND-GTLLATGS 254 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCC-CCeEEEee
Confidence 5899999999999655 999999999999999874111 110 111111 22234567999999984 99999999
Q ss_pred CCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCce-EEEEeeCCCCC
Q 002801 638 FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANV-CCVQFPLDSGR 716 (879)
Q Consensus 638 ~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v-~~v~~~p~~~~ 716 (879)
+||.+++|+.. |..+.++..|.++|.++.|+. .|++|++++.|+++.|||..++...+.+..++.+ ..|.|-.+ .
T Consensus 255 ~~G~~riw~~~-G~l~~tl~~HkgPI~slKWnk-~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~--~ 330 (524)
T KOG0273|consen 255 EDGEARIWNKD-GNLISTLGQHKGPIFSLKWNK-KGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQSN--D 330 (524)
T ss_pred cCcEEEEEecC-chhhhhhhccCCceEEEEEcC-CCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEecC--c
Confidence 99999999985 777888999999999999999 9999999999999999999999999888876665 77999765 5
Q ss_pred EEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCc
Q 002801 717 SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV 795 (879)
Q Consensus 717 ~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~ 795 (879)
.+++++.|+.|+++-+...+ |+.++.+|.+.|++++|+ .+.+|+|+|.|++++||+.... .+.+.+.+|..+
T Consensus 331 ~F~ts~td~~i~V~kv~~~~-P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~------~~~~~l~~Hske 403 (524)
T KOG0273|consen 331 EFATSSTDGCIHVCKVGEDR-PVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQS------NSVHDLQAHSKE 403 (524)
T ss_pred eEeecCCCceEEEEEecCCC-cceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCC------cchhhhhhhccc
Confidence 79999999999999998766 799999999999999999 9999999999999999998876 678999999999
Q ss_pred EEEEEEecCC---------CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEE
Q 002801 796 KNFVGLSVWD---------GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVA 866 (879)
Q Consensus 796 v~~v~~sp~~---------~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s 866 (879)
|+.+.|+|.| ..|++++.|++|++||+..+.++..+ ..|..+|.+|+|+|+|. ++|+
T Consensus 404 i~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f-------------~kH~~pVysvafS~~g~-ylAs 469 (524)
T KOG0273|consen 404 IYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTL-------------MKHQEPVYSVAFSPNGR-YLAS 469 (524)
T ss_pred eeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEee-------------ccCCCceEEEEecCCCc-EEEe
Confidence 9999999975 38999999999999999999988765 36889999999999999 9999
Q ss_pred EeCCCcEEEEEe
Q 002801 867 ANSSGNIKILEM 878 (879)
Q Consensus 867 ~~~Dg~I~vw~l 878 (879)
|+.||.|.||+.
T Consensus 470 Gs~dg~V~iws~ 481 (524)
T KOG0273|consen 470 GSLDGCVHIWST 481 (524)
T ss_pred cCCCCeeEeccc
Confidence 999999999973
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-36 Score=296.37 Aligned_cols=197 Identities=16% Similarity=0.169 Sum_probs=166.5
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
...||..+..+. .+.| ...+||||||++||.|+.+|++. +++++..++.|+.||+.||+|||+.+|++|||||+||
T Consensus 100 ~v~~PFlv~l~~-t~~d--~~~lymvmeyv~GGElFS~Lrk~-~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENi 175 (355)
T KOG0616|consen 100 AVSHPFLVKLYG-TFKD--NSNLYMVMEYVPGGELFSYLRKS-GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENL 175 (355)
T ss_pred hccCceeEEEEE-eecc--CCeEEEEEeccCCccHHHHHHhc-CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHe
Confidence 345666666554 3433 45689999999999999999776 6799999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
||+.+|++||+|||.|+....
T Consensus 176 LlD~~G~iKitDFGFAK~v~~----------------------------------------------------------- 196 (355)
T KOG0616|consen 176 LLDQNGHIKITDFGFAKRVSG----------------------------------------------------------- 196 (355)
T ss_pred eeccCCcEEEEeccceEEecC-----------------------------------------------------------
Confidence 999999999999999976411
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
+.-..||||-|+|||++...+|+.++|.|||||++|||++ ||+
T Consensus 197 ----------------------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~ 242 (355)
T KOG0616|consen 197 ----------------------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFY 242 (355)
T ss_pred ----------------------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCc
Confidence 1234799999999999999999999999999999999999 888
Q ss_pred CChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCC-----CCHHHHhhcccccCCc
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR-----PKMGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R-----pt~~evl~hp~~~~~~ 329 (879)
..........++......|. -.++.+++|+.++|+.|-.+| ....+|..||||++..
T Consensus 243 ~~~~~~iY~KI~~~~v~fP~--~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~ 304 (355)
T KOG0616|consen 243 DDNPIQIYEKILEGKVKFPS--YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD 304 (355)
T ss_pred CCChHHHHHHHHhCcccCCc--ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence 88776666666666554444 234889999999999999999 4568999999999754
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=318.08 Aligned_cols=259 Identities=14% Similarity=0.165 Sum_probs=175.9
Q ss_pred cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 21 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.+.|.||+++.- .+.+.+|..|+ .+.| ...+||||||++||++..+|.+. +.|++.+++.|+.+++.|++.+|.
T Consensus 186 ~hV~aERdiL~~--~ds~~vVKLyY-sFQD--~~~LYLiMEylPGGD~mTLL~~~-~~L~e~~arfYiaE~vlAI~~iH~ 259 (550)
T KOG0605|consen 186 EHVRAERDILAE--VDSPWVVKLYY-SFQD--KEYLYLIMEYLPGGDMMTLLMRK-DTLTEDWARFYIAETVLAIESIHQ 259 (550)
T ss_pred HHHHHHHHHhhh--cCCCcEEEEEE-EecC--CCeeEEEEEecCCccHHHHHHhc-CcCchHHHHHHHHHHHHHHHHHHH
Confidence 345677775544 67778888777 4443 45789999999999999999655 689999999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
.|+|||||||+|+||+..|++||+|||+|.-+......+-. ... + .+..........++.....
T Consensus 260 ~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~-~~~-~----------~~~~~~~~~~~~~~~~~~~---- 323 (550)
T KOG0605|consen 260 LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESY-RLD-E----------QMQINLSEAKPSDFPKFNT---- 323 (550)
T ss_pred cCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhh-cch-h----------hhhhhhccCCCcccccccc----
Confidence 99999999999999999999999999999654322111000 000 0 0000000000001100000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhc--ccccCCCCccccccccccceeccccccCCCCCccCcchhH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV--EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (879)
..+ ..+...-..+- ..+... ...+|||-|||||++.+.+|+..+|+|||
T Consensus 324 -------~~~-----------------~~~~~~~~~~w~~nrr~~a-----~StVGTPDYiAPEVll~kgY~~~cDwWSL 374 (550)
T KOG0605|consen 324 -------PRS-----------------TMSRREQLQTWKRNRRQLA-----YSTVGTPDYIAPEVLLGKGYGKECDWWSL 374 (550)
T ss_pred -------ccc-----------------hhhHHHHHHHHHhhhhhhh-----hcccCCccccchHHHhcCCCCccccHHHH
Confidence 000 00000000000 011111 23699999999999999999999999999
Q ss_pred HHHHHHhhc---CCCCChhhHhHHhhhcc---cCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCCc
Q 002801 259 GVLLFELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPR 329 (879)
Q Consensus 259 Gvil~ell~---pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~~ 329 (879)
|||+||||. ||.+... ......+.. ....|.-...++++.+||.+||. ||.+|. +++||.+||||+.+.
T Consensus 375 G~ImyEmLvGyPPF~s~tp-~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 375 GCIMYEMLVGYPPFCSETP-QETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred HHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 999999999 6655444 444443332 23345555667899999999999 999995 589999999999876
Q ss_pred Cch
Q 002801 330 DSM 332 (879)
Q Consensus 330 ~~~ 332 (879)
...
T Consensus 453 W~~ 455 (550)
T KOG0605|consen 453 WDH 455 (550)
T ss_pred cch
Confidence 543
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=287.90 Aligned_cols=310 Identities=22% Similarity=0.333 Sum_probs=254.1
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
++...||.+.++|-.+++.+..+...+ +|.+.|++|+|+||+..|+|++.|+++||||+.+...... ..+..
T Consensus 206 at~gsDgki~iyDGktge~vg~l~~~~--aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t------~~~~~ 277 (603)
T KOG0318|consen 206 ATAGSDGKIYIYDGKTGEKVGELEDSD--AHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVST------WPMGS 277 (603)
T ss_pred EEecCCccEEEEcCCCccEEEEecCCC--CccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEE------eecCC
Confidence 888889999999999999998887644 8999999999999999999999999999999987422111 11111
Q ss_pred C--CCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc
Q 002801 617 R--SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694 (879)
Q Consensus 617 ~--~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~ 694 (879)
. ...-.+-|- +..|++.+.+|++.+++......+..+.+|.+.|+++..+| ++++|.+|+.||.|.-||..++.
T Consensus 278 ~v~dqqvG~lWq---kd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~-d~~~i~SgsyDG~I~~W~~~~g~ 353 (603)
T KOG0318|consen 278 TVEDQQVGCLWQ---KDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSP-DGKTIYSGSYDGHINSWDSGSGT 353 (603)
T ss_pred chhceEEEEEEe---CCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcC-CCCEEEeeccCceEEEEecCCcc
Confidence 1 223344564 78899999999999999999999999999999999999999 89999999999999999975421
Q ss_pred eE-------------------------------EEE------------------------------------------e-
Q 002801 695 SI-------------------------------GTI------------------------------------------K- 700 (879)
Q Consensus 695 ~i-------------------------------~~~------------------------------------------~- 700 (879)
.- +.+ +
T Consensus 354 ~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~ 433 (603)
T KOG0318|consen 354 SDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQD 433 (603)
T ss_pred ccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEec
Confidence 00 000 0
Q ss_pred --------cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc-eeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEE
Q 002801 701 --------TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLK 770 (879)
Q Consensus 701 --------~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~-~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~ 770 (879)
..-...+++++|+ +..+++|+.|+.|++|.+.... .....+..|+.+|++|+|+ |+.+||++...+++.
T Consensus 434 ~~~~~~~~~~y~~s~vAv~~~-~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv 512 (603)
T KOG0318|consen 434 QTKVSSIPIGYESSAVAVSPD-GSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVV 512 (603)
T ss_pred CCcceeeccccccceEEEcCC-CCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEE
Confidence 0012567788998 8899999999999999998754 4455677899999999999 999999999999999
Q ss_pred EEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002801 771 LWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 771 lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
+||+.+... ......-|+..|++|+|+|++.++||||.|-.|.||+++.+.....++ ..|...
T Consensus 513 ~yd~~s~~~-----~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~ik------------nAH~~g 575 (603)
T KOG0318|consen 513 LYDVASREV-----KTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIK------------NAHLGG 575 (603)
T ss_pred EEEcccCce-----ecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEec------------cccccC
Confidence 999998732 223344599999999999999999999999999999998765443332 567777
Q ss_pred EEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 851 ISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
|+.|.|-.+. +|+++|.|..||+|.+
T Consensus 576 Vn~v~wlde~--tvvSsG~Da~iK~W~v 601 (603)
T KOG0318|consen 576 VNSVAWLDES--TVVSSGQDANIKVWNV 601 (603)
T ss_pred ceeEEEecCc--eEEeccCcceeEEecc
Confidence 9999997655 5999999999999986
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=313.98 Aligned_cols=236 Identities=18% Similarity=0.195 Sum_probs=184.3
Q ss_pred ccccccccccccCC--CCCccc-cc-ccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCC
Q 002801 4 RLLRGERFGVRGDD--SNDFEL-RK-HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (879)
Q Consensus 4 ~~~~~~~~~~~~~~--~~~~~~-r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l 79 (879)
++..|+.++++... ....+| +. .|++..+.+.+|+|++.+-+ ...+.....+|||.||| .-+|.-++..+.-.|
T Consensus 138 ~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~e-ivt~~~~~siYlVFeYM-dhDL~GLl~~p~vkf 215 (560)
T KOG0600|consen 138 DLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEE-IVTSKLSGSIYLVFEYM-DHDLSGLLSSPGVKF 215 (560)
T ss_pred ecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceee-EEEecCCceEEEEEecc-cchhhhhhcCCCccc
Confidence 45667777775432 223444 22 36777788899999998777 44555566899999999 558999998877789
Q ss_pred ChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchh
Q 002801 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 80 ~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
++.++++|++||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+.+......
T Consensus 216 t~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~--------------------- 274 (560)
T KOG0600|consen 216 TEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA--------------------- 274 (560)
T ss_pred ChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc---------------------
Confidence 99999999999999999999999999999999999999999999999999875332111
Q ss_pred hhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccccccee
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
..|..+-|.||+
T Consensus 275 --------------------------------------------------------------------~~T~rVvTLWYR 286 (560)
T KOG0600|consen 275 --------------------------------------------------------------------PYTSRVVTLWYR 286 (560)
T ss_pred --------------------------------------------------------------------ccccceEEeecc
Confidence 125567899999
Q ss_pred ccccccCCC-CCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhcc---c---------CCC----------------
Q 002801 240 SPEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRH---R---------VLP---------------- 288 (879)
Q Consensus 240 aPE~~~~~~-~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~---~---------~~~---------------- 288 (879)
|||++.|.. |+.++|+||.||||.||+. |.+.+......+..+-+ . .+|
T Consensus 287 pPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~ 366 (560)
T KOG0600|consen 287 PPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLR 366 (560)
T ss_pred ChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHH
Confidence 999999976 9999999999999999999 77666555544433321 1 011
Q ss_pred chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 289 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
..+...++.+.+|+..||..||.+|.||.++|+|+||.....
T Consensus 367 E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~ 408 (560)
T KOG0600|consen 367 ETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPL 408 (560)
T ss_pred HHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCC
Confidence 112334566789999999999999999999999999965443
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=284.28 Aligned_cols=198 Identities=20% Similarity=0.212 Sum_probs=160.0
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
...||+++.....+. .....|||.|+++|++|..-|-+. ..+++..+-++++||+++|+|+|.+||||||+||.|+
T Consensus 66 ~LqHP~IvrL~~ti~---~~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nl 141 (355)
T KOG0033|consen 66 KLQHPNIVRLHDSIQ---EESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENL 141 (355)
T ss_pred hcCCCcEeehhhhhc---ccceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhhe
Confidence 356666666555222 233579999999999998766332 4579999999999999999999999999999999999
Q ss_pred eecc---CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 114 VMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 114 ll~~---~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
||.. ..-+|++|||+|.+.+....
T Consensus 142 lLASK~~~A~vKL~~FGvAi~l~~g~~----------------------------------------------------- 168 (355)
T KOG0033|consen 142 LLASKAKGAAVKLADFGLAIEVNDGEA----------------------------------------------------- 168 (355)
T ss_pred eeeeccCCCceeecccceEEEeCCccc-----------------------------------------------------
Confidence 9953 34589999999987641111
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+|||.|||||++...+|+.++|||+.|||||-||.
T Consensus 169 --------------------------------------~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~ 210 (355)
T KOG0033|consen 169 --------------------------------------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 210 (355)
T ss_pred --------------------------------------cccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCC
Confidence 123589999999999999999999999999999999998
Q ss_pred CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||...... +....+..+ ..+|.+...++.+++|+++||..||++|+|+.|+|.|||+.+
T Consensus 211 PF~~~~~~-rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 211 PFWDEDQH-RLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred CCCCccHH-HHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 77654444 444444433 345688899999999999999999999999999999999975
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=317.44 Aligned_cols=223 Identities=19% Similarity=0.219 Sum_probs=180.0
Q ss_pred cccccc-cccccCCCC------CcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CC
Q 002801 5 LLRGER-FGVRGDDSN------DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PK 76 (879)
Q Consensus 5 ~~~~~~-~~~~~~~~~------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~ 76 (879)
.++|.. ++++--... ...|+.|.. .+...+|+|+|.+++ +|.++.. ...|||||+++|+|.++|.+ ..
T Consensus 61 ~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~--il~~l~HpNIV~f~G-~~~~~~~-~~~iVtEy~~~GsL~~~l~~~~~ 136 (362)
T KOG0192|consen 61 KWRGTDVVAVKIISDPDFDDESRKAFRREAS--LLSRLRHPNIVQFYG-ACTSPPG-SLCIVTEYMPGGSLSVLLHKKRK 136 (362)
T ss_pred EeCCceeEEEEEecchhcChHHHHHHHHHHH--HHHhCCCCCeeeEEE-EEcCCCC-ceEEEEEeCCCCcHHHHHhhccc
Confidence 456777 666533221 124555544 455689999999666 8876543 57899999999999999966 46
Q ss_pred CCCChhHHHHHHHHHHHHHHhhhhcC-cccccCCCcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCC
Q 002801 77 RSVDVYECLHIFRQIVEIVYAAHSQG-IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 154 (879)
Q Consensus 77 ~~l~~~~~~~i~~qi~~~l~~lHs~g-ivHrDlKP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (879)
+.+++..++.++.||++||+|||+++ ||||||||+|||++..+ ++||+|||+++......
T Consensus 137 ~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~------------------ 198 (362)
T KOG0192|consen 137 RKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK------------------ 198 (362)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc------------------
Confidence 78999999999999999999999999 99999999999999997 99999999997631110
Q ss_pred CcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccc
Q 002801 155 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 234 (879)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~g 234 (879)
...+...|
T Consensus 199 ------------------------------------------------------------------------~~~~~~~G 206 (362)
T KOG0192|consen 199 ------------------------------------------------------------------------TSMTSVAG 206 (362)
T ss_pred ------------------------------------------------------------------------ccccCCCC
Confidence 01133589
Q ss_pred ccceecccccc--CCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCC
Q 002801 235 TNWYASPEELA--GAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPE 309 (879)
Q Consensus 235 t~~Y~aPE~~~--~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 309 (879)
|+.|||||++. ...|+.++|||||||+||||+| ||..................|+.+..+++.+..|+.+||+.|
T Consensus 207 T~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~d 286 (362)
T KOG0192|consen 207 TYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVD 286 (362)
T ss_pred CccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCC
Confidence 99999999999 5589999999999999999999 998877744555555566677766678899999999999999
Q ss_pred CCCCCCHHHHhh
Q 002801 310 PSGRPKMGELLQ 321 (879)
Q Consensus 310 P~~Rpt~~evl~ 321 (879)
|..||++.+++.
T Consensus 287 p~~RP~f~ei~~ 298 (362)
T KOG0192|consen 287 PSRRPSFLEIVS 298 (362)
T ss_pred CCcCCCHHHHHH
Confidence 999999998865
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=300.47 Aligned_cols=272 Identities=15% Similarity=0.134 Sum_probs=189.0
Q ss_pred ccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhh-cCCCCCCChhHHHHHHHHHHHHHHhhhhcC
Q 002801 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 24 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l-~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
|.+.+...|+..+||=...+|. .. +.....+++||||.||+|..++ +++++.+++..++.|+.+|+.||+|||-.|
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa-~f--et~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlG 199 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYA-SF--ETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLG 199 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhh-ee--eccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhc
Confidence 4556666677889988888777 33 3445679999999999999988 455678999999999999999999999999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCC-CcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD-SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||.|||||+||||-++|++.|+||-++...... ..-...+.. .....+++.. ....-|.+....
T Consensus 200 ivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~-~~~~~~~~~~----------~~~s~f~~r~~~---- 264 (459)
T KOG0610|consen 200 IVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPR-SSGSQPSCRS----------RQPSCFSPRCLS---- 264 (459)
T ss_pred eeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCC-CCCCCccccc----------ccccccccchhc----
Confidence 999999999999999999999999998775221 000000000 0000000000 000000000000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
....... .. .... +...+... -+...+...++||-.|.|||++.|..-+.++|+|+|||+
T Consensus 265 ~~~~~~k-~~---------------~~~~-~~~p~~~a---ep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIf 324 (459)
T KOG0610|consen 265 SSKKRKK-KD---------------ESAS-RSLPELVA---EPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIF 324 (459)
T ss_pred ccccccc-cc---------------cccc-ccchhhhc---CCCCccccccccccccccceeeecCCCCchhhHHHHHHH
Confidence 0000000 00 0000 00000000 001123456899999999999999999999999999999
Q ss_pred HHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC----HHHHhhcccccCCcCchH
Q 002801 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRDSME 333 (879)
Q Consensus 262 l~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~evl~hp~~~~~~~~~~ 333 (879)
|||||. ||.+..........+.+....|.....+..+++||+++|.+||.+|.. +.||.+||||.+++..+.
T Consensus 325 lYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 325 LYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred HHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 999998 998888877777777776665665577788999999999999999988 999999999999877644
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-32 Score=293.78 Aligned_cols=321 Identities=19% Similarity=0.345 Sum_probs=275.2
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCC-CcEEEEecCcccCcCcccccceE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECDAIINENRDIHYPVV 612 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~d-g~I~iwd~~~~~~~~~~~~~~~~ 612 (879)
.-++++|..|...++.+..+.++..+.-++ ..|..++|+..|+.||.|+.. |.+-||++++. .+-..
T Consensus 278 ~~lvvgFssG~f~LyelP~f~lih~LSis~-----~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsE-------sYVlK 345 (893)
T KOG0291|consen 278 NLLVVGFSSGEFGLYELPDFNLIHSLSISD-----QKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSE-------SYVLK 345 (893)
T ss_pred eEEEEEecCCeeEEEecCCceEEEEeeccc-----ceeeEEEecccCCEEEEcCCccceEEEEEeecc-------ceeee
Confidence 345899999999999999999998887544 589999999999999998765 89999999862 22233
Q ss_pred EeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 002801 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 613 ~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~ 692 (879)
..+|...++|++++| +++.||+|+.||.|+|||...+-|+.+|.+|+..|+.+.|+. .++.+++.|-||+|+.||+..
T Consensus 346 QQgH~~~i~~l~YSp-Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~-~g~~llssSLDGtVRAwDlkR 423 (893)
T KOG0291|consen 346 QQGHSDRITSLAYSP-DGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTVRAWDLKR 423 (893)
T ss_pred ccccccceeeEEECC-CCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEe-cCCEEEEeecCCeEEeeeecc
Confidence 446888999999999 599999999999999999999999999999999999999998 999999999999999999999
Q ss_pred CceEEEEecCCc--eEEEEeeCCCCCEEEEEeCCC-eEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCc
Q 002801 693 GVSIGTIKTKAN--VCCVQFPLDSGRSLAFGSADH-RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNT 768 (879)
Q Consensus 693 ~~~i~~~~~~~~--v~~v~~~p~~~~~l~tgs~d~-~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~ 768 (879)
....+++..+.+ ..||+.+|. |.+++.|+.|. .|++|++.+++. +-.+.||.++|.++.|+ .+..|+|+|.|++
T Consensus 424 YrNfRTft~P~p~QfscvavD~s-GelV~AG~~d~F~IfvWS~qTGql-lDiLsGHEgPVs~l~f~~~~~~LaS~SWDkT 501 (893)
T KOG0291|consen 424 YRNFRTFTSPEPIQFSCVAVDPS-GELVCAGAQDSFEIFVWSVQTGQL-LDILSGHEGPVSGLSFSPDGSLLASGSWDKT 501 (893)
T ss_pred cceeeeecCCCceeeeEEEEcCC-CCEEEeeccceEEEEEEEeecCee-eehhcCCCCcceeeEEccccCeEEeccccce
Confidence 999999987655 789999998 88888888887 899999999995 88999999999999999 9999999999999
Q ss_pred EEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCC----C
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPE----T 844 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~----~ 844 (879)
||+||+-... ..+.++. +...+..++|+|+|+-||.+.-||.|.+||.....++.++..-. +...|.. +
T Consensus 502 VRiW~if~s~-----~~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~q~~~Idgrk-D~~~gR~~~D~~ 574 (893)
T KOG0291|consen 502 VRIWDIFSSS-----GTVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAVQVGSIDGRK-DLSGGRKETDRI 574 (893)
T ss_pred EEEEEeeccC-----ceeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhceeeccccchh-hcccccccccee
Confidence 9999997652 2344444 56779999999999999999999999999999888776654221 1111111 1
Q ss_pred ----CCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 845 ----DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 845 ----~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
...+.+.+.+|+++||. .+++||....|++|++
T Consensus 575 ta~~sa~~K~Ftti~ySaDG~-~IlAgG~sn~iCiY~v 611 (893)
T KOG0291|consen 575 TAENSAKGKTFTTICYSADGK-CILAGGESNSICIYDV 611 (893)
T ss_pred ehhhcccCCceEEEEEcCCCC-EEEecCCcccEEEEEC
Confidence 22357899999999999 9999999999999986
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-33 Score=269.02 Aligned_cols=282 Identities=19% Similarity=0.341 Sum_probs=239.6
Q ss_pred EEEEEcC--CCCEEEEEe-------CCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 572 CSLSFDR--DGELFAAAG-------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 572 ~~l~fsp--dg~~lat~~-------~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.++.||| +++ ||.+. ..|++.|-++... ........+.....+..++|+++..+.+++++.||++
T Consensus 12 ysvqfSPf~~nr-LavAt~q~yGl~G~G~L~ile~~~~-----~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSL 85 (311)
T KOG0277|consen 12 YSVQFSPFVENR-LAVATAQHYGLAGNGRLFILEVTDP-----KGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSL 85 (311)
T ss_pred ceeEecccccch-hheeehhhcccccCceEEEEecCCC-----CCeEEEEeeecccceeEeeecCCCcceEEEEecCceE
Confidence 4688998 444 33332 3578888887521 1122334455677899999999999999999999999
Q ss_pred EEEEcCC-CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC-ceEEEEeeCCCCCEEEE
Q 002801 643 QVWDVSR-SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 643 ~vwd~~~-~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~-~v~~v~~~p~~~~~l~t 720 (879)
++||... ..++..+++|...|.+++|++.....++++|-|++||+||..-++.++++..+. .|..++|+|..++++++
T Consensus 86 rl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas 165 (311)
T KOG0277|consen 86 RLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFAS 165 (311)
T ss_pred EEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEE
Confidence 9999643 467889999999999999999888999999999999999999999999998654 49999999999999999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 798 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~ 798 (879)
+|.|+++++||+|...+.+ .+..|...+.++.|+ +...|+||+.|+.|+.||+++. ..++..+.+|.-.|..
T Consensus 166 ~Sgd~~l~lwdvr~~gk~~-~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~-----r~pl~eL~gh~~AVRk 239 (311)
T KOG0277|consen 166 ASGDGTLRLWDVRSPGKFM-SIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNL-----RTPLFELNGHGLAVRK 239 (311)
T ss_pred ccCCceEEEEEecCCCcee-EEEeccceeEeecccccCCcEEEecCCCceEEEEehhhc-----cccceeecCCceEEEE
Confidence 9999999999999987644 488999999999998 8999999999999999999997 4789999999999999
Q ss_pred EEEecCC-CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 799 VGLSVWD-GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 799 v~~sp~~-~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|.|||.. ..||++|.|-+++|||...+.... ...+.|++||..+.|++-.++.+|+++.|+.++||+
T Consensus 240 vk~Sph~~~lLaSasYDmT~riw~~~~~ds~~------------e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 240 VKFSPHHASLLASASYDMTVRIWDPERQDSAI------------ETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred EecCcchhhHhhhccccceEEecccccchhhh------------hhhhccceEEeccccccccCceeeecccccceeeec
Confidence 9999985 489999999999999987443221 112678999999999998766999999999999997
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=295.73 Aligned_cols=214 Identities=17% Similarity=0.204 Sum_probs=167.0
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
++-.+.+..|+|+|..-. +.....-.+.|||||||+ -+|..+|..-..+|...+++.++.|++.||.|||...|+|||
T Consensus 125 EIniLl~~~H~NIV~vkE-VVvG~~~d~iy~VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRD 202 (419)
T KOG0663|consen 125 EINILLKARHPNIVEVKE-VVVGSNMDKIYIVMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRD 202 (419)
T ss_pred HHHHHHhcCCCCeeeeEE-EEeccccceeeeeHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecc
Confidence 333455666888876555 333334456999999994 589999977667899999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|+|++..|.+||+|||+|+.++.+-
T Consensus 203 LK~SNLLm~~~G~lKiaDFGLAR~ygsp~--------------------------------------------------- 231 (419)
T KOG0663|consen 203 LKTSNLLLSHKGILKIADFGLAREYGSPL--------------------------------------------------- 231 (419)
T ss_pred cchhheeeccCCcEEecccchhhhhcCCc---------------------------------------------------
Confidence 99999999999999999999999876551
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell 266 (879)
+..|..+-|.||+|||.+.|.+ |+++.|+||+|||+.||+
T Consensus 232 ---------------------------------------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l 272 (419)
T KOG0663|consen 232 ---------------------------------------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELL 272 (419)
T ss_pred ---------------------------------------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHH
Confidence 1235568899999999999977 999999999999999999
Q ss_pred c--CCCCChhhHhHHhhhcc-------cC--------------CCc--------hhhc--cChhhHHHHHHhcCCCCCCC
Q 002801 267 C--PFSTGEEKTRTMSSLRH-------RV--------------LPP--------QLLL--KFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 267 ~--pf~~~~~~~~~~~~~~~-------~~--------------~~~--------~~~~--~~~~~~~li~~~L~~dP~~R 313 (879)
. |.+++.........+-. .+ +++ .+.. .+....+|+..+|..||.+|
T Consensus 273 ~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR 352 (419)
T KOG0663|consen 273 TQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKR 352 (419)
T ss_pred hcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccc
Confidence 9 77666443333322210 00 000 1111 23556799999999999999
Q ss_pred CCHHHHhhcccccCCcCchH
Q 002801 314 PKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 314 pt~~evl~hp~~~~~~~~~~ 333 (879)
.||+|.|+|+||.+.+.+..
T Consensus 353 ~tA~~~L~h~~F~e~P~p~~ 372 (419)
T KOG0663|consen 353 ITAEDGLKHEYFRETPLPID 372 (419)
T ss_pred ccHHHhhcccccccCCCCCC
Confidence 99999999999998655444
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=281.85 Aligned_cols=236 Identities=15% Similarity=0.166 Sum_probs=182.5
Q ss_pred cccccccccccCCCCC--ccc--ccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCC
Q 002801 5 LLRGERFGVRGDDSND--FEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (879)
Q Consensus 5 ~~~~~~~~~~~~~~~~--~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~ 80 (879)
..+|++++++.-.-.. .++ -..|+...+....|+|+++..+ ++.. ...+-||.||+ ..+|...++.....++
T Consensus 24 ~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~~--~~~l~lVfEfm-~tdLe~vIkd~~i~l~ 99 (318)
T KOG0659|consen 24 TETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELID-VFPH--KSNLSLVFEFM-PTDLEVVIKDKNIILS 99 (318)
T ss_pred cCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhh-hccC--CCceEEEEEec-cccHHHHhcccccccC
Confidence 4567888876442221 111 1124444445566888888777 4433 34578999999 6799999988888999
Q ss_pred hhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhh
Q 002801 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (879)
Q Consensus 81 ~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (879)
..+++.++.++++||+|||++.|+||||||.|+||+++|++|++|||+|+.++++...
T Consensus 100 pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~---------------------- 157 (318)
T KOG0659|consen 100 PADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI---------------------- 157 (318)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc----------------------
Confidence 9999999999999999999999999999999999999999999999999987655221
Q ss_pred hhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceec
Q 002801 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (879)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (879)
.+..+-|.||+|
T Consensus 158 --------------------------------------------------------------------~~~~V~TRWYRA 169 (318)
T KOG0659|consen 158 --------------------------------------------------------------------QTHQVVTRWYRA 169 (318)
T ss_pred --------------------------------------------------------------------cccceeeeeccC
Confidence 122366999999
Q ss_pred cccccCCC-CCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhccc----------------------CCCc-----h
Q 002801 241 PEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR----------------------VLPP-----Q 290 (879)
Q Consensus 241 PE~~~~~~-~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~~----------------------~~~~-----~ 290 (879)
||.+.|.. |+..+||||.|||+.||+- ||+++....+.+..+-.. ..|. .
T Consensus 170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~l 249 (318)
T KOG0659|consen 170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNL 249 (318)
T ss_pred hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccc
Confidence 99999976 9999999999999999998 999887776665544211 0111 2
Q ss_pred hhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchHH
Q 002801 291 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 334 (879)
Q Consensus 291 ~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~e 334 (879)
+...+.++.+|+.+||..||.+|+++.|+|+|+||.+.+.+...
T Consensus 250 f~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~ 293 (318)
T KOG0659|consen 250 FPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPP 293 (318)
T ss_pred cccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCCh
Confidence 23345667899999999999999999999999999976655443
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=283.28 Aligned_cols=284 Identities=27% Similarity=0.430 Sum_probs=248.1
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.+.+|.+.|++++|+|++++|++++.||.|++|++.... .......|...+.++.|++. ++.|++++.||.|
T Consensus 4 ~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~-------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i 75 (289)
T cd00200 4 TLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE-------LLRTLKGHTGPVRDVAASAD-GTYLASGSSDKTI 75 (289)
T ss_pred HhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC-------cEEEEecCCcceeEEEECCC-CCEEEEEcCCCeE
Confidence 355899999999999999999999999999999987532 11222346778889999985 6899999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEE
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tg 721 (879)
.+||+.+++.+..+..|...|.++.|++ ++.++++++.|+.|.+||+++++.+..+. +...+.+++|+|+ +.+++++
T Consensus 76 ~i~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~ 153 (289)
T cd00200 76 RLWDLETGECVRTLTGHTSYVSSVAFSP-DGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPD-GTFVASS 153 (289)
T ss_pred EEEEcCcccceEEEeccCCcEEEEEEcC-CCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCc-CCEEEEE
Confidence 9999998888888889999999999999 78889988889999999999888888887 4567999999998 7888888
Q ss_pred eCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEE
Q 002801 722 SADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 722 s~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
+.|+.|++||+++.+ ++..+..|...|.++.|+ ++..+++++.|+.|++||++.. ..+..+..|...+.++.
T Consensus 154 ~~~~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~------~~~~~~~~~~~~i~~~~ 226 (289)
T cd00200 154 SQDGTIKLWDLRTGK-CVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTG------KCLGTLRGHENGVNSVA 226 (289)
T ss_pred cCCCcEEEEEccccc-cceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCC------ceecchhhcCCceEEEE
Confidence 889999999999777 477788899999999999 8889999999999999999876 56777778888999999
Q ss_pred EecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 801 LSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 801 ~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|+|++.++++++.|+.|++|++..++++..+. .|...|.+++|+|++. .|++++.||.|++|+
T Consensus 227 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~-~l~~~~~d~~i~iw~ 289 (289)
T cd00200 227 FSPDGYLLASGSEDGTIRVWDLRTGECVQTLS-------------GHTNSVTSLAWSPDGK-RLASGSADGTIRIWD 289 (289)
T ss_pred EcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc-------------ccCCcEEEEEECCCCC-EEEEecCCCeEEecC
Confidence 99998899999989999999998766665443 4566799999999999 999999999999996
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=292.05 Aligned_cols=281 Identities=20% Similarity=0.300 Sum_probs=247.8
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe-ccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
+..++..|.+|.|+|....++++-.+|.|.||+.++... +..+ -+.-+|.+..|-.. ++++++|+.|..|
T Consensus 9 ~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtm--------VksfeV~~~PvRa~kfiaR-knWiv~GsDD~~I 79 (794)
T KOG0276|consen 9 FQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTM--------VKSFEVSEVPVRAAKFIAR-KNWIVTGSDDMQI 79 (794)
T ss_pred hhccCCceeeeecCCCCceEEEeeecCeeEEEeccccee--------eeeeeecccchhhheeeec-cceEEEecCCceE
Confidence 346889999999999999999999999999999987321 1111 24567888888875 9999999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEecCCc-eEEEEeeCCCCCEEEE
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG-VSIGTIKTKAN-VCCVQFPLDSGRSLAF 720 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~-~~i~~~~~~~~-v~~v~~~p~~~~~l~t 720 (879)
+||+.+|++.+..|..|..-|.+++.+| +.-+++|+|+|-+|++||...+ .+.+++..|.. |.+|+|+|.+.+.+|+
T Consensus 80 rVfnynt~ekV~~FeAH~DyIR~iavHP-t~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS 158 (794)
T KOG0276|consen 80 RVFNYNTGEKVKTFEAHSDYIRSIAVHP-TLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFAS 158 (794)
T ss_pred EEEecccceeeEEeeccccceeeeeecC-CCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceee
Confidence 9999999999999999999999999999 6679999999999999999865 67788887665 9999999999999999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc---CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV---DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN 797 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs---~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~ 797 (879)
++-|++|++|.+.++. |..++.+|.+.|+||.|- |..+|+||+.|.+|+|||..+. .|++++.||++.|+
T Consensus 159 ~sLDrTVKVWslgs~~-~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk------~CV~TLeGHt~Nvs 231 (794)
T KOG0276|consen 159 ASLDRTVKVWSLGSPH-PNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTK------SCVQTLEGHTNNVS 231 (794)
T ss_pred eeccccEEEEEcCCCC-CceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchH------HHHHHhhcccccce
Confidence 9999999999999887 689999999999999997 4459999999999999999997 89999999999999
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEE
Q 002801 798 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875 (879)
Q Consensus 798 ~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~v 875 (879)
++.|+|.=..|+|||+||+|+||+-.+-+...++.++ .+.|++|+-.+.+. .++.|...|.|-|
T Consensus 232 ~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~g-------------leRvW~I~~~k~~~-~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 232 FVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYG-------------LERVWCIAAHKGDG-KIAVGFDEGSVTV 295 (794)
T ss_pred EEEecCCCcEEEEecCCccEEEecCcceehhhhhhcC-------------CceEEEEeecCCCC-eEEEeccCCcEEE
Confidence 9999999999999999999999998877666666543 34599999888888 7888887787654
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=288.63 Aligned_cols=274 Identities=21% Similarity=0.326 Sum_probs=237.0
Q ss_pred CCCCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccc
Q 002801 531 GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYP 610 (879)
Q Consensus 531 ~~~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~ 610 (879)
+++.++++|+..|...+|+...+... .-+..|.++|+++.|+++|.++++|..+|.||+|+.+-.....
T Consensus 106 PeGRRLltgs~SGEFtLWNg~~fnFE-----tilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~------ 174 (464)
T KOG0284|consen 106 PEGRRLLTGSQSGEFTLWNGTSFNFE-----TILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKI------ 174 (464)
T ss_pred CCCceeEeecccccEEEecCceeeHH-----HHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHH------
Confidence 34677899999999999997543322 2245899999999999999999999999999999876421111
Q ss_pred eEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeC
Q 002801 611 VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (879)
Q Consensus 611 ~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~ 690 (879)
..-.|...|.+++|+|. .+.+++++.||+|+|||....+.-..+.+|.-.|.+++|+| ...++|+||.|..|++||.
T Consensus 175 -~~ahh~eaIRdlafSpn-DskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP-~kgLiasgskDnlVKlWDp 251 (464)
T KOG0284|consen 175 -IQAHHAEAIRDLAFSPN-DSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHP-TKGLIASGSKDNLVKLWDP 251 (464)
T ss_pred -hhHhhhhhhheeccCCC-CceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCC-ccceeEEccCCceeEeecC
Confidence 11235689999999994 88999999999999999988887778899999999999999 7889999999999999999
Q ss_pred CCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCC
Q 002801 691 NQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDN 767 (879)
Q Consensus 691 ~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~ 767 (879)
+++.++.++.. +..|..+.|+|+ +++|+++|.|..+++||+|+.+. +.++++|++-|+++.|+ ...+|.+|+.||
T Consensus 252 rSg~cl~tlh~HKntVl~~~f~~n-~N~Llt~skD~~~kv~DiR~mkE-l~~~r~Hkkdv~~~~WhP~~~~lftsgg~Dg 329 (464)
T KOG0284|consen 252 RSGSCLATLHGHKNTVLAVKFNPN-GNWLLTGSKDQSCKVFDIRTMKE-LFTYRGHKKDVTSLTWHPLNESLFTSGGSDG 329 (464)
T ss_pred CCcchhhhhhhccceEEEEEEcCC-CCeeEEccCCceEEEEehhHhHH-HHHhhcchhhheeeccccccccceeeccCCC
Confidence 99999999885 455999999999 79999999999999999997774 88999999999999998 889999999999
Q ss_pred cEEEEecCCCcccccCCceEEE-eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCC
Q 002801 768 TLKLWDLSMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPM 826 (879)
Q Consensus 768 ~i~lwd~~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~ 826 (879)
.|..|.+... .++..+ .+|...|++++|+|-|..||+|+.|.++++|....+.
T Consensus 330 svvh~~v~~~------~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~ 383 (464)
T KOG0284|consen 330 SVVHWVVGLE------EPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPG 383 (464)
T ss_pred ceEEEecccc------ccccCCCcccccceeeeeccccceeEeecCCCcceeeeccCCCC
Confidence 9999999843 334333 4799999999999999999999999999999876543
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=278.23 Aligned_cols=266 Identities=21% Similarity=0.381 Sum_probs=240.6
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
++++.|++|++||+.++.+.+.++ ||.+.|.+|+|+..|+++|+|+.|-.+++||++.. ........+|
T Consensus 124 ~~as~d~tikv~D~~tg~~e~~Lr-----GHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~------~~c~ks~~gh 192 (406)
T KOG0295|consen 124 VSASEDATIKVFDTETGELERSLR-----GHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF------FRCIKSLIGH 192 (406)
T ss_pred EEecCCceEEEEEccchhhhhhhh-----ccccceeEEEEecCccEEEecCCccchhheeHHHH------HHHHHHhcCc
Confidence 566679999999999998865554 99999999999999999999999999999998762 1122334568
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i 696 (879)
...|++++|-|. +++|+|++.|.+|+.|++.++-++.+|.+|...|..++.+. ||.++|+|+.|.+|++|-+.++++.
T Consensus 193 ~h~vS~V~f~P~-gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~-DGti~As~s~dqtl~vW~~~t~~~k 270 (406)
T KOG0295|consen 193 EHGVSSVFFLPL-GDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQ-DGTIIASCSNDQTLRVWVVATKQCK 270 (406)
T ss_pred ccceeeEEEEec-CCeeeecccccceeEEecccceeEEeccCchHhEEEEEecC-CeeEEEecCCCceEEEEEeccchhh
Confidence 889999999996 89999999999999999999999999999999999999998 9999999999999999999999877
Q ss_pred EEEe-cCCceEEEEeeCC--------------CCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEE
Q 002801 697 GTIK-TKANVCCVQFPLD--------------SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTL 760 (879)
Q Consensus 697 ~~~~-~~~~v~~v~~~p~--------------~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l 760 (879)
..+. +.-.|.|++|-|. ++.++++++.|++|++||+.++.. +.++.+|...|..++|+ .|++|
T Consensus 271 ~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~c-L~tL~ghdnwVr~~af~p~Gkyi 349 (406)
T KOG0295|consen 271 AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMC-LFTLVGHDNWVRGVAFSPGGKYI 349 (406)
T ss_pred hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeE-EEEEecccceeeeeEEcCCCeEE
Confidence 7666 4567899998775 235899999999999999999985 99999999999999999 99999
Q ss_pred EEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 761 VSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 761 ~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
+|+..|++|++||+++. +|++++..|..-|++++|+.+..|++|||-|..+++|.-
T Consensus 350 ~ScaDDktlrvwdl~~~------~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 350 LSCADDKTLRVWDLKNL------QCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred EEEecCCcEEEEEeccc------eeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 99999999999999997 889999999999999999999999999999999999963
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=304.77 Aligned_cols=205 Identities=16% Similarity=0.145 Sum_probs=169.0
Q ss_pred cccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
+|.++.+|.+..|+|++.+.+ ||.... -.+||||||..|-|.+.|+.. +++.......+.++|+.|+.|||.+.||
T Consensus 159 kETdIKHLRkLkH~NII~FkG-VCtqsP--cyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hKII 234 (904)
T KOG4721|consen 159 KETDIKHLRKLKHPNIITFKG-VCTQSP--CYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHKII 234 (904)
T ss_pred hhhhHHHHHhccCcceeeEee-eecCCc--eeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhhHh
Confidence 567888899999999998776 997543 458999999999999999665 6889999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|||||.-||||+.+..|||+|||.++.....+
T Consensus 235 HRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S------------------------------------------------ 266 (904)
T KOG4721|consen 235 HRDLKSPNILISYDDVVKISDFGTSKELSDKS------------------------------------------------ 266 (904)
T ss_pred hhccCCCceEeeccceEEeccccchHhhhhhh------------------------------------------------
Confidence 99999999999999999999999987642110
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~e 264 (879)
..-.++||..|||||++...+++.|+|||||||+|||
T Consensus 267 -------------------------------------------TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWE 303 (904)
T KOG4721|consen 267 -------------------------------------------TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWE 303 (904)
T ss_pred -------------------------------------------hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHH
Confidence 0123699999999999999999999999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
||| ||.........+..-....--|.+..++..++-|+.+||...|..||++.++|.|-=
T Consensus 304 mLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 304 MLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred HHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 999 886544322222211112223455567778899999999999999999999999853
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=302.34 Aligned_cols=214 Identities=18% Similarity=0.198 Sum_probs=175.1
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCC-CChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~-l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
+++..+....|+|+|.++. +-.|.....+|||+|||..|.+. |.... .+ +++.+++.|+++++.||+|||.|||||
T Consensus 157 ~EIailKkl~H~nVV~LiE-vLDDP~s~~~YlVley~s~G~v~-w~p~d-~~els~~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 157 REIAILKKLHHPNVVKLIE-VLDDPESDKLYLVLEYCSKGEVK-WCPPD-KPELSEQQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred HHHHHHHhcCCcCeeEEEE-eecCcccCceEEEEEeccCCccc-cCCCC-cccccHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 4445567788899999888 77788888999999999998875 44333 34 899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+|+||+.+|+|||+|||.+..+.....+ +
T Consensus 234 RDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-~--------------------------------------------- 267 (576)
T KOG0585|consen 234 RDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-G--------------------------------------------- 267 (576)
T ss_pred cccchhheEEcCCCcEEeeccceeeecccCCcc-c---------------------------------------------
Confidence 999999999999999999999998654211000 0
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----CCccCcchhHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 261 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvi 261 (879)
. -. .....+|||.|+|||.+.++. .+++.|||||||+
T Consensus 268 -----------------~----------d~------------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVT 308 (576)
T KOG0585|consen 268 -----------------S----------DD------------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVT 308 (576)
T ss_pred -----------------c----------HH------------HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhh
Confidence 0 00 011248999999999998733 4889999999999
Q ss_pred HHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 262 l~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||.|+. ||..........+++......|...+..+.+++||.+||.+||.+|++..+|..|||....
T Consensus 309 LYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 309 LYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 999998 9988877777767766666666666778999999999999999999999999999999854
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=300.61 Aligned_cols=238 Identities=24% Similarity=0.390 Sum_probs=216.7
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCC-------------------------------eEEEEeccCCCcEEE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-------------------------------QVLTEMREHERRVWS 665 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~-------------------------------~~~~~~~~h~~~v~s 665 (879)
...++|..|++. ..+||.|-.|..|++|.+... .....+.+|.++|..
T Consensus 378 ~~~v~ca~fSdd-ssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 378 YQGVTCAEFSDD-SSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred CCcceeEeecCC-cchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 456788888874 778888888999999987621 113446689999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc
Q 002801 666 IDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG 744 (879)
Q Consensus 666 v~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~ 744 (879)
+.|+| +.++|++||.|++|++|++.+..++..+..| .+|++|.|+|. |.|||+||.|++.++|...... |+..+.+
T Consensus 457 ~sFsP-d~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~-GyYFatas~D~tArLWs~d~~~-PlRifag 533 (707)
T KOG0263|consen 457 CSFSP-DRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPR-GYYFATASHDQTARLWSTDHNK-PLRIFAG 533 (707)
T ss_pred eeecc-cccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCC-ceEEEecCCCceeeeeecccCC-chhhhcc
Confidence 99999 9999999999999999999999999888854 67999999999 9999999999999999998866 7999999
Q ss_pred CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecC
Q 002801 745 HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 745 h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~ 823 (879)
|-.-|.|+.|+ +..+++|||.|.++|+||+.++ ..++.|.||.++|.+|+|||+|.|||+|++||.|.+||+.
T Consensus 534 hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G------~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~ 607 (707)
T KOG0263|consen 534 HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTG------NSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLA 607 (707)
T ss_pred cccccceEEECCcccccccCCCCceEEEEEcCCC------cEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcC
Confidence 99999999999 9999999999999999999998 6799999999999999999999999999999999999999
Q ss_pred CCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 824 FPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
.++++..+. +|.+.|.+|.|+.+|. .||+||.|.+|++||+
T Consensus 608 ~~~~v~~l~-------------~Ht~ti~SlsFS~dg~-vLasgg~DnsV~lWD~ 648 (707)
T KOG0263|consen 608 NGSLVKQLK-------------GHTGTIYSLSFSRDGN-VLASGGADNSVRLWDL 648 (707)
T ss_pred CCcchhhhh-------------cccCceeEEEEecCCC-EEEecCCCCeEEEEEc
Confidence 998887664 6788899999999999 9999999999999997
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-33 Score=290.18 Aligned_cols=290 Identities=16% Similarity=0.241 Sum_probs=244.3
Q ss_pred cccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 563 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 563 ~l~~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
.+.||...|+++.|.| .+.+|++||.|++|+||++-.. .......++|..+|.+++|+.. +..++|+++|+.
T Consensus 209 ~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------~~~lrtf~gH~k~Vrd~~~s~~-g~~fLS~sfD~~ 281 (503)
T KOG0282|consen 209 NLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------RRCLRTFKGHRKPVRDASFNNC-GTSFLSASFDRF 281 (503)
T ss_pred eccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------cceehhhhcchhhhhhhhcccc-CCeeeeeeccee
Confidence 4569999999999999 8999999999999999998751 1223345679999999999984 999999999999
Q ss_pred EEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEE
Q 002801 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~t 720 (879)
|++||++||+++..+. -...++|+.|+|.+.+.|++|+.|+.|+.||+++++.++.+..+ +.|..+.|-++ +..+++
T Consensus 282 lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~-g~rFis 359 (503)
T KOG0282|consen 282 LKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDE-GRRFIS 359 (503)
T ss_pred eeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccC-CceEee
Confidence 9999999999999885 46689999999966699999999999999999999999888764 56999999999 889999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCc--EE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV--KN 797 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~--v~ 797 (879)
.+.|++++||+.+.+-........+.....++..+ ++.+++.=+.|+.|.++.+...-. ......|.||... -.
T Consensus 360 sSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r---~nkkK~feGh~vaGys~ 436 (503)
T KOG0282|consen 360 SSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFR---LNKKKRFEGHSVAGYSC 436 (503)
T ss_pred eccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccc---cCHhhhhcceeccCcee
Confidence 99999999999988763222222233345577777 999999999999999999765422 2445678888654 34
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 798 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 798 ~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
.|.|||||.+|++|+.||.+++||..+-+.+..+ ..|.++|..+.|+|..+..+|||+.||.|++|+
T Consensus 437 ~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~l-------------kah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 437 QVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKL-------------KAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eEEEcCCCCeEEeecCCccEEEeechhhhhhhcc-------------ccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 6789999999999999999999999987766544 367889999999999776899999999999996
|
|
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=282.31 Aligned_cols=228 Identities=16% Similarity=0.221 Sum_probs=169.0
Q ss_pred cccccccccCCCCCcccccc--cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc-CCCCCCChhH
Q 002801 7 RGERFGVRGDDSNDFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYE 83 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~-~~~~~l~~~~ 83 (879)
.|++|+++-.-..... |+| ..+....|++.++++..|.-.+ ....-+.||||.++||.|+..+. +....+++.+
T Consensus 86 T~ekfALKvL~Ds~KA-RrEVeLHw~~s~h~~iV~IidVyeNs~--~~rkcLLiVmE~meGGeLfsriq~~g~~afTEre 162 (400)
T KOG0604|consen 86 TQEKFALKVLLDSPKA-RREVELHWMASGHPHIVSIIDVYENSY--QGRKCLLIVMECMEGGELFSRIQDRGDQAFTERE 162 (400)
T ss_pred chhhhHHHHHhcCHHH-HhHhhhhhhhcCCCceEEeehhhhhhc--cCceeeEeeeecccchHHHHHHHHcccccchHHH
Confidence 4666666544222222 333 3333334455555555444111 12335789999999999999994 4445799999
Q ss_pred HHHHHHHHHHHHHhhhhcCcccccCCCcceeec---cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhh
Q 002801 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (879)
+..|++||+.||.|||+.+|+||||||+|+|.. .+..+|++|||+|+.-....
T Consensus 163 a~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~------------------------ 218 (400)
T KOG0604|consen 163 ASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPG------------------------ 218 (400)
T ss_pred HHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCc------------------------
Confidence 999999999999999999999999999999996 34568999999998732110
Q ss_pred hhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceec
Q 002801 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (879)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (879)
.....+-||+|.|
T Consensus 219 -------------------------------------------------------------------~L~TPc~TPyYva 231 (400)
T KOG0604|consen 219 -------------------------------------------------------------------DLMTPCFTPYYVA 231 (400)
T ss_pred -------------------------------------------------------------------cccCCcccccccC
Confidence 0122366999999
Q ss_pred cccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhH--hHH-hhhcc---cCCCchhhccChhhHHHHHHhcCCCCC
Q 002801 241 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKT--RTM-SSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 241 PE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~--~~~-~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
||++....|+..+|+|||||++|-||| ||++..... .-| ..++. .+..|.|...+..++++|+++|.-+|.
T Consensus 232 Pevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~Pt 311 (400)
T KOG0604|consen 232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPT 311 (400)
T ss_pred HHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCch
Confidence 999988899999999999999999999 776543211 111 22222 234577888889999999999999999
Q ss_pred CCCCHHHHhhcccccCC
Q 002801 312 GRPKMGELLQSEFLNEP 328 (879)
Q Consensus 312 ~Rpt~~evl~hp~~~~~ 328 (879)
+|.|+.+++.|||++..
T Consensus 312 eRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 312 ERLTIEEVMDHPWINQY 328 (400)
T ss_pred hheeHHHhhcCchhccc
Confidence 99999999999999864
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-31 Score=300.85 Aligned_cols=284 Identities=26% Similarity=0.422 Sum_probs=246.1
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vw 645 (879)
.|...|.++.|+++|+++++++.|+.|++|+...... .... ....|...|++++|+|. +.++++++.|++|+||
T Consensus 157 ~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~--~~~~---~l~~h~~~v~~~~fs~d-~~~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 157 HECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS--NLLR---ELSGHTRGVSDVAFSPD-GSYLLSGSDDKTLRIW 230 (456)
T ss_pred cccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc--hhhc---cccccccceeeeEECCC-CcEEEEecCCceEEEe
Confidence 3478999999999999999999999999999854321 0111 11468899999999995 8899999999999999
Q ss_pred Ec-CCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeC
Q 002801 646 DV-SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 646 d~-~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~ 723 (879)
|+ ..+..++.+++|...|++++|+| .++++++|+.|++|+|||+++++++..+..+ ..|++++|+++ +++|++++.
T Consensus 231 d~~~~~~~~~~l~gH~~~v~~~~f~p-~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d-~~~l~s~s~ 308 (456)
T KOG0266|consen 231 DLKDDGRNLKTLKGHSTYVTSVAFSP-DGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPD-GNLLVSASY 308 (456)
T ss_pred eccCCCeEEEEecCCCCceEEEEecC-CCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCC-CCEEEEcCC
Confidence 99 55688999999999999999999 7899999999999999999999999999865 46999999999 899999999
Q ss_pred CCeEEEEEcCCCce-eeEEEccCCCC--EEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcE---
Q 002801 724 DHRIYYYDLRNSKI-PLCTLIGHNKT--VSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK--- 796 (879)
Q Consensus 724 d~~I~iwDl~~~~~-~~~~~~~h~~~--V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v--- 796 (879)
|+.|++||+.++.. ++..+.++... ++++.|+ ++.+|++++.|+.+++||+... .++..+.+|.+.+
T Consensus 309 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~------~~~~~~~~~~~~~~~~ 382 (456)
T KOG0266|consen 309 DGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSG------KSVGTYTGHSNLVRCI 382 (456)
T ss_pred CccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCC------cceeeecccCCcceeE
Confidence 99999999999884 25566666555 9999999 9999999999999999999987 7788899998854
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCC-CCCEEEEEEeCCCCcEEEEEe--CCCcE
Q 002801 797 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDA-AQFISSVCWRGQSSNTLVAAN--SSGNI 873 (879)
Q Consensus 797 ~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~V~~v~~~p~~~~~l~s~~--~Dg~I 873 (879)
.+...++.+.++++|+.|+.|++|++.++..+..+ .+| ...|..++|+|... ++++++ .|+.|
T Consensus 383 ~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l-------------~~h~~~~~~~~~~~~~~~-~~~s~s~~~d~~~ 448 (456)
T KOG0266|consen 383 FSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRL-------------EGHSKAAVSDLSSHPTEN-LIASSSFEGDGLI 448 (456)
T ss_pred ecccccCCCCeEEEEeCCceEEEEeCCccchhhhh-------------cCCCCCceeccccCCCcC-eeeecCcCCCceE
Confidence 33455778999999999999999999986655544 456 77899999999999 899888 78999
Q ss_pred EEEE
Q 002801 874 KILE 877 (879)
Q Consensus 874 ~vw~ 877 (879)
++|.
T Consensus 449 ~~w~ 452 (456)
T KOG0266|consen 449 RLWK 452 (456)
T ss_pred EEec
Confidence 9996
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=279.05 Aligned_cols=197 Identities=19% Similarity=0.190 Sum_probs=162.2
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
..||+++..-+ +++ ...-+|+|.|.|+.|.|+++|... -.+++.+.+.|++|+++|+.|||.++||||||||+|||
T Consensus 80 ~GHP~II~l~D-~ye--s~sF~FlVFdl~prGELFDyLts~-VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENIL 155 (411)
T KOG0599|consen 80 MGHPYIIDLQD-VYE--SDAFVFLVFDLMPRGELFDYLTSK-VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENIL 155 (411)
T ss_pred cCCCcEEEeee-ecc--CcchhhhhhhhcccchHHHHhhhh-eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhhee
Confidence 56777776655 333 445689999999999999999554 57899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++++.++||+|||.+..+...
T Consensus 156 lddn~~i~isDFGFa~~l~~G----------------------------------------------------------- 176 (411)
T KOG0599|consen 156 LDDNMNIKISDFGFACQLEPG----------------------------------------------------------- 176 (411)
T ss_pred eccccceEEeccceeeccCCc-----------------------------------------------------------
Confidence 999999999999999775221
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----C-CCCCccCcchhHHHHHHHhhc-
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----G-APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~-~~~~~~sDIwSlGvil~ell~- 267 (879)
.+....||||.|.|||.+. + ..|+..+|+|++|||||.||.
T Consensus 177 --------------------------------ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaG 224 (411)
T KOG0599|consen 177 --------------------------------EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAG 224 (411)
T ss_pred --------------------------------hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcC
Confidence 0235579999999999884 2 348999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcc---cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 --PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||...... .....+.. ....|.|.+.+...++||.+||+.||.+|.|++|+|+||||..
T Consensus 225 cpPFwHRkQm-lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q 288 (411)
T KOG0599|consen 225 CPPFWHRKQM-LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQ 288 (411)
T ss_pred CCchhHHHHH-HHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHH
Confidence 66543222 22222333 3456889999999999999999999999999999999999963
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=290.15 Aligned_cols=218 Identities=20% Similarity=0.268 Sum_probs=165.5
Q ss_pred ccccccCceeecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCCC---CCCChhHHHHHHHHHHHH
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPK---RSVDVYECLHIFRQIVEI 94 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~---~~l~~~~~~~i~~qi~~~ 94 (879)
..|+..-+..+.|.+| ++..++ ++..+. ...+|+|+||+ .-+|..+++... ..++...++.+++||+.|
T Consensus 57 aiREisllk~L~~~~~--iv~L~d-v~~~~~~~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~g 132 (323)
T KOG0594|consen 57 AIREISLLKRLSHANH--IVRLHD-VIHTSNNHRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRG 132 (323)
T ss_pred hhHHHHHHHHhCCCcc--eEEEEe-eeeecccccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHH
Confidence 3466555555666665 666555 665443 23689999999 679999996654 357888999999999999
Q ss_pred HHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccc
Q 002801 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (879)
Q Consensus 95 l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (879)
|+|||++||+||||||+||||+++|.+||+|||+|+.+..+..
T Consensus 133 l~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~------------------------------------- 175 (323)
T KOG0594|consen 133 LAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR------------------------------------- 175 (323)
T ss_pred HHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc-------------------------------------
Confidence 9999999999999999999999999999999999986532210
Q ss_pred cCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccC
Q 002801 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCAS 253 (879)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~s 253 (879)
..+..++|.||+|||++.|. .|++..
T Consensus 176 -----------------------------------------------------~yt~evvTlWYRaPEvLlGs~~Ys~~v 202 (323)
T KOG0594|consen 176 -----------------------------------------------------TYTPEVVTLWYRAPEVLLGSTSYSTSV 202 (323)
T ss_pred -----------------------------------------------------cccccEEEeeccCHHHhcCCCcCCCCc
Confidence 12446899999999999998 499999
Q ss_pred cchhHHHHHHHhhc--CCCCChhhHhHHhhhcc---c-----------------CCC---------chhhccChhhHHHH
Q 002801 254 DIYRLGVLLFELFC--PFSTGEEKTRTMSSLRH---R-----------------VLP---------PQLLLKFPKEASFC 302 (879)
Q Consensus 254 DIwSlGvil~ell~--pf~~~~~~~~~~~~~~~---~-----------------~~~---------~~~~~~~~~~~~li 302 (879)
||||+|||++||++ |.+.+.........+-. . .++ .......+...+++
T Consensus 203 DiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll 282 (323)
T KOG0594|consen 203 DIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELL 282 (323)
T ss_pred chHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHH
Confidence 99999999999999 66655444333322210 0 000 01112234678999
Q ss_pred HHhcCCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 303 LWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 303 ~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
.+||+.+|.+|.|+..+|+||||........
T Consensus 283 ~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 283 SKLLQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred HHHhccCcccCcCHHHHhcChhhcccccchh
Confidence 9999999999999999999999998755443
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=291.26 Aligned_cols=308 Identities=17% Similarity=0.267 Sum_probs=264.0
Q ss_pred CCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEc-CCCCEEEEEeCCCcEEEEecCcccCcCcccccce
Q 002801 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFD-RDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (879)
Q Consensus 533 ~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fs-pdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~ 611 (879)
+..++.-..|..+-++|..++++...+ .|..+.|.+++|- |+.+++|.|+..+.+++|++.+... .
T Consensus 293 ~~~~l~vtaeQnl~l~d~~~l~i~k~i-----vG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c--------~ 359 (775)
T KOG0319|consen 293 MSQLLLVTAEQNLFLYDEDELTIVKQI-----VGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYC--------Q 359 (775)
T ss_pred cCceEEEEccceEEEEEccccEEehhh-----cCCchhheeeeecCCccceEEEEeCCCceEEEecCCCce--------E
Confidence 344566666788888888888877554 4777888888885 6788999999999999998876322 2
Q ss_pred EEeccCCCeeEEE-EeCCCCCeEEEeeCCCcEEEEEcCCCe----EEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEE
Q 002801 612 VEMASRSKLSSIC-WNSYIKSQIASSNFEGVVQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (879)
Q Consensus 612 ~~~~~~~~i~~l~-~~~~~~~~l~s~~~dg~V~vwd~~~~~----~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~ 686 (879)
+..+|...|.++. |.. +.+|+||+.|.+|++|-++++. ++....+|+..|.+|+++.-....|+++|.|++++
T Consensus 360 ii~GH~e~vlSL~~~~~--g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK 437 (775)
T KOG0319|consen 360 IIPGHTEAVLSLDVWSS--GDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLK 437 (775)
T ss_pred EEeCchhheeeeeeccc--CcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEE
Confidence 4567899999998 543 6899999999999999875443 45566799999999999875678999999999999
Q ss_pred EEeCCCCc-----eEEEE-----ecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-
Q 002801 687 LWSINQGV-----SIGTI-----KTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV- 755 (879)
Q Consensus 687 iwd~~~~~-----~i~~~-----~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs- 755 (879)
+|++...+ .+.+. .|...|+||+++|+ ..++||||.|.+.+||++.+... ..++.||+..|.+|.|+
T Consensus 438 ~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~n-dkLiAT~SqDktaKiW~le~~~l-~~vLsGH~RGvw~V~Fs~ 515 (775)
T KOG0319|consen 438 LWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPN-DKLIATGSQDKTAKIWDLEQLRL-LGVLSGHTRGVWCVSFSK 515 (775)
T ss_pred EecCCCcccccccceehhhHHHHhhcccccceEecCC-CceEEecccccceeeecccCceE-EEEeeCCccceEEEEecc
Confidence 99997521 11111 14567999999999 78999999999999999997774 89999999999999999
Q ss_pred CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCC
Q 002801 756 DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 756 ~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~ 835 (879)
.++.++|+|.|.+|+||.+.+. .|+++|.||++.|..+.|-.+|+.|++|+.||.+++|+++++..+.++
T Consensus 516 ~dq~laT~SgD~TvKIW~is~f------SClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tl---- 585 (775)
T KOG0319|consen 516 NDQLLATCSGDKTVKIWSISTF------SCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTL---- 585 (775)
T ss_pred ccceeEeccCCceEEEEEeccc------eeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhh----
Confidence 8899999999999999999997 899999999999999999999999999999999999999998877655
Q ss_pred CCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 836 ADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 836 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
+.|...|++++-++... +++||+.||.|.+|.
T Consensus 586 ---------D~H~DrvWaL~~~~~~~-~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 586 ---------DAHNDRVWALSVSPLLD-MFVTGGGDGRIIFWK 617 (775)
T ss_pred ---------hhccceeEEEeecCccc-eeEecCCCeEEEEee
Confidence 58899999999999999 999999999999996
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=258.48 Aligned_cols=239 Identities=25% Similarity=0.380 Sum_probs=211.3
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcC-----CCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS-----RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~-----~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw 688 (879)
..|...|+.++..+.+.+.+++++.|.++.+|++. .|.+++.+++|...|..+..++ ++++++++|.|+++++|
T Consensus 12 ~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~-dg~~alS~swD~~lrlW 90 (315)
T KOG0279|consen 12 EGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSS-DGNFALSASWDGTLRLW 90 (315)
T ss_pred cCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEcc-CCceEEeccccceEEEE
Confidence 46889999999998888999999999999999874 4677899999999999999999 99999999999999999
Q ss_pred eCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc--CCCCEEEEEEc-C--CCEEEE
Q 002801 689 SINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG--HNKTVSYVKFV-D--ATTLVS 762 (879)
Q Consensus 689 d~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~--h~~~V~~v~fs-~--~~~l~s 762 (879)
|+.++++.+.|..| ..|.+|+|+|+ .+.+++|+.|.+|++|++-..- ..+... |+..|++++|+ + .-+|++
T Consensus 91 Dl~~g~~t~~f~GH~~dVlsva~s~d-n~qivSGSrDkTiklwnt~g~c--k~t~~~~~~~~WVscvrfsP~~~~p~Ivs 167 (315)
T KOG0279|consen 91 DLATGESTRRFVGHTKDVLSVAFSTD-NRQIVSGSRDKTIKLWNTLGVC--KYTIHEDSHREWVSCVRFSPNESNPIIVS 167 (315)
T ss_pred EecCCcEEEEEEecCCceEEEEecCC-CceeecCCCcceeeeeeecccE--EEEEecCCCcCcEEEEEEcCCCCCcEEEE
Confidence 99999998888755 55999999999 7899999999999999987654 333332 38899999998 3 679999
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCC
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGP 842 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 842 (879)
+|.|++|++||+++. +....+.||+..++.+++||||..+++|+.||.+.+||+..++.+.++
T Consensus 168 ~s~DktvKvWnl~~~------~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl----------- 230 (315)
T KOG0279|consen 168 ASWDKTVKVWNLRNC------QLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSL----------- 230 (315)
T ss_pred ccCCceEEEEccCCc------chhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEec-----------
Confidence 999999999999997 677899999999999999999999999999999999999998876655
Q ss_pred CCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 843 ETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 843 ~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
+|...|.++||+|+.. .|+++. +-.||||++
T Consensus 231 ---~a~~~v~sl~fspnry-wL~~at-~~sIkIwdl 261 (315)
T KOG0279|consen 231 ---EAFDIVNSLCFSPNRY-WLCAAT-ATSIKIWDL 261 (315)
T ss_pred ---cCCCeEeeEEecCCce-eEeecc-CCceEEEec
Confidence 4577899999999987 555555 455999996
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=310.28 Aligned_cols=201 Identities=18% Similarity=0.218 Sum_probs=169.7
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
.||=.+..|+ | ......+|+||||+.||++..+.+. +.+++..++.|+..|+.||.|||++|||+||||.+||||
T Consensus 427 ~HPFL~~L~~--~-fQT~~~l~fvmey~~Ggdm~~~~~~--~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL 501 (694)
T KOG0694|consen 427 RHPFLVNLFS--C-FQTKEHLFFVMEYVAGGDLMHHIHT--DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL 501 (694)
T ss_pred cCCeEeeccc--c-cccCCeEEEEEEecCCCcEEEEEec--ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE
Confidence 6666666666 3 3456789999999999997776643 469999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+..|++||+|||+|+.--..
T Consensus 502 D~eGh~kiADFGlcKe~m~~------------------------------------------------------------ 521 (694)
T KOG0694|consen 502 DTEGHVKIADFGLCKEGMGQ------------------------------------------------------------ 521 (694)
T ss_pred cccCcEEecccccccccCCC------------------------------------------------------------
Confidence 99999999999999872100
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
..+..++||||.|||||++.+..|+.++|+|||||+|||||. ||.+.
T Consensus 522 ------------------------------g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd 571 (694)
T KOG0694|consen 522 ------------------------------GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD 571 (694)
T ss_pred ------------------------------CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 012356899999999999999999999999999999999999 99877
Q ss_pred hhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCcCchH
Q 002801 273 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRDSME 333 (879)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~~~~~ 333 (879)
.+.+...+++....+.|.+. +.++.+++.++|.++|.+|.. +++|.+||||+.+.....
T Consensus 572 dEee~FdsI~~d~~~yP~~l--s~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L 635 (694)
T KOG0694|consen 572 DEEEVFDSIVNDEVRYPRFL--SKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDL 635 (694)
T ss_pred CHHHHHHHHhcCCCCCCCcc--cHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHH
Confidence 77777777777777777654 478899999999999999965 588999999998775433
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=320.94 Aligned_cols=200 Identities=28% Similarity=0.448 Sum_probs=163.5
Q ss_pred cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCC
Q 002801 54 IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (879)
Q Consensus 54 ~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~ 133 (879)
..+||.||||+..+|+++++.+...-...+.+++|+||++||.|+|++|||||||||.||+|++.+.|||.|||+|....
T Consensus 669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~ 748 (1351)
T KOG1035|consen 669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLK 748 (1351)
T ss_pred eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhh
Confidence 45799999999999999886653222588999999999999999999999999999999999999999999999997731
Q ss_pred CC--CcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecccccccccccc
Q 002801 134 SD--SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDN 211 (879)
Q Consensus 134 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (879)
.. ..+. +. ++..
T Consensus 749 ~~~~~~d~------------------------------~~----------------~~~~-------------------- 762 (1351)
T KOG1035|consen 749 ENLESIDQ------------------------------DL----------------SFST-------------------- 762 (1351)
T ss_pred hhhhhHhh------------------------------cc----------------Cccc--------------------
Confidence 10 0000 00 0000
Q ss_pred ccchhhcccccCCCCccccccccccceeccccccCCC---CCccCcchhHHHHHHHhhcCCCCChhhHhHHhhhcccCCC
Q 002801 212 RVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP 288 (879)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvil~ell~pf~~~~~~~~~~~~~~~~~~~ 288 (879)
...++-....|..+||.-|+|||++.+.. |+.|+||||||||||||+.||.+.+++......++.+.+|
T Consensus 763 --------~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR~g~iP 834 (1351)
T KOG1035|consen 763 --------NRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLRKGSIP 834 (1351)
T ss_pred --------cccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcccCCCC
Confidence 00000011236689999999999998755 9999999999999999999999999999999999988887
Q ss_pred ch---hhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 289 PQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 289 ~~---~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
.. +.+..+..+.+|++||..||++||||.|+|++.||-.
T Consensus 835 ~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 835 EPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred CCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 77 6677788999999999999999999999999999974
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=287.91 Aligned_cols=197 Identities=20% Similarity=0.298 Sum_probs=165.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
..+..||++++..|. |++ ......|||||..||.|.+|+... +.|++.+++++|+||+.||.|+|.++|||||||.
T Consensus 106 IMSsLNHPhII~IyE-VFE--NkdKIvivMEYaS~GeLYDYiSer-~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKL 181 (668)
T KOG0611|consen 106 IMSSLNHPHIIQIYE-VFE--NKDKIVIVMEYASGGELYDYISER-GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKL 181 (668)
T ss_pred HHhhcCCCceeehhh-hhc--CCceEEEEEEecCCccHHHHHHHh-ccccHHHHHHHHHHHHHHHHHHhhccceecccch
Confidence 456789999999888 654 455789999999999999999554 6899999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||||+.++++||+|||++..+....
T Consensus 182 ENILLD~N~NiKIADFGLSNly~~~k------------------------------------------------------ 207 (668)
T KOG0611|consen 182 ENILLDQNNNIKIADFGLSNLYADKK------------------------------------------------------ 207 (668)
T ss_pred hheeecCCCCeeeeccchhhhhcccc------------------------------------------------------
Confidence 99999999999999999986542110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCC-CccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvil~ell~-- 267 (879)
-...+||++.|++||++.|.+| ++.+|-|||||+||.|+.
T Consensus 208 -------------------------------------fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGt 250 (668)
T KOG0611|consen 208 -------------------------------------FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGT 250 (668)
T ss_pred -------------------------------------HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcc
Confidence 1144799999999999999998 789999999999999998
Q ss_pred -CCCCChhhHhHHhhhccc-CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 268 -PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
||.+..-. .....+..+ .+.|. .+..+..||+|||..+|.+|.|+++|..|=|++
T Consensus 251 MPFDG~Dhk-~lvrQIs~GaYrEP~---~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 251 MPFDGRDHK-RLVRQISRGAYREPE---TPSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred cccCCchHH-HHHHHhhcccccCCC---CCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 99665544 444444444 33332 235788999999999999999999999999987
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=273.08 Aligned_cols=288 Identities=18% Similarity=0.344 Sum_probs=239.6
Q ss_pred ccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 562 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 562 ~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
..+..|.+.|.-+.||++|++||||+.|.+.-||++..... ..-.....+|..+|.-|.|+|. .++|++|+.|..
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~----~kl~~tlvgh~~~V~yi~wSPD-dryLlaCg~~e~ 292 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH----FKLKKTLVGHSQPVSYIMWSPD-DRYLLACGFDEV 292 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc----eeeeeeeecccCceEEEEECCC-CCeEEecCchHh
Confidence 34568999999999999999999999999999999875221 2222344678899999999995 899999999999
Q ss_pred EEEEEcCCCeEEEEec-cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec--CCceEEEEeeCCCCCEE
Q 002801 642 VQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT--KANVCCVQFPLDSGRSL 718 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~-~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~--~~~v~~v~~~p~~~~~l 718 (879)
+.+||+.+|.....+. +|...+.+++|.| |+..+++|+.|+++..||+. |..+..++. ...|.+++..+| |.++
T Consensus 293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~p-Dg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~D-gk~v 369 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCP-DGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYD-GKYV 369 (519)
T ss_pred eeeccCCcchhhhhcccCcCCCcceeEEcc-CCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCC-CcEE
Confidence 9999999999887774 3468899999999 99999999999999999997 444444443 245999999999 8888
Q ss_pred EEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEE
Q 002801 719 AFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN 797 (879)
Q Consensus 719 ~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~ 797 (879)
++...|..|++|+...... .. +..-..+|++...+ +++++++.=.+..+++||+... ..++.+.||...-.
T Consensus 370 l~v~~d~~i~l~~~e~~~d-r~-lise~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~------~lv~kY~Ghkq~~f 441 (519)
T KOG0293|consen 370 LLVTVDKKIRLYNREARVD-RG-LISEEQPITSFSISKDGKLALVNLQDQEIHLWDLEEN------KLVRKYFGHKQGHF 441 (519)
T ss_pred EEEecccceeeechhhhhh-hc-cccccCceeEEEEcCCCcEEEEEcccCeeEEeecchh------hHHHHhhcccccce
Confidence 8888999999999876542 22 22345689999999 9999999889999999999964 77889999976544
Q ss_pred EE--EEecC-CCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEE
Q 002801 798 FV--GLSVW-DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 874 (879)
Q Consensus 798 ~v--~~sp~-~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~ 874 (879)
-+ +|--. ..++|+||+|+.|+||+..+++++..+ .+|...|++|+|+|..+.++|+||.||+||
T Consensus 442 iIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L-------------sGHs~~vNcVswNP~~p~m~ASasDDgtIR 508 (519)
T KOG0293|consen 442 IIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL-------------SGHSKTVNCVSWNPADPEMFASASDDGTIR 508 (519)
T ss_pred EEEeccCCCCcceEEecCCCceEEEEEccCCceeEee-------------cCCcceeeEEecCCCCHHHhhccCCCCeEE
Confidence 33 45443 369999999999999999999988765 478899999999999887999999999999
Q ss_pred EEEe
Q 002801 875 ILEM 878 (879)
Q Consensus 875 vw~l 878 (879)
||..
T Consensus 509 IWg~ 512 (519)
T KOG0293|consen 509 IWGP 512 (519)
T ss_pred EecC
Confidence 9964
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-31 Score=251.71 Aligned_cols=277 Identities=22% Similarity=0.342 Sum_probs=233.5
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+..|.++|.++.|+.||+|.+|||.|++|++|+.-.+... ....+|...|..++.+. +...+++|+.|..|.
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~li-------ktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~ 84 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALI-------KTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQ 84 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeeccccccee-------eeecCCCceeeeccccc-cccccccCCCCceEE
Confidence 4578899999999999999999999999999996543221 12235777899888876 588999999999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC--ceEEEEec-CCceEEEEeeCCCCCEEEE
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG--VSIGTIKT-KANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~--~~i~~~~~-~~~v~~v~~~p~~~~~l~t 720 (879)
+||+++|+.++.+.+|...|+.|.|+. +...+++||-|.++++||.++. ++++.+.. ...|.+|... ++.|++
T Consensus 85 vwDV~TGkv~Rr~rgH~aqVNtV~fNe-esSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~---~heIva 160 (307)
T KOG0316|consen 85 VWDVNTGKVDRRFRGHLAQVNTVRFNE-ESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA---EHEIVA 160 (307)
T ss_pred EEEcccCeeeeecccccceeeEEEecC-cceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec---ccEEEe
Confidence 999999999999999999999999998 8899999999999999999865 68888874 6779999987 678999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEE--
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN-- 797 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~-- 797 (879)
|+.||+++.||+|.++. ...+.+ .+|++++|+ +++..+.++.|++|++.|-.++ +.+..+.||.+.-+
T Consensus 161 GS~DGtvRtydiR~G~l-~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tG------klL~sYkGhkn~eykl 231 (307)
T KOG0316|consen 161 GSVDGTVRTYDIRKGTL-SSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETG------KLLKSYKGHKNMEYKL 231 (307)
T ss_pred eccCCcEEEEEeeccee-ehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchh------HHHHHhcccccceeee
Confidence 99999999999999884 334444 579999999 9999999999999999999987 78999999988644
Q ss_pred EEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC-EEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 798 FVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF-ISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 798 ~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
..+++.....+++||+||.|++||+...+.+..+.. +... |.+++++|.-. -|.+|...+ +..|
T Consensus 232 dc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~-------------~~~v~v~dl~~hp~~~-~f~~A~~~~-~~~~ 296 (307)
T KOG0316|consen 232 DCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSV-------------VSTVIVTDLSCHPTMD-DFITATGHG-DLFW 296 (307)
T ss_pred eeeecccceeEEeccCCceEEEEEeccceeeeeecc-------------CCceeEEeeecccCcc-ceeEecCCc-eece
Confidence 456777788999999999999999998888776642 2333 89999999987 566665433 3344
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-30 Score=262.71 Aligned_cols=304 Identities=16% Similarity=0.236 Sum_probs=259.6
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
++|..|...-+|+.+++..... +.+|.+.|+++.|+.||.+||||+.+|.|+||+.+++... ......
T Consensus 80 aTGGgDD~AflW~~~~ge~~~e-----ltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~-------~~~~~e 147 (399)
T KOG0296|consen 80 ATGGGDDLAFLWDISTGEFAGE-----LTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQ-------WKLDQE 147 (399)
T ss_pred EecCCCceEEEEEccCCcceeE-----ecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceE-------EEeecc
Confidence 7888899999999999885544 4599999999999999999999999999999999874221 111134
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i 696 (879)
-..|.=++|+|. +..|+.|+.||.|-+|.+.++...+.+.+|..++++-.|.| +|+.+++|.+||+|++||..+++++
T Consensus 148 ~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p-dGKr~~tgy~dgti~~Wn~ktg~p~ 225 (399)
T KOG0296|consen 148 VEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP-DGKRILTGYDDGTIIVWNPKTGQPL 225 (399)
T ss_pred cCceEEEEeccc-ccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC-CCceEEEEecCceEEEEecCCCcee
Confidence 567888899994 99999999999999999998888888999999999999999 8999999999999999999999999
Q ss_pred EEEec--CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEc--------cCCCCEEEEEE---c-CCCEEEE
Q 002801 697 GTIKT--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI--------GHNKTVSYVKF---V-DATTLVS 762 (879)
Q Consensus 697 ~~~~~--~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~--------~h~~~V~~v~f---s-~~~~l~s 762 (879)
..+.. +....++.++.. +..++.|+.++.+++-...+++. +.... .+...+.+|.| + .=.+.|+
T Consensus 226 ~~~~~~e~~~~~~~~~~~~-~~~~~~g~~e~~~~~~~~~sgKV-v~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~ 303 (399)
T KOG0296|consen 226 HKITQAEGLELPCISLNLA-GSTLTKGNSEGVACGVNNGSGKV-VNCNNGTVPELKPSQEELDESVESIPSSSKLPLAAC 303 (399)
T ss_pred EEecccccCcCCccccccc-cceeEeccCCccEEEEccccceE-EEecCCCCccccccchhhhhhhhhcccccccchhhc
Confidence 88873 455788899888 88999999999999999888874 44443 34445556655 3 5567889
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCC
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGP 842 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 842 (879)
|+-||+|.|||+... .++....|...|..+.|-+ ..||++++.||.|+.||.+++..+..+
T Consensus 304 G~vdG~i~iyD~a~~-------~~R~~c~he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l~~~y----------- 364 (399)
T KOG0296|consen 304 GSVDGTIAIYDLAAS-------TLRHICEHEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQLKFTY----------- 364 (399)
T ss_pred ccccceEEEEecccc-------hhheeccCCCceEEEEEcC-cchheeeccCceEEeeeccccceEEEE-----------
Confidence 999999999999985 3455556888999999998 789999999999999999999877665
Q ss_pred CCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 843 ETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 843 ~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
.+|...|.+++.+|+.+ +++|++.|++.+||++
T Consensus 365 --~GH~~~Il~f~ls~~~~-~vvT~s~D~~a~VF~v 397 (399)
T KOG0296|consen 365 --TGHQMGILDFALSPQKR-LVVTVSDDNTALVFEV 397 (399)
T ss_pred --ecCchheeEEEEcCCCc-EEEEecCCCeEEEEec
Confidence 47889999999999999 9999999999999985
|
|
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=273.54 Aligned_cols=278 Identities=19% Similarity=0.348 Sum_probs=234.8
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd 646 (879)
....|+|+.++ .+.+++|..|++|+|||.++... .....+|.+.|.|+.|. ...|++|+.|.+|+|||
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c-------~~~L~GHtGSVLCLqyd---~rviisGSSDsTvrvWD 263 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLEC-------LKILTGHTGSVLCLQYD---ERVIVSGSSDSTVRVWD 263 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHH-------HHhhhcCCCcEEeeecc---ceEEEecCCCceEEEEe
Confidence 46789999986 45789999999999999876322 22345799999999985 56999999999999999
Q ss_pred cCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEE---EE-ecCCceEEEEeeCCCCCEEEEEe
Q 002801 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIG---TI-KTKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 647 ~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~---~~-~~~~~v~~v~~~p~~~~~l~tgs 722 (879)
+++++++.++-.|...|..+.|+. .+++|+|.|.++.+||+.+...+. .+ .|.+.|+.|.|+ .++++++|
T Consensus 264 v~tge~l~tlihHceaVLhlrf~n---g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd---~kyIVsAS 337 (499)
T KOG0281|consen 264 VNTGEPLNTLIHHCEAVLHLRFSN---GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---DKYIVSAS 337 (499)
T ss_pred ccCCchhhHHhhhcceeEEEEEeC---CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc---cceEEEec
Confidence 999999999999999999999974 699999999999999998765332 12 256789999997 56999999
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEe
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 802 (879)
.|.+|++|++.+... +.++.+|+..|.|+.| .+.+++|||.|++|++||+..+ .+++.+.||..-|.++.|
T Consensus 338 gDRTikvW~~st~ef-vRtl~gHkRGIAClQY-r~rlvVSGSSDntIRlwdi~~G------~cLRvLeGHEeLvRciRF- 408 (499)
T KOG0281|consen 338 GDRTIKVWSTSTCEF-VRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECG------ACLRVLEGHEELVRCIRF- 408 (499)
T ss_pred CCceEEEEeccceee-ehhhhcccccceehhc-cCeEEEecCCCceEEEEecccc------HHHHHHhchHHhhhheee-
Confidence 999999999999985 9999999999999988 5899999999999999999998 899999999999999999
Q ss_pred cCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
+++.|++|+.||+|+|||+......... ...+.-.....|++.|-.+.|. .- .+++++.|.+|-|||+.
T Consensus 409 -d~krIVSGaYDGkikvWdl~aaldpra~----~~~~Cl~~lv~hsgRVFrLQFD--~f-qIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 409 -DNKRIVSGAYDGKIKVWDLQAALDPRAP----ASTLCLRTLVEHSGRVFRLQFD--EF-QIISSSHDDTILIWDFL 477 (499)
T ss_pred -cCceeeeccccceEEEEecccccCCccc----ccchHHHhhhhccceeEEEeec--ce-EEEeccCCCeEEEEEcC
Confidence 5789999999999999999865432111 1111112226789999999997 44 79999999999999973
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2e-33 Score=299.57 Aligned_cols=199 Identities=21% Similarity=0.270 Sum_probs=170.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|+|++.++. .+ |...++++|.|||.| +|+++|... +.++++.++.|+.|++.||.|||+.+|+|||+||.
T Consensus 55 ~r~lkHpniv~m~e-sf--Et~~~~~vVte~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPq 129 (808)
T KOG0597|consen 55 LRSLKHPNIVEMLE-SF--ETSAHLWVVTEYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQ 129 (808)
T ss_pred HHhcCCcchhhHHH-hh--cccceEEEEehhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcc
Confidence 44578999998887 43 456689999999988 999999655 68999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||||...|.+|++|||+|+..+....
T Consensus 130 niLl~~~~~~KlcdFg~Ar~m~~~t~------------------------------------------------------ 155 (808)
T KOG0597|consen 130 NILLEKGGTLKLCDFGLARAMSTNTS------------------------------------------------------ 155 (808)
T ss_pred eeeecCCCceeechhhhhhhcccCce------------------------------------------------------
Confidence 99999999999999999987432100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
-.+..-|||.|||||++.+.+|+..+|+||||||||||++ |
T Consensus 156 ------------------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PP 199 (808)
T KOG0597|consen 156 ------------------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPP 199 (808)
T ss_pred ------------------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCC
Confidence 1144689999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|+...-......++.....+|. ..+..+..|+..+|.+||.+|.|..+++.|||.++
T Consensus 200 F~a~si~~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 200 FYARSITQLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred chHHHHHHHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 8766655555556665555555 66788999999999999999999999999999875
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-29 Score=266.11 Aligned_cols=290 Identities=18% Similarity=0.275 Sum_probs=234.1
Q ss_pred cccCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 563 DLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~-~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
.+.||+..|++++|-|... .++||+.|++|.+|+=. ..++....-.|..-|.|+.|+|. ++.+++.+.||+
T Consensus 142 ei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGP-------PFKFk~s~r~HskFV~~VRysPD-G~~Fat~gsDgk 213 (603)
T KOG0318|consen 142 EITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGP-------PFKFKSSFREHSKFVNCVRYSPD-GSRFATAGSDGK 213 (603)
T ss_pred eeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCC-------CeeeeecccccccceeeEEECCC-CCeEEEecCCcc
Confidence 4556777777777766443 46777777777776522 22222333357778999999995 999999999999
Q ss_pred EEEEEcCCCeEEEEec---cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc----eEEEEeeCCC
Q 002801 642 VQVWDVSRSQVLTEMR---EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN----VCCVQFPLDS 714 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~---~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~----v~~v~~~p~~ 714 (879)
|.+||-.+++.+..+. .|++.|..++|+| |+++|+|+|.|.+++|||+.+.+.+.++..... ...+-|.
T Consensus 214 i~iyDGktge~vg~l~~~~aHkGsIfalsWsP-Ds~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq--- 289 (603)
T KOG0318|consen 214 IYIYDGKTGEKVGELEDSDAHKGSIFALSWSP-DSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ--- 289 (603)
T ss_pred EEEEcCCCccEEEEecCCCCccccEEEEEECC-CCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe---
Confidence 9999999999999987 8999999999999 999999999999999999999999999986443 2333354
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccc------------
Q 002801 715 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRV------------ 781 (879)
Q Consensus 715 ~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~------------ 781 (879)
...|++.+.+|+|.+++..... ++.++.||.+.|+++..+ ++.+|+||+.||.|.-||..++....
T Consensus 290 kd~lItVSl~G~in~ln~~d~~-~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~ 368 (603)
T KOG0318|consen 290 KDHLITVSLSGTINYLNPSDPS-VLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKG 368 (603)
T ss_pred CCeEEEEEcCcEEEEecccCCC-hhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEE
Confidence 3478999999999999999998 799999999999999999 99999999999999999987643200
Q ss_pred --------------------------------------------------------------------------------
Q 002801 782 -------------------------------------------------------------------------------- 781 (879)
Q Consensus 782 -------------------------------------------------------------------------------- 781 (879)
T Consensus 369 ~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~ 448 (603)
T KOG0318|consen 369 MAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSA 448 (603)
T ss_pred EeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccce
Confidence
Q ss_pred --------------cC-------------CceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccC
Q 002801 782 --------------ID-------------TPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFN 834 (879)
Q Consensus 782 --------------~~-------------~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~ 834 (879)
.+ ........|..++++|++|||+.|||+|...+.|-+|++.+.+.....
T Consensus 449 vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~--- 525 (603)
T KOG0318|consen 449 VAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNR--- 525 (603)
T ss_pred EEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecce---
Confidence 00 001122347889999999999999999999999999999876542211
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 835 HADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 835 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..=|...|.+|+|+|+.. ++|||+-|-+|.||++
T Consensus 526 ---------w~FHtakI~~~aWsP~n~-~vATGSlDt~Viiysv 559 (603)
T KOG0318|consen 526 ---------WAFHTAKINCVAWSPNNK-LVATGSLDTNVIIYSV 559 (603)
T ss_pred ---------eeeeeeeEEEEEeCCCce-EEEeccccceEEEEEc
Confidence 123678899999999999 9999999999999986
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.4e-30 Score=277.73 Aligned_cols=319 Identities=15% Similarity=0.257 Sum_probs=268.0
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccC-----------
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN----------- 602 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~----------- 602 (879)
+-+++|+.|-.+++|.....+- +....+.+|.+.|-++-|..|...+.|.+.||.|.+|.++..-.
T Consensus 158 r~l~~gsrD~s~rl~~v~~~k~---~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg 234 (893)
T KOG0291|consen 158 RLLVTGSRDLSARLFGVDGNKN---LFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFVWTCDLRPPELDKAEKDEEG 234 (893)
T ss_pred ceEEeccccceEEEEEeccccc---cceEeccCCCcceEEEEeccCcceEEEEecCceEEEEEecCCCcccccccccccc
Confidence 5568889999999998877554 44455779999999999999999999999999999999872100
Q ss_pred ---------cCcccc---c---ceEEe-ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEE
Q 002801 603 ---------ENRDIH---Y---PVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSI 666 (879)
Q Consensus 603 ---------~~~~~~---~---~~~~~-~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv 666 (879)
.....+ + ....+ ....+++|.+|++. .+.|++|-..|...+|++....+++.+.-.+.+|..+
T Consensus 235 ~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~-t~~lvvgFssG~f~LyelP~f~lih~LSis~~~I~t~ 313 (893)
T KOG0291|consen 235 SDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKG-TNLLVVGFSSGEFGLYELPDFNLIHSLSISDQKILTV 313 (893)
T ss_pred cccccccccchhhhcceEEEEEEeeeecccccceeeeeccCC-ceEEEEEecCCeeEEEecCCceEEEEeecccceeeEE
Confidence 000000 0 11111 23378999999984 7889999999999999999999999988778899999
Q ss_pred EEecCCCCEEEEEeCC-CcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc
Q 002801 667 DFSSADPTLLASGSDD-GSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG 744 (879)
Q Consensus 667 ~~sp~~~~~lasgs~D-g~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~ 744 (879)
.|+. .|..+|.|+.. |.+.||+..+...+...+.| ..++|++++|| |.++|+|+.||.|++||..++-+ ..+|..
T Consensus 314 ~~N~-tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpD-gq~iaTG~eDgKVKvWn~~SgfC-~vTFte 390 (893)
T KOG0291|consen 314 SFNS-TGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPD-GQLIATGAEDGKVKVWNTQSGFC-FVTFTE 390 (893)
T ss_pred Eecc-cCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCC-CcEEEeccCCCcEEEEeccCceE-EEEecc
Confidence 9998 89999998765 89999999998888777754 55999999999 89999999999999999999884 999999
Q ss_pred CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC-cEEEEEEecCCCEEEEEeCCC-cEEEEe
Q 002801 745 HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN-VKNFVGLSVWDGYVATGSETN-EVFVYH 821 (879)
Q Consensus 745 h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~-~v~~v~~sp~~~~lasgs~Dg-~v~vw~ 821 (879)
|.+.|+.+.|+ .++.++|+|-||+|+.||+... +.-++|..... ...||+..|.|..+.+|+.|. .|+||+
T Consensus 391 Hts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY------rNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS 464 (893)
T KOG0291|consen 391 HTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRY------RNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWS 464 (893)
T ss_pred CCCceEEEEEEecCCEEEEeecCCeEEeeeeccc------ceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEE
Confidence 99999999999 9999999999999999999986 66778775432 356778888899888888875 599999
Q ss_pred cCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 822 KAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
+.+++.+..+ .+|.++|++++|+|.++ .|++++.|.+||+|+++
T Consensus 465 ~qTGqllDiL-------------sGHEgPVs~l~f~~~~~-~LaS~SWDkTVRiW~if 508 (893)
T KOG0291|consen 465 VQTGQLLDIL-------------SGHEGPVSGLSFSPDGS-LLASGSWDKTVRIWDIF 508 (893)
T ss_pred eecCeeeehh-------------cCCCCcceeeEEccccC-eEEeccccceEEEEEee
Confidence 9998766543 57899999999999999 99999999999999985
|
|
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-32 Score=296.11 Aligned_cols=211 Identities=17% Similarity=0.195 Sum_probs=169.8
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
++..++.-+||++|++|+.++. ++.++|..|||.||-....+-.-++.|.+.++..+++|+++||.|||+++|||||
T Consensus 79 EIeILa~CdHP~ivkLl~ayy~---enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRD 155 (1187)
T KOG0579|consen 79 EIEILAECDHPVIVKLLSAYYF---ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRD 155 (1187)
T ss_pred hhhhhhcCCChHHHHHHHHHhc---cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhh
Confidence 3445666789999999994443 3468999999999999998866678899999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||..|||++.+|.++++|||++......
T Consensus 156 LKAGNiL~TldGdirLADFGVSAKn~~t---------------------------------------------------- 183 (1187)
T KOG0579|consen 156 LKAGNILLTLDGDIRLADFGVSAKNKST---------------------------------------------------- 183 (1187)
T ss_pred ccccceEEEecCcEeeecccccccchhH----------------------------------------------------
Confidence 9999999999999999999987542100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHH
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLL 262 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil 262 (879)
. .+...++|||+|||||++. ..+|++++||||||++|
T Consensus 184 ---------------------------------~-----qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITL 225 (1187)
T KOG0579|consen 184 ---------------------------------R-----QKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITL 225 (1187)
T ss_pred ---------------------------------H-----hhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHH
Confidence 0 0224579999999999875 56799999999999999
Q ss_pred HHhhc--CCCCChhhHhHHhhhcccCCCch--hhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 263 FELFC--PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 263 ~ell~--pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
.||.- |....-...+.+-.+.....|.. +...+..+.+|+.+||.+||..||+++++|+||||......
T Consensus 226 IEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~Sn 298 (1187)
T KOG0579|consen 226 IEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSN 298 (1187)
T ss_pred HHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcc
Confidence 99998 55555555555544444433322 22345678899999999999999999999999999976544
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.4e-33 Score=299.81 Aligned_cols=208 Identities=18% Similarity=0.165 Sum_probs=174.3
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
.+...++...||++|..+..+.++ +..++|+|+||+||+|.+.|++.+ ..+++..+..+|.||+.||.|||+.+|+|
T Consensus 52 ~E~~lis~~~hP~iv~y~ds~~~~--~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLH 129 (426)
T KOG0589|consen 52 QEMDLLSKLLHPNIVEYKDSFEED--GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLH 129 (426)
T ss_pred HHHHHHHhccCCCeeeeccchhcC--CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 344456778999999988843332 233899999999999999995443 67899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
||||++||+++.++.||+.|||+|+..+.+..
T Consensus 130 RDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~------------------------------------------------ 161 (426)
T KOG0589|consen 130 RDLKCANIFLTKDKKVKLGDFGLAKILNPEDS------------------------------------------------ 161 (426)
T ss_pred ccchhhhhhccccCceeecchhhhhhcCCchh------------------------------------------------
Confidence 99999999999999999999999998644410
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
....++||+.||+||++.+.+|+.++|||||||++|||
T Consensus 162 ------------------------------------------~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm 199 (426)
T KOG0589|consen 162 ------------------------------------------LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEM 199 (426)
T ss_pred ------------------------------------------hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHH
Confidence 01336999999999999999999999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
++ +|...+.....+++.+. ...|.+...+.++..+|..||..+|..||++.++|.+|.+..
T Consensus 200 ~~lk~aF~a~~m~~Li~ki~~~-~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~ 263 (426)
T KOG0589|consen 200 CTLKPAFKASNMSELILKINRG-LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLR 263 (426)
T ss_pred HhcccccCccchHHHHHHHhhc-cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhh
Confidence 99 66555555445544444 467777788899999999999999999999999999987754
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=298.42 Aligned_cols=201 Identities=21% Similarity=0.234 Sum_probs=168.5
Q ss_pred ecccc-cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+.+.. |+|++.++. ++++ ....|+|||+|.||.|++.|.+. . +++.++..+++||+.++.|||+.||+||||||
T Consensus 89 l~~l~~hpniv~l~~-~~e~--~~~~~lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKp 163 (382)
T KOG0032|consen 89 LQQLSGHPNIVQLKD-AFED--PDSVYLVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKP 163 (382)
T ss_pred HHhccCCCCEEEEEE-EEEc--CCeEEEEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCH
Confidence 33433 888888777 5544 34789999999999999999554 3 89999999999999999999999999999999
Q ss_pred cceeeccC----CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 111 SCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 111 ~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
+|||+... +.+|++|||++......
T Consensus 164 EN~L~~~~~~~~~~ik~~DFGla~~~~~~--------------------------------------------------- 192 (382)
T KOG0032|consen 164 ENLLLASKDEGSGRIKLIDFGLAKFIKPG--------------------------------------------------- 192 (382)
T ss_pred HHeeeccccCCCCcEEEeeCCCceEccCC---------------------------------------------------
Confidence 99999633 47999999999764221
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
......+||+.|+|||++.+.+|+..+||||+||++|.|+
T Consensus 193 ----------------------------------------~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL 232 (382)
T KOG0032|consen 193 ----------------------------------------ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILL 232 (382)
T ss_pred ----------------------------------------ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHh
Confidence 0124469999999999999999999999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
+ ||............+... +..+.|...+..+.+||..||..||.+|+|+.++|+|||++..
T Consensus 233 ~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 233 SGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred hCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 9 887776555555555443 3457778889999999999999999999999999999999875
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-32 Score=287.46 Aligned_cols=215 Identities=17% Similarity=0.176 Sum_probs=166.5
Q ss_pred ccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcC
Q 002801 24 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 24 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
|+|... ++.-+|||++..++.+. ....+|+||.||.+||+.++++.. ...+++..+..|++++++||+|||.+|
T Consensus 72 ~kE~~~--msl~~HPNIv~~~~sFv---v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G 146 (516)
T KOG0582|consen 72 RKEVQT--MSLIDHPNIVTYHCSFV---VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNG 146 (516)
T ss_pred HHHHHH--hhhcCCCCcceEEEEEE---ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcC
Confidence 555443 34568999998777322 345689999999999999999542 224899999999999999999999999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
-||||||+.||||+.+|.|||+|||....+-.. |
T Consensus 147 ~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~----G------------------------------------------ 180 (516)
T KOG0582|consen 147 HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS----G------------------------------------------ 180 (516)
T ss_pred ceecccccccEEEcCCCcEEEcCceeeeeeccc----C------------------------------------------
Confidence 999999999999999999999999987543110 0
Q ss_pred cccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCcchhHHH
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGV 260 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGv 260 (879)
.+. . .+...++||++|||||+++. ..|++|+||||||+
T Consensus 181 ------------~R~--------------------------~--~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGI 220 (516)
T KOG0582|consen 181 ------------DRQ--------------------------V--TRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGI 220 (516)
T ss_pred ------------cee--------------------------e--EeeccccCcccccChHHhhhcccCccchhhhhhhhH
Confidence 000 0 01134699999999999754 35999999999999
Q ss_pred HHHHhhc---CCCCChhhHhHHhhhcccCCCc--------hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 261 LLFELFC---PFSTGEEKTRTMSSLRHRVLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 261 il~ell~---pf~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
+..||.+ ||..-......+..+...+..+ ........+..+|..||.+||.+|||++++|.|+||+...
T Consensus 221 TA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 221 TACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred HHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 9999999 8876666666666666554311 1122344577999999999999999999999999998643
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=262.43 Aligned_cols=270 Identities=23% Similarity=0.405 Sum_probs=230.6
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCC---EEEEEeCCCcEEEEecCcccCcCcccccc
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE---LFAAAGVNKKIKVFECDAIINENRDIHYP 610 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~---~lat~~~dg~I~iwd~~~~~~~~~~~~~~ 610 (879)
.-.++|.+||.+++|+.+ ++.... +.||+++|.+++|.-... .|++|+.|.++++|.++.+.+.....+
T Consensus 116 ~~IltgsYDg~~riWd~~-Gk~~~~-----~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~-- 187 (423)
T KOG0313|consen 116 KWILTGSYDGTSRIWDLK-GKSIKT-----IVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALK-- 187 (423)
T ss_pred ceEEEeecCCeeEEEecC-CceEEE-----EecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhhHHh--
Confidence 345899999999999865 444433 349999999988865333 599999999999999986443322222
Q ss_pred eEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC-------------------------CeEEEEeccCCCcEEE
Q 002801 611 VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-------------------------SQVLTEMREHERRVWS 665 (879)
Q Consensus 611 ~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~-------------------------~~~~~~~~~h~~~v~s 665 (879)
...+|...|-||+..+. +..+++|+.|.++.||+.++ ..++..+.+|+.+|.+
T Consensus 188 -~~~GHk~~V~sVsv~~s-gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~ 265 (423)
T KOG0313|consen 188 -VCRGHKRSVDSVSVDSS-GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSS 265 (423)
T ss_pred -HhcccccceeEEEecCC-CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceee
Confidence 22379999999999884 99999999999999999321 1245667899999999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc--eeeEEEc
Q 002801 666 IDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK--IPLCTLI 743 (879)
Q Consensus 666 v~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~--~~~~~~~ 743 (879)
|.|++ ...+.++|.|.+|+.||+.++..+.++......+||.++|. .++|++|+.|..+++||.|++. .+..+|.
T Consensus 266 V~w~d--~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~-~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~ 342 (423)
T KOG0313|consen 266 VVWSD--ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPL-SKLLASGSSDRHIRLWDPRTGDGSVVSQSLI 342 (423)
T ss_pred EEEcC--CCceEeecccceEEEEEeecccceeeeecCcceeEeecccc-cceeeecCCCCceeecCCCCCCCceeEEeee
Confidence 99986 67899999999999999999999999999999999999998 8999999999999999999874 4567888
Q ss_pred cCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 744 GHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 744 ~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
+|+..|.+++|+ +...|++||.|+++++||+++.. .++..+.+|...|.++.|+ ++.+|++||.|+.|+|+.
T Consensus 343 gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k-----~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 343 GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTK-----APLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred cchhhhhheecCCCCceEEEEEecCCeEEEEEeccCC-----CcceeeccCCceEEEEecc-CCceEEeccCcceEEEec
Confidence 999999999998 77889999999999999999972 4899999999999999997 577999999999999996
Q ss_pred c
Q 002801 822 K 822 (879)
Q Consensus 822 ~ 822 (879)
-
T Consensus 417 ~ 417 (423)
T KOG0313|consen 417 G 417 (423)
T ss_pred c
Confidence 4
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-33 Score=293.24 Aligned_cols=206 Identities=17% Similarity=0.198 Sum_probs=166.5
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
++..++..+++++...|+ .+.. +..++++||||.||++.+.|+.. ..+++.++.-|+++++.||.|||+++.+|||
T Consensus 61 ei~~Ls~~~~~~it~yyg-syl~--g~~LwiiMey~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~kiHrD 136 (467)
T KOG0201|consen 61 EISVLSQCDSPNITEYYG-SYLK--GTKLWIIMEYCGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEKKIHRD 136 (467)
T ss_pred HHHHHHhcCcchHHhhhh-heee--cccHHHHHHHhcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcceeccc
Confidence 444567777777766665 2222 34689999999999999999665 4569999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||+.|||+...|.||++|||++.+.....
T Consensus 137 IKaanil~s~~g~vkl~DfgVa~ql~~~~--------------------------------------------------- 165 (467)
T KOG0201|consen 137 IKAANILLSESGDVKLADFGVAGQLTNTV--------------------------------------------------- 165 (467)
T ss_pred ccccceeEeccCcEEEEecceeeeeechh---------------------------------------------------
Confidence 99999999999999999999986642210
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
.+...++||+.|||||++.+..|+.++||||||++.+||++
T Consensus 166 ---------------------------------------~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~ 206 (467)
T KOG0201|consen 166 ---------------------------------------KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAK 206 (467)
T ss_pred ---------------------------------------hccccccccccccchhhhccccccchhhhhhhhHHHHHHhc
Confidence 01244699999999999998889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|.........++..+.+...|......++.+++|+..||.+||+.||+|.++|+|+|++.
T Consensus 207 GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 207 GEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred CCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 443444444444455555444444456677999999999999999999999999999986
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-32 Score=300.20 Aligned_cols=204 Identities=18% Similarity=0.182 Sum_probs=162.2
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|++++..++ .+. .....|+||||+.|++|.+++.+. +.+++.+++.|+.||+.||+|||++||+|||||
T Consensus 47 ~~l~~l~hp~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlk 122 (323)
T cd05571 47 RVLQNTRHPFLTALKY-SFQ--THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLK 122 (323)
T ss_pred HHHHhCCCCCCCCEEE-EEE--cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 3445667888877665 343 344689999999999999999654 578999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+||+|||+++.......
T Consensus 123 p~NIll~~~~~~kl~DfG~a~~~~~~~~---------------------------------------------------- 150 (323)
T cd05571 123 LENLMLDKDGHIKITDFGLCKEGISDGA---------------------------------------------------- 150 (323)
T ss_pred HHHEEECCCCCEEEeeCCCCcccccCCC----------------------------------------------------
Confidence 9999999999999999999864211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 151 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~ 192 (323)
T cd05571 151 --------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 192 (323)
T ss_pred --------------------------------------cccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCC
Confidence 0122478999999999999999999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||................. ..+...++.+.+||.+||+.||++|| ++.++++||||....
T Consensus 193 ~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~ 258 (323)
T cd05571 193 LPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258 (323)
T ss_pred CCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 8865544333222222221 22234668899999999999999999 899999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-32 Score=262.61 Aligned_cols=202 Identities=17% Similarity=0.202 Sum_probs=169.6
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
+....+|.+|+|++..|+ ...|+. ..|+++||..+|+|...|.. ....+++..+..+++|++.||.|+|.++||||
T Consensus 72 EiEIqs~L~hpnilrlY~-~fhd~~--riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhR 148 (281)
T KOG0580|consen 72 EIEIQSHLRHPNILRLYG-YFHDSK--RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHR 148 (281)
T ss_pred eeEeecccCCccHHhhhh-heeccc--eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccC
Confidence 344578999999999888 555544 57999999999999999953 34569999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||+|+|++..|.+|++|||-+-....
T Consensus 149 diKpenlLlg~~~~lkiAdfGwsV~~p~---------------------------------------------------- 176 (281)
T KOG0580|consen 149 DIKPENLLLGSAGELKIADFGWSVHAPS---------------------------------------------------- 176 (281)
T ss_pred CCCHHHhccCCCCCeeccCCCceeecCC----------------------------------------------------
Confidence 9999999999999999999998743210
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
.+....|||.-|.+||...+..++..+|+|++||+.||++
T Consensus 177 ----------------------------------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yefl 216 (281)
T KOG0580|consen 177 ----------------------------------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFL 216 (281)
T ss_pred ----------------------------------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHH
Confidence 0234579999999999999999999999999999999999
Q ss_pred c---CCCCChhhHhHHhhhcc-cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 267 C---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
. ||.+.. .......++. ....| ...+..+++||.+||.++|.+|.+..|++.|||+..
T Consensus 217 vg~ppFes~~-~~etYkrI~k~~~~~p--~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 217 VGLPPFESQS-HSETYKRIRKVDLKFP--STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred hcCCchhhhh-hHHHHHHHHHccccCC--cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 8 887666 4444444443 33334 456788999999999999999999999999999864
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=250.36 Aligned_cols=244 Identities=24% Similarity=0.451 Sum_probs=214.7
Q ss_pred CCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEecCcccCcCcccccceE-EeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 566 NSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 566 ~h~~~V~~l~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
.-.+.+..++|+++ ...+++|+.||.++|||..... .|+. ...|...|.++.|++.....+++++.||+|+
T Consensus 58 d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s-------~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiK 130 (311)
T KOG0277|consen 58 DTEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS-------KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIK 130 (311)
T ss_pred ecccceeEeeecCCCcceEEEEecCceEEEeccCCCC-------cchhHHHhhhhheEEeccccccceeEEeeccCCceE
Confidence 34678999999995 4578899999999999954311 1222 2358899999999998899999999999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC-CceEEEEeeCCCCCEEEEEe
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs 722 (879)
+|+...++.+.++.+|...|....|+|..+++|+++|.|+++++||++....-..|..+ .++.|+.|+.-+.+.++||+
T Consensus 131 LW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~ 210 (311)
T KOG0277|consen 131 LWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGG 210 (311)
T ss_pred eecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecC
Confidence 99999999999999999999999999999999999999999999999876444446654 58999999998889999999
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEE
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
.|+.|++||+|+.+.|+..+.+|.-+|..|+|+ ....|+|+|.|-+++|||..... ..+.+...|+.-+..+.
T Consensus 211 vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT~riw~~~~~d-----s~~e~~~~HtEFv~g~D 285 (311)
T KOG0277|consen 211 VDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDMTVRIWDPERQD-----SAIETVDHHTEFVCGLD 285 (311)
T ss_pred CCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccceEEecccccch-----hhhhhhhccceEEeccc
Confidence 999999999999999999999999999999998 67789999999999999998763 56777778888899999
Q ss_pred EecC-CCEEEEEeCCCcEEEEe
Q 002801 801 LSVW-DGYVATGSETNEVFVYH 821 (879)
Q Consensus 801 ~sp~-~~~lasgs~Dg~v~vw~ 821 (879)
||+. ..++|+++.|+.++||+
T Consensus 286 ws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 286 WSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred cccccCceeeecccccceeeec
Confidence 9986 55999999999999997
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-32 Score=292.53 Aligned_cols=200 Identities=15% Similarity=0.105 Sum_probs=160.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. ++.+ ....|++|||+.|++|.+++... +.+++.+++.++.||+.||+|||++||+||||||
T Consensus 54 ~l~~l~hp~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp 129 (291)
T cd05612 54 VLKEVSHPFIIRLFW-TEHD--QRFLYMLMEYVPGGELFSYLRNS-GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKP 129 (291)
T ss_pred HHHhCCCCcHhhhHh-hhcc--CCeEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence 455667888888776 4433 34689999999999999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.....
T Consensus 130 ~NIli~~~~~~kl~Dfg~~~~~~~~------------------------------------------------------- 154 (291)
T cd05612 130 ENILLDKEGHIKLTDFGFAKKLRDR------------------------------------------------------- 154 (291)
T ss_pred HHeEECCCCCEEEEecCcchhccCC-------------------------------------------------------
Confidence 9999999999999999998653110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 155 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~ 196 (291)
T cd05612 155 --------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYP 196 (291)
T ss_pred --------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 012368999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~ 329 (879)
||................. +.....++.+.+||.+||..||.+||+ +.++++||||+...
T Consensus 197 pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 261 (291)
T cd05612 197 PFFDDNPFGIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD 261 (291)
T ss_pred CCCCCCHHHHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence 7765544333333322221 122234678899999999999999995 99999999998643
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.8e-32 Score=294.61 Aligned_cols=203 Identities=16% Similarity=0.172 Sum_probs=161.8
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+.+.+|++++..+. .+.+ ....|+||||+.|++|.+++.+. +.+++.+++.++.||+.||.|||++||+|||||
T Consensus 45 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 45 TVLAQVNCPFIVPLKF-SFQS--PEKLYLVLAFINGGELFHHLQRE-GRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred HHHHhCCCCcEeceee-EEec--CCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 3455668888888766 4443 34689999999999999999654 568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+||+|||+++.......
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------------- 148 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDDD---------------------------------------------------- 148 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCCC----------------------------------------------------
Confidence 9999999999999999999864211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 149 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~ 190 (312)
T cd05585 149 --------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL 190 (312)
T ss_pred --------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCC
Confidence 0122478999999999999899999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCC
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~ 328 (879)
||............+.... ..+...++.+.+|+.+||..||.+|| ++.+++.||||...
T Consensus 191 ~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 191 PPFYDENVNEMYRKILQEPL--RFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred CCcCCCCHHHHHHHHHcCCC--CCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 7765544333333333221 22234567899999999999999997 58999999999864
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=260.71 Aligned_cols=290 Identities=18% Similarity=0.270 Sum_probs=254.2
Q ss_pred CCCCCCCcccccccCCCCCCCCCccccccccccCCCccccccCCCCceecccccCceEEEeecCcEEEEEecc---cccc
Q 002801 489 VKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQ---GDLL 565 (879)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~w~~~~~~~~~~l~~---~~l~ 565 (879)
.....+..+.|+.|||||.+. ++|+.||.|.+|++-++++..+++. ..++
T Consensus 208 IKFg~KSh~EcA~FSPDgqyL---------------------------vsgSvDGFiEVWny~~GKlrKDLkYQAqd~fM 260 (508)
T KOG0275|consen 208 IKFGQKSHVECARFSPDGQYL---------------------------VSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFM 260 (508)
T ss_pred eecccccchhheeeCCCCceE---------------------------eeccccceeeeehhccchhhhhhhhhhhccee
Confidence 344556678889999999988 8999999999999999999988873 3577
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vw 645 (879)
-+.++|.|+.|++|.+++|+|+.||+|+||.+.++.+..+ .+..|...|+|+.|+. +++.+++++.|.+|++.
T Consensus 261 Mmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRr------FdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiH 333 (508)
T KOG0275|consen 261 MMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRR------FDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIH 333 (508)
T ss_pred ecccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHH------hhhhhccCeeEEEEcc-CcchhhcccccceEEEe
Confidence 8999999999999999999999999999999998655332 2235889999999998 48999999999999999
Q ss_pred EcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec---CCceEEEEeeCCCCCEEEEEe
Q 002801 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT---KANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 646 d~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~---~~~v~~v~~~p~~~~~l~tgs 722 (879)
-+.+|++++.+++|..-|+...|.+ +|+.++++|.||+|++|+..+.+++.+++. ...|++|..-|.+...++++.
T Consensus 334 GlKSGK~LKEfrGHsSyvn~a~ft~-dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCN 412 (508)
T KOG0275|consen 334 GLKSGKCLKEFRGHSSYVNEATFTD-DGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCN 412 (508)
T ss_pred ccccchhHHHhcCccccccceEEcC-CCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEc
Confidence 9999999999999999999999999 999999999999999999999999999985 445999999999889999999
Q ss_pred CCCeEEEEEcCCCceeeEEEcc-C--CCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEE
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIG-H--NKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 798 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~-h--~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~ 798 (879)
..++|+|.++... .+.++.. . .+..-+...+ .|+++.+.+.|+.++.|.+.++ ..-+++.-|...+..
T Consensus 413 rsntv~imn~qGQ--vVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG------~LE~tl~VhEkdvIG 484 (508)
T KOG0275|consen 413 RSNTVYIMNMQGQ--VVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSG------KLERTLPVHEKDVIG 484 (508)
T ss_pred CCCeEEEEeccce--EEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecC------ceeeeeecccccccc
Confidence 9999999998643 2666642 2 2344444555 9999999999999999999998 667888899999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEe
Q 002801 799 VGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 799 v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
++.+|..+.||+-++||.+++|.
T Consensus 485 l~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 485 LTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cccCcccchhhhhcccchhhhcC
Confidence 99999999999999999999994
|
|
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-32 Score=282.97 Aligned_cols=209 Identities=19% Similarity=0.208 Sum_probs=160.0
Q ss_pred eecccccccCCCCCCccccc-c-cccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 31 ELTHGDHLRNQGGLSGVCEN-E-AAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
.+....|+|+|......... + .....-+||||+ .-+|.+.++. .+..++.-+++-+..||++||.|||+.||+|
T Consensus 70 im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleym-P~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcH 148 (364)
T KOG0658|consen 70 IMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYM-PETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICH 148 (364)
T ss_pred HHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhc-hHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCccc
Confidence 34467788886654422221 1 233456899999 5689998863 3467899999999999999999999999999
Q ss_pred ccCCCcceeeccC-CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 106 HNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 106 rDlKP~NIll~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|||||+|+|++.+ |.+||||||.|+.+...+
T Consensus 149 RDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e------------------------------------------------ 180 (364)
T KOG0658|consen 149 RDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE------------------------------------------------ 180 (364)
T ss_pred CCCChheEEEcCCCCeEEeccCCcceeeccCC------------------------------------------------
Confidence 9999999999976 899999999998752220
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ 263 (879)
......-|..|+|||.+.|.. |+++.||||.||++.
T Consensus 181 -------------------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~a 217 (364)
T KOG0658|consen 181 -------------------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMA 217 (364)
T ss_pred -------------------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHH
Confidence 013357799999999999976 999999999999999
Q ss_pred Hhhc--CCCCChhhHhHHhhhccc-------------------CCC----c-----hhhccChhhHHHHHHhcCCCCCCC
Q 002801 264 ELFC--PFSTGEEKTRTMSSLRHR-------------------VLP----P-----QLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 264 ell~--pf~~~~~~~~~~~~~~~~-------------------~~~----~-----~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
||+- |.+.++.....+..+..- .+| . ......+++.+|+.++|..+|.+|
T Consensus 218 ELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R 297 (364)
T KOG0658|consen 218 ELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKR 297 (364)
T ss_pred HHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhc
Confidence 9998 777665443333222110 001 0 223456788999999999999999
Q ss_pred CCHHHHhhcccccCCcCc
Q 002801 314 PKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 314 pt~~evl~hp~~~~~~~~ 331 (879)
.++.|++.||||+++..+
T Consensus 298 ~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 298 LSALEALAHPFFDELRDP 315 (364)
T ss_pred CCHHHHhcchhhHHhhCc
Confidence 999999999999987655
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-32 Score=297.76 Aligned_cols=200 Identities=15% Similarity=0.091 Sum_probs=161.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+.||+|.+++.+. ..+++..+..++.||+.||+|||++||+||||||
T Consensus 84 ~l~~l~hp~Iv~~~~-~~~~--~~~~~lv~Ey~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp 159 (340)
T PTZ00426 84 ILNYINHPFCVNLYG-SFKD--ESYLYLVLEFVIGGEFFTFLRRN-KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKP 159 (340)
T ss_pred HHHhCCCCCCcceEE-EEEe--CCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCH
Confidence 445567888888776 5543 34689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.....
T Consensus 160 ~NILl~~~~~ikL~DFG~a~~~~~~------------------------------------------------------- 184 (340)
T PTZ00426 160 ENLLLDKDGFIKMTDFGFAKVVDTR------------------------------------------------------- 184 (340)
T ss_pred HHEEECCCCCEEEecCCCCeecCCC-------------------------------------------------------
Confidence 9999999999999999998653110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+||+.|||||++.+..++.++|||||||+||||++
T Consensus 185 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~ 226 (340)
T PTZ00426 185 --------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCP 226 (340)
T ss_pred --------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCC
Confidence 012478999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||................... +...++.+.+++.+||..||.+|+ +++++++||||....
T Consensus 227 Pf~~~~~~~~~~~i~~~~~~~--p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 227 PFYANEPLLIYQKILEGIIYF--PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred CCCCCCHHHHHHHHhcCCCCC--CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCC
Confidence 776554433333333222222 223457789999999999999995 899999999998754
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8e-32 Score=283.69 Aligned_cols=228 Identities=17% Similarity=0.219 Sum_probs=178.2
Q ss_pred ccccccccccccCCC-------CCcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC
Q 002801 4 RLLRGERFGVRGDDS-------NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK 76 (879)
Q Consensus 4 ~~~~~~~~~~~~~~~-------~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~ 76 (879)
.+..|+.++|+-.+. ....|.+.+.+ .-..|+|+|.+|. |- +.+..+|||+|+-+||+|++||-+..
T Consensus 39 HVFTGekVAVKviDKTKlD~~st~hlfqEVRCM---KLVQHpNiVRLYE-Vi--DTQTKlyLiLELGD~GDl~DyImKHe 112 (864)
T KOG4717|consen 39 HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCM---KLVQHPNIVRLYE-VI--DTQTKLYLILELGDGGDLFDYIMKHE 112 (864)
T ss_pred hhcccceeEEEEecccccchhhhhHHHHHHHHH---HHhcCcCeeeeee-hh--cccceEEEEEEecCCchHHHHHHhhh
Confidence 356788888864322 22344444443 2346788888887 43 35667999999999999999997777
Q ss_pred CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee-ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCC
Q 002801 77 RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (879)
Q Consensus 77 ~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll-~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (879)
..+++..+++||+||+.|+.|+|...||||||||+|+++ ..-|.||++|||++..+.+.
T Consensus 113 ~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG-------------------- 172 (864)
T KOG4717|consen 113 EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG-------------------- 172 (864)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc--------------------
Confidence 789999999999999999999999999999999999876 56799999999998654211
Q ss_pred cchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccc
Q 002801 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (879)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt 235 (879)
.+.+..||+
T Consensus 173 -----------------------------------------------------------------------~kL~TsCGS 181 (864)
T KOG4717|consen 173 -----------------------------------------------------------------------KKLTTSCGS 181 (864)
T ss_pred -----------------------------------------------------------------------chhhcccch
Confidence 123557999
Q ss_pred cceeccccccCCCCC-ccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCC
Q 002801 236 NWYASPEELAGAPVS-CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 236 ~~Y~aPE~~~~~~~~-~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
..|-|||++.|..|+ +++||||||||||-|+| ||...++.+..-.++.-.. ..+...+.++++||..||..||.
T Consensus 182 LAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKY--tvPshvS~eCrdLI~sMLvRdPk 259 (864)
T KOG4717|consen 182 LAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKY--TVPSHVSKECRDLIQSMLVRDPK 259 (864)
T ss_pred hhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccc--cCchhhhHHHHHHHHHHHhcCch
Confidence 999999999999985 57999999999999999 8866555444433333222 22234568899999999999999
Q ss_pred CCCCHHHHhhcccccCCcC
Q 002801 312 GRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 312 ~Rpt~~evl~hp~~~~~~~ 330 (879)
+|.+.+||..++|++....
T Consensus 260 kRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 260 KRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred hhccHHHHhccccccCCCC
Confidence 9999999999999986543
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-32 Score=296.50 Aligned_cols=199 Identities=15% Similarity=0.131 Sum_probs=160.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+.|++|.+++.+. +.+++..+..++.||+.||+|||++||+||||||
T Consensus 71 ~l~~l~hp~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp 146 (329)
T PTZ00263 71 ILMELSHPFIVNMMC-SFQD--ENRVYFLLEFVVGGELFTHLRKA-GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKP 146 (329)
T ss_pred HHHhCCCCCCCcEEE-EEEc--CCEEEEEEcCCCCChHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCH
Confidence 345568888888777 4443 34689999999999999999654 5689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.....
T Consensus 147 ~NIll~~~~~~kl~Dfg~~~~~~~~------------------------------------------------------- 171 (329)
T PTZ00263 147 ENLLLDNKGHVKVTDFGFAKKVPDR------------------------------------------------------- 171 (329)
T ss_pred HHEEECCCCCEEEeeccCceEcCCC-------------------------------------------------------
Confidence 9999999999999999998653110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....||+.|+|||++.+..++.++|||||||+||||++
T Consensus 172 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~ 213 (329)
T PTZ00263 172 --------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYP 213 (329)
T ss_pred --------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCC
Confidence 012478999999999999889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~ 328 (879)
||....... ....+..... +.+...++.+.+||.+||..||.+||+ +++++.||||...
T Consensus 214 pf~~~~~~~-~~~~i~~~~~-~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 214 PFFDDTPFR-IYEKILAGRL-KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred CCCCCCHHH-HHHHHhcCCc-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 776544333 3333333222 222235577899999999999999987 7999999999863
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=243.52 Aligned_cols=287 Identities=15% Similarity=0.246 Sum_probs=252.5
Q ss_pred cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCC
Q 002801 561 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (879)
Q Consensus 561 ~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg 640 (879)
...+.+|...|.+|+|+-+|..+|+|+.|+++++|++... .........+|.+.|-.++|+|...+.+++++.|.
T Consensus 13 ~r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~-----r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk 87 (313)
T KOG1407|consen 13 RRELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERD-----RFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDK 87 (313)
T ss_pred hHHhhhhhhcceEEEEcccCceeeecccCCceEEEEecch-----hhhhhhcccCCCcchhhheeCCCCCcceEEecCCc
Confidence 3456689999999999999999999999999999998864 12223344568889999999999899999999999
Q ss_pred cEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEE
Q 002801 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 641 ~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~t 720 (879)
+|++||+..+++...+....+.| -+.|+| ++++++.|+.|..|...|.++.+.+...+.+-.+.-++|+-+ +++++.
T Consensus 88 ~ir~wd~r~~k~~~~i~~~~eni-~i~wsp-~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~-nd~Ffl 164 (313)
T KOG1407|consen 88 TIRIWDIRSGKCTARIETKGENI-NITWSP-DGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNS-NDLFFL 164 (313)
T ss_pred eEEEEEeccCcEEEEeeccCcce-EEEEcC-CCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCC-CCEEEE
Confidence 99999999999998886555554 478999 999999999999999999999999988888888999999955 677777
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV 799 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v 799 (879)
.+..|+|.|..-...+ |+..+++|.....||.|. +|++||+|+.|..+.+||+... .|++.+..+.-+|..+
T Consensus 165 t~GlG~v~ILsypsLk-pv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~EL------iC~R~isRldwpVRTl 237 (313)
T KOG1407|consen 165 TNGLGCVEILSYPSLK-PVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDEL------ICERCISRLDWPVRTL 237 (313)
T ss_pred ecCCceEEEEeccccc-cccccccCCcceEEEEECCCCceEeeccccceeeccChhHh------hhheeeccccCceEEE
Confidence 7778999999988777 699999999999999999 9999999999999999999986 8999999999999999
Q ss_pred EEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCC---------
Q 002801 800 GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSS--------- 870 (879)
Q Consensus 800 ~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~D--------- 870 (879)
.||-+|++||+||+|..|-|=++.++..+..+. +.++...|+|+|+.. +||-+++|
T Consensus 238 SFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~--------------~~~~t~tVAWHPk~~-LLAyA~ddk~~d~~rea 302 (313)
T KOG1407|consen 238 SFSHDGRMLASASEDHFIDIAEVETGDRVWEIP--------------CEGPTFTVAWHPKRP-LLAYACDDKDGDSNREA 302 (313)
T ss_pred EeccCcceeeccCccceEEeEecccCCeEEEee--------------ccCCceeEEecCCCc-eeeEEecCCCCcccccc
Confidence 999999999999999999999999988877654 456789999999999 99988776
Q ss_pred CcEEEEE
Q 002801 871 GNIKILE 877 (879)
Q Consensus 871 g~I~vw~ 877 (879)
|++|+|-
T Consensus 303 g~vKiFG 309 (313)
T KOG1407|consen 303 GTVKIFG 309 (313)
T ss_pred ceeEEec
Confidence 6777764
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=267.71 Aligned_cols=291 Identities=18% Similarity=0.316 Sum_probs=235.7
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.+.+|+..|.+++++|.|..|++|+.|-+|++||++........ +..+.......|.++.|++. ++.|++.+....+
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~--fr~l~P~E~h~i~sl~ys~T-g~~iLvvsg~aqa 238 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRS--FRQLQPCETHQINSLQYSVT-GDQILVVSGSAQA 238 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchh--hhccCcccccccceeeecCC-CCeEEEEecCcce
Confidence 35689999999999999999999999999999999874333222 33334445668999999995 8888877778999
Q ss_pred EEEEcCCCeEEEE------------eccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc-eEEEEec------CC
Q 002801 643 QVWDVSRSQVLTE------------MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV-SIGTIKT------KA 703 (879)
Q Consensus 643 ~vwd~~~~~~~~~------------~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~-~i~~~~~------~~ 703 (879)
+|+|-...+.+.. .++|...++|.+|+|.+...|+|++.||+++|||++..+ ....|++ .-
T Consensus 239 kl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv 318 (641)
T KOG0772|consen 239 KLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRV 318 (641)
T ss_pred eEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCccc
Confidence 9999765444333 257999999999999888999999999999999997653 4445554 23
Q ss_pred ceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc--eeeEEEccCCC--CEEEEEEc-CCCEEEEEEcCCcEEEEecCCCc
Q 002801 704 NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNK--TVSYVKFV-DATTLVSASTDNTLKLWDLSMCT 778 (879)
Q Consensus 704 ~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~--~~~~~~~~h~~--~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~ 778 (879)
++++++|+|+ +++||+|+.||.|.+||.++.. ...+.-.+|.. .|++|.|+ +|++|+|-+.|+++++||++..
T Consensus 319 ~~tsC~~nrd-g~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~- 396 (641)
T KOG0772|consen 319 PVTSCAWNRD-GKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQF- 396 (641)
T ss_pred CceeeecCCC-cchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccc-
Confidence 4899999999 8899999999999999987653 22455568877 89999999 9999999999999999999987
Q ss_pred ccccCCceEEEeCCCC--cEEEEEEecCCCEEEEEeC------CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002801 779 SRVIDTPLHSFTGHTN--VKNFVGLSVWDGYVATGSE------TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 779 ~~~~~~~~~~~~~h~~--~v~~v~~sp~~~~lasgs~------Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
.+++....+-.+ .-+.++|||+.+.|+||.. .|.+++||..+-..++.+.+. ...
T Consensus 397 ----kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~-------------~aS 459 (641)
T KOG0772|consen 397 ----KKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS-------------TAS 459 (641)
T ss_pred ----ccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC-------------Cce
Confidence 467776665433 3467899999999999964 467999998877777776543 334
Q ss_pred EEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 851 ISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
|..+.|+|.-+ .|.+++.||+++||
T Consensus 460 vv~~~WhpkLN-Qi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 460 VVRCLWHPKLN-QIFAGSGDGTAHVY 484 (641)
T ss_pred EEEEeecchhh-heeeecCCCceEEE
Confidence 89999999999 78888999999997
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-31 Score=289.35 Aligned_cols=201 Identities=16% Similarity=0.180 Sum_probs=153.0
Q ss_pred ecccccccCCCCCCcccc---cccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 32 LTHGDHLRNQGGLSGVCE---NEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~---~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+|+|++..++ +|. .+....+|++|||+. ++|.+++... ...+++.+++.++.||+.||+|||++||+|||
T Consensus 58 l~~~~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~d 135 (290)
T cd07862 58 LETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD 135 (290)
T ss_pred hcccCCCCcceEEE-EEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCC
Confidence 34457888887766 543 123446899999996 5899998543 34589999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+||+|||+++......
T Consensus 136 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------------- 164 (290)
T cd07862 136 LKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------------- 164 (290)
T ss_pred CCHHHEEEcCCCCEEEccccceEeccCCc---------------------------------------------------
Confidence 99999999999999999999986531110
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 165 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 204 (290)
T cd07862 165 ----------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 204 (290)
T ss_pred ----------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc
Confidence 0122478999999999988889999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCC--C-----------------------chhhccChhhHHHHHHhcCCCCCCCCCHHHH
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVL--P-----------------------PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~--~-----------------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ev 319 (879)
||............+..... + ......++.+.+|+.+||+.||++|||+.|+
T Consensus 205 g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 284 (290)
T cd07862 205 RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 284 (290)
T ss_pred CCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHH
Confidence 56444332222222111000 0 0112345667899999999999999999999
Q ss_pred hhcccc
Q 002801 320 LQSEFL 325 (879)
Q Consensus 320 l~hp~~ 325 (879)
|+||||
T Consensus 285 l~hp~f 290 (290)
T cd07862 285 LSHPYF 290 (290)
T ss_pred hcCCCC
Confidence 999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=287.11 Aligned_cols=268 Identities=21% Similarity=0.381 Sum_probs=230.3
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+++..++.+++|+..+.+. .+ ...+.+|...|++++|+||++++++|+.|++|+|||+... ........+|
T Consensus 175 ~~~~~~~~i~~~~~~~~~~--~~-~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~------~~~~~~l~gH 245 (456)
T KOG0266|consen 175 AAASSDGLIRIWKLEGIKS--NL-LRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD------GRNLKTLKGH 245 (456)
T ss_pred EEccCCCcEEEeecccccc--hh-hccccccccceeeeEECCCCcEEEEecCCceEEEeeccCC------CeEEEEecCC
Confidence 7788899999999976662 11 1233689999999999999999999999999999998331 1122344589
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc--
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV-- 694 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~-- 694 (879)
...|+|++|+|. ++.+++|+.|++|+|||+.+++++..+.+|...|++++|++ ++++|++++.|+.|+|||+.++.
T Consensus 246 ~~~v~~~~f~p~-g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~-d~~~l~s~s~d~~i~vwd~~~~~~~ 323 (456)
T KOG0266|consen 246 STYVTSVAFSPD-GNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP-DGNLLVSASYDGTIRVWDLETGSKL 323 (456)
T ss_pred CCceEEEEecCC-CCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC-CCCEEEEcCCCccEEEEECCCCcee
Confidence 999999999997 59999999999999999999999999999999999999999 99999999999999999999998
Q ss_pred eEEEEec--CC-ceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEE---EEc-CCCEEEEEEcCC
Q 002801 695 SIGTIKT--KA-NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYV---KFV-DATTLVSASTDN 767 (879)
Q Consensus 695 ~i~~~~~--~~-~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v---~fs-~~~~l~s~s~D~ 767 (879)
++..+.. .. .+++++|+|+ +.++++++.|+.+++||++.... ...+.+|...+.++ .++ .+.++++|+.|+
T Consensus 324 ~~~~~~~~~~~~~~~~~~fsp~-~~~ll~~~~d~~~~~w~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~ 401 (456)
T KOG0266|consen 324 CLKLLSGAENSAPVTSVQFSPN-GKYLLSASLDRTLKLWDLRSGKS-VGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDG 401 (456)
T ss_pred eeecccCCCCCCceeEEEECCC-CcEEEEecCCCeEEEEEccCCcc-eeeecccCCcceeEecccccCCCCeEEEEeCCc
Confidence 4555543 22 5899999999 89999999999999999999885 77888887754333 224 899999999999
Q ss_pred cEEEEecCCCcccccCCceEEEeCC-CCcEEEEEEecCCCEEEEEe--CCCcEEEEecC
Q 002801 768 TLKLWDLSMCTSRVIDTPLHSFTGH-TNVKNFVGLSVWDGYVATGS--ETNEVFVYHKA 823 (879)
Q Consensus 768 ~i~lwd~~~~~~~~~~~~~~~~~~h-~~~v~~v~~sp~~~~lasgs--~Dg~v~vw~~~ 823 (879)
.|.+||+.++ ..+..+.+| ...+..+.++|...++++++ .|+.+++|...
T Consensus 402 ~v~~~~~~s~------~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 402 SVYVWDSSSG------GILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred eEEEEeCCcc------chhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 9999999986 677888999 88899999999999999998 78999999653
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.9e-30 Score=272.36 Aligned_cols=239 Identities=21% Similarity=0.336 Sum_probs=223.2
Q ss_pred cCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCce
Q 002801 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVS 695 (879)
Q Consensus 616 ~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~ 695 (879)
+...|.|+.++|. ..+++++-++|.|.||+.+|...++.+.-..-+|.+..|-. -.+.+++|++|..|+||+.+++..
T Consensus 12 rSdRVKsVd~HPt-ePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfia-RknWiv~GsDD~~IrVfnynt~ek 89 (794)
T KOG0276|consen 12 RSDRVKSVDFHPT-EPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIA-RKNWIVTGSDDMQIRVFNYNTGEK 89 (794)
T ss_pred cCCceeeeecCCC-CceEEEeeecCeeEEEecccceeeeeeeecccchhhheeee-ccceEEEecCCceEEEEeccccee
Confidence 5678999999996 89999999999999999999999999998899999999998 889999999999999999999999
Q ss_pred EEEEecCCc-eEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEE
Q 002801 696 IGTIKTKAN-VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLW 772 (879)
Q Consensus 696 i~~~~~~~~-v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lw 772 (879)
+.+|..|+. |.|++.||. ..+++++|.|-+|++||-.+.-.+..+|.||...|.+|+|+ |.+.++|+|-|++|++|
T Consensus 90 V~~FeAH~DyIR~iavHPt-~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVW 168 (794)
T KOG0276|consen 90 VKTFEAHSDYIRSIAVHPT-LPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVW 168 (794)
T ss_pred eEEeeccccceeeeeecCC-CCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEE
Confidence 999997665 999999999 78999999999999999988876788999999999999998 99999999999999999
Q ss_pred ecCCCcccccCCceEEEeCCCCcEEEEEEecCC--CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD--GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~--~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
.+... .+..++.||...|++|.+-+.| .||+||+.|.+|+|||..+..+++++ .+|.+-
T Consensus 169 slgs~------~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TL-------------eGHt~N 229 (794)
T KOG0276|consen 169 SLGSP------HPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTL-------------EGHTNN 229 (794)
T ss_pred EcCCC------CCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHh-------------hccccc
Confidence 99986 7889999999999999998865 49999999999999999998887765 478899
Q ss_pred EEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 851 ISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|+.++|+|.-+ +++||+.||++|||.
T Consensus 230 vs~v~fhp~lp-iiisgsEDGTvriWh 255 (794)
T KOG0276|consen 230 VSFVFFHPELP-IIISGSEDGTVRIWN 255 (794)
T ss_pred ceEEEecCCCc-EEEEecCCccEEEec
Confidence 99999999999 999999999999996
|
|
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=291.84 Aligned_cols=199 Identities=17% Similarity=0.215 Sum_probs=158.7
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ ++. ....+|+||||++|++|.+++.+. +.+++.+++.++.||+.||+|||++||+||||||+|||
T Consensus 53 ~~h~~iv~~~~-~~~--~~~~~~iv~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIl 128 (320)
T cd05590 53 RNHPFLTQLYC-CFQ--TPDRLFFVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVL 128 (320)
T ss_pred cCCCchhceee-EEE--cCCEEEEEEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeE
Confidence 36888887776 333 344689999999999999999654 56899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++.......
T Consensus 129 i~~~~~~kL~DfG~~~~~~~~~~--------------------------------------------------------- 151 (320)
T cd05590 129 LDHEGHCKLADFGMCKEGIFNGK--------------------------------------------------------- 151 (320)
T ss_pred ECCCCcEEEeeCCCCeecCcCCC---------------------------------------------------------
Confidence 99999999999999864211000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (320)
T cd05590 152 ---------------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA 198 (320)
T ss_pred ---------------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCC
Confidence 0122478999999999998889999999999999999999 7765
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH------HHHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~------~evl~hp~~~~~~ 329 (879)
................ .+...++.+.+|+.+||+.||.+||++ +++++||||....
T Consensus 199 ~~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~ 260 (320)
T cd05590 199 ENEDDLFEAILNDEVV--YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELD 260 (320)
T ss_pred CCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCC
Confidence 5443333333222222 222356788999999999999999998 9999999998653
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-31 Score=292.86 Aligned_cols=203 Identities=18% Similarity=0.189 Sum_probs=160.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|+||||++|++|..++.+. ..+++..++.++.||+.||+|||++||+||||||
T Consensus 48 ~l~~l~hp~i~~~~~-~~~~--~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp 123 (323)
T cd05595 48 VLQNTRHPFLTALKY-AFQT--HDRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 123 (323)
T ss_pred HHHhCCCCCCcceee-EEec--CCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCH
Confidence 445567888877665 3433 34689999999999999998554 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 124 ~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------------------- 150 (323)
T cd05595 124 ENLMLDKDGHIKITDFGLCKEGISDGA----------------------------------------------------- 150 (323)
T ss_pred HHEEEcCCCCEEecccHHhccccCCCC-----------------------------------------------------
Confidence 999999999999999999864211100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 151 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~ 193 (323)
T cd05595 151 -------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193 (323)
T ss_pred -------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCC
Confidence 0012478999999999999899999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||.................. .+...++.+.+||.+||..||.+|| ++.++++||||....
T Consensus 194 Pf~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~ 258 (323)
T cd05595 194 PFYNQDHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258 (323)
T ss_pred CCCCCCHHHHHHHHhcCCCC--CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCC
Confidence 88655433332222222211 2234568899999999999999998 899999999998753
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-31 Score=293.14 Aligned_cols=202 Identities=18% Similarity=0.173 Sum_probs=159.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .....|+||||++|++|..++... +.+++.+++.++.||+.||+|||++||+||||||
T Consensus 48 ~l~~l~hp~iv~~~~-~~~--~~~~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp 123 (328)
T cd05593 48 VLKNTRHPFLTSLKY-SFQ--TKDRLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKL 123 (328)
T ss_pred HHHhCCCCCCcceEE-EEE--cCCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCH
Confidence 445567888877665 333 334689999999999999998554 5689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 124 ~NIll~~~~~~kL~DfG~~~~~~~~~~----------------------------------------------------- 150 (328)
T cd05593 124 ENLMLDKDGHIKITDFGLCKEGITDAA----------------------------------------------------- 150 (328)
T ss_pred HHeEECCCCcEEEecCcCCccCCCccc-----------------------------------------------------
Confidence 999999999999999999864211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 151 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~ 193 (328)
T cd05593 151 -------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193 (328)
T ss_pred -------------------------------------ccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCC
Confidence 0122478999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~ 328 (879)
||................. +.+...++.+.+||.+||.+||.+|| ++.++++||||...
T Consensus 194 Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 194 PFYNQDHEKLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred CCCCCCHHHHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 7765443322222222221 22234567899999999999999997 89999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-31 Score=263.16 Aligned_cols=273 Identities=18% Similarity=0.335 Sum_probs=230.3
Q ss_pred cccccCCCCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCc
Q 002801 526 EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR 605 (879)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~ 605 (879)
..|+++. .++|..|++|++||..+..+.+. +.||++.|.|+.|+ .+.+++|+.|.+|+|||++++.....
T Consensus 203 lQYDD~k---iVSGlrDnTikiWD~n~~~c~~~-----L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~t 272 (499)
T KOG0281|consen 203 LQYDDEK---IVSGLRDNTIKIWDKNSLECLKI-----LTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNT 272 (499)
T ss_pred EEecchh---hhcccccCceEEeccccHHHHHh-----hhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhH
Confidence 3444442 37899999999999887766544 56999999999996 56999999999999999998655443
Q ss_pred ccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe---EEEEeccCCCcEEEEEEecCCCCEEEEEeCC
Q 002801 606 DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ---VLTEMREHERRVWSIDFSSADPTLLASGSDD 682 (879)
Q Consensus 606 ~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~---~~~~~~~h~~~v~sv~~sp~~~~~lasgs~D 682 (879)
. +.|...|..+.|+ ..++++++.|.++.|||+.... +.+.+.+|...|+.|+|+ .++++++|.|
T Consensus 273 l-------ihHceaVLhlrf~---ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd---~kyIVsASgD 339 (499)
T KOG0281|consen 273 L-------IHHCEAVLHLRFS---NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD---DKYIVSASGD 339 (499)
T ss_pred H-------hhhcceeEEEEEe---CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc---cceEEEecCC
Confidence 3 4578899999997 6899999999999999997654 334567999999999996 4699999999
Q ss_pred CcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEE
Q 002801 683 GSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLV 761 (879)
Q Consensus 683 g~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~ 761 (879)
.+|++|++.+++.+.++.. +..|.|+++. ++++++||.|.+|++||+..+.. +..+.||..-|.++.| +.+.++
T Consensus 340 RTikvW~~st~efvRtl~gHkRGIAClQYr---~rlvVSGSSDntIRlwdi~~G~c-LRvLeGHEeLvRciRF-d~krIV 414 (499)
T KOG0281|consen 340 RTIKVWSTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF-DNKRIV 414 (499)
T ss_pred ceEEEEeccceeeehhhhcccccceehhcc---CeEEEecCCCceEEEEeccccHH-HHHHhchHHhhhheee-cCceee
Confidence 9999999999999999985 4569999886 78999999999999999999984 8999999999999999 577899
Q ss_pred EEEcCCcEEEEecCCCccc---ccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCc
Q 002801 762 SASTDNTLKLWDLSMCTSR---VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828 (879)
Q Consensus 762 s~s~D~~i~lwd~~~~~~~---~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 828 (879)
||..||+|++||+...... ...-|+.++..|++.|..+.| |.-.|++++.|.+|-|||...+-+-
T Consensus 415 SGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 415 SGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred eccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCcc
Confidence 9999999999999886432 112367778889999999998 4678999999999999998765443
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=290.66 Aligned_cols=209 Identities=16% Similarity=0.185 Sum_probs=156.2
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..++ ++.+ ....|+||||+. ++|.+++.+....+++.+++.++.||+.||+|||++||+|||
T Consensus 53 E~~~l~~l~h~niv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 128 (303)
T cd07869 53 EASLLKGLKHANIVLLHD-IIHT--KETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRD 128 (303)
T ss_pred HHHHHhhCCCCCcCeEEE-EEec--CCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 333455668888887766 4443 346899999995 688888866556789999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+||+|||+++.......
T Consensus 129 lkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------------------------------------------------- 158 (303)
T cd07869 129 LKPQNLLISDTGELKLADFGLARAKSVPSH-------------------------------------------------- 158 (303)
T ss_pred CCHHHEEECCCCCEEECCCCcceeccCCCc--------------------------------------------------
Confidence 999999999999999999999864311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell 266 (879)
......||+.|+|||++.+. .++.++|||||||+||||+
T Consensus 159 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~ 198 (303)
T cd07869 159 ----------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI 198 (303)
T ss_pred ----------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence 00123679999999998764 4899999999999999999
Q ss_pred c---CCCCChhhHhHHhhhcc---c--------------C--------CCchh------hccChhhHHHHHHhcCCCCCC
Q 002801 267 C---PFSTGEEKTRTMSSLRH---R--------------V--------LPPQL------LLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~---~--------------~--------~~~~~------~~~~~~~~~li~~~L~~dP~~ 312 (879)
+ ||............+.. . . .+... ...++.+.+|+.+||+.||++
T Consensus 199 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~ 278 (303)
T cd07869 199 QGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKN 278 (303)
T ss_pred hCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchh
Confidence 9 77554322221111100 0 0 00000 012356789999999999999
Q ss_pred CCCHHHHhhcccccCCcC
Q 002801 313 RPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~~ 330 (879)
|||+.|+++||||+....
T Consensus 279 R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 279 RLSAQAALSHEYFSDLPP 296 (303)
T ss_pred ccCHHHHhcCcccccCCh
Confidence 999999999999987654
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=287.36 Aligned_cols=202 Identities=15% Similarity=0.175 Sum_probs=153.0
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|+|++..++ ++.+ ....|++|||+.| +|.+++......+++.+++.+++||+.||+|||++||+|||||
T Consensus 55 ~~l~~l~h~niv~~~~-~~~~--~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk 130 (288)
T cd07871 55 SLLKNLKHANIVTLHD-IIHT--ERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLK 130 (288)
T ss_pred HHHHhCCCCCEeeEEE-EEcC--CCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 3455667888887766 4433 3468999999975 9999996655568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+|++|||+++.......
T Consensus 131 p~Nil~~~~~~~kl~DfG~~~~~~~~~~---------------------------------------------------- 158 (288)
T cd07871 131 PQNLLINEKGELKLADFGLARAKSVPTK---------------------------------------------------- 158 (288)
T ss_pred HHHEEECCCCCEEECcCcceeeccCCCc----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~- 267 (879)
......||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g 200 (288)
T cd07871 159 --------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATG 200 (288)
T ss_pred --------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhC
Confidence 0012367899999999876 458999999999999999999
Q ss_pred --CCCCChhhHhHHhhhc--cc------------------CCCc--------hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 --PFSTGEEKTRTMSSLR--HR------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~--~~------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.............. .. ..+. .....++++.+||.+||.+||.+|||++
T Consensus 201 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~ 280 (288)
T cd07871 201 RPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAE 280 (288)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHH
Confidence 6654433222211110 00 0000 0123456788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
|+++||||
T Consensus 281 ~~l~hp~f 288 (288)
T cd07871 281 AALRHSYF 288 (288)
T ss_pred HHhcCCCC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=276.88 Aligned_cols=271 Identities=18% Similarity=0.302 Sum_probs=233.9
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
.-++.+.....+++++..+..+. -+.||...|.+++...+|.+||||++|+++.+|.++.... ........
T Consensus 337 ~~laVATNs~~lr~y~~~~~~c~------ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~---~~~~~a~~ 407 (775)
T KOG0319|consen 337 SHLAVATNSPELRLYTLPTSYCQ------IIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCS---KSLCVAQA 407 (775)
T ss_pred ceEEEEeCCCceEEEecCCCceE------EEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcc---hhhhhhhh
Confidence 33456677788888877776554 3459999999999777889999999999999998843211 11112233
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeE-----EE----EeccCCCcEEEEEEecCCCCEEEEEeCCCc
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQV-----LT----EMREHERRVWSIDFSSADPTLLASGSDDGS 684 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~-----~~----~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~ 684 (879)
.+|...|.+++++......+++++.|+++++|++...+. .. ....|.+.|++|+++| +..++||||.|.+
T Consensus 408 ~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~-ndkLiAT~SqDkt 486 (775)
T KOG0319|consen 408 NGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAP-NDKLIATGSQDKT 486 (775)
T ss_pred cccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecC-CCceEEecccccc
Confidence 568999999999887789999999999999999976221 11 2246999999999999 8899999999999
Q ss_pred EEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEE
Q 002801 685 VKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVS 762 (879)
Q Consensus 685 V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s 762 (879)
++||++.+...+.++.. ...|.||.|+|. ...++|+|.|.+|+||.+.+..+ +.+|.||..+|..+.|. +++.|+|
T Consensus 487 aKiW~le~~~l~~vLsGH~RGvw~V~Fs~~-dq~laT~SgD~TvKIW~is~fSC-lkT~eGH~~aVlra~F~~~~~qliS 564 (775)
T KOG0319|consen 487 AKIWDLEQLRLLGVLSGHTRGVWCVSFSKN-DQLLATCSGDKTVKIWSISTFSC-LKTFEGHTSAVLRASFIRNGKQLIS 564 (775)
T ss_pred eeeecccCceEEEEeeCCccceEEEEeccc-cceeEeccCCceEEEEEecccee-eeeecCccceeEeeeeeeCCcEEEe
Confidence 99999999999999985 456999999999 78999999999999999999884 99999999999999998 9999999
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
++.||.|++|++++. .|+.++-.|.+.|+.++-++.+.+++||+.||.|.+|.=
T Consensus 565 ~~adGliKlWnikt~------eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD 618 (775)
T KOG0319|consen 565 AGADGLIKLWNIKTN------ECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKD 618 (775)
T ss_pred ccCCCcEEEEeccch------hhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeec
Confidence 999999999999997 899999999999999999999999999999999999964
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.3e-31 Score=285.81 Aligned_cols=205 Identities=13% Similarity=0.121 Sum_probs=159.0
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
..+.+.+|++++..+. .+.+ ....|++|||+.+++|..++.. ....+++..++.++.||+.||+|||++||+||||
T Consensus 52 ~il~~l~~~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~di 128 (285)
T cd05631 52 RILEKVNSRFVVSLAY-AYET--KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDL 128 (285)
T ss_pred HHHHhcCCCcEEEEEE-EEcc--CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCC
Confidence 3455667777777665 3433 3468999999999999988743 3346899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+|||++.++.+||+|||++.......
T Consensus 129 kp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 156 (285)
T cd05631 129 KPENILLDDRGHIRISDLGLAVQIPEGE---------------------------------------------------- 156 (285)
T ss_pred CHHHEEECCCCCEEEeeCCCcEEcCCCC----------------------------------------------------
Confidence 9999999999999999999986531100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....+||..|+|||++.+..++.++|||||||+||||++
T Consensus 157 ---------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g 197 (285)
T cd05631 157 ---------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQG 197 (285)
T ss_pred ---------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhC
Confidence 0012378999999999999899999999999999999999
Q ss_pred --CCCCChhhH---hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCc
Q 002801 268 --PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 --pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~ 329 (879)
||....... .....+. ....+.....++.+.+|+.+||..||.+||+ ++++++||||....
T Consensus 198 ~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 198 QSPFRKRKERVKREEVDRRVK-EDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred CCCCCCCCcchhHHHHHHHhh-cccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 776543221 1111111 1112233345678899999999999999997 89999999998765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=302.85 Aligned_cols=213 Identities=19% Similarity=0.211 Sum_probs=163.2
Q ss_pred CceeecccccccCCCCCCccccc-----ccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhh
Q 002801 28 DGVELTHGDHLRNQGGLSGVCEN-----EAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
+...+...+|++++......... +.....++||||+.+|+|.++|+. ....+++.++..|+.||+.||.|||
T Consensus 81 Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH 160 (496)
T PTZ00283 81 EVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH 160 (496)
T ss_pred HHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33344556777777654421111 111236899999999999999843 2356899999999999999999999
Q ss_pred hcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCc
Q 002801 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 100 s~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
++||+||||||+||||+.++.+||+|||+++.........
T Consensus 161 ~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~---------------------------------------- 200 (496)
T PTZ00283 161 SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDD---------------------------------------- 200 (496)
T ss_pred hCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccccc----------------------------------------
Confidence 9999999999999999999999999999987642110000
Q ss_pred ccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHH
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (879)
.....+||+.|+|||++.+..++.++||||||
T Consensus 201 ------------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlG 232 (496)
T PTZ00283 201 ------------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKKADMFSLG 232 (496)
T ss_pred ------------------------------------------------ccccccCCcceeCHHHhCCCCCCcHHHHHHHH
Confidence 00224789999999999998999999999999
Q ss_pred HHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 260 vil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
|+||||++ ||...... ..+........++.+...++.+.+++.+||+.||.+||++.++++|||+....
T Consensus 233 vilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~ 304 (496)
T PTZ00283 233 VLLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFI 304 (496)
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhh
Confidence 99999999 77554433 33333333334444556778899999999999999999999999999987543
|
|
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=287.06 Aligned_cols=205 Identities=18% Similarity=0.211 Sum_probs=170.7
Q ss_pred cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhh
Q 002801 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 21 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
..|.+|.. .+....|+++|.+++ ||..+. .+||||||+..|+|.+||+. .+..++..+.+.++.|||+|++||.
T Consensus 246 ~~f~~Ea~--iMk~L~H~~lV~l~g-V~~~~~--piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe 320 (468)
T KOG0197|consen 246 EAFLREAQ--IMKKLRHEKLVKLYG-VCTKQE--PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE 320 (468)
T ss_pred hHHHHHHH--HHHhCcccCeEEEEE-EEecCC--ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH
Confidence 45665544 345567888888777 887644 58999999999999999976 5678999999999999999999999
Q ss_pred hcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCc
Q 002801 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 100 s~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
++++|||||...|||++.++.+||+|||+|+..+.+....
T Consensus 321 s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~---------------------------------------- 360 (468)
T KOG0197|consen 321 SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA---------------------------------------- 360 (468)
T ss_pred hCCccchhhhhhheeeccCceEEEcccccccccCCCceee----------------------------------------
Confidence 9999999999999999999999999999999543332210
Q ss_pred ccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHH
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (879)
.....| ...|+|||.+..+.++.+|||||||
T Consensus 361 ----------------------------------------~~~~kf---------PIkWtAPEa~~~~~FS~kSDVWSFG 391 (468)
T KOG0197|consen 361 ----------------------------------------SEGGKF---------PIKWTAPEALNYGKFSSKSDVWSFG 391 (468)
T ss_pred ----------------------------------------cCCCCC---------CceecCHHHHhhCCcccccceeehh
Confidence 000111 2248899999999999999999999
Q ss_pred HHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 260 vil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
|+||||+| || ...........+..+..-|.+..+++.+.+++..||+.+|++|||++.+.
T Consensus 392 VlL~E~fT~G~~py-~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 392 VLLWELFTYGRVPY-PGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred hhHHHHhccCCCCC-CCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 99999999 55 66777788888888888888889999999999999999999999998553
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=266.72 Aligned_cols=288 Identities=19% Similarity=0.287 Sum_probs=239.9
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+-.|.+.|..+.|-++...|+|||.|..|++|+......+. + -...+..+.|+.+.|.+. +.+++++++|+.++
T Consensus 171 ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~---~--~tLaGs~g~it~~d~d~~-~~~~iAas~d~~~r 244 (459)
T KOG0288|consen 171 LDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSEL---I--STLAGSLGNITSIDFDSD-NKHVIAASNDKNLR 244 (459)
T ss_pred hhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhh---h--hhhhccCCCcceeeecCC-CceEEeecCCCcee
Confidence 34788999999999999999999999999999987632111 1 111245678999999985 88888888999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeC
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~ 723 (879)
+|++...+...++.+|+..|+++.|.. ....+++|+.|.+|++||+....+.+++-..+.+..|..++ ..+++|..
T Consensus 245 ~Wnvd~~r~~~TLsGHtdkVt~ak~~~-~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~---~~~~SgH~ 320 (459)
T KOG0288|consen 245 LWNVDSLRLRHTLSGHTDKVTAAKFKL-SHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSI---SDVISGHF 320 (459)
T ss_pred eeeccchhhhhhhcccccceeeehhhc-cccceeeccccchhhhhhhhhhheeccccccccccceEecc---eeeeeccc
Confidence 999999999999999999999999987 55569999999999999999999999988888888888873 47899999
Q ss_pred CCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEe
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802 (879)
Q Consensus 724 d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 802 (879)
|++|++||.|.... ......+. .|+++..+ ++..|++++.|.++.+.|+++..............+| ..+.+.||
T Consensus 321 DkkvRfwD~Rs~~~-~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~as--DwtrvvfS 396 (459)
T KOG0288|consen 321 DKKVRFWDIRSADK-TRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCAS--DWTRVVFS 396 (459)
T ss_pred ccceEEEeccCCce-eeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccccccc--ccceeEEC
Confidence 99999999999884 77777665 89999999 9999999999999999999997432111111122223 37889999
Q ss_pred cCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|++.|+|+||.||.|+||++.+++........+.. ..|++++|+|.|. .|++++.++.+.+|.
T Consensus 397 pd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~-----------~aI~s~~W~~sG~-~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 397 PDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSN-----------AAITSLSWNPSGS-GLLSADKQKAVTLWT 459 (459)
T ss_pred CCCceeeeccCCCcEEEEEccCceEEEEeccCCCC-----------cceEEEEEcCCCc-hhhcccCCcceEecC
Confidence 99999999999999999999998877766532221 2699999999999 899999999999994
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-30 Score=270.41 Aligned_cols=268 Identities=19% Similarity=0.256 Sum_probs=234.5
Q ss_pred CCceecccccCceEEEeecC-cEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccce
Q 002801 533 RSGWINPFLEGLCKYLSFSK-LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (879)
Q Consensus 533 ~~~~~~~~~d~~i~~w~~~~-~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~ 611 (879)
..-+|+++.|+.|++|++-. .+++++ +.||..+|.+++|+++|..|++++.|+.|++||++++.. +
T Consensus 227 ~hLlLS~gmD~~vklW~vy~~~~~lrt-----f~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~--------~ 293 (503)
T KOG0282|consen 227 GHLLLSGGMDGLVKLWNVYDDRRCLRT-----FKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQV--------L 293 (503)
T ss_pred eeEEEecCCCceEEEEEEecCcceehh-----hhcchhhhhhhhccccCCeeeeeecceeeeeeccccceE--------E
Confidence 45568999999999999876 666655 459999999999999999999999999999999998643 2
Q ss_pred EEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 002801 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (879)
Q Consensus 612 ~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~ 691 (879)
..+.....+.|+.|+|.+.+.+++|+.|+.|+.||+++++.+.++..|-+.|.++.|-+ ++..+++.++|++++||+.+
T Consensus 294 ~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~-~g~rFissSDdks~riWe~~ 372 (503)
T KOG0282|consen 294 SRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVD-EGRRFISSSDDKSVRIWENR 372 (503)
T ss_pred EEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEcc-CCceEeeeccCccEEEEEcC
Confidence 33456678999999998779999999999999999999999999999999999999999 99999999999999999999
Q ss_pred CCceEEEEecC--CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc--eeeEEEccCCC--CEEEEEEc-CCCEEEEEE
Q 002801 692 QGVSIGTIKTK--ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNK--TVSYVKFV-DATTLVSAS 764 (879)
Q Consensus 692 ~~~~i~~~~~~--~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~--~~~~~~~~h~~--~V~~v~fs-~~~~l~s~s 764 (879)
.+.++..+... -...|+..+|+ +++++.-+.|+.|.||.+...- .....|.||.. .-..+.|+ ||.+|++|+
T Consensus 373 ~~v~ik~i~~~~~hsmP~~~~~P~-~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGd 451 (503)
T KOG0282|consen 373 IPVPIKNIADPEMHTMPCLTLHPN-GKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGD 451 (503)
T ss_pred CCccchhhcchhhccCcceecCCC-CCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeec
Confidence 98887665532 23678999999 8899999999999999976532 22456788864 45778889 999999999
Q ss_pred cCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEe
Q 002801 765 TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYH 821 (879)
Q Consensus 765 ~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~ 821 (879)
.||.+.+||.++. +.+..+++|..++..+.|+|... .+||||.||.|++|+
T Consensus 452 sdG~v~~wdwkt~------kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 452 SDGKVNFWDWKTT------KLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CCccEEEeechhh------hhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 9999999999987 78899999999999999999865 899999999999996
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-31 Score=290.68 Aligned_cols=202 Identities=15% Similarity=0.189 Sum_probs=159.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. ++.+ ....||||||++|++|.+++... ..+++.+++.++.||+.||.|||++||+||||||
T Consensus 54 ~l~~~~h~~iv~~~~-~~~~--~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp 129 (333)
T cd05600 54 ILTTTKSEWLVKLLY-AFQD--DEYLYLAMEYVPGGDFRTLLNNL-GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKP 129 (333)
T ss_pred HHHhCCCCCCccEEE-EEEc--CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence 344556888887776 4433 44689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.....
T Consensus 130 ~Nil~~~~~~~kL~Dfg~a~~~~~~------------------------------------------------------- 154 (333)
T cd05600 130 ENFLIDASGHIKLTDFGLSKGIVTY------------------------------------------------------- 154 (333)
T ss_pred HHEEECCCCCEEEEeCcCCcccccc-------------------------------------------------------
Confidence 9999999999999999998653110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 155 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~ 196 (333)
T cd05600 155 --------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFP 196 (333)
T ss_pred --------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCC
Confidence 022478999999999999999999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchh----hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||.............. .....+.. ...++.+.+|+.+||..+|.+||++.++++||||....
T Consensus 197 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~ 264 (333)
T cd05600 197 PFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVD 264 (333)
T ss_pred CCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCC
Confidence 7754433222221111 11111111 24567889999999999999999999999999998653
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-31 Score=287.86 Aligned_cols=199 Identities=18% Similarity=0.235 Sum_probs=157.1
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ .+. .....|+||||+.|++|..++... ..+++.++..++.||+.||+|||++||+||||||+|||
T Consensus 53 ~~~~~i~~~~~-~~~--~~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil 128 (316)
T cd05620 53 WENPFLTHLYC-TFQ--TKEHLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVM 128 (316)
T ss_pred cCCCCccCeeE-EEE--eCCEEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeE
Confidence 46777777666 333 344789999999999999999654 56899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++......
T Consensus 129 ~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------------- 150 (316)
T cd05620 129 LDRDGHIKIADFGMCKENVFGD---------------------------------------------------------- 150 (316)
T ss_pred ECCCCCEEeCccCCCeecccCC----------------------------------------------------------
Confidence 9999999999999985421000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......+||+.|+|||++.+..++.++|||||||+||||++ ||..
T Consensus 151 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~ 198 (316)
T cd05620 151 --------------------------------NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred --------------------------------CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCC
Confidence 00123478999999999999999999999999999999999 7765
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-HHHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~evl~hp~~~~~~ 329 (879)
.... .....+... .+......++++.+|+.+||+.||.+||++ +++++||||....
T Consensus 199 ~~~~-~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 199 DDED-ELFESIRVD-TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred CCHH-HHHHHHHhC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 4433 222332222 122222356788999999999999999998 5888999998753
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-31 Score=288.41 Aligned_cols=198 Identities=17% Similarity=0.209 Sum_probs=158.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ ++.+ ....|+||||++|++|..++.+. +.+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 54 ~hp~i~~~~~-~~~~--~~~~~lv~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill 129 (321)
T cd05591 54 KHPFLTALHC-CFQT--KDRLFFVMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL 129 (321)
T ss_pred CCCCccceee-EEEc--CCeEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE
Confidence 6777777666 4433 34689999999999999998654 568999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------------------- 151 (321)
T cd05591 130 DAEGHCKLADFGMCKEGILNGV---------------------------------------------------------- 151 (321)
T ss_pred CCCCCEEEeecccceecccCCc----------------------------------------------------------
Confidence 9999999999999864211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
......||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~ 199 (321)
T cd05591 152 --------------------------------TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEAD 199 (321)
T ss_pred --------------------------------cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCC
Confidence 0122478999999999998889999999999999999999 77655
Q ss_pred hhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-------CHHHHhhcccccCCc
Q 002801 273 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEPR 329 (879)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-------t~~evl~hp~~~~~~ 329 (879)
................| ...++.+.+++.+||..||.+|| ++.++++||||....
T Consensus 200 ~~~~~~~~i~~~~~~~p--~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 200 NEDDLFESILHDDVLYP--VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred CHHHHHHHHHcCCCCCC--CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 54443333333332222 23457889999999999999999 899999999997643
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=293.26 Aligned_cols=213 Identities=15% Similarity=0.165 Sum_probs=157.1
Q ss_pred CceeecccccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
+...+...+|++++..++ ++... .....|++|||| +++|.+++... ..+++.+++.++.||+.||+|||++||+
T Consensus 49 E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 49 EIKLLRLLRHPDIVEIKH-IMLPPSRREFKDIYVVFELM-ESDLHQVIKAN-DDLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred HHHHHHhCCCCCEeeecc-eEeccCCCCCceEEEEEecC-CCCHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 333455667888887766 44322 123579999999 46899999654 4689999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+|||++.++.+||+|||+++........
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------- 159 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTPT---------------------------------------------- 159 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccCc----------------------------------------------
Confidence 9999999999999999999999998653111000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCcchhHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLL 262 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvil 262 (879)
.......+||++|+|||++.+ ..++.++|||||||++
T Consensus 160 -----------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl 198 (338)
T cd07859 160 -----------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 198 (338)
T ss_pred -----------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHH
Confidence 000122478999999999876 5689999999999999
Q ss_pred HHhhc---CCCCChhhHhH--H------------------------hhhcccCC---CchhhccChhhHHHHHHhcCCCC
Q 002801 263 FELFC---PFSTGEEKTRT--M------------------------SSLRHRVL---PPQLLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~--~------------------------~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP 310 (879)
|||++ ||......... + ..+..... ...+....+.+.+++.+||..||
T Consensus 199 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 278 (338)
T cd07859 199 AEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDP 278 (338)
T ss_pred HHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCc
Confidence 99999 66433221100 0 00111000 11123345678899999999999
Q ss_pred CCCCCHHHHhhcccccCCcC
Q 002801 311 SGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~~~~~~ 330 (879)
++|||++|+++||||+....
T Consensus 279 ~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 279 KDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred ccCCCHHHHhcCchhhhcCc
Confidence 99999999999999987554
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=304.99 Aligned_cols=207 Identities=18% Similarity=0.195 Sum_probs=165.2
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
...+...+|++++..++ .+.+ ....||||||++||+|.++|+. ...++++.++..++.||+.||+|||++||+|
T Consensus 116 ~~~l~~l~Hpniv~~~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH 192 (478)
T PTZ00267 116 LHCLAACDHFGIVKHFD-DFKS--DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMH 192 (478)
T ss_pred HHHHHhCCCCCEeEEEE-EEEE--CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence 34566778999998887 4443 3468999999999999988742 2356899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+|||++.++.+||+|||+++........
T Consensus 193 rDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~----------------------------------------------- 225 (478)
T PTZ00267 193 RDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL----------------------------------------------- 225 (478)
T ss_pred CCcCHHhEEECCCCcEEEEeCcCceecCCcccc-----------------------------------------------
Confidence 999999999999999999999998754211000
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 226 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el 264 (478)
T PTZ00267 226 -----------------------------------------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYEL 264 (478)
T ss_pred -----------------------------------------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHH
Confidence 001234789999999999998899999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
++ ||...... ..+..+.....++.....++.+.+||.+||.+||++||++.+++.|||+..
T Consensus 265 ~tg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 265 LTLHRPFKGPSQR-EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 99 77654433 333333333344444456788999999999999999999999999999864
|
|
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-31 Score=283.37 Aligned_cols=223 Identities=19% Similarity=0.222 Sum_probs=166.7
Q ss_pred cCCCCCcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHH
Q 002801 15 GDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 94 (879)
Q Consensus 15 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~ 94 (879)
+|.+.-.+|+.|...+.-. ..|.+++-+|+. +-.+..+||||||- ..+|.++|++....++...++.|..|++.|
T Consensus 398 ~D~qtl~gy~nEI~lL~KL-kg~~~IIqL~DY---Ev~d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~a 472 (677)
T KOG0596|consen 398 ADNQTLDGYRNEIALLNKL-KGHDKIIQLYDY---EVTDGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLA 472 (677)
T ss_pred cCHHHHHHHHHHHHHHHHh-cCCceEEEEeee---eccCceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHH
Confidence 3444445677776554333 355777777772 22345689999975 789999998776666666999999999999
Q ss_pred HHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccc
Q 002801 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (879)
Q Consensus 95 l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (879)
|.++|.+||||.||||.||||- .|.+||||||+|+....+...
T Consensus 473 V~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTs------------------------------------ 515 (677)
T KOG0596|consen 473 VKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTS------------------------------------ 515 (677)
T ss_pred HHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccc------------------------------------
Confidence 9999999999999999999985 589999999999876433111
Q ss_pred cCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-------
Q 002801 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------- 247 (879)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------- 247 (879)
+ ....++||+-|||||.+...
T Consensus 516 ----------------------I------------------------------~kdsQvGT~NYMsPEAl~~~~s~~~~~ 543 (677)
T KOG0596|consen 516 ----------------------I------------------------------VKDSQVGTVNYMSPEALTDMSSSRENG 543 (677)
T ss_pred ----------------------e------------------------------eeccccCcccccCHHHHhhccccccCC
Confidence 0 11236999999999998532
Q ss_pred ----CCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 248 ----PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 248 ----~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
..+.+|||||||||||+|+. ||..-.+....+..+... +..|..... .++.+++..||..||.+||++.
T Consensus 544 ~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 544 KSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred CcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCCcH
Confidence 26789999999999999998 886555555555555443 112222221 2388999999999999999999
Q ss_pred HHhhcccccCCcCch
Q 002801 318 ELLQSEFLNEPRDSM 332 (879)
Q Consensus 318 evl~hp~~~~~~~~~ 332 (879)
++|+|||+.....+.
T Consensus 623 eLLqhpFl~~~~i~~ 637 (677)
T KOG0596|consen 623 ELLQHPFLQIQPIPV 637 (677)
T ss_pred HHhcCcccccccccc
Confidence 999999999754443
|
|
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=293.06 Aligned_cols=239 Identities=15% Similarity=0.190 Sum_probs=160.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. .+.+ ....|||||||+||+|.+++.+. +.+++.+++.++.||+.||+|||++||+||||||
T Consensus 54 il~~~~~~~iv~~~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp 129 (363)
T cd05628 54 ILVEADSLWVVKMFY-SFQD--KLNLYLIMEFLPGGDMMTLLMKK-DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKP 129 (363)
T ss_pred HHHhCCCCCcceEEE-EEec--CCeEEEEEcCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCH
Confidence 345567888887776 4433 44689999999999999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++........... +. . .. ....++.....
T Consensus 130 ~NILi~~~~~vkL~DFGla~~~~~~~~~~~~-~~-----~-~~------------~~~~~~~~~~~-------------- 176 (363)
T cd05628 130 DNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY-RN-----L-NH------------SLPSDFTFQNM-------------- 176 (363)
T ss_pred HHeEECCCCCEEEeeccCccccccccccccc-cc-----c-cc------------ccccccccccc--------------
Confidence 9999999999999999999764321100000 00 0 00 00000000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.. ........ ..........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 177 ~~---------------------~~~~~~~~-~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 177 NS---------------------KRKAETWK-RNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred cc---------------------ccccchhh-hccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 00 00000000 000001123589999999999999999999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhcCCCCC---CCCCHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~---~Rpt~~evl~hp~~~~~~ 329 (879)
||.............. .....|.....++.+.+||.+|+. +|. .||+++|+++||||....
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~ 300 (363)
T cd05628 235 PFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD 300 (363)
T ss_pred CCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence 8865544333332222 112122223456788999998765 344 468999999999998754
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-31 Score=292.57 Aligned_cols=203 Identities=18% Similarity=0.190 Sum_probs=159.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
.+...+|++++..+. .+. .....|+||||++|++|..++.+. ..+++.+++.++.||+.||+|||+ +||+|||||
T Consensus 48 ~l~~~~hp~i~~~~~-~~~--~~~~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDik 123 (325)
T cd05594 48 VLQNSRHPFLTALKY-SFQ--THDRLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 123 (325)
T ss_pred HHHhCCCCCCCceEE-EEE--cCCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence 345567888877665 333 234689999999999999998554 468999999999999999999998 799999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+||+|||+++.......
T Consensus 124 p~NIll~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------------- 151 (325)
T cd05594 124 LENLMLDKDGHIKITDFGLCKEGIKDGA---------------------------------------------------- 151 (325)
T ss_pred CCeEEECCCCCEEEecCCCCeecCCCCc----------------------------------------------------
Confidence 9999999999999999999864211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 152 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~ 193 (325)
T cd05594 152 --------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 193 (325)
T ss_pred --------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCC
Confidence 0012478999999999999889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||................. ..+...++.+.+|+.+||..||++|+ ++.++++||||....
T Consensus 194 ~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~ 259 (325)
T cd05594 194 LPFYNQDHEKLFELILMEEI--RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIV 259 (325)
T ss_pred CCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCC
Confidence 7765443322222222211 12234568899999999999999996 899999999998743
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=257.19 Aligned_cols=287 Identities=17% Similarity=0.256 Sum_probs=243.3
Q ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCccccc--ceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHY--PVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 565 ~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~--~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
++..+-+-|..|+|||++|++|++||.|.+|++.++... .+..+ .-..|-+...|.|++|+. +...+|+|+.||.|
T Consensus 210 Fg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlr-KDLkYQAqd~fMMmd~aVlci~FSR-DsEMlAsGsqDGkI 287 (508)
T KOG0275|consen 210 FGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLR-KDLKYQAQDNFMMMDDAVLCISFSR-DSEMLASGSQDGKI 287 (508)
T ss_pred cccccchhheeeCCCCceEeeccccceeeeehhccchhh-hhhhhhhhcceeecccceEEEeecc-cHHHhhccCcCCcE
Confidence 466778889999999999999999999999999875332 12222 223355778999999998 58999999999999
Q ss_pred EEEEcCCCeEEEEec-cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc-eEEEEeeCCCCCEEEE
Q 002801 643 QVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-VCCVQFPLDSGRSLAF 720 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~-~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~-v~~v~~~p~~~~~l~t 720 (879)
+||.+.+|+|++.|. .|++.|+|+.|+. |+..+.+++.|.+|+|.-+.+|++++.+..++. |+.+.|.++ |+++++
T Consensus 288 KvWri~tG~ClRrFdrAHtkGvt~l~FSr-D~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~d-G~~iis 365 (508)
T KOG0275|consen 288 KVWRIETGQCLRRFDRAHTKGVTCLSFSR-DNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDD-GHHIIS 365 (508)
T ss_pred EEEEEecchHHHHhhhhhccCeeEEEEcc-CcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCC-CCeEEE
Confidence 999999999999996 8999999999999 999999999999999999999999999997655 999999999 999999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEc--cCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCC---C
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLI--GHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH---T 793 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~--~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h---~ 793 (879)
++.||+|++|+..+..+ +.+|+ +...+|+.+... +...++.+...++|.|-++.. +.+++|..- .
T Consensus 366 aSsDgtvkvW~~KtteC-~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~qG-------QvVrsfsSGkREg 437 (508)
T KOG0275|consen 366 ASSDGTVKVWHGKTTEC-LSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQG-------QVVRSFSSGKREG 437 (508)
T ss_pred ecCCccEEEecCcchhh-hhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEeccc-------eEEeeeccCCccC
Confidence 99999999999999884 77776 345677777665 788899999999999988874 567777632 2
Q ss_pred CcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcE
Q 002801 794 NVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNI 873 (879)
Q Consensus 794 ~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I 873 (879)
+...+..+||.|+++.|.++|+.++.|.+.+++....+. -|..-|-.++-+|..+ +||+=+.||.+
T Consensus 438 GdFi~~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~-------------VhEkdvIGl~HHPHqN-llAsYsEDgll 503 (508)
T KOG0275|consen 438 GDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLP-------------VHEKDVIGLTHHPHQN-LLASYSEDGLL 503 (508)
T ss_pred CceEEEEecCCCcEEEEEccCcEEEEEEeecCceeeeee-------------cccccccccccCcccc-hhhhhcccchh
Confidence 344566799999999999999999999999887666554 3444588899999999 99999999999
Q ss_pred EEEE
Q 002801 874 KILE 877 (879)
Q Consensus 874 ~vw~ 877 (879)
|+|.
T Consensus 504 KLWk 507 (508)
T KOG0275|consen 504 KLWK 507 (508)
T ss_pred hhcC
Confidence 9995
|
|
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=286.60 Aligned_cols=199 Identities=17% Similarity=0.204 Sum_probs=157.6
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ ++. .....|+||||++|++|..+++.. ..+++.++..|+.||+.||.|||++||+||||||+|||
T Consensus 53 ~~hp~i~~~~~-~~~--~~~~~~lv~e~~~gg~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nil 128 (316)
T cd05592 53 WEHPFLTHLFC-TFQ--TKEHLFFVMEYLNGGDLMFHIQSS-GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVL 128 (316)
T ss_pred cCCCCccceee-EEE--cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeE
Confidence 47888877766 333 334689999999999999999654 46899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++.......
T Consensus 129 l~~~~~~kL~Dfg~a~~~~~~~~--------------------------------------------------------- 151 (316)
T cd05592 129 LDKDGHIKIADFGMCKENMNGEG--------------------------------------------------------- 151 (316)
T ss_pred ECCCCCEEEccCcCCeECCCCCC---------------------------------------------------------
Confidence 99999999999999864211100
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~ 198 (316)
T cd05592 152 ---------------------------------KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred ---------------------------------ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCC
Confidence 0122478999999999999889999999999999999999 8765
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-HHHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-~evl~hp~~~~~~ 329 (879)
........ .+... .+......+..+.+|+.+||..||.+||++ .++++||||....
T Consensus 199 ~~~~~~~~-~i~~~-~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05592 199 EDEDELFD-SILND-RPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGID 255 (316)
T ss_pred CCHHHHHH-HHHcC-CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCC
Confidence 44433222 22221 222233456778999999999999999986 5888999998643
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-31 Score=292.54 Aligned_cols=232 Identities=16% Similarity=0.198 Sum_probs=165.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. ++.+ ....|+||||+.|++|.+++.+. ..+++.+++.++.||+.||+|||++||+||||||
T Consensus 54 ~l~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp 129 (350)
T cd05573 54 ILADADSPWIVKLYY-SFQD--EEHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKP 129 (350)
T ss_pred HHHhcCCCCccchhh-heec--CCeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence 344556888877766 4433 34689999999999999999655 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++................ +. .. ..
T Consensus 130 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~----~~------~~--------------------------~~-- 171 (350)
T cd05573 130 DNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSH----NL------LF--------------------------RD-- 171 (350)
T ss_pred HHeEECCCCCEEeecCCCCccCcccCcccccccccc----cc------cc--------------------------cc--
Confidence 999999999999999999976533211100000000 00 00 00
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....................||+.|+|||++.+..++.++|||||||+||||++
T Consensus 172 -----------------------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~ 228 (350)
T cd05573 172 -----------------------NVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFP 228 (350)
T ss_pred -----------------------cccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCC
Confidence 000000000000111234579999999999999999999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhcCCCCCCCCC-HHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~evl~hp~~~~~ 328 (879)
||.............. .....|.....++.+.+||.+||. ||.+||+ +.++++||||...
T Consensus 229 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 229 PFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred CCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 8866554333333222 222223333367889999999997 9999999 9999999999864
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=289.60 Aligned_cols=199 Identities=19% Similarity=0.196 Sum_probs=153.3
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..+. ++. .....|++|||+.|++|.+++.+. ..+++.+++.++.||+.||+|||++||+||||||+|||+
T Consensus 63 ~~~~i~~~~~-~~~--~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili 138 (332)
T cd05614 63 QSPFLVTLHY-AFQ--TEAKLHLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL 138 (332)
T ss_pred CCCCcccEEE-EEe--cCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE
Confidence 4666666554 333 334679999999999999999554 468999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++........
T Consensus 139 ~~~~~~kl~DfG~~~~~~~~~~~--------------------------------------------------------- 161 (332)
T cd05614 139 DSEGHVVLTDFGLSKEFLSEEKE--------------------------------------------------------- 161 (332)
T ss_pred CCCCCEEEeeCcCCccccccCCC---------------------------------------------------------
Confidence 99999999999998653111000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---CCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......||+.|+|||++.+.. ++.++|||||||+||||++ ||..
T Consensus 162 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 209 (332)
T cd05614 162 --------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL 209 (332)
T ss_pred --------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence 012247899999999998754 8899999999999999999 7743
Q ss_pred Chh---hHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCC
Q 002801 272 GEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (879)
Q Consensus 272 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~ 328 (879)
... .......+.. ..++.....++.+.+++.+||..||++|| ++.++++||||+..
T Consensus 210 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 210 EGERNTQSEVSRRILK-CDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred CCCCCCHHHHHHHHhc-CCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 221 1111111111 12233345667889999999999999999 78899999999864
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-31 Score=282.58 Aligned_cols=203 Identities=17% Similarity=0.156 Sum_probs=153.1
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|++++..++ ++.+ ....|+||||++++.|..+.+. ...+++..++.++.||+.||.|||+.||+|||||
T Consensus 52 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk 127 (287)
T cd07848 52 KMLRTLKQENIVELKE-AFRR--RGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIK 127 (287)
T ss_pred HHHHhCCCccccchhh-hEec--CCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 3445667888887766 4433 3468999999999877665533 3568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+||+|||+++........
T Consensus 128 p~Nill~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------------------- 156 (287)
T cd07848 128 PENLLISHNDVLKLCDFGFARNLSEGSNA--------------------------------------------------- 156 (287)
T ss_pred HHHEEEcCCCcEEEeeccCcccccccccc---------------------------------------------------
Confidence 99999999999999999998664211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~ 198 (287)
T cd07848 157 --------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQ 198 (287)
T ss_pred --------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCC
Confidence 0012468999999999998889999999999999999999
Q ss_pred -CCCCChhhHhHHhh--hccc------------------CCCc----------hhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 268 -PFSTGEEKTRTMSS--LRHR------------------VLPP----------QLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 268 -pf~~~~~~~~~~~~--~~~~------------------~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
||............ .... ..+. .....++.+.+|+.+||++||++|||+
T Consensus 199 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~ 278 (287)
T cd07848 199 PLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLT 278 (287)
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCH
Confidence 66543322211110 0000 0000 011245668899999999999999999
Q ss_pred HHHhhcccc
Q 002801 317 GELLQSEFL 325 (879)
Q Consensus 317 ~evl~hp~~ 325 (879)
+|+++||||
T Consensus 279 ~~~l~hp~f 287 (287)
T cd07848 279 EQCLNHPAF 287 (287)
T ss_pred HHHhcCCCC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=304.63 Aligned_cols=213 Identities=17% Similarity=0.207 Sum_probs=170.3
Q ss_pred CCcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhh
Q 002801 19 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 98 (879)
Q Consensus 19 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~l 98 (879)
..+.||+|+++..........+ ... ++. .+..+|+||+|++||+|..+|.+-. ++++..++.|+..|+.||+.+
T Consensus 118 ~tA~F~EERDimv~~ns~Wiv~--Lhy-AFQ--D~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldsl 191 (1317)
T KOG0612|consen 118 ETACFREERDIMVFGNSEWIVQ--LHY-AFQ--DERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSL 191 (1317)
T ss_pred hHHHHHHHhHHHHcCCcHHHHH--HHH-Hhc--CccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHH
Confidence 4467899999765554333333 223 233 3557899999999999999997765 899999999999999999999
Q ss_pred hhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 99 Hs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
|+.|+|||||||+||||+.+|++|++|||.|-.+..+ |.+
T Consensus 192 H~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d----G~V------------------------------------ 231 (1317)
T KOG0612|consen 192 HSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD----GTV------------------------------------ 231 (1317)
T ss_pred HhccceeccCCcceeEecccCcEeeccchhHHhcCCC----CcE------------------------------------
Confidence 9999999999999999999999999999999664322 110
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc----C-CCCCccC
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA----G-APVSCAS 253 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~-~~~~~~s 253 (879)
+....+|||-|.|||++. + +.|+..+
T Consensus 232 -------------------------------------------------~s~~aVGTPDYISPEvLqs~~~~~g~yG~ec 262 (1317)
T KOG0612|consen 232 -------------------------------------------------RSSVAVGTPDYISPEVLQSQGDGKGEYGREC 262 (1317)
T ss_pred -------------------------------------------------EeccccCCCCccCHHHHHhhcCCccccCCcc
Confidence 123469999999999995 2 4499999
Q ss_pred cchhHHHHHHHhhc---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccc
Q 002801 254 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFL 325 (879)
Q Consensus 254 DIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~ 325 (879)
|+||+||++|||++ ||+...-...+-.+..+. .-.|....+++.+.+||.+++. +|..|.. ++++..||||
T Consensus 263 DwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF 341 (1317)
T KOG0612|consen 263 DWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFF 341 (1317)
T ss_pred chhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccc
Confidence 99999999999998 998877666666666653 2233445688999999998876 5678877 9999999999
Q ss_pred cC
Q 002801 326 NE 327 (879)
Q Consensus 326 ~~ 327 (879)
.+
T Consensus 342 ~g 343 (1317)
T KOG0612|consen 342 EG 343 (1317)
T ss_pred cC
Confidence 64
|
|
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=288.21 Aligned_cols=198 Identities=17% Similarity=0.203 Sum_probs=155.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ ++.+ ....|++|||++|++|.+++.+. +.+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 54 ~hp~Iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili 129 (329)
T cd05588 54 NHPFLVGLHS-CFQT--ESRLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL 129 (329)
T ss_pred CCCCCCceEE-EEEc--CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE
Confidence 6888887766 4443 34689999999999999998554 579999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kL~Dfg~~~~~~~~~~---------------------------------------------------------- 151 (329)
T cd05588 130 DAEGHIKLTDYGMCKEGIRPGD---------------------------------------------------------- 151 (329)
T ss_pred CCCCCEEECcCccccccccCCC----------------------------------------------------------
Confidence 9999999999999864210000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~ 199 (329)
T cd05588 152 --------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 199 (329)
T ss_pred --------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccc
Confidence 0122478999999999999899999999999999999999 77421
Q ss_pred h--------hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC------HHHHhhcccccCC
Q 002801 273 E--------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (879)
Q Consensus 273 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~evl~hp~~~~~ 328 (879)
. ........+.... ...+...++.+.+++.+||..||.+||+ +.++++||||...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~ 268 (329)
T cd05588 200 GMSDNPDQNTEDYLFQVILEKQ-IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI 268 (329)
T ss_pred cccccccccchHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 1 1111122222221 1222345678899999999999999987 7899999999764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=287.69 Aligned_cols=200 Identities=19% Similarity=0.164 Sum_probs=158.9
Q ss_pred cccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
...+|++++..+. .+. .....|++|||+.|++|..++.+. ..+++..++.++.||+.||+|||++||+||||||+|
T Consensus 51 ~~l~hp~iv~~~~-~~~--~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~N 126 (323)
T cd05575 51 KNVKHPFLVGLHY-SFQ--TADKLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPEN 126 (323)
T ss_pred hhCCCCCCCCeeE-EEE--eCCEEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHH
Confidence 4567888888766 333 244689999999999999999654 578999999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
||++.++.+||+|||+++.......
T Consensus 127 Ill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------------- 151 (323)
T cd05575 127 ILLDSQGHVVLTDFGLCKEGIEHSK------------------------------------------------------- 151 (323)
T ss_pred eEECCCCcEEEeccCCCcccccCCC-------------------------------------------------------
Confidence 9999999999999999864211000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CC
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf 269 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ ||
T Consensus 152 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf 196 (323)
T cd05575 152 -----------------------------------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPF 196 (323)
T ss_pred -----------------------------------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCC
Confidence 0122478999999999999899999999999999999999 77
Q ss_pred CCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccccCC
Q 002801 270 STGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (879)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~~~~ 328 (879)
............+... . ......++.+.++|.+||+.||.+||++ .++++||||...
T Consensus 197 ~~~~~~~~~~~i~~~~-~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 197 YSRDTAEMYDNILNKP-L-RLKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCHHHHHHHHHcCC-C-CCCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 6544333222222221 1 1223456789999999999999999987 699999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=286.54 Aligned_cols=202 Identities=18% Similarity=0.217 Sum_probs=160.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+.|++|.+++.+. +.+++..+..++.||+.||+|||++||+||||||
T Consensus 53 il~~l~hp~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp 128 (323)
T cd05584 53 ILEAVKHPFIVDLIY-AFQT--GGKLYLILEYLSGGELFMHLERE-GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKP 128 (323)
T ss_pred HHHhCCCCchhceee-EEec--CCeEEEEEeCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 345567888888776 3433 34689999999999999999654 5688999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 129 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------------- 155 (323)
T cd05584 129 ENILLDAQGHVKLTDFGLCKESIHEGT----------------------------------------------------- 155 (323)
T ss_pred HHeEECCCCCEEEeeCcCCeecccCCC-----------------------------------------------------
Confidence 999999999999999999864211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 156 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~ 198 (323)
T cd05584 156 -------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAP 198 (323)
T ss_pred -------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCC
Confidence 0012478999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~ 328 (879)
||............+. ... +.+...++.+.+||.+||..+|++|| ++.++++||||...
T Consensus 199 pf~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 199 PFTAENRKKTIDKILK-GKL-NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred CCCCCCHHHHHHHHHc-CCC-CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 7765443333222222 221 22234567899999999999999999 89999999999864
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=287.41 Aligned_cols=201 Identities=15% Similarity=0.151 Sum_probs=159.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+. .....|+||||+.|++|..++.. ..+++.+++.++.||+.||+|||++||+||||||+
T Consensus 56 ~~~l~hp~i~~~~~-~~~--~~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~ 130 (324)
T cd05589 56 ANSERHPFLVNLFA-CFQ--TEDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLD 130 (324)
T ss_pred ccccCCCChhceee-EEE--cCCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHH
Confidence 34567888888776 433 34468999999999999998854 46899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.......
T Consensus 131 Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------------ 156 (324)
T cd05589 131 NLLLDTEGFVKIADFGLCKEGMGFGD------------------------------------------------------ 156 (324)
T ss_pred HeEECCCCcEEeCcccCCccCCCCCC------------------------------------------------------
Confidence 99999999999999999864211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||.+.+..++.++|||||||+||||++ |
T Consensus 157 ------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~p 200 (324)
T cd05589 157 ------------------------------------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESP 200 (324)
T ss_pred ------------------------------------cccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCC
Confidence 0122478999999999999889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
|.................. .+...++.+.++|.+||..||.+|| ++.++++||||....
T Consensus 201 f~~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~ 264 (324)
T cd05589 201 FPGDDEEEVFDSIVNDEVR--YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264 (324)
T ss_pred CCCCCHHHHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCC
Confidence 7654433332222222222 2234567889999999999999999 699999999998643
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=268.90 Aligned_cols=308 Identities=20% Similarity=0.305 Sum_probs=259.7
Q ss_pred ecccccCceEEEeecC-cEE--E-EEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceE
Q 002801 537 INPFLEGLCKYLSFSK-LRV--K-ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~-~~~--~-~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~ 612 (879)
+..+.++++.++.+.. .+. . .....-++.||.+.|.+++|+.|...+++|+. +.|+||+..+.. .+.
T Consensus 338 lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~k--------ciR 408 (888)
T KOG0306|consen 338 LVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLK--------CIR 408 (888)
T ss_pred EEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcc--------eeE
Confidence 3337788888886654 111 1 12223456799999999999999888887665 699999988632 334
Q ss_pred EeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 002801 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 613 ~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~ 692 (879)
.+.+. -+.|.+|.|. ..++++|...|.+.+||+.....+.+++.|++.||+++.+| |+..+++||.|.+|++||..-
T Consensus 409 Ti~~~-y~l~~~Fvpg-d~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~p-D~~g~vT~saDktVkfWdf~l 485 (888)
T KOG0306|consen 409 TITCG-YILASKFVPG-DRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSP-DNKGFVTGSADKTVKFWDFKL 485 (888)
T ss_pred Eeccc-cEEEEEecCC-CceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecC-CCCceEEecCCcEEEEEeEEE
Confidence 44444 7888899984 89999999999999999999999999999999999999999 999999999999999999742
Q ss_pred -----C--ceE------EEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCC
Q 002801 693 -----G--VSI------GTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DAT 758 (879)
Q Consensus 693 -----~--~~i------~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~ 758 (879)
+ +.+ +++.-...|.|+.++|+ +++||++--|.+|++|-+.+.+. ..++.||.-+|.++..+ |+.
T Consensus 486 ~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spd-gk~LaVsLLdnTVkVyflDtlKF-flsLYGHkLPV~smDIS~DSk 563 (888)
T KOG0306|consen 486 VVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPD-GKLLAVSLLDNTVKVYFLDTLKF-FLSLYGHKLPVLSMDISPDSK 563 (888)
T ss_pred EeccCcccceeeeeccceEEeccccEEEEEEcCC-CcEEEEEeccCeEEEEEecceee-eeeecccccceeEEeccCCcC
Confidence 1 111 34445678999999999 99999999999999999999885 67788999999999999 999
Q ss_pred EEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCC
Q 002801 759 TLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADP 838 (879)
Q Consensus 759 ~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~ 838 (879)
+++|||.|..|++|-+.-+ .|-+++-+|...|.+|.|-|...++.+||-|+.|+-||-..-+.+..+
T Consensus 564 livTgSADKnVKiWGLdFG------DCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L------- 630 (888)
T KOG0306|consen 564 LIVTGSADKNVKIWGLDFG------DCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKL------- 630 (888)
T ss_pred eEEeccCCCceEEeccccc------hhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhheee-------
Confidence 9999999999999999887 788999999999999999999999999999999999987643333332
Q ss_pred CCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 839 LSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 839 ~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
++|..-|++++..|+|. ++++++.|.+|++|+.
T Consensus 631 ------~~H~~ev~cLav~~~G~-~vvs~shD~sIRlwE~ 663 (888)
T KOG0306|consen 631 ------DGHHSEVWCLAVSPNGS-FVVSSSHDKSIRLWER 663 (888)
T ss_pred ------ccchheeeeeEEcCCCC-eEEeccCCceeEeeec
Confidence 57888899999999999 9999999999999974
|
|
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=292.04 Aligned_cols=204 Identities=15% Similarity=0.176 Sum_probs=159.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+. .....|+||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||
T Consensus 96 il~~~~h~~iv~~~~-~~~--~~~~~~lv~Ey~~gg~L~~~l~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp 170 (370)
T cd05596 96 IMAHANSEWIVQLHY-AFQ--DDKYLYMVMEYMPGGDLVNLMSN--YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKP 170 (370)
T ss_pred HHHhCCCCCcceEEE-EEe--cCCEEEEEEcCCCCCcHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence 455678888888766 333 34468999999999999999954 3589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||++.........
T Consensus 171 ~NILl~~~~~~kL~DfG~~~~~~~~~~~---------------------------------------------------- 198 (370)
T cd05596 171 DNMLLDKSGHLKLADFGTCMKMDANGMV---------------------------------------------------- 198 (370)
T ss_pred HHEEEcCCCCEEEEeccceeeccCCCcc----------------------------------------------------
Confidence 9999999999999999998653211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC----CCCccCcchhHHHHHHHhh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~sDIwSlGvil~ell 266 (879)
.....+||+.|+|||++.+. .++.++|||||||+||||+
T Consensus 199 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyell 241 (370)
T cd05596 199 -------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 241 (370)
T ss_pred -------------------------------------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHH
Confidence 00224789999999998753 3789999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
+ ||............+... ...+.....+..+.+||.+||..+|.+ ||++.++++||||...
T Consensus 242 tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 242 VGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred hCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 9 776554433333332221 122333356788999999999999988 9999999999999863
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=281.80 Aligned_cols=201 Identities=19% Similarity=0.255 Sum_probs=151.1
Q ss_pred ecccccccCCCCCCccccc---ccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 32 LTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~---~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+.+.+|+|++..++ ++.+ +.....+++|||+.+ +|.+++... ...+++.+++.++.||+.||+|||++||+|||
T Consensus 56 l~~~~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 133 (288)
T cd07863 56 LEAFDHPNIVRLMD-VCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRD 133 (288)
T ss_pred hhhcCCCCeeeeee-eeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 34457888887776 4432 223457999999975 899988543 34589999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+||+|||+++......
T Consensus 134 ikp~Nili~~~~~~kl~dfg~~~~~~~~~--------------------------------------------------- 162 (288)
T cd07863 134 LKPENILVTSGGQVKLADFGLARIYSCQM--------------------------------------------------- 162 (288)
T ss_pred CCHHHEEECCCCCEEECccCccccccCcc---------------------------------------------------
Confidence 99999999999999999999986532110
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......||..|+|||++.+..++.++|||||||++|||++
T Consensus 163 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~ 202 (288)
T cd07863 163 ----------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 202 (288)
T ss_pred ----------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHh
Confidence 0012367899999999998889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcc------------------cCCC--------chhhccChhhHHHHHHhcCCCCCCCCCHHHH
Q 002801 268 --PFSTGEEKTRTMSSLRH------------------RVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~------------------~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ev 319 (879)
|++........+..+.. .... .........+.+|+.+||++||.+|||+.|+
T Consensus 203 g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~ 282 (288)
T cd07863 203 RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRA 282 (288)
T ss_pred CCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHH
Confidence 43333222221111100 0000 0112345567899999999999999999999
Q ss_pred hhcccc
Q 002801 320 LQSEFL 325 (879)
Q Consensus 320 l~hp~~ 325 (879)
+.||||
T Consensus 283 l~hp~f 288 (288)
T cd07863 283 LQHPFF 288 (288)
T ss_pred hcCCCC
Confidence 999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=289.06 Aligned_cols=202 Identities=17% Similarity=0.214 Sum_probs=156.7
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+.+..|++++..+.+.+. .....|+||||++|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+
T Consensus 54 l~~~~~~~~i~~~~~~~~--~~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~ 130 (324)
T cd05587 54 LALPGKPPFLTQLHSCFQ--TMDRLYFVMEYVNGGDLMYHIQQV-GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLD 130 (324)
T ss_pred HHhcCCCCceeeeEEEEE--cCCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 344556555443432333 234689999999999999999654 46899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.......
T Consensus 131 Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------------------------------ 156 (324)
T cd05587 131 NVMLDAEGHIKIADFGMCKENIFGGK------------------------------------------------------ 156 (324)
T ss_pred HeEEcCCCCEEEeecCcceecCCCCC------------------------------------------------------
Confidence 99999999999999999854210000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ |
T Consensus 157 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~p 200 (324)
T cd05587 157 ------------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPP 200 (324)
T ss_pred ------------------------------------ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCC
Confidence 0122478999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~~~~ 328 (879)
|................ +..+...++.+.+++.+||.+||.+|+++ .++++||||...
T Consensus 201 f~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 201 FDGEDEDELFQSIMEHN--VSYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred CCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 76554433333332222 22223456788999999999999999986 899999999864
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=285.06 Aligned_cols=199 Identities=19% Similarity=0.235 Sum_probs=157.9
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ ++.+ ....|++|||++|++|.+++.+. ..+++.++..++.||+.||.|||++||+||||||+|||
T Consensus 53 ~~hp~iv~~~~-~~~~--~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil 128 (316)
T cd05619 53 WEHPFLTHLYC-TFQT--KENLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNIL 128 (316)
T ss_pred cCCCcCcceEE-EEEe--CCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEE
Confidence 47888877776 4433 34689999999999999999654 56899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++.......
T Consensus 129 ~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------------------- 151 (316)
T cd05619 129 LDTDGHIKIADFGMCKENMLGDA--------------------------------------------------------- 151 (316)
T ss_pred ECCCCCEEEccCCcceECCCCCC---------------------------------------------------------
Confidence 99999999999999854210000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~ 198 (316)
T cd05619 152 ---------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHG 198 (316)
T ss_pred ---------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCC
Confidence 0122478999999999999889999999999999999999 7765
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHH-HHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-evl~hp~~~~~~ 329 (879)
.... .....+.... +......+..+.+|+.+||+.||.+||++. ++++||||....
T Consensus 199 ~~~~-~~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 199 HDEE-ELFQSIRMDN-PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CCHH-HHHHHHHhCC-CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 4433 2233332221 112223567789999999999999999996 899999998754
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=250.72 Aligned_cols=282 Identities=20% Similarity=0.303 Sum_probs=234.1
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCC--CCeEEEeeCCC
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFEG 640 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~--~~~l~s~~~dg 640 (879)
+.+-|.+.|.+|... +++|+||++||.++||+.... ......+|.++|.+++|...+ ...+++++.|.
T Consensus 100 ~~~~hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk--------~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dq 169 (423)
T KOG0313|consen 100 QCFLHDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGK--------SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQ 169 (423)
T ss_pred ccccchhhhhhhccc--CceEEEeecCCeeEEEecCCc--------eEEEEecCCcceeeeEEEecCCccceEEEecCCc
Confidence 345789999999988 789999999999999998752 233456799999999995432 23699999999
Q ss_pred cEEEEEcCCCeE----EEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCC-------------------------
Q 002801 641 VVQVWDVSRSQV----LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN------------------------- 691 (879)
Q Consensus 641 ~V~vwd~~~~~~----~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~------------------------- 691 (879)
++++|..+.+.. +..-.+|...|-+|+..+ ++..+++||.|..|+||+..
T Consensus 170 tl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~-sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~ 248 (423)
T KOG0313|consen 170 TLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDS-SGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGG 248 (423)
T ss_pred eEEEEEecCchhhhhHHhHhcccccceeEEEecC-CCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhccc
Confidence 999999877653 233358999999999999 99999999999999999932
Q ss_pred CCceEEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcE
Q 002801 692 QGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTL 769 (879)
Q Consensus 692 ~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i 769 (879)
++.++.++. |..+|.+|.|++. ..+.+++.|++|+.||+.+++. ...+. -.++++++.++ ...+|++||.|..|
T Consensus 249 ~r~P~vtl~GHt~~Vs~V~w~d~--~v~yS~SwDHTIk~WDletg~~-~~~~~-~~ksl~~i~~~~~~~Ll~~gssdr~i 324 (423)
T KOG0313|consen 249 TRTPLVTLEGHTEPVSSVVWSDA--TVIYSVSWDHTIKVWDLETGGL-KSTLT-TNKSLNCISYSPLSKLLASGSSDRHI 324 (423)
T ss_pred ccCceEEecccccceeeEEEcCC--CceEeecccceEEEEEeecccc-eeeee-cCcceeEeecccccceeeecCCCCce
Confidence 124455555 4567999999984 6899999999999999999984 44443 35688999998 88999999999999
Q ss_pred EEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecCCCC-CceecccCCCCCCCCCCCCCC
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPM-PALSFNFNHADPLSGPETDDA 847 (879)
Q Consensus 770 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~~~~-~~~~~~~~~~~~~~~~~~~~h 847 (879)
++||-+++.. .....+|.||.+.|..|.|+|.+. .|++||.||++++||+++.+ |+..+ .+|
T Consensus 325 rl~DPR~~~g---s~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI-------------~~h 388 (423)
T KOG0313|consen 325 RLWDPRTGDG---SVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI-------------AGH 388 (423)
T ss_pred eecCCCCCCC---ceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee-------------ccC
Confidence 9999999854 356789999999999999999876 68999999999999999876 66544 467
Q ss_pred CCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 848 AQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 848 ~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
...|.++.|+..+ .+++||.|.+|+|+.
T Consensus 389 ~DKvl~vdW~~~~--~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 389 NDKVLSVDWNEGG--LIVSGGADNKLRIFK 416 (423)
T ss_pred CceEEEEeccCCc--eEEeccCcceEEEec
Confidence 8889999998544 699999999999985
|
|
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=285.63 Aligned_cols=209 Identities=16% Similarity=0.147 Sum_probs=149.8
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--------CCCCChhHHHHHHHHHHHHHHhhh
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--------~~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
+...+.+.+|+|++..+. ++.+......|++|||+. ++|.+++... ...+++..++.|++||+.||+|||
T Consensus 48 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 125 (317)
T cd07868 48 EIALLRELKHPNVISLQK-VFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 125 (317)
T ss_pred HHHHHHhcCCCCCcceee-eEecCCCcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH
Confidence 333456678888888776 554445556899999985 5888877321 235899999999999999999999
Q ss_pred hcCcccccCCCcceee----ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcccccccccc
Q 002801 100 SQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 100 s~givHrDlKP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
++||+||||||+|||+ +..+.+||+|||+++........ .
T Consensus 126 ~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--~---------------------------------- 169 (317)
T cd07868 126 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--L---------------------------------- 169 (317)
T ss_pred hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--c----------------------------------
Confidence 9999999999999999 45678999999999764221000 0
Q ss_pred CCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCc
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 254 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sD 254 (879)
......+||++|+|||++.+. .++.++|
T Consensus 170 ---------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~D 198 (317)
T cd07868 170 ---------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAID 198 (317)
T ss_pred ---------------------------------------------------cccCCccccccccCCHHHcCCCCcCchhh
Confidence 001224789999999999875 4899999
Q ss_pred chhHHHHHHHhhc---CCCCChhhH--------hHHhhh---cc-------------------------cCCC-------
Q 002801 255 IYRLGVLLFELFC---PFSTGEEKT--------RTMSSL---RH-------------------------RVLP------- 288 (879)
Q Consensus 255 IwSlGvil~ell~---pf~~~~~~~--------~~~~~~---~~-------------------------~~~~------- 288 (879)
||||||++|||++ ||....... ..+..+ .. ....
T Consensus 199 iwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (317)
T cd07868 199 IWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKY 278 (317)
T ss_pred HHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccch
Confidence 9999999999999 664322110 000000 00 0000
Q ss_pred --chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 289 --PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 289 --~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
.......+.+.+||.+||+.||.+|||++|+|+||||
T Consensus 279 ~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 279 MEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0001123457799999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=286.93 Aligned_cols=199 Identities=18% Similarity=0.213 Sum_probs=155.1
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..++ ++.+ ....|+||||+.|++|..++.+. +.+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 53 ~~hp~iv~~~~-~~~~--~~~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nil 128 (329)
T cd05618 53 SNHPFLVGLHS-CFQT--ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVL 128 (329)
T ss_pred CCCCcCCceee-EEEe--CCEEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEE
Confidence 37888888776 4433 34689999999999999988554 56899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.+||+|||+++.......
T Consensus 129 i~~~~~~kL~DfG~~~~~~~~~~--------------------------------------------------------- 151 (329)
T cd05618 129 LDSEGHIKLTDYGMCKEGLRPGD--------------------------------------------------------- 151 (329)
T ss_pred ECCCCCEEEeeCCccccccCCCC---------------------------------------------------------
Confidence 99999999999999864211000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 152 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~ 198 (329)
T cd05618 152 ---------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 198 (329)
T ss_pred ---------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCcc
Confidence 0122478999999999999999999999999999999999 7742
Q ss_pred Ch--------hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC------HHHHhhcccccCC
Q 002801 272 GE--------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 328 (879)
Q Consensus 272 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~evl~hp~~~~~ 328 (879)
.. ........+... ....+...++.+.+|+.+||..||.+||+ +.++++||||...
T Consensus 199 ~~~~~~~~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 199 VGSSDNPDQNTEDYLFQVILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCcCCcccccHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 10 011111111111 11222345678899999999999999998 5899999999864
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=239.60 Aligned_cols=293 Identities=17% Similarity=0.227 Sum_probs=238.2
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~ 643 (879)
+.||.-+++.|.|+.+|.+|.+|++|.++.||-...+ ++ .-...+|.+.|+|+..+.. ...+++|+.|.+++
T Consensus 6 l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nG---er----lGty~GHtGavW~~Did~~-s~~liTGSAD~t~k 77 (327)
T KOG0643|consen 6 LQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNG---ER----LGTYDGHTGAVWCCDIDWD-SKHLITGSADQTAK 77 (327)
T ss_pred cccCccccceEEecCCCcEEEEecCCCCceEEEecCC---ce----eeeecCCCceEEEEEecCC-cceeeeccccceeE
Confidence 5689999999999999999999999999999965332 11 1233679999999998864 88999999999999
Q ss_pred EEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCC-----CcEEEEeCC-------CCceEEEEec-CCceEEEEe
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD-----GSVKLWSIN-------QGVSIGTIKT-KANVCCVQF 710 (879)
Q Consensus 644 vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~D-----g~V~iwd~~-------~~~~i~~~~~-~~~v~~v~~ 710 (879)
+||+++|+++..++ ...+|..+.|++ ++++++.+.++ +.|.++|++ ...++..+.. .+.++.+-|
T Consensus 78 LWDv~tGk~la~~k-~~~~Vk~~~F~~-~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~W 155 (327)
T KOG0643|consen 78 LWDVETGKQLATWK-TNSPVKRVDFSF-GGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALW 155 (327)
T ss_pred EEEcCCCcEEEEee-cCCeeEEEeecc-CCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeee
Confidence 99999999999885 567999999999 88888877654 679999998 4456666664 566999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEE
Q 002801 711 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 789 (879)
Q Consensus 711 ~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 789 (879)
.|- +.+|++|..||.|.+||++++...+..-..|...|+.+.|+ +..+++|+|.|.+-++||+.+. .+++++
T Consensus 156 g~l-~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl------~v~Kty 228 (327)
T KOG0643|consen 156 GPL-GETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL------EVLKTY 228 (327)
T ss_pred ccc-CCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccce------eeEEEe
Confidence 999 89999999999999999999987677788899999999999 9999999999999999999987 778888
Q ss_pred eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCC---CCCCCCCCEEEEEEeCCCCcEEEE
Q 002801 790 TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGP---ETDDAAQFISSVCWRGQSSNTLVA 866 (879)
Q Consensus 790 ~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~---~~~~h~~~V~~v~~~p~~~~~l~s 866 (879)
.. ..+||+.+++|...++++||.-..--|=-.....-...-+|-+. +... ...+|-++|++|+|+|+|. ..++
T Consensus 229 ~t-e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~--i~eEEigrvkGHFGPINsvAfhPdGk-sYsS 304 (327)
T KOG0643|consen 229 TT-ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHL--IFEEEIGRVKGHFGPINSVAFHPDGK-SYSS 304 (327)
T ss_pred ee-cccccceecccccceEEecCCceeeeeeeecccccchhhhHHHH--HHHHHhccccccccCcceeEECCCCc-cccc
Confidence 74 67899999999999888888654433322211111011111110 0001 1268999999999999999 9999
Q ss_pred EeCCCcEEEEE
Q 002801 867 ANSSGNIKILE 877 (879)
Q Consensus 867 ~~~Dg~I~vw~ 877 (879)
||.||.|++.-
T Consensus 305 GGEDG~VR~h~ 315 (327)
T KOG0643|consen 305 GGEDGYVRLHH 315 (327)
T ss_pred CCCCceEEEEE
Confidence 99999999974
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=272.73 Aligned_cols=284 Identities=17% Similarity=0.270 Sum_probs=244.4
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vw 645 (879)
.-++.|..++|+|....++++-.+|.|++||+.-+..... ...|.++|..|+|+|. ..+++||+.|-.|+||
T Consensus 7 skSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~r-------FdeHdGpVRgv~FH~~-qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 7 SKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDR-------FDEHDGPVRGVDFHPT-QPLFVSGGDDYKIKVW 78 (1202)
T ss_pred cccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhh-------hhccCCccceeeecCC-CCeEEecCCccEEEEE
Confidence 3467899999999999999999999999999875322111 1348999999999995 9999999999999999
Q ss_pred EcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc-eEEEEeeCCCCCEEEEEeCC
Q 002801 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN-VCCVQFPLDSGRSLAFGSAD 724 (879)
Q Consensus 646 d~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~-v~~v~~~p~~~~~l~tgs~d 724 (879)
+..+.+++.++.+|-.-|..+.|++ .--.++|+|+|.+|+||+..+++++..+..|.- |.|.+|+|. ..+++++|-|
T Consensus 79 nYk~rrclftL~GHlDYVRt~~FHh-eyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhpt-EDlIVSaSLD 156 (1202)
T KOG0292|consen 79 NYKTRRCLFTLLGHLDYVRTVFFHH-EYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPT-EDLIVSASLD 156 (1202)
T ss_pred ecccceehhhhccccceeEEeeccC-CCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCc-cceEEEeccc
Confidence 9999999999999999999999999 667999999999999999999999999987655 999999998 7899999999
Q ss_pred CeEEEEEcCCCc----------------------------eeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecC
Q 002801 725 HRIYYYDLRNSK----------------------------IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLS 775 (879)
Q Consensus 725 ~~I~iwDl~~~~----------------------------~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~ 775 (879)
.+|++||+...+ .....+.||...|+.++|+ .-.+|+||+.|..|++|.++
T Consensus 157 QTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmn 236 (1202)
T KOG0292|consen 157 QTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 236 (1202)
T ss_pred ceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEec
Confidence 999999986421 0124567999999999999 77899999999999999998
Q ss_pred CCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEE
Q 002801 776 MCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVC 855 (879)
Q Consensus 776 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 855 (879)
..+. -.+.+..||.+.|.++-|+|....|++.|+|++|+|||+...+.+.+++-. .+.-+.++
T Consensus 237 etKa----WEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrre-------------ndRFW~la 299 (1202)
T KOG0292|consen 237 ETKA----WEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRE-------------NDRFWILA 299 (1202)
T ss_pred cccc----eeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeecc-------------CCeEEEEE
Confidence 7643 457788999999999999999999999999999999999988888877522 34578999
Q ss_pred EeCCCCcEEEEEeCCCcEEEEEe
Q 002801 856 WRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 856 ~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
-+|..+ |.+|+.|+-+-||.+
T Consensus 300 ahP~lN--LfAAgHDsGm~VFkl 320 (1202)
T KOG0292|consen 300 AHPELN--LFAAGHDSGMIVFKL 320 (1202)
T ss_pred ecCCcc--eeeeecCCceEEEEE
Confidence 999999 555666666667654
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-31 Score=291.32 Aligned_cols=204 Identities=15% Similarity=0.172 Sum_probs=158.9
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+.+ ....|+||||++|++|.+++++....+++..++.++.||+.||.|||++||+||||||+
T Consensus 55 ~~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~ 131 (330)
T cd05601 55 LSISNSPWIPQLQY-AFQD--KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPE 131 (330)
T ss_pred HHhCCCCCCcceee-EEec--CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchH
Confidence 34456777777665 4433 34689999999999999999766567999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++........
T Consensus 132 NIll~~~~~~kL~Dfg~a~~~~~~~~~----------------------------------------------------- 158 (330)
T cd05601 132 NVLIDRTGHIKLADFGSAARLTANKMV----------------------------------------------------- 158 (330)
T ss_pred heEECCCCCEEeccCCCCeECCCCCce-----------------------------------------------------
Confidence 999999999999999998654211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc------CCCCCccCcchhHHHHHHHh
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~sDIwSlGvil~el 265 (879)
......||+.|+|||++. +..++.++|||||||+||||
T Consensus 159 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el 202 (330)
T cd05601 159 ------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEM 202 (330)
T ss_pred ------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeee
Confidence 001237899999999987 45588999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
++ ||............+... ...+.....++.+.+|+.+||. +|.+||++.++++||||...
T Consensus 203 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 203 IYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 99 886554433333222221 1122333456788999999998 99999999999999999864
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9e-31 Score=293.97 Aligned_cols=209 Identities=16% Similarity=0.144 Sum_probs=156.0
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+...+|+|++..++ ++.. ....+++||++ +++|..++... +.+++.+++.|++||+.||+|||++|||||||
T Consensus 134 ~~il~~l~HpnIv~~~~-~~~~--~~~~~lv~e~~-~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDi 208 (391)
T PHA03212 134 AHILRAINHPSIIQLKG-TFTY--NKFTCLILPRY-KTDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHRDI 208 (391)
T ss_pred HHHHHhCCCCCCCCEeE-EEEE--CCeeEEEEecC-CCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence 33456678899988776 4432 34679999999 47899888554 46899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+|||++..+.+||+|||+++........
T Consensus 209 KP~NIll~~~~~vkL~DFG~a~~~~~~~~~-------------------------------------------------- 238 (391)
T PHA03212 209 KAENIFINHPGDVCLGDFGAACFPVDINAN-------------------------------------------------- 238 (391)
T ss_pred ChHhEEEcCCCCEEEEeCCccccccccccc--------------------------------------------------
Confidence 999999999999999999998642110000
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 239 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg 279 (391)
T PHA03212 239 ---------------------------------------KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATC 279 (391)
T ss_pred ---------------------------------------ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence 0122478999999999999899999999999999999998
Q ss_pred --CCCCChh------hHhHHhhhc--------------------------c-cC-----CC--chhhccChhhHHHHHHh
Q 002801 268 --PFSTGEE------KTRTMSSLR--------------------------H-RV-----LP--PQLLLKFPKEASFCLWL 305 (879)
Q Consensus 268 --pf~~~~~------~~~~~~~~~--------------------------~-~~-----~~--~~~~~~~~~~~~li~~~ 305 (879)
||+.... ....+..+. . .. .+ ......+..+.+||.+|
T Consensus 280 ~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~m 359 (391)
T PHA03212 280 HDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKM 359 (391)
T ss_pred CCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHH
Confidence 5543211 000000000 0 00 00 01112345688999999
Q ss_pred cCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 306 LHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 306 L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
|..||.+|||+.|+|+||||.....+
T Consensus 360 L~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 360 LAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred hcCChhhCCCHHHHhcChhhccCCCC
Confidence 99999999999999999999876543
|
|
| >KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-27 Score=238.94 Aligned_cols=278 Identities=18% Similarity=0.264 Sum_probs=232.6
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeC--CCcEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF--EGVVQV 644 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~--dg~V~v 644 (879)
..+.|+++.|+++|.++++++.|..|+|||..++..... ...++..+..++|... .+.++.++. |.+|+.
T Consensus 13 ~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~t-------i~skkyG~~~~~Fth~-~~~~i~sStk~d~tIry 84 (311)
T KOG1446|consen 13 TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKT-------INSKKYGVDLACFTHH-SNTVIHSSTKEDDTIRY 84 (311)
T ss_pred CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeE-------eecccccccEEEEecC-CceEEEccCCCCCceEE
Confidence 467899999999999999999999999999887433211 1224567889999775 444554444 889999
Q ss_pred EEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCC
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSAD 724 (879)
Q Consensus 645 wd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d 724 (879)
.++.+.+.++.|.+|.+.|++++.+| -+..|+|+|.|++|++||++..++...+...+. ..++|+|. |-++|++...
T Consensus 85 Lsl~dNkylRYF~GH~~~V~sL~~sP-~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~-pi~AfDp~-GLifA~~~~~ 161 (311)
T KOG1446|consen 85 LSLHDNKYLRYFPGHKKRVNSLSVSP-KDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR-PIAAFDPE-GLIFALANGS 161 (311)
T ss_pred EEeecCceEEEcCCCCceEEEEEecC-CCCeEEecccCCeEEeeEecCCCCceEEecCCC-cceeECCC-CcEEEEecCC
Confidence 99999999999999999999999999 669999999999999999999888877776554 35789999 8899999888
Q ss_pred CeEEEEEcCCC-ceeeEEEcc---CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcE---
Q 002801 725 HRIYYYDLRNS-KIPLCTLIG---HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK--- 796 (879)
Q Consensus 725 ~~I~iwDl~~~-~~~~~~~~~---h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v--- 796 (879)
..|++||+|.. +-|..++.- .....+.|.|+ +|++|+.++..+.+++.|.-.+ ..+.++.++.+.-
T Consensus 162 ~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G------~~~~tfs~~~~~~~~~ 235 (311)
T KOG1446|consen 162 ELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDG------TVKSTFSGYPNAGNLP 235 (311)
T ss_pred CeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCC------cEeeeEeeccCCCCcc
Confidence 89999999986 456666653 36788999999 9999999999999999999988 5678888776644
Q ss_pred EEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 797 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 797 ~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
....|+|++++|.+|+.||+|.+|++++++.+..+.- .+.++++++.|+|... ++||+++ .+-+|
T Consensus 236 ~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~------------~~~~~~~~~~fnP~~~-mf~sa~s--~l~fw 300 (311)
T KOG1446|consen 236 LSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRG------------PNGGPVSCVRFNPRYA-MFVSASS--NLVFW 300 (311)
T ss_pred eeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecC------------CCCCCccccccCCcee-eeeecCc--eEEEE
Confidence 4678999999999999999999999999998887751 2567799999999998 8888876 56666
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-27 Score=254.73 Aligned_cols=265 Identities=28% Similarity=0.413 Sum_probs=229.1
Q ss_pred ceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
.++++..+|.+.+|+..+.+....+ ..|...+..+.|+|++++|++++.||.|++|++..... .....
T Consensus 23 ~l~~~~~~g~i~i~~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~-------~~~~~ 90 (289)
T cd00200 23 LLATGSGDGTIKVWDLETGELLRTL-----KGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGEC-------VRTLT 90 (289)
T ss_pred EEEEeecCcEEEEEEeeCCCcEEEE-----ecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccc-------eEEEe
Confidence 3477777999999999887654443 36788899999999999999999999999999985311 11222
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~ 694 (879)
.+...|.++.|++. +.++++++.||.|.+||+.+++....+..|...|.++.|+| ++.++++++.|+.|++||+++++
T Consensus 91 ~~~~~i~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~~~~i~i~d~~~~~ 168 (289)
T cd00200 91 GHTSYVSSVAFSPD-GRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP-DGTFVASSSQDGTIKLWDLRTGK 168 (289)
T ss_pred ccCCcEEEEEEcCC-CCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC-cCCEEEEEcCCCcEEEEEccccc
Confidence 46678999999985 77888888899999999999998888888999999999999 78888888889999999999988
Q ss_pred eEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEE
Q 002801 695 SIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLW 772 (879)
Q Consensus 695 ~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lw 772 (879)
.+..+..+ ..+.++.|+|+ ++.+++++.|+.|++||++..+ ++..+..|...+.++.|+ ++.++++++.|+.|++|
T Consensus 169 ~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~~~~i~i~d~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~i~ 246 (289)
T cd00200 169 CVATLTGHTGEVNSVAFSPD-GEKLLSSSSDGTIKLWDLSTGK-CLGTLRGHENGVNSVAFSPDGYLLASGSEDGTIRVW 246 (289)
T ss_pred cceeEecCccccceEEECCC-cCEEEEecCCCcEEEEECCCCc-eecchhhcCCceEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 88888754 47999999999 7788888889999999999876 477777899999999999 77888888889999999
Q ss_pred ecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
|+... .++..+.+|...+.+++|+|++.+|++++.|+.|++|+
T Consensus 247 ~~~~~------~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 247 DLRTG------ECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EcCCc------eeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99875 66777888999999999999999999999999999996
|
|
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=280.37 Aligned_cols=199 Identities=17% Similarity=0.078 Sum_probs=158.4
Q ss_pred CceeecccccccCCCCCCccccc--ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 104 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~giv 104 (879)
+...+...+|+|++..++ ++.+ +.....+++|||+.||+|.+++.+. ..+++.....++.|++.||.|||+ .+++
T Consensus 68 E~~~l~~l~h~nIv~~~g-~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ 145 (283)
T PHA02988 68 EIKNLRRIDSNNILKIYG-FIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNKP 145 (283)
T ss_pred HHHHHHhcCCCCEEEEee-eEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCCC
Confidence 334555667888887776 5544 3345679999999999999999664 578999999999999999999998 4999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+|||++.++.+|++|||+++.....
T Consensus 146 Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~------------------------------------------------- 176 (283)
T PHA02988 146 YKNLTSVSFLVTENYKLKIICHGLEKILSSP------------------------------------------------- 176 (283)
T ss_pred CCcCChhhEEECCCCcEEEcccchHhhhccc-------------------------------------------------
Confidence 9999999999999999999999998653111
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCcchhHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLL 262 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvil 262 (879)
....+||..|+|||++.+ ..++.++|||||||++
T Consensus 177 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil 212 (283)
T PHA02988 177 --------------------------------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVL 212 (283)
T ss_pred --------------------------------------------cccccCcccccCHHHhhhccccccchhhhhHHHHHH
Confidence 011367889999999976 5799999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|||++ ||............+.....++.+...++.+.+|+.+||+.||.+|||+.++++
T Consensus 213 ~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 213 WEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 99999 887655444333333333333433456788999999999999999999999985
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-30 Score=291.99 Aligned_cols=203 Identities=16% Similarity=0.192 Sum_probs=157.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|+||||++||+|.++++.. .+++.+++.++.||+.||+|||++||+||||||+
T Consensus 97 ~~~~~hp~iv~~~~-~~~~--~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~ 171 (370)
T cd05621 97 MAFANSPWVVQLFC-AFQD--DKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPD 171 (370)
T ss_pred HHhCCCCCEeeEEE-EEEc--CCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 44567888888776 4433 44689999999999999999543 5899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++........
T Consensus 172 NILl~~~~~~kL~DFG~a~~~~~~~~~----------------------------------------------------- 198 (370)
T cd05621 172 NMLLDKHGHLKLADFGTCMKMDETGMV----------------------------------------------------- 198 (370)
T ss_pred HEEECCCCCEEEEecccceecccCCce-----------------------------------------------------
Confidence 999999999999999998653211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----CCccCcchhHHHHHHHhhc
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvil~ell~ 267 (879)
.....+||+.|+|||++.+.. ++.++|||||||+||||++
T Consensus 199 ------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~ 242 (370)
T cd05621 199 ------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV 242 (370)
T ss_pred ------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh
Confidence 012247899999999997643 7899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
||................ ...|.....+..+.+++.+||..+|.+ |+++.|+++||||+..
T Consensus 243 G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 243 GDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred CCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 886554433333333222 122333345778899999999865544 8999999999999863
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=292.99 Aligned_cols=251 Identities=16% Similarity=0.211 Sum_probs=163.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ...+|+||||++||+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||
T Consensus 54 il~~l~h~~iv~l~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp 129 (381)
T cd05626 54 ILAEADNEWVVKLYY-SFQD--KDNLYFVMDYIPGGDMMSLLIRM-EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKP 129 (381)
T ss_pred HHHhcCCCCeeeeEE-EEec--CCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcH
Confidence 345567888888776 4443 34689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||||+..+++||+|||+++.+.............. ........ ..... ..+.
T Consensus 130 ~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~-----~~~~~---~~~~ 182 (381)
T cd05626 130 DNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSH-------------------IRQDSMEP-----SDLWD---DVSN 182 (381)
T ss_pred HHEEECCCCCEEEeeCcCCccccccccccccccccc-------------------ccccccCc-----ccccc---cccc
Confidence 999999999999999999876422211000000000 00000000 00000 0000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
...+... +..... ... ..........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 183 ~~~~~~~---------~~~~~~------~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~ 246 (381)
T cd05626 183 CRCGDRL---------KTLEQR------ATK-QHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQP 246 (381)
T ss_pred ccccccc---------chhhcc------ccc-cccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCC
Confidence 0000000 000000 000 000001134689999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhc--CCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L--~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||............+. .....+.....++.+.+||.+|| ..+|..||++.+++.||||...
T Consensus 247 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 247 PFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred CCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 8865544433333332 12222333456788999999955 4555669999999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=293.74 Aligned_cols=251 Identities=15% Similarity=0.148 Sum_probs=165.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. .+.+ ...+|+|||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||
T Consensus 54 il~~~~h~~iv~~~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp 129 (382)
T cd05625 54 ILAEADNEWVVRLYY-SFQD--KDNLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKP 129 (382)
T ss_pred HHHhCCCCcCCeEEE-EEEe--CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 345567888888777 4443 34689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.+......... ...+. .......+......
T Consensus 130 ~NILl~~~g~~kL~DFGla~~~~~~~~~~~~-------------------------~~~~~--~~~~~~~~~~~~~~--- 179 (382)
T cd05625 130 DNILIDRDGHIKLTDFGLCTGFRWTHDSKYY-------------------------QSGDH--VRQDSMDFSNEWGD--- 179 (382)
T ss_pred HHEEECCCCCEEEeECCCCcccccccccccc-------------------------ccccc--cccccccccccccc---
Confidence 9999999999999999998654211000000 00000 00000000000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....+..+.....+.... ...........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 180 ------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~ 246 (382)
T cd05625 180 ------------PANCRCGDRLKPLERRAA-RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 246 (382)
T ss_pred ------------cccccccccccchhhhhc-cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCC
Confidence 000000000000000000 0000011234689999999999999899999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~ 329 (879)
||.........+..+.. ....|.....++.+.++|.+|+ .+|.+|++ +.++++||||....
T Consensus 247 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~ 312 (382)
T cd05625 247 PFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID 312 (382)
T ss_pred CCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence 88665544444443322 2222333456788999999976 59999987 99999999998753
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=285.23 Aligned_cols=194 Identities=19% Similarity=0.173 Sum_probs=158.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|+|++...+ ++.+ +.+.|+|||++.|+-|.+.+...+ ....++..|++||+.||+|||++|||||||||
T Consensus 369 ~~~~~~h~niv~~~~-v~~~--~~~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp 443 (612)
T KOG0603|consen 369 SLLVRDHPNIVKSHD-VYED--GKEIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDLKP 443 (612)
T ss_pred hhhhcCCCcceeecc-eecC--CceeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCCCh
Confidence 344578888877666 6654 456899999999999988885542 23378889999999999999999999999999
Q ss_pred cceee-ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 111 SCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 111 ~NIll-~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
+|||+ +..++++|+|||.++..... .
T Consensus 444 ~NIL~~~~~g~lrltyFG~a~~~~~~-~---------------------------------------------------- 470 (612)
T KOG0603|consen 444 GNILLDGSAGHLRLTYFGFWSELERS-C---------------------------------------------------- 470 (612)
T ss_pred hheeecCCCCcEEEEEechhhhCchh-h----------------------------------------------------
Confidence 99999 58899999999999774222 0
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
...+=|..|.|||++....|++++|||||||+||+||+
T Consensus 471 ----------------------------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~ 510 (612)
T KOG0603|consen 471 ----------------------------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGR 510 (612)
T ss_pred ----------------------------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCC
Confidence 00133778999999998889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||.........+..+..+ +.....+..+++|+.+||+.||.+||++.+++.||||
T Consensus 511 tp~~~~P~~~ei~~~i~~~---~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 511 TLFAAHPAGIEIHTRIQMP---KFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CccccCCchHHHHHhhcCC---ccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 776665554455444433 2235678899999999999999999999999999999
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=297.32 Aligned_cols=209 Identities=16% Similarity=0.197 Sum_probs=151.2
Q ss_pred eeecccccccCCCCCCc---cccc--ccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 30 VELTHGDHLRNQGGLSG---VCEN--EAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
..+...+|++++..++. .|.. +....+|++|||+++ +|.+++. .....+++..++.|+.||+.||+|||++
T Consensus 111 ~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~ 189 (440)
T PTZ00036 111 LIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK 189 (440)
T ss_pred HHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34555678888765441 1211 222346789999975 6777663 3346789999999999999999999999
Q ss_pred CcccccCCCcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 102 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 102 givHrDlKP~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
|||||||||+||||+..+ .+||+|||+++......
T Consensus 190 ~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~-------------------------------------------- 225 (440)
T PTZ00036 190 FICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ-------------------------------------------- 225 (440)
T ss_pred CEecCCcCHHHEEEcCCCCceeeeccccchhccCCC--------------------------------------------
Confidence 999999999999998665 69999999997532110
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLG 259 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlG 259 (879)
.....+||++|+|||++.+. .|+.++||||||
T Consensus 226 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 258 (440)
T PTZ00036 226 -----------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLG 258 (440)
T ss_pred -----------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHH
Confidence 01224789999999998765 599999999999
Q ss_pred HHHHHhhc---CCCCChhhHhHHhhhccc------------------CCCc---------hhhccChhhHHHHHHhcCCC
Q 002801 260 VLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPP---------QLLLKFPKEASFCLWLLHPE 309 (879)
Q Consensus 260 vil~ell~---pf~~~~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~li~~~L~~d 309 (879)
|+||||++ ||............+... .++. .+...++++.+||.+||..|
T Consensus 259 vil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~d 338 (440)
T PTZ00036 259 CIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYE 338 (440)
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCC
Confidence 99999999 665443322221111100 0000 01124567889999999999
Q ss_pred CCCCCCHHHHhhcccccCCcC
Q 002801 310 PSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 310 P~~Rpt~~evl~hp~~~~~~~ 330 (879)
|.+|||+.|+|+||||..+..
T Consensus 339 P~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 339 PLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred hhHCcCHHHHhCChhHHhhhc
Confidence 999999999999999986543
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=291.37 Aligned_cols=242 Identities=12% Similarity=0.150 Sum_probs=163.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|||||||.|++|.+++... ..+++.+++.|+.||+.||+|||++||+||||||
T Consensus 54 il~~l~h~~iv~~~~-~~~~--~~~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp 129 (364)
T cd05599 54 ILAEADNPWVVKLYY-SFQD--ENYLYLIMEYLPGGDMMTLLMKK-DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKP 129 (364)
T ss_pred HHHhCCCCCCcceEE-EEEc--CCeEEEEECCCCCcHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCH
Confidence 344557888888776 4433 44689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++........... ....... ..++ ... ...+.
T Consensus 130 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~--~~~~~~~-----------------~~~~----------~~~-~~~~~ 179 (364)
T cd05599 130 DNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY--RILSHAL-----------------PSNF----------LDF-ISKPM 179 (364)
T ss_pred HHeEECCCCCEEEeecccceecccccccccc--ccccccc-----------------cccc----------ccc-ccccc
Confidence 9999999999999999999764322111000 0000000 0000 000 00000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
....... ...... .......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 180 ~~~~~~~-------------------~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 180 SSKRKAE-------------------TWKRNR---RALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred ccccccc-------------------chhhcc---cccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 0000000 000000 000123589999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~ 329 (879)
||............+.. ....+.....++.+.+||.+||. +|.+|++ +.++++||||....
T Consensus 238 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~ 303 (364)
T cd05599 238 PFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD 303 (364)
T ss_pred CCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence 77655443333222221 11122223456788999999996 9999987 99999999998753
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=288.03 Aligned_cols=199 Identities=18% Similarity=0.212 Sum_probs=155.9
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..+. ++. .....|+||||+.|++|..++.+. +.+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 54 ~~p~i~~~~~-~~~--~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili 129 (330)
T cd05586 54 ESPFIVGLKF-SFQ--TDSDLYLVTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL 129 (330)
T ss_pred CCCcCcceEE-EEe--cCCeEEEEEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE
Confidence 6888877666 333 234689999999999999999654 578999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------------------- 151 (330)
T cd05586 130 DATGHIALCDFGLSKANLTDNK---------------------------------------------------------- 151 (330)
T ss_pred CCCCCEEEecCCcCcCCCCCCC----------------------------------------------------------
Confidence 9999999999999864211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---CCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
.....+||..|+|||++.+.. ++.++|||||||+||||++ ||..
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~ 199 (330)
T cd05586 152 --------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYA 199 (330)
T ss_pred --------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCC
Confidence 012247899999999997654 8999999999999999999 8865
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC----CHHHHhhcccccCCc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEPR 329 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp----t~~evl~hp~~~~~~ 329 (879)
...... ...+............++.+.+|+.+||.+||.+|| ++.++++||||....
T Consensus 200 ~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~ 260 (330)
T cd05586 200 EDTQQM-YRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADID 260 (330)
T ss_pred CCHHHH-HHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence 543332 223322222111123567889999999999999998 789999999998643
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=286.19 Aligned_cols=201 Identities=19% Similarity=0.160 Sum_probs=159.4
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+. .....|++|||+.|++|..++.+. +.+++.+++.++.||+.||+|||++||+||||||+
T Consensus 50 l~~~~hp~iv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~ 125 (325)
T cd05604 50 LKNVKHPFLVGLHY-SFQ--TTEKLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPE 125 (325)
T ss_pred HHhCCCCCCccEEE-EEe--cCCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHH
Confidence 44567888888766 343 244689999999999999998654 57899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.......
T Consensus 126 NIll~~~~~~kL~DfG~~~~~~~~~~------------------------------------------------------ 151 (325)
T cd05604 126 NILLDSQGHVVLTDFGLCKEGIAQSD------------------------------------------------------ 151 (325)
T ss_pred HeEECCCCCEEEeecCCcccCCCCCC------------------------------------------------------
Confidence 99999999999999999864211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ |
T Consensus 152 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~p 195 (325)
T cd05604 152 ------------------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred ------------------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCC
Confidence 0123478999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~~~~ 328 (879)
|............+... . ......+..+.+++.+||..+|.+||++ .+++.||||...
T Consensus 196 f~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 196 FYCRDVAEMYDNILHKP-L-VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCHHHHHHHHHcCC-c-cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 76554433333333222 1 1122456778899999999999999986 589999999864
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=253.48 Aligned_cols=270 Identities=16% Similarity=0.236 Sum_probs=224.2
Q ss_pred ceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
++++++.|.+.-+|.+..-.- ..+. .++.+|..+|..|.||||.+++++|+.|..+.+||+.++..... ...
T Consensus 238 yLAsaSkD~Taiiw~v~~d~~-~kl~-~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~------y~~ 309 (519)
T KOG0293|consen 238 YLASASKDSTAIIWIVVYDVH-FKLK-KTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHL------YPS 309 (519)
T ss_pred eEeeccCCceEEEEEEecCcc-eeee-eeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhh------ccc
Confidence 348889999999997654222 1111 34569999999999999999999999999999999998543222 112
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccC-CCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH-ERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h-~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
++.-.++|++|.|. +..+++|+.|+++..||++ |......++- ...|++++.++ ||+.+++...|..|++++.++.
T Consensus 310 ~~~~S~~sc~W~pD-g~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~-Dgk~vl~v~~d~~i~l~~~e~~ 386 (519)
T KOG0293|consen 310 GLGFSVSSCAWCPD-GFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITY-DGKYVLLVTVDKKIRLYNREAR 386 (519)
T ss_pred CcCCCcceeEEccC-CceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcC-CCcEEEEEecccceeeechhhh
Confidence 24567999999995 8899999999999999996 4434444332 25699999999 9999999999999999999988
Q ss_pred ceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEE--EEc--CCCEEEEEEcCCcE
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYV--KFV--DATTLVSASTDNTL 769 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v--~fs--~~~~l~s~s~D~~i 769 (879)
.....+..+.+|++++.+.+ ++++++.-.+..|++||+...+ .+..+.||+..-.-+ +|- +..+++|||.|++|
T Consensus 387 ~dr~lise~~~its~~iS~d-~k~~LvnL~~qei~LWDl~e~~-lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kv 464 (519)
T KOG0293|consen 387 VDRGLISEEQPITSFSISKD-GKLALVNLQDQEIHLWDLEENK-LVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKV 464 (519)
T ss_pred hhhccccccCceeEEEEcCC-CcEEEEEcccCeeEEeecchhh-HHHHhhcccccceEEEeccCCCCcceEEecCCCceE
Confidence 88878888999999999999 8999999999999999999766 477888997653333 453 77899999999999
Q ss_pred EEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecC
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKA 823 (879)
Q Consensus 770 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~ 823 (879)
+||+..++ +++..+.||...|++|+|+|.+. ++|++|.||+|+||-..
T Consensus 465 yIWhr~sg------kll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 465 YIWHRISG------KLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred EEEEccCC------ceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 99999997 89999999999999999999875 89999999999999765
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-31 Score=286.42 Aligned_cols=206 Identities=18% Similarity=0.200 Sum_probs=177.8
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcC--cc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG--IV 104 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g--iv 104 (879)
.+...|...+|+|++.+|.. ..+..+...-+|.|++..|+|++|+++. +.++...++.+++||++||.|||++. ||
T Consensus 90 ~Ev~lLKsL~H~NIirfy~S-W~d~~n~~in~iTEL~TSGtLr~Y~kk~-~~vn~kaik~W~RQILkGL~yLHs~~PPII 167 (632)
T KOG0584|consen 90 SEVHLLKSLKHPNIIRFYDS-WVDTDNKTINFITELFTSGTLREYRKKH-RRVNIKAIKSWCRQILKGLVYLHSQDPPII 167 (632)
T ss_pred HHHHHHccCCCCceeeeeeh-eecCCCceeeeeeecccCCcHHHHHHHh-ccCCHHHHHHHHHHHHHHhhhhhcCCCCcc
Confidence 33445666899999999994 4455556788999999999999999776 57899999999999999999999995 99
Q ss_pred cccCCCcceeec-cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 105 VHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 105 HrDlKP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
|||||.+||+|+ ..|.|||.|+|+|......
T Consensus 168 HRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s------------------------------------------------ 199 (632)
T KOG0584|consen 168 HRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS------------------------------------------------ 199 (632)
T ss_pred ccccccceEEEcCCcCceeecchhHHHHhhcc------------------------------------------------
Confidence 999999999997 4599999999999763111
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
.....+|||.|||||+.. ..|+..+||||||+++.
T Consensus 200 --------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmL 234 (632)
T KOG0584|consen 200 --------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCML 234 (632)
T ss_pred --------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhhhHHHH
Confidence 113369999999999986 66999999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||+| ||.........+..+..+..|..+.. ..|+++.||.+||.. .++|||+.|+|.||||+..
T Consensus 235 EMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 235 EMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred HHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 9999 99999999999999999988876654 357899999999999 9999999999999999864
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=249.68 Aligned_cols=239 Identities=19% Similarity=0.306 Sum_probs=217.2
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
..|.+.|.|+++.|. ..++++|+.|++++|||+.+++...++.+|...|..+++|+ -..++.+++.|+.|+.||++..
T Consensus 148 ~gHlgWVr~vavdP~-n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~-rHpYlFs~gedk~VKCwDLe~n 225 (460)
T KOG0285|consen 148 SGHLGWVRSVAVDPG-NEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSK-RHPYLFSAGEDKQVKCWDLEYN 225 (460)
T ss_pred hhccceEEEEeeCCC-ceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecc-cCceEEEecCCCeeEEEechhh
Confidence 468899999999997 89999999999999999999999999999999999999998 7789999999999999999999
Q ss_pred ceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEE
Q 002801 694 VSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKL 771 (879)
Q Consensus 694 ~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~l 771 (879)
+.|+.+..+ +.|.|++.+|. -..|++|+.|.++++||+|+.. .+.++.||+.+|..|.+. .+..++|||.|++|++
T Consensus 226 kvIR~YhGHlS~V~~L~lhPT-ldvl~t~grDst~RvWDiRtr~-~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrl 303 (460)
T KOG0285|consen 226 KVIRHYHGHLSGVYCLDLHPT-LDVLVTGGRDSTIRVWDIRTRA-SVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRL 303 (460)
T ss_pred hhHHHhccccceeEEEecccc-ceeEEecCCcceEEEeeecccc-eEEEecCCCCcceeEEeecCCCceEEecCCceEEE
Confidence 999887754 67999999998 7899999999999999999987 499999999999999998 6667999999999999
Q ss_pred EecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCE
Q 002801 772 WDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFI 851 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 851 (879)
||++.+ +...++..|...|.+++.+|....+|++|.|+ |+-|++..+.-+.. +.+|..-|
T Consensus 304 WDl~ag------kt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~n-------------lsgh~~ii 363 (460)
T KOG0285|consen 304 WDLRAG------KTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQN-------------LSGHNAII 363 (460)
T ss_pred eeeccC------ceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhc-------------ccccccee
Confidence 999998 66788889999999999999999999999886 99999887655443 25778889
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 852 SSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 852 ~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
++++-+.|+ ++++|+..|.|.+||.
T Consensus 364 ntl~~nsD~--v~~~G~dng~~~fwdw 388 (460)
T KOG0285|consen 364 NTLSVNSDG--VLVSGGDNGSIMFWDW 388 (460)
T ss_pred eeeeeccCc--eEEEcCCceEEEEEec
Confidence 999998776 5999999999999983
|
|
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-30 Score=284.52 Aligned_cols=196 Identities=16% Similarity=0.180 Sum_probs=151.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------------------------------- 76 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------------------------------- 76 (879)
+|+|++..++ +|..+ ....|++|||++||+|.++|....
T Consensus 69 ~h~niv~~~~-~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (338)
T cd05102 69 NHLNVVNLLG-ACTKP-NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLF 146 (338)
T ss_pred cCcceeeEEe-EecCC-CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccc
Confidence 7888887776 55432 345799999999999999985421
Q ss_pred ----------------------CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCC
Q 002801 77 ----------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134 (879)
Q Consensus 77 ----------------------~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~ 134 (879)
.++++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~ 226 (338)
T cd05102 147 SRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYK 226 (338)
T ss_pred cccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeeccccccccc
Confidence 2477889999999999999999999999999999999999999999999999875321
Q ss_pred CCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccc
Q 002801 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 214 (879)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 214 (879)
....
T Consensus 227 ~~~~---------------------------------------------------------------------------- 230 (338)
T cd05102 227 DPDY---------------------------------------------------------------------------- 230 (338)
T ss_pred Ccch----------------------------------------------------------------------------
Confidence 1000
Q ss_pred hhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCch
Q 002801 215 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290 (879)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~ 290 (879)
.......++..|+|||++.+..++.++|||||||+||||++ ||............+.....+..
T Consensus 231 ------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 298 (338)
T cd05102 231 ------------VRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA 298 (338)
T ss_pred ------------hcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC
Confidence 00011245678999999999889999999999999999985 77544333333333333333333
Q ss_pred hhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 291 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 291 ~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
....++.+.+++.+||..||.+|||+.++++
T Consensus 299 ~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 299 PENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 4456678999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-31 Score=287.57 Aligned_cols=226 Identities=19% Similarity=0.193 Sum_probs=179.2
Q ss_pred ccccccCCCCCcccccc--cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCC--ChhHHH
Q 002801 10 RFGVRGDDSNDFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV--DVYECL 85 (879)
Q Consensus 10 ~~~~~~~~~~~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l--~~~~~~ 85 (879)
|++++.-+..++++-.- .+...-++..|+|+|..++. | .+ +...-|.||.++||+|..+|+..-+++ ++..+-
T Consensus 602 rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs-~-se-nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~ 678 (1226)
T KOG4279|consen 602 RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGS-V-SE-NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMN 678 (1226)
T ss_pred EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhc-c-CC-CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHH
Confidence 45555555555555221 23334456788888887772 2 22 224567899999999999998877788 888999
Q ss_pred HHHHHHHHHHHhhhhcCcccccCCCcceeec-cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhh
Q 002801 86 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 164 (879)
Q Consensus 86 ~i~~qi~~~l~~lHs~givHrDlKP~NIll~-~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (879)
.+.+||++||.|||++.|||||||-+|+|++ -+|.+||.|||.++.+..- |
T Consensus 679 fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi------n---------------------- 730 (1226)
T KOG4279|consen 679 FYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI------N---------------------- 730 (1226)
T ss_pred HHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC------C----------------------
Confidence 9999999999999999999999999999996 7899999999999774211 0
Q ss_pred hccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccc
Q 002801 165 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 244 (879)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 244 (879)
|+ .-.+.||..|||||++
T Consensus 731 -------------------------------------------------------------P~-TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 731 -------------------------------------------------------------PC-TETFTGTLQYMAPEVI 748 (1226)
T ss_pred -------------------------------------------------------------cc-ccccccchhhhChHhh
Confidence 00 1236899999999999
Q ss_pred cCCC--CCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhc-ccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 245 AGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 245 ~~~~--~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
..++ |+.++|||||||++.||.| ||.......++|..+. ...-||.+...+.+++.||.+|+.+||.+||++.+
T Consensus 749 DqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~ 828 (1226)
T KOG4279|consen 749 DQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKD 828 (1226)
T ss_pred ccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHH
Confidence 8765 9999999999999999999 8876666666666543 33456777778889999999999999999999999
Q ss_pred HhhcccccCC
Q 002801 319 LLQSEFLNEP 328 (879)
Q Consensus 319 vl~hp~~~~~ 328 (879)
+|+.||+...
T Consensus 829 LL~DpFlq~~ 838 (1226)
T KOG4279|consen 829 LLQDPFLQHN 838 (1226)
T ss_pred hccCcccccC
Confidence 9999999753
|
|
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-30 Score=284.61 Aligned_cols=184 Identities=18% Similarity=0.238 Sum_probs=149.5
Q ss_pred ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCC
Q 002801 53 AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 53 ~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~ 132 (879)
....|+||||+.||+|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 73 MDRLYFVMEYVNGGDLMYQIQQV-GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 34689999999999999998554 46899999999999999999999999999999999999999999999999998642
Q ss_pred CCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccc
Q 002801 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (879)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (879)
.....
T Consensus 152 ~~~~~--------------------------------------------------------------------------- 156 (323)
T cd05616 152 MWDGV--------------------------------------------------------------------------- 156 (323)
T ss_pred CCCCC---------------------------------------------------------------------------
Confidence 11100
Q ss_pred cchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCc
Q 002801 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289 (879)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~ 289 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ ||..................
T Consensus 157 ---------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~-- 219 (323)
T cd05616 157 ---------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVA-- 219 (323)
T ss_pred ---------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--
Confidence 0122478999999999999999999999999999999999 77655443333333332222
Q ss_pred hhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccccCCc
Q 002801 290 QLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEPR 329 (879)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~~~~~ 329 (879)
.+...++.+.+++.+||+.||.+|+++ .++++||||....
T Consensus 220 ~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~ 264 (323)
T cd05616 220 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 264 (323)
T ss_pred CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCC
Confidence 223466889999999999999999984 8999999998754
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-31 Score=310.86 Aligned_cols=232 Identities=19% Similarity=0.210 Sum_probs=189.2
Q ss_pred cccccccccCCCCCc---ccccc-cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChh
Q 002801 7 RGERFGVRGDDSNDF---ELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~---~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~ 82 (879)
.|+-.+++...-+++ .|... +++-++...+|+|+|..|+ +..... ..||.||||+||+|.+++... +..++.
T Consensus 1259 tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyG-VEvHRe--kv~IFMEyC~~GsLa~ll~~g-ri~dE~ 1334 (1509)
T KOG4645|consen 1259 TGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYG-VEVHRE--KVYIFMEYCEGGSLASLLEHG-RIEDEM 1334 (1509)
T ss_pred ccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCc-eeecHH--HHHHHHHHhccCcHHHHHHhc-chhhhh
Confidence 456666654444433 33322 4555677889999999888 665443 468899999999999999554 567888
Q ss_pred HHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhh
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
..+.+..|++.||+|||++|||||||||+||+|+.+|.+|+.|||.|.......
T Consensus 1335 vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~-------------------------- 1388 (1509)
T KOG4645|consen 1335 VTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA-------------------------- 1388 (1509)
T ss_pred HHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCch--------------------------
Confidence 999999999999999999999999999999999999999999999997642220
Q ss_pred hhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccc
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
+++|......+||+.|||||
T Consensus 1389 ------------------------------------------------------------~~~~~el~~~~GT~~YMAPE 1408 (1509)
T KOG4645|consen 1389 ------------------------------------------------------------QTMPGELQSMMGTPMYMAPE 1408 (1509)
T ss_pred ------------------------------------------------------------hcCCHHHHhhcCCchhcCch
Confidence 01111223469999999999
Q ss_pred cccCCC---CCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 243 ELAGAP---VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 243 ~~~~~~---~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
++.+.. -.-++|||||||+..||+| ||..-+...+.|-.+..+..|+.+...++...+||..||..||.+|.++
T Consensus 1409 vit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~ 1488 (1509)
T KOG4645|consen 1409 VITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTA 1488 (1509)
T ss_pred hhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHH
Confidence 998754 5678999999999999999 9988888888888888888888888889999999999999999999999
Q ss_pred HHHhhcccccCC
Q 002801 317 GELLQSEFLNEP 328 (879)
Q Consensus 317 ~evl~hp~~~~~ 328 (879)
.|+++|.|-+.-
T Consensus 1489 ~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1489 SQLLEHAFGKSC 1500 (1509)
T ss_pred HHHHHhhccccc
Confidence 999999998753
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-30 Score=282.58 Aligned_cols=197 Identities=20% Similarity=0.191 Sum_probs=157.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ ++.+ ....|+||||+.|++|..++.+. +.+++.++..++.||+.||.|||++||+||||||+|||+
T Consensus 54 ~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill 129 (318)
T cd05570 54 KHPFLTQLHS-CFQT--KDRLFFVMEYVNGGDLMFHIQRS-GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL 129 (318)
T ss_pred CCCCccceee-EEEc--CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE
Confidence 6778877666 4433 34689999999999999998654 478999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------------------- 151 (318)
T cd05570 130 DSEGHIKIADFGMCKEGILGGV---------------------------------------------------------- 151 (318)
T ss_pred CCCCcEEecccCCCeecCcCCC----------------------------------------------------------
Confidence 9999999999999854210000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 152 --------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~ 199 (318)
T cd05570 152 --------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGD 199 (318)
T ss_pred --------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCC
Confidence 0022478999999999999999999999999999999999 77654
Q ss_pred hhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccccCC
Q 002801 273 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 328 (879)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~~~~ 328 (879)
............... .....++.+.+||.+||+.||.+||++ .++++||||...
T Consensus 200 ~~~~~~~~i~~~~~~--~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 200 DEDELFQSILEDEVR--YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHHHHHHHcCCCC--CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 433322222222222 223456788999999999999999999 999999999864
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.1e-29 Score=245.18 Aligned_cols=292 Identities=16% Similarity=0.282 Sum_probs=236.9
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCccc---------CcCcccccceEE--eccCCCeeEEEEeCCCCC
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII---------NENRDIHYPVVE--MASRSKLSSICWNSYIKS 631 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~---------~~~~~~~~~~~~--~~~~~~i~~l~~~~~~~~ 631 (879)
-+..|.+++.+.+|+|||.++|||+.|-.|||+|++..+ ....+.+.|++. ..|...|+++.|+|. ..
T Consensus 107 ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPr-e~ 185 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPR-ET 185 (430)
T ss_pred EEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecch-hh
Confidence 345799999999999999999999999999999997421 112222334432 468899999999996 89
Q ss_pred eEEEeeCCCcEEEEEcCCCeEEEEec--cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe----cCCce
Q 002801 632 QIASSNFEGVVQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK----TKANV 705 (879)
Q Consensus 632 ~l~s~~~dg~V~vwd~~~~~~~~~~~--~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~----~~~~v 705 (879)
+|++|+.|++|++||..+....+-++ ....+|.++.|+| .|.+++.|.+..++++||+++.++...-. +.+.|
T Consensus 186 ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai 264 (430)
T KOG0640|consen 186 ILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAI 264 (430)
T ss_pred eEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecC-CCceEEEecCCCceeEEeccceeEeeecCcccccccce
Confidence 99999999999999997654332222 2346899999999 99999999999999999999998876553 45679
Q ss_pred EEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEc-cCC-CCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCccccc
Q 002801 706 CCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI-GHN-KTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVI 782 (879)
Q Consensus 706 ~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~-~h~-~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~ 782 (879)
++|.+++. +++.++||.||.|++||--+.++ +.++. .|. ..|++..|. ++++++|.+.|..+++|.+.++
T Consensus 265 ~~V~Ys~t-~~lYvTaSkDG~IklwDGVS~rC-v~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~----- 337 (430)
T KOG0640|consen 265 TQVRYSST-GSLYVTASKDGAIKLWDGVSNRC-VRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTG----- 337 (430)
T ss_pred eEEEecCC-ccEEEEeccCCcEEeeccccHHH-HHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCC-----
Confidence 99999999 89999999999999999888775 55554 564 479999999 9999999999999999999997
Q ss_pred CCceEEEeCCCC-----cEEEEEEecCCCEEEEEeC-CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEE
Q 002801 783 DTPLHSFTGHTN-----VKNFVGLSVWDGYVATGSE-TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW 856 (879)
Q Consensus 783 ~~~~~~~~~h~~-----~v~~v~~sp~~~~lasgs~-Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 856 (879)
+++..+.|-.. --+...|+....|++.-.+ .+++.-||-++...+.-+. -+|++.|+.+.-
T Consensus 338 -R~l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s------------lgHn~a~R~i~H 404 (430)
T KOG0640|consen 338 -RMLKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS------------LGHNGAVRWIVH 404 (430)
T ss_pred -ceEEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcc------------cCCCCCceEEEe
Confidence 78888876421 1233457777777776654 5779999988765544332 578999999999
Q ss_pred eCCCCcEEEEEeCCCcEEEEE
Q 002801 857 RGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 857 ~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
+|.++ .+.+|+.|-.+++|-
T Consensus 405 SP~~p-~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 405 SPVEP-AFMTCSDDFRARFWY 424 (430)
T ss_pred CCCCC-ceeeecccceeeeee
Confidence 99999 999999999999994
|
|
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-30 Score=285.01 Aligned_cols=199 Identities=16% Similarity=0.203 Sum_probs=154.3
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
.|++++..+. .+. .....|+||||++|++|..++.+. +.+++.+++.|+.||+.||+|||++||+||||||+|||+
T Consensus 54 ~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili 129 (327)
T cd05617 54 SNPFLVGLHS-CFQ--TTSRLFLVIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLL 129 (327)
T ss_pred CCCCEeeEEE-EEE--eCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 5667766655 333 234689999999999999988554 468999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+||+|||+++.......
T Consensus 130 ~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------------------- 151 (327)
T cd05617 130 DADGHIKLTDYGMCKEGLGPGD---------------------------------------------------------- 151 (327)
T ss_pred eCCCCEEEeccccceeccCCCC----------------------------------------------------------
Confidence 9999999999999864211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 272 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~ 272 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ ||...
T Consensus 152 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~ 199 (327)
T cd05617 152 --------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDII 199 (327)
T ss_pred --------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCcc
Confidence 0122478999999999999999999999999999999999 77421
Q ss_pred h------hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC------HHHHhhcccccCCc
Q 002801 273 E------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEPR 329 (879)
Q Consensus 273 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~evl~hp~~~~~~ 329 (879)
. ........+... ..+.+...++.+.+++.+||..||.+|++ +.+++.||||+...
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~ 267 (327)
T cd05617 200 TDNPDMNTEDYLFQVILEK-PIRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSID 267 (327)
T ss_pred CCCcccccHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence 1 111122222221 11222345678899999999999999998 57999999998764
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-30 Score=278.89 Aligned_cols=205 Identities=17% Similarity=0.173 Sum_probs=156.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++.... ++.. ....|++|||++|++|..++. .....+++.++..++.||+.||+|||++||+|||
T Consensus 46 il~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 122 (280)
T cd05608 46 ILAKVHSRFIVSLAY-AFQT--KTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRD 122 (280)
T ss_pred HHHhCCCCcEeeeeE-EEcC--CCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 344556777766554 4433 346899999999999998773 2335689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.+|++|||+++.......
T Consensus 123 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 152 (280)
T cd05608 123 LKPENVLLDNDGNVRISDLGLAVELKDGQS-------------------------------------------------- 152 (280)
T ss_pred CCHHHEEECCCCCEEEeeCccceecCCCCc--------------------------------------------------
Confidence 999999999999999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 153 ----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~ 192 (280)
T cd05608 153 ----------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIA 192 (280)
T ss_pred ----------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHh
Confidence 0012468999999999999999999999999999999999
Q ss_pred ---CCCCChhhH---hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 ---PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 ---pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||....... .....+... ........++.+.+++.+||+.||++|| +++++++||||+...
T Consensus 193 g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~ 264 (280)
T cd05608 193 ARGPFRARGEKVENKELKQRILND-SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264 (280)
T ss_pred CCCCCCCCCcchhHHHHHHhhccc-CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCC
Confidence 775432211 111111111 1122234567889999999999999999 889999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=246.02 Aligned_cols=291 Identities=17% Similarity=0.275 Sum_probs=238.7
Q ss_pred CCCCcccccccCCCCCCCCCccccccccccCCCccccccCCCCceecccccCceEEEeecCcEEE---EEe-----c---
Q 002801 492 SGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK---ADL-----N--- 560 (879)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~w~~~~~~~~---~~l-----~--- 560 (879)
++|..-|++.||+||.++ ++|+.|-.||+.|+...-.. .+. +
T Consensus 110 ~HK~~cR~aafs~DG~lv---------------------------ATGsaD~SIKildvermlaks~~~em~~~~~qa~h 162 (430)
T KOG0640|consen 110 SHKSPCRAAAFSPDGSLV---------------------------ATGSADASIKILDVERMLAKSKPKEMISGDTQARH 162 (430)
T ss_pred ecccceeeeeeCCCCcEE---------------------------EccCCcceEEEeehhhhhhhcchhhhccCCcccCC
Confidence 456667888999999887 88899999999998732110 000 1
Q ss_pred --cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeC
Q 002801 561 --QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638 (879)
Q Consensus 561 --~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~ 638 (879)
-.+++.|.+.|+++.|+|-..+|++|+.|++||+||+... ..+.....+....+|.||+|+|. +++|+.|..
T Consensus 163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~-----saKrA~K~~qd~~~vrsiSfHPs-GefllvgTd 236 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKT-----SAKRAFKVFQDTEPVRSISFHPS-GEFLLVGTD 236 (430)
T ss_pred ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccH-----HHHHHHHHhhccceeeeEeecCC-CceEEEecC
Confidence 1257899999999999999999999999999999999852 22222333456678999999996 999999999
Q ss_pred CCcEEEEEcCCCeEEEEe---ccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec---CCceEEEEeeC
Q 002801 639 EGVVQVWDVSRSQVLTEM---REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT---KANVCCVQFPL 712 (879)
Q Consensus 639 dg~V~vwd~~~~~~~~~~---~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~---~~~v~~v~~~p 712 (879)
..++++||++|.|+...- ..|++.|++|.+++ ++++.++||.||.|+|||--+++++.+|.. ++.||+..|..
T Consensus 237 Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~-t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftk 315 (430)
T KOG0640|consen 237 HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSS-TGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTK 315 (430)
T ss_pred CCceeEEeccceeEeeecCcccccccceeEEEecC-CccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEcc
Confidence 999999999999987654 46899999999999 999999999999999999999999998873 56799999999
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC-----CCCEEEEEEc-CCCEEEEEEc-CCcEEEEecCCCcccccCCc
Q 002801 713 DSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH-----NKTVSYVKFV-DATTLVSAST-DNTLKLWDLSMCTSRVIDTP 785 (879)
Q Consensus 713 ~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h-----~~~V~~v~fs-~~~~l~s~s~-D~~i~lwd~~~~~~~~~~~~ 785 (879)
+ ++++++.+.|..|++|.+.+++. +..+.|- ..--+...|+ ..++++.-.. .+.+.-||.++.. +.
T Consensus 316 n-~kyiLsSG~DS~vkLWEi~t~R~-l~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtad-----r~ 388 (430)
T KOG0640|consen 316 N-GKYILSSGKDSTVKLWEISTGRM-LKEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTAD-----RV 388 (430)
T ss_pred C-CeEEeecCCcceeeeeeecCCce-EEEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchh-----hh
Confidence 9 99999999999999999999984 7666653 1223556777 7777776543 4789999999873 23
Q ss_pred eEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecC
Q 002801 786 LHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 786 ~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~ 823 (879)
...-.||.+.+..+..||.+..+++||.|..+++|..+
T Consensus 389 ~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 389 ALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYRR 426 (430)
T ss_pred hhcccCCCCCceEEEeCCCCCceeeecccceeeeeeec
Confidence 33345899999999999999999999999999999765
|
|
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-30 Score=287.10 Aligned_cols=202 Identities=17% Similarity=0.194 Sum_probs=152.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++||++. ++|.+++......+++.+++.|+.||+.||.|||++|||||||||
T Consensus 110 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp 185 (357)
T PHA03209 110 LLQNVNHPSVIRMKD-TLVS--GAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKT 185 (357)
T ss_pred HHHhCCCCCCcChhh-eEEe--CCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 455678888888777 4443 345799999994 689998866667799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++..+.+||+|||+++......
T Consensus 186 ~Nill~~~~~~kl~DfG~a~~~~~~~------------------------------------------------------ 211 (357)
T PHA03209 186 ENIFINDVDQVCIGDLGAAQFPVVAP------------------------------------------------------ 211 (357)
T ss_pred HHEEECCCCCEEEecCccccccccCc------------------------------------------------------
Confidence 99999999999999999986421000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......||..|+|||++.+..++.++|||||||+||||++
T Consensus 212 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~ 254 (357)
T PHA03209 212 -------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPS 254 (357)
T ss_pred -------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCC
Confidence 0012468999999999999899999999999999999997
Q ss_pred CCCCChhh----------HhHHhhhcc-cCCCch-------------------------------hhccChhhHHHHHHh
Q 002801 268 PFSTGEEK----------TRTMSSLRH-RVLPPQ-------------------------------LLLKFPKEASFCLWL 305 (879)
Q Consensus 268 pf~~~~~~----------~~~~~~~~~-~~~~~~-------------------------------~~~~~~~~~~li~~~ 305 (879)
|++..... ......+.. ...++. ....+..+.+||.+|
T Consensus 255 ~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m 334 (357)
T PHA03209 255 TIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKM 334 (357)
T ss_pred ccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHH
Confidence 33221100 000000000 000000 012345567899999
Q ss_pred cCCCCCCCCCHHHHhhcccccC
Q 002801 306 LHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 306 L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|..||.+|||+.|+|+||||+.
T Consensus 335 L~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 335 LTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HcCCcccCcCHHHHhcCchhcc
Confidence 9999999999999999999975
|
|
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=254.59 Aligned_cols=269 Identities=20% Similarity=0.309 Sum_probs=232.9
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..+++|+.||.+++||+++..+.+.++ .|.+.|..|+++. ..++|+|.|++|+.|.++.. |+..
T Consensus 80 s~~aSGs~DG~VkiWnlsqR~~~~~f~-----AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~---------p~~t 143 (433)
T KOG0268|consen 80 STVASGSCDGEVKIWNLSQRECIRTFK-----AHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGP---------PLHT 143 (433)
T ss_pred hhhhccccCceEEEEehhhhhhhheee-----cccCceeeEEecc--cceEEecCCcceeeeeccCC---------ccee
Confidence 456899999999999999988877765 7899999999997 67899999999999998751 4555
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
+...+.+..|.-+.. .+.++||+ -.|.|||.+...++..+..-...|.++.|+|.....|++|..|++|.|||++++
T Consensus 144 ilg~s~~~gIdh~~~-~~~FaTcG--e~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~ 220 (433)
T KOG0268|consen 144 ILGKSVYLGIDHHRK-NSVFATCG--EQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQA 220 (433)
T ss_pred eeccccccccccccc-cccccccC--ceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccC
Confidence 666777777776653 67888887 468999999889999998888899999999988889999999999999999999
Q ss_pred ceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEE
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLW 772 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lw 772 (879)
++++.+-.+..-+.|+|+|. +-.+++|+.|..++.||+|....|+.++.+|.++|.+|.|+ .|+.++|||.|.+|+||
T Consensus 221 ~Pl~KVi~~mRTN~IswnPe-afnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf 299 (433)
T KOG0268|consen 221 SPLKKVILTMRTNTICWNPE-AFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIF 299 (433)
T ss_pred CccceeeeeccccceecCcc-ccceeeccccccceehhhhhhcccchhhcccceeEEEeccCCCcchhccccccceEEEe
Confidence 99999888888899999995 88899999999999999999999999999999999999999 99999999999999999
Q ss_pred ecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCC
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMP 827 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~ 827 (879)
.++.+.++ .+.- .--...|.+|.||-|.+||+|||.|+.|++|.-...+.
T Consensus 300 ~~~~~~SR----diYh-tkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asek 349 (433)
T KOG0268|consen 300 PVNHGHSR----DIYH-TKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEK 349 (433)
T ss_pred ecCCCcch----hhhh-HhhhheeeEEEEeccccEEEecCCCcceeeeecchhhh
Confidence 99988653 1110 00123588999999999999999999999998765443
|
|
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-30 Score=282.46 Aligned_cols=201 Identities=18% Similarity=0.184 Sum_probs=158.1
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+.+ ....|+||||++|++|..++.+. ..+++.++..++.||+.||+|||++||+||||||+
T Consensus 50 l~~~~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~ 125 (321)
T cd05603 50 LKNLKHPFLVGLHY-SFQT--AEKLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPE 125 (321)
T ss_pred HHhCCCCCccceee-EEEc--CCEEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHH
Confidence 34567888888665 4433 34689999999999999988554 56899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||||+.++.+||+|||+++.......
T Consensus 126 NIll~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------------ 151 (321)
T cd05603 126 NILLDSQGHVVLTDFGLCKEGVEPEE------------------------------------------------------ 151 (321)
T ss_pred HeEECCCCCEEEccCCCCccCCCCCC------------------------------------------------------
Confidence 99999999999999999864211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||++.+..++.++|||||||+||||++ |
T Consensus 152 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p 195 (321)
T cd05603 152 ------------------------------------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPP 195 (321)
T ss_pred ------------------------------------ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCC
Confidence 0122478999999999998889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~~~~ 328 (879)
|....... ....+.... .+.....+..+.+++.+||+.||.+||++ .++++|+||...
T Consensus 196 f~~~~~~~-~~~~i~~~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 196 FYSRDVSQ-MYDNILHKP-LQLPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCHHH-HHHHHhcCC-CCCCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 76554332 223332222 12223456778899999999999999875 599999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-30 Score=283.81 Aligned_cols=202 Identities=18% Similarity=0.172 Sum_probs=156.9
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc-CcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-givHrDl 108 (879)
..+...+|++++..++ ++.+ ....|++|||++|++|.++++.. ..+++..+..++.||+.||.|||++ +|+||||
T Consensus 55 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dl 130 (331)
T cd06649 55 QVLHECNSPYIVGFYG-AFYS--DGEISICMEHMDGGSLDQVLKEA-KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDV 130 (331)
T ss_pred HHHHHCCCCCCCeEEE-EEEE--CCEEEEEeecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCC
Confidence 3455678888888777 4443 34689999999999999999654 4689999999999999999999986 6999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+|||++.++.+||+|||+++.....
T Consensus 131 kp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------------- 157 (331)
T cd06649 131 KPSNILVNSRGEIKLCDFGVSGQLIDS----------------------------------------------------- 157 (331)
T ss_pred ChhhEEEcCCCcEEEccCccccccccc-----------------------------------------------------
Confidence 999999999999999999998653110
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 158 ---------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg 198 (331)
T cd06649 158 ---------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG 198 (331)
T ss_pred ---------------------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhC
Confidence 0012368999999999998889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhc----------------------------------------------ccCCCch-hhccChhh
Q 002801 268 --PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQ-LLLKFPKE 298 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~----------------------------------------------~~~~~~~-~~~~~~~~ 298 (879)
||....... ....+. ....+.. ....++++
T Consensus 199 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 277 (331)
T cd06649 199 RYPIPPPDAKE-LEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDF 277 (331)
T ss_pred CCCCCCCCHHH-HHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHH
Confidence 775432211 111110 0000110 11245678
Q ss_pred HHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 299 ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 299 ~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
.+|+.+||..||++|||+.++++||||+..
T Consensus 278 ~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 278 QEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred HHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 999999999999999999999999999854
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-30 Score=282.79 Aligned_cols=201 Identities=17% Similarity=0.170 Sum_probs=158.6
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+.+ ....|++|||+.|++|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+
T Consensus 50 l~~~~h~~Iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~ 125 (325)
T cd05602 50 LKNVKHPFLVGLHF-SFQT--ADKLYFVLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPE 125 (325)
T ss_pred HHhCCCCCCCceeE-EEEc--CCeEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHH
Confidence 34567888887766 3332 34689999999999999999654 56889999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.......
T Consensus 126 Nili~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------------ 151 (325)
T cd05602 126 NILLDSQGHIVLTDFGLCKENIEHNG------------------------------------------------------ 151 (325)
T ss_pred HeEECCCCCEEEccCCCCcccccCCC------------------------------------------------------
Confidence 99999999999999999864211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....+||+.|+|||++.+..++.++|||||||++|||++ |
T Consensus 152 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p 195 (325)
T cd05602 152 ------------------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred ------------------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCC
Confidence 0122478999999999999899999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHH----HHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~----evl~hp~~~~~ 328 (879)
|........ +..+..... ......++.+.+++.+||+.||.+||++. ++++|+||...
T Consensus 196 f~~~~~~~~-~~~i~~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 196 FYSRNTAEM-YDNILNKPL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCHHHH-HHHHHhCCc-CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 765443332 222222211 12234667889999999999999999875 89999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-30 Score=289.80 Aligned_cols=250 Identities=13% Similarity=0.139 Sum_probs=161.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+.+ ....|+||||++|++|.+++... +.+++..++.++.||+.||+|||++||+||||||
T Consensus 54 il~~l~hp~iv~~~~-~~~~--~~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp 129 (377)
T cd05629 54 VLAESDSPWVVSLYY-SFQD--AQYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKP 129 (377)
T ss_pred HHHhCCCCCcceEEE-EEEc--CCeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCH
Confidence 345568888888776 4433 44689999999999999999654 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++.+......... .............. .. ........+.... ..
T Consensus 130 ~NIll~~~~~~kl~DfGla~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~------~~------ 191 (377)
T cd05629 130 DNILIDRGGHIKLSDFGLSTGFHKQHDSAYY-QKLLQGKSNKNRID----NR-NSVAVDSINLTMS------SK------ 191 (377)
T ss_pred HHEEECCCCCEEEeecccccccccccccccc-cccccccccccccc----cc-ccccccccccccc------ch------
Confidence 9999999999999999999754221100000 00000000000000 00 0000000000000 00
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.+..+.+ ..........+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 192 ---------------~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~ 246 (377)
T cd05629 192 ---------------DQIATWK----------KNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWP 246 (377)
T ss_pred ---------------hhhhhhh----------hcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCC
Confidence 0000000 000000123579999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhcCCCCCCC---CCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---pt~~evl~hp~~~~~ 328 (879)
||.............. .....|.....++.+.+||.+||. +|.+| +++.++++||||+..
T Consensus 247 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 247 PFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred CCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 7755443332222222 111122333456789999999998 66665 699999999999864
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-30 Score=286.26 Aligned_cols=205 Identities=17% Similarity=0.198 Sum_probs=161.9
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..++ ++.+ ....|+||||++|++|.+++.+. ..+++.+++.++.||+.||+|||++||+|||
T Consensus 48 E~~~l~~l~h~niv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~d 123 (318)
T cd05582 48 ERDILAEVNHPFIVKLHY-AFQT--EGKLYLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRD 123 (318)
T ss_pred HHHHHHhCCCCCcccEEE-EEEc--CCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCC
Confidence 333456678888888766 4443 34689999999999999999554 5689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+||+|||+++.......
T Consensus 124 lkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-------------------------------------------------- 153 (318)
T cd05582 124 LKPENILLDEEGHIKLTDFGLSKESIDHEK-------------------------------------------------- 153 (318)
T ss_pred CCHHHeEECCCCcEEEeeccCCcccCCCCC--------------------------------------------------
Confidence 999999999999999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 154 ----------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t 193 (318)
T cd05582 154 ----------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 193 (318)
T ss_pred ----------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeecc
Confidence 0122478999999999998889999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~ 328 (879)
||................. ..+...++.+.+||.+||+.||.+||+ +.+++.||||...
T Consensus 194 g~~p~~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 194 GSLPFQGKDRKETMTMILKAKL--GMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 7765443333222222221 122345678899999999999999999 7789999999864
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-30 Score=291.79 Aligned_cols=246 Identities=12% Similarity=0.133 Sum_probs=163.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. .+.+ ...+|+|||||+|++|.+++.+. +.+++..++.++.||+.||+|||++||+||||||
T Consensus 54 il~~l~h~~iv~~~~-~~~~--~~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp 129 (376)
T cd05598 54 ILAEADNEWVVKLYY-SFQD--KDNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKP 129 (376)
T ss_pred HHHhCCCCCcceEEE-EEEc--CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCH
Confidence 445567888887776 4433 44789999999999999999654 5689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+|..+.......-+... .. .. ......... .. .....
T Consensus 130 ~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~----~~---~~------------~~~~~~~~~----~~---~~~~~ 183 (376)
T cd05598 130 DNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKG----DH---HR------------QDSMEPSEE----WS---EIDRC 183 (376)
T ss_pred HHEEECCCCCEEEEeCCCCccccccccccccccc----cc---cc------------ccccccccc----cc---ccccc
Confidence 9999999999999999998654211000000000 00 00 000000000 00 00000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
. . ...................+||+.|||||++.+..++.++|||||||+||||++
T Consensus 184 ~--------------~-------~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~ 242 (376)
T cd05598 184 R--------------L-------KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQP 242 (376)
T ss_pred c--------------c-------cchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCC
Confidence 0 0 000000000000011134689999999999999999999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~ 328 (879)
||............... ....+.....++.+.++|.+|+ .+|.+|+ ++.++++||||...
T Consensus 243 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 243 PFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred CCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 88655443333222221 1122333456788899999976 5999999 99999999999864
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-30 Score=277.07 Aligned_cols=204 Identities=17% Similarity=0.138 Sum_probs=161.9
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|||.+.+-+ |+-. +...+||||||-| |-.++|.-...++.+.++..|..+.+.||+||||.+.||||||..
T Consensus 80 L~~l~HPntieYkg--CyLr-e~TaWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAG 155 (948)
T KOG0577|consen 80 LRQLRHPNTIEYKG--CYLR-EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAG 155 (948)
T ss_pred HHhccCCCcccccc--eeec-cchHHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhcccc
Confidence 45678888887555 5432 3357999999954 666766544557999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||||+..|.||++|||.|....+
T Consensus 156 NILLse~g~VKLaDFGSAsi~~P--------------------------------------------------------- 178 (948)
T KOG0577|consen 156 NILLSEPGLVKLADFGSASIMAP--------------------------------------------------------- 178 (948)
T ss_pred ceEecCCCeeeeccccchhhcCc---------------------------------------------------------
Confidence 99999999999999999966311
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC---CCCCccCcchhHHHHHHHhhc-
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvil~ell~- 267 (879)
...++|||+|||||++.. +.|+-++||||||+++.||.-
T Consensus 179 -------------------------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAER 221 (948)
T KOG0577|consen 179 -------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 221 (948)
T ss_pred -------------------------------------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhc
Confidence 134699999999999863 559999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
|++..+.....+.+-......-.....+..+..|+..||++-|.+|||.+++|.|+|+...+.+..
T Consensus 222 kPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp~tv 289 (948)
T KOG0577|consen 222 KPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERPPTV 289 (948)
T ss_pred CCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCCchH
Confidence 777766555554443332222222344567889999999999999999999999999987655443
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-28 Score=255.36 Aligned_cols=280 Identities=23% Similarity=0.304 Sum_probs=233.8
Q ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEE
Q 002801 566 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~-~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~v 644 (879)
...+.|.+++|+|... -+|+.+. -++.||+..+....... ...+..+.+++|.. +|.++|+|+..|.|+|
T Consensus 24 ke~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~k~~-------srFk~~v~s~~fR~-DG~LlaaGD~sG~V~v 94 (487)
T KOG0310|consen 24 KEHNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVRKTF-------SRFKDVVYSVDFRS-DGRLLAAGDESGHVKV 94 (487)
T ss_pred cccCcceeEecCCCCCCceEEecc-cEEEEEecchhhhhhhH-------HhhccceeEEEeec-CCeEEEccCCcCcEEE
Confidence 3457899999999433 3444433 48999998764322211 12456789999987 5999999999999999
Q ss_pred EEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEeC
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 645 wd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~ 723 (879)
||+.+...++.+.+|+.+|..+.|+|.+..+|++|++|+.+++||+.+...+..+. +..-|.|.+|+|..++.+++|+.
T Consensus 95 fD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsY 174 (487)
T KOG0310|consen 95 FDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSY 174 (487)
T ss_pred eccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCC
Confidence 99777667788899999999999999889999999999999999999988655555 45669999999998889999999
Q ss_pred CCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEe
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802 (879)
Q Consensus 724 d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 802 (879)
||.|++||+|.....+..+ .|..+|..+.|. .|..++|++. +.+++||+-++. +.+..+..|...|+|+.+.
T Consensus 175 Dg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~-----qll~~~~~H~KtVTcL~l~ 247 (487)
T KOG0310|consen 175 DGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGG-NSVKVWDLTTGG-----QLLTSMFNHNKTVTCLRLA 247 (487)
T ss_pred CceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCC-CeEEEEEecCCc-----eehhhhhcccceEEEEEee
Confidence 9999999999986456666 699999999998 7788988875 679999999773 5556666699999999999
Q ss_pred cCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
.++..|++||-|+.|++|++..-+.+.+++| .++|.+++.+|++. .++.|.+||.+-+-
T Consensus 248 s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~--------------~~pvLsiavs~dd~-t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 248 SDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY--------------PGPVLSIAVSPDDQ-TVVIGMSNGLVSIR 306 (487)
T ss_pred cCCceEeecccccceEEEEccceEEEEeeec--------------ccceeeEEecCCCc-eEEEecccceeeee
Confidence 9999999999999999999888777777765 35699999999999 99999999987654
|
|
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-30 Score=286.38 Aligned_cols=238 Identities=14% Similarity=0.183 Sum_probs=161.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+. .....|+||||++|++|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+
T Consensus 55 l~~l~~~~iv~~~~-~~~--~~~~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~ 130 (360)
T cd05627 55 LVEADGAWVVKMFY-SFQ--DKRNLYLIMEFLPGGDMMTLLMKK-DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPD 130 (360)
T ss_pred HHhCCCCCEeeEEE-EEE--cCCEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHH
Confidence 44567888877766 333 344689999999999999999654 56899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++.........-. .. .....+ .++.+... ..
T Consensus 131 NIli~~~~~vkL~DfG~~~~~~~~~~~~~~-~~-~~~~~~-----------------~~~~~~~~-----------~~-- 178 (360)
T cd05627 131 NLLLDAKGHVKLSDFGLCTGLKKAHRTEFY-RN-LTHNPP-----------------SDFSFQNM-----------NS-- 178 (360)
T ss_pred HEEECCCCCEEEeeccCCcccccccccccc-cc-cccCCc-----------------cccccccc-----------cc--
Confidence 999999999999999999765322111000 00 000000 00000000 00
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
....+ . ............+||+.|+|||++.+..++.++|||||||+||||++ |
T Consensus 179 --------------------~~~~~--~-~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 179 --------------------KRKAE--T-WKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred --------------------ccccc--c-ccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 00000 0 00000001123589999999999999999999999999999999999 7
Q ss_pred CCCChhhHhHHhhhc--ccCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCCc
Q 002801 269 FSTGEEKTRTMSSLR--HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPR 329 (879)
Q Consensus 269 f~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~~ 329 (879)
|.............. .....|.....++.+.+||.+|+. ||.+|+ ++.++++||||....
T Consensus 236 f~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~ 300 (360)
T cd05627 236 FCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVD 300 (360)
T ss_pred CCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCC
Confidence 765544333322222 111112223356788999999874 999998 489999999999754
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-30 Score=272.39 Aligned_cols=204 Identities=17% Similarity=0.156 Sum_probs=161.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ ++.++ ..+|++|||++|++|.+++.+. ..+++..++.++.||+.||.|||+.||+||||||
T Consensus 57 ~l~~l~~~~i~~~~~-~~~~~--~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p 132 (263)
T cd06625 57 LLKNLQHERIVQYYG-CLRDD--ETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKG 132 (263)
T ss_pred HHHhCCCCCeeeeEE-EEccC--CeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 455678888888777 44433 3789999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||+++.........
T Consensus 133 ~nilv~~~~~~~l~dfg~~~~~~~~~~~~--------------------------------------------------- 161 (263)
T cd06625 133 ANILRDSAGNVKLGDFGASKRLQTICSSG--------------------------------------------------- 161 (263)
T ss_pred HHEEEcCCCCEEEeecccceecccccccc---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 205 (263)
T cd06625 162 ------------------------------------TGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKP 205 (263)
T ss_pred ------------------------------------ccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCC
Confidence 00012367889999999999889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..................++.....+..+.+++.+||..+|.+|||+.++++||||
T Consensus 206 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 206 PWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred CccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 7755444433333333333334444566788999999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-30 Score=281.94 Aligned_cols=205 Identities=16% Similarity=0.200 Sum_probs=157.5
Q ss_pred cccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
....|++++..+. .+.+ ....|+||||+.||+|.+++.+....+++..++.++.||+.||+|||++||+||||||+|
T Consensus 56 ~~~~~~~i~~~~~-~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~N 132 (332)
T cd05623 56 VNGDNQWITTLHY-AFQD--ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDN 132 (332)
T ss_pred hhCCCCCEeeEEE-EEec--CCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH
Confidence 3456777666555 3433 346899999999999999997655678999999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
||++.++.+||+|||+++........
T Consensus 133 ili~~~~~~kL~DfG~a~~~~~~~~~------------------------------------------------------ 158 (332)
T cd05623 133 ILMDMNGHIRLADFGSCLKLMEDGTV------------------------------------------------------ 158 (332)
T ss_pred EEECCCCCEEEeecchheecccCCcc------------------------------------------------------
Confidence 99999999999999998653111000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHHhhc
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~ell~ 267 (879)
.....+||+.|+|||++.+ ..++.++|||||||+||||++
T Consensus 159 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~ 203 (332)
T cd05623 159 -----------------------------------QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLY 203 (332)
T ss_pred -----------------------------------eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhc
Confidence 0112478999999999862 458999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCCc
Q 002801 268 ---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~~ 329 (879)
||................ ..|......++.+.+|+.+||..+|.+ |+++.++++||||....
T Consensus 204 g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~ 273 (332)
T cd05623 204 GETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID 273 (332)
T ss_pred CCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence 886554433333333222 233444456788999999999765544 68999999999998753
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-30 Score=285.42 Aligned_cols=204 Identities=20% Similarity=0.211 Sum_probs=152.2
Q ss_pred ceeecccccccCCCCCCccccc----ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 29 GVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
...+...+|++++..++ ++.. +....+|+||||+++ +|.+++.. .+++..+..++.||+.||+|||++||+
T Consensus 74 ~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~iv 148 (364)
T cd07875 74 LVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGII 148 (364)
T ss_pred HHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCee
Confidence 33455667888887766 4332 122457999999965 78787743 478999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+|||++.++.+||+|||+++..+...
T Consensus 149 H~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~------------------------------------------------ 180 (364)
T cd07875 149 HRDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------------ 180 (364)
T ss_pred cCCCCHHHEEECCCCcEEEEeCCCccccCCCC------------------------------------------------
Confidence 99999999999999999999999996532110
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 264 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~e 264 (879)
......||+.|+|||++.+..++.++|||||||+|||
T Consensus 181 -------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e 217 (364)
T cd07875 181 -------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGE 217 (364)
T ss_pred -------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHH
Confidence 0012468999999999999899999999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCC--------------------C--------------------chhhccChhhHHH
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVL--------------------P--------------------PQLLLKFPKEASF 301 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~--------------------~--------------------~~~~~~~~~~~~l 301 (879)
|++ ||............+..... + .........+.+|
T Consensus 218 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 297 (364)
T cd07875 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297 (364)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHH
Confidence 999 77544332221111110000 0 0000123457899
Q ss_pred HHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 302 CLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 302 i~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
|.+||+.||.+|||+.++|+||||...
T Consensus 298 l~~mL~~dP~~R~t~~e~L~hp~~~~~ 324 (364)
T cd07875 298 LSKMLVIDASKRISVDEALQHPYINVW 324 (364)
T ss_pred HHHhcCcCcccCCCHHHHhcCcccccc
Confidence 999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=231.56 Aligned_cols=271 Identities=15% Similarity=0.202 Sum_probs=220.5
Q ss_pred ceecccccCceEEEeecC---cEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccce
Q 002801 535 GWINPFLEGLCKYLSFSK---LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~---~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~ 611 (879)
-++++..|..+++|+... ..++..+.. +|...|++++|+|.|++||+|+.|.++.||.-... ......
T Consensus 29 ilAscg~Dk~vriw~~~~~~s~~ck~vld~----~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~-----efecv~ 99 (312)
T KOG0645|consen 29 ILASCGTDKAVRIWSTSSGDSWTCKTVLDD----GHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDG-----EFECVA 99 (312)
T ss_pred EEEeecCCceEEEEecCCCCcEEEEEeccc----cchheeeeeeecCCCcEEEEeeccceEEEeecCCC-----ceeEEe
Confidence 368899999999999884 444444442 89999999999999999999999999999975432 222223
Q ss_pred EEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCC---eEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 002801 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 612 ~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~---~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw 688 (879)
..-+|...|.|++|++. +++||+++.|..|-||.+..+ .+...+++|+.-|-.+.|+| ...+|+|+|.|.+|++|
T Consensus 100 ~lEGHEnEVK~Vaws~s-G~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP-t~dlL~S~SYDnTIk~~ 177 (312)
T KOG0645|consen 100 TLEGHENEVKCVAWSAS-GNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP-TEDLLFSCSYDNTIKVY 177 (312)
T ss_pred eeeccccceeEEEEcCC-CCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC-CcceeEEeccCCeEEEE
Confidence 33478999999999985 999999999999999998643 57788899999999999999 88999999999999999
Q ss_pred eCC---CCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEE
Q 002801 689 SIN---QGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSAS 764 (879)
Q Consensus 689 d~~---~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s 764 (879)
+-. ...+++++..+ ..|.+++|+|. |..|++++.|++|+||-....- -..|+.+++.+.|. ...|+|++
T Consensus 178 ~~~~dddW~c~~tl~g~~~TVW~~~F~~~-G~rl~s~sdD~tv~Iw~~~~~~-----~~~~sr~~Y~v~W~-~~~IaS~g 250 (312)
T KOG0645|consen 178 RDEDDDDWECVQTLDGHENTVWSLAFDNI-GSRLVSCSDDGTVSIWRLYTDL-----SGMHSRALYDVPWD-NGVIASGG 250 (312)
T ss_pred eecCCCCeeEEEEecCccceEEEEEecCC-CceEEEecCCcceEeeeeccCc-----chhcccceEeeeec-ccceEecc
Confidence 876 23678888865 46999999999 7899999999999999876321 12477899999997 67899999
Q ss_pred cCCcEEEEecCCCc-ccccCCceEEEeCCCCcEEEEEEecC-CCEEEEEeCCCcEEEEecC
Q 002801 765 TDNTLKLWDLSMCT-SRVIDTPLHSFTGHTNVKNFVGLSVW-DGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 765 ~D~~i~lwd~~~~~-~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~lasgs~Dg~v~vw~~~ 823 (879)
.|+.|++|.-.... ..........-..|...||+|.|+|. ...|++||.||.|++|.+.
T Consensus 251 gD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 251 GDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred CCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 99999999876431 11111122234568889999999995 6699999999999999764
|
|
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-30 Score=258.73 Aligned_cols=238 Identities=15% Similarity=0.204 Sum_probs=172.1
Q ss_pred cccccccccccCCCCCccccc--ccCceeec-ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCCh
Q 002801 5 LLRGERFGVRGDDSNDFELRK--HSDGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81 (879)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~r~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~ 81 (879)
+..|...+|+-.+....+-|. .+++..+. +..|+|++-... +++|+. ..|||||-+.||+|..+|.+. ..+++
T Consensus 100 i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLie-fFEdd~--~FYLVfEKm~GGplLshI~~~-~~F~E 175 (463)
T KOG0607|consen 100 IQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIE-FFEDDT--RFYLVFEKMRGGPLLSHIQKR-KHFNE 175 (463)
T ss_pred eccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHH-Hhcccc--eEEEEEecccCchHHHHHHHh-hhccH
Confidence 345566666554443333222 23333333 478888877776 555544 579999999999999999655 57899
Q ss_pred hHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCC---eeeeecccccCCCCCCcccccccccccccCCCCCCcch
Q 002801 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (879)
Q Consensus 82 ~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~---vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (879)
.++..+.++|+.||+|||.+||+||||||+|||-..-++ ||||||.+.......
T Consensus 176 ~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~----------------------- 232 (463)
T KOG0607|consen 176 REASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN----------------------- 232 (463)
T ss_pred HHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccC-----------------------
Confidence 999999999999999999999999999999999976654 799999987542111
Q ss_pred hhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccce
Q 002801 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (879)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (879)
.+-+++..| .....+|+..|
T Consensus 233 ----------~~~spastP--------------------------------------------------~L~tPvGSAEf 252 (463)
T KOG0607|consen 233 ----------NDCSPASTP--------------------------------------------------ELLTPVGSAEF 252 (463)
T ss_pred ----------CCCCCCCCc--------------------------------------------------cccCcccchhh
Confidence 000000000 12345899999
Q ss_pred ecccccc---C--CCCCccCcchhHHHHHHHhhc---CCCCCh---------h-----hHhHHhhhccc---CCCchhhc
Q 002801 239 ASPEELA---G--APVSCASDIYRLGVLLFELFC---PFSTGE---------E-----KTRTMSSLRHR---VLPPQLLL 293 (879)
Q Consensus 239 ~aPE~~~---~--~~~~~~sDIwSlGvil~ell~---pf~~~~---------~-----~~~~~~~~~~~---~~~~~~~~ 293 (879)
||||+.. + ..|+.++|.||||||||.||+ ||.+.- + .......+..+ +....|..
T Consensus 253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWah 332 (463)
T KOG0607|consen 253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAH 332 (463)
T ss_pred cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHH
Confidence 9999874 2 238999999999999999999 664321 1 11122333333 23456777
Q ss_pred cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 294 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 294 ~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
.+.+++++|..+|..||.+|.++.++++|||++...
T Consensus 333 IS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 333 ISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred hhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 888999999999999999999999999999998654
|
|
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-30 Score=279.39 Aligned_cols=201 Identities=18% Similarity=0.221 Sum_probs=154.9
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
...|++++..+.+.+.+ ....|+||||++|++|.+++.+. ..+++.+++.|+.||+.||+|||++||+||||||+||
T Consensus 56 ~~~~~~~i~~~~~~~~~--~~~~~lv~Ey~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Ni 132 (323)
T cd05615 56 LQDKPPFLTQLHSCFQT--VDRLYFVMEYVNGGDLMYHIQQV-GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNV 132 (323)
T ss_pred hccCCCchhheeeEEec--CCEEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHe
Confidence 33444444433323332 34689999999999999999654 4689999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
|++.++.+||+|||+++.......
T Consensus 133 ll~~~~~ikL~Dfg~~~~~~~~~~-------------------------------------------------------- 156 (323)
T cd05615 133 MLDSEGHIKIADFGMCKEHMVDGV-------------------------------------------------------- 156 (323)
T ss_pred EECCCCCEEEeccccccccCCCCc--------------------------------------------------------
Confidence 999999999999999864211100
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......||+.|+|||++.+..++.++|||||||+||||++ ||.
T Consensus 157 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~ 202 (323)
T cd05615 157 ----------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 202 (323)
T ss_pred ----------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCC
Confidence 0012468999999999998889999999999999999999 776
Q ss_pred CChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCc
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~ 329 (879)
...........+..... .+...++.+.+++.+||.++|.+|++ ..++++||||....
T Consensus 203 ~~~~~~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~ 264 (323)
T cd05615 203 GEDEDELFQSIMEHNVS--YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRID 264 (323)
T ss_pred CCCHHHHHHHHHhCCCC--CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCC
Confidence 55443333333332221 22345678899999999999999997 47899999998653
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-30 Score=256.42 Aligned_cols=188 Identities=18% Similarity=0.202 Sum_probs=159.2
Q ss_pred ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeeccccc
Q 002801 51 EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCS 130 (879)
Q Consensus 51 ~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~ 130 (879)
..+..+++||||+.||.|+-+|.+. +.+++..++.+-.+|+.||.|||+++||.||||.+|.||+.+|++||+|||+|+
T Consensus 238 Qt~drlCFVMeyanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCK 316 (516)
T KOG0690|consen 238 QTQDRLCFVMEYANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCK 316 (516)
T ss_pred ccCceEEEEEEEccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccch
Confidence 4566789999999999999999654 679999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccc
Q 002801 131 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 210 (879)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (879)
.--..
T Consensus 317 E~I~~--------------------------------------------------------------------------- 321 (516)
T KOG0690|consen 317 EEIKY--------------------------------------------------------------------------- 321 (516)
T ss_pred hcccc---------------------------------------------------------------------------
Confidence 62110
Q ss_pred cccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCC
Q 002801 211 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL 287 (879)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~ 287 (879)
.-.+..+||||.|.|||++....|+.++|+|.+||++|||+| ||+..........++.....
T Consensus 322 ---------------g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~k 386 (516)
T KOG0690|consen 322 ---------------GDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLK 386 (516)
T ss_pred ---------------cceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhcc
Confidence 112355799999999999999999999999999999999999 99876655544444554444
Q ss_pred CchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCcCc
Q 002801 288 PPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRDS 331 (879)
Q Consensus 288 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~~~ 331 (879)
.|. ..+++++.|+..+|.+||.+|.. +.||.+|+||..+...
T Consensus 387 FPr--~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~ 433 (516)
T KOG0690|consen 387 FPR--TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWE 433 (516)
T ss_pred CCc--cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence 333 45689999999999999999954 7899999999987654
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-30 Score=291.25 Aligned_cols=205 Identities=16% Similarity=0.192 Sum_probs=154.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|+|++..++ ++.. ....|++||++. ++|.+++......+++.+++.|+.||+.||.|||++|||||||||
T Consensus 213 iL~~L~HpnIv~l~~-~~~~--~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP 288 (461)
T PHA03211 213 LLRRLSHPAVLALLD-VRVV--GGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKT 288 (461)
T ss_pred HHHHCCCCCCCcEEE-EEEE--CCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCH
Confidence 455678889888777 4443 345799999994 689998866556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||||+.++.+||+|||+++........
T Consensus 289 ~NILl~~~~~vkL~DFGla~~~~~~~~~---------------------------------------------------- 316 (461)
T PHA03211 289 ENVLVNGPEDICLGDFGAACFARGSWST---------------------------------------------------- 316 (461)
T ss_pred HHEEECCCCCEEEcccCCceeccccccc----------------------------------------------------
Confidence 9999999999999999998653111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......+||+.|+|||++.+..++.++|||||||+||||++
T Consensus 317 ------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~ 360 (461)
T PHA03211 317 ------------------------------------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTA 360 (461)
T ss_pred ------------------------------------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCC
Confidence 00012478999999999999999999999999999999986
Q ss_pred CCCCChh-------hHhHHhhhccc-----CCC-------------------------chh---hccChhhHHHHHHhcC
Q 002801 268 PFSTGEE-------KTRTMSSLRHR-----VLP-------------------------PQL---LLKFPKEASFCLWLLH 307 (879)
Q Consensus 268 pf~~~~~-------~~~~~~~~~~~-----~~~-------------------------~~~---~~~~~~~~~li~~~L~ 307 (879)
|++.... .......+... .++ +.+ ....+.+.+||.+||.
T Consensus 361 ~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 440 (461)
T PHA03211 361 SLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALT 440 (461)
T ss_pred CcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcc
Confidence 3433211 11111111110 000 001 1234567899999999
Q ss_pred CCCCCCCCHHHHhhcccccC
Q 002801 308 PEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 308 ~dP~~Rpt~~evl~hp~~~~ 327 (879)
.||.+|||+.|+|+||||+.
T Consensus 441 ~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 441 FDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred cChhhCcCHHHHhhCcccCC
Confidence 99999999999999999974
|
|
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.6e-30 Score=294.37 Aligned_cols=179 Identities=16% Similarity=0.278 Sum_probs=137.3
Q ss_pred cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCCCcceeeccCC-------------
Q 002801 54 IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFN------------- 119 (879)
Q Consensus 54 ~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlKP~NIll~~~~------------- 119 (879)
...||+||++ |++|.+++.+. +.+++.+++.|+.||+.||+|||+ .|||||||||+|||++..+
T Consensus 205 ~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 205 GHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred ceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 4578899888 78899998654 578999999999999999999998 5999999999999998665
Q ss_pred ---CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcc
Q 002801 120 ---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 196 (879)
Q Consensus 120 ---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (879)
.+||+|||.+.....
T Consensus 283 ~~~~vkl~DfG~~~~~~~-------------------------------------------------------------- 300 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERH-------------------------------------------------------------- 300 (467)
T ss_pred CCceEEECCCCccccCcc--------------------------------------------------------------
Confidence 489999997743100
Q ss_pred eeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh
Q 002801 197 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 273 (879)
Q Consensus 197 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~ 273 (879)
..+..+||+.|||||++.+..|+.++|||||||+||||++ ||....
T Consensus 301 -------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~ 349 (467)
T PTZ00284 301 -------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHD 349 (467)
T ss_pred -------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0123588999999999999999999999999999999999 775433
Q ss_pred hhHhH--HhhhcccCCCchh---------------------------------------hccChhhHHHHHHhcCCCCCC
Q 002801 274 EKTRT--MSSLRHRVLPPQL---------------------------------------LLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 274 ~~~~~--~~~~~~~~~~~~~---------------------------------------~~~~~~~~~li~~~L~~dP~~ 312 (879)
..... +..... .+|..+ ....+.+.+||.+||++||.+
T Consensus 350 ~~~~~~~i~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~ 428 (467)
T PTZ00284 350 NLEHLHLMEKTLG-RLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQK 428 (467)
T ss_pred hHHHHHHHHHHcC-CCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhh
Confidence 22111 111000 000000 011245679999999999999
Q ss_pred CCCHHHHhhcccccCC
Q 002801 313 RPKMGELLQSEFLNEP 328 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~ 328 (879)
|||++|+|+||||...
T Consensus 429 R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 429 RLNARQMTTHPYVLKY 444 (467)
T ss_pred CCCHHHHhcCcccccc
Confidence 9999999999999864
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.4e-30 Score=284.35 Aligned_cols=205 Identities=19% Similarity=0.209 Sum_probs=151.4
Q ss_pred CceeecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+...+...+|++++..++ ++.... ....|++|||+++ +|.+++.. .+++..+..++.||+.||+|||++||
T Consensus 70 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~i 144 (359)
T cd07876 70 ELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGI 144 (359)
T ss_pred HHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 334455667888887776 443221 2357999999965 57776633 47899999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+||||||+|||++.++.+||+|||+++......
T Consensus 145 vHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------------------------------------- 177 (359)
T cd07876 145 IHRDLKPSNIVVKSDCTLKILDFGLARTACTNF----------------------------------------------- 177 (359)
T ss_pred ccCCCCHHHEEECCCCCEEEecCCCccccccCc-----------------------------------------------
Confidence 999999999999999999999999986531110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 178 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 213 (359)
T cd07876 178 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 213 (359)
T ss_pred --------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHH
Confidence 002247799999999999989999999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhc----------------------c-cCCC--------c---------hhhccChhhHH
Q 002801 264 ELFC---PFSTGEEKTRTMSSLR----------------------H-RVLP--------P---------QLLLKFPKEAS 300 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~----------------------~-~~~~--------~---------~~~~~~~~~~~ 300 (879)
||++ ||............+. . ...+ + ......+.+.+
T Consensus 214 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (359)
T cd07876 214 ELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARD 293 (359)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHH
Confidence 9999 7754432111100000 0 0000 0 00112356789
Q ss_pred HHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 301 FCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 301 li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||.+||..||++|||+.|+|+||||...
T Consensus 294 li~~mL~~dP~~R~t~~e~l~hp~~~~~ 321 (359)
T cd07876 294 LLSKMLVIDPDKRISVDEALRHPYITVW 321 (359)
T ss_pred HHHHHhccCcccCCCHHHHhcCchhhhh
Confidence 9999999999999999999999999753
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=272.01 Aligned_cols=246 Identities=22% Similarity=0.377 Sum_probs=218.1
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i 696 (879)
.+.+..++|+|. ..+|+++-..|.|++||.+-+.++..|.+|.++|..|+|+| +..+|+||++|.+|++|+..+.+++
T Consensus 9 SsRvKglsFHP~-rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~-~qplFVSGGDDykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 9 SSRVKGLSFHPK-RPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHP-TQPLFVSGGDDYKIKVWNYKTRRCL 86 (1202)
T ss_pred cccccceecCCC-CCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecC-CCCeEEecCCccEEEEEecccceeh
Confidence 457899999996 89999999999999999999999999999999999999999 8889999999999999999999999
Q ss_pred EEEecCC-ceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEec
Q 002801 697 GTIKTKA-NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDL 774 (879)
Q Consensus 697 ~~~~~~~-~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~ 774 (879)
.++..|- -|..+.||+. -.+|+++|.|.+|+||+..+.+. ++.+.||...|.|..|+ ..+.++|+|-|.+||+||+
T Consensus 87 ftL~GHlDYVRt~~FHhe-yPWIlSASDDQTIrIWNwqsr~~-iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDi 164 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHE-YPWILSASDDQTIRIWNWQSRKC-IAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDI 164 (1202)
T ss_pred hhhccccceeEEeeccCC-CceEEEccCCCeEEEEeccCCce-EEEEecCceEEEeeccCCccceEEEecccceEEEEee
Confidence 9888664 5999999998 67999999999999999998884 99999999999999999 7999999999999999998
Q ss_pred CCCccc-------------------cc---C-CceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceec
Q 002801 775 SMCTSR-------------------VI---D-TPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 775 ~~~~~~-------------------~~---~-~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
...... .. + ...+.+.||...||.++|+|.-..|++|+.|+.|++|.+...+.
T Consensus 165 sGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmnetKa---- 240 (1202)
T KOG0292|consen 165 SGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKA---- 240 (1202)
T ss_pred cchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEeccccc----
Confidence 653211 00 1 12346679999999999999999999999999999999875431
Q ss_pred ccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 832 NFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 832 ~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
+.-....+|...|+++-|+|... ++++.|.|++|+||||
T Consensus 241 -------WEvDtcrgH~nnVssvlfhp~q~-lIlSnsEDksirVwDm 279 (1202)
T KOG0292|consen 241 -------WEVDTCRGHYNNVSSVLFHPHQD-LILSNSEDKSIRVWDM 279 (1202)
T ss_pred -------eeehhhhcccCCcceEEecCccc-eeEecCCCccEEEEec
Confidence 22234478999999999999999 9999999999999997
|
|
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-30 Score=283.77 Aligned_cols=201 Identities=21% Similarity=0.189 Sum_probs=153.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+.+++|.... .+++..+..|++||+.||+|||++||+||||||
T Consensus 125 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp 196 (353)
T PLN00034 125 ILRDVNHPNVVKCHD-MFDH--NGEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIVHRDIKP 196 (353)
T ss_pred HHHhCCCCCcceeee-Eecc--CCeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCH
Confidence 455667888888776 4433 44689999999999987543 356788899999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 197 ~NIll~~~~~~kL~DfG~~~~~~~~~~----------------------------------------------------- 223 (353)
T PLN00034 197 SNLLINSAKNVKIADFGVSRILAQTMD----------------------------------------------------- 223 (353)
T ss_pred HHEEEcCCCCEEEcccccceecccccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~el 265 (879)
.....+||..|+|||++.. ...+.++|||||||+||||
T Consensus 224 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el 266 (353)
T PLN00034 224 -------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEF 266 (353)
T ss_pred -------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHH
Confidence 0012478999999998843 2346799999999999999
Q ss_pred hc---CCCCCh--hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 266 FC---PFSTGE--EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 266 l~---pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
++ ||.... .....+..+.....+......++.+.+||.+||..||++||++.|+++||||....
T Consensus 267 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 267 YLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred HhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 99 775322 11222222222233333445677899999999999999999999999999998754
|
|
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=279.34 Aligned_cols=204 Identities=16% Similarity=0.224 Sum_probs=156.2
Q ss_pred cccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
...+|++++..+. ++.+ ....|+||||+.|++|.+++.+....+++..++.++.||+.||+|||++||+||||||+|
T Consensus 56 ~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N 132 (331)
T cd05597 56 VNGDRRWITNLHY-AFQD--ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDN 132 (331)
T ss_pred HhCCCCCCCceEE-EEec--CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHH
Confidence 3456777776665 4433 346899999999999999997655678999999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
||++.++.+||+|||++.........
T Consensus 133 ill~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------------------ 158 (331)
T cd05597 133 VLLDKNGHIRLADFGSCLRLLADGTV------------------------------------------------------ 158 (331)
T ss_pred EEECCCCCEEEEECCceeecCCCCCc------------------------------------------------------
Confidence 99999999999999998653211000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHHhhc
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~ell~ 267 (879)
.....+||+.|+|||++.+ ..++.++|||||||+||||++
T Consensus 159 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 203 (331)
T cd05597 159 -----------------------------------QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY 203 (331)
T ss_pred -----------------------------------cccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh
Confidence 0012478999999999973 347889999999999999999
Q ss_pred ---CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
||............+... ..++.....++.+.+|+.+||..++.+ ||++.++++||||...
T Consensus 204 g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 204 GETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 886554333322222221 233334446788999999988764443 7899999999999874
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-30 Score=284.31 Aligned_cols=225 Identities=19% Similarity=0.233 Sum_probs=166.4
Q ss_pred ccccccccccCCCCCcccccccCcee-ecccc------cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-C
Q 002801 6 LRGERFGVRGDDSNDFELRKHSDGVE-LTHGD------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-R 77 (879)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~ 77 (879)
..|+.|+++=-...-+.+|.+...+. |.+.+ -.++|..++ . .-...+++||.|++ +.+|.++|+.+. .
T Consensus 209 ~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d-~--F~fr~HlciVfELL-~~NLYellK~n~f~ 284 (586)
T KOG0667|consen 209 KTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLD-Y--FYFRNHLCIVFELL-STNLYELLKNNKFR 284 (586)
T ss_pred CCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeee-c--cccccceeeeehhh-hhhHHHHHHhcCCC
Confidence 45677777776666666666633333 22222 233455555 2 23466889999998 789999996543 4
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccC--CCeeeeecccccCCCCCCcccccccccccccCCCCCC
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (879)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (879)
.|+...++.|++||+.||.+||+.||||+|||||||||..- ..||+||||++.....
T Consensus 285 Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q--------------------- 343 (586)
T KOG0667|consen 285 GLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ--------------------- 343 (586)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCC---------------------
Confidence 68999999999999999999999999999999999999643 4799999999865211
Q ss_pred cchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccc
Q 002801 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (879)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt 235 (879)
.....+.+
T Consensus 344 ------------------------------------------------------------------------~vytYiQS 351 (586)
T KOG0667|consen 344 ------------------------------------------------------------------------RVYTYIQS 351 (586)
T ss_pred ------------------------------------------------------------------------cceeeeec
Confidence 11235778
Q ss_pred cceeccccccCCCCCccCcchhHHHHHHHhhc--CCCCChhhHhHHhhhccc----------------------------
Q 002801 236 NWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHR---------------------------- 285 (879)
Q Consensus 236 ~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~~~~~---------------------------- 285 (879)
..|+|||+|.|.+|+.+.||||||||+.||++ |+++++.....+..+.+-
T Consensus 352 RfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~ 431 (586)
T KOG0667|consen 352 RFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRL 431 (586)
T ss_pred cccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceee
Confidence 99999999999999999999999999999999 877776555444322110
Q ss_pred --------------------------CCCchh-------h-ccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 286 --------------------------VLPPQL-------L-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 286 --------------------------~~~~~~-------~-~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
..|+.. . .....+.+|+.+||..||.+|+|+.|+|+||||..
T Consensus 432 ~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 432 CVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred eeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence 001000 0 00123579999999999999999999999999984
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=283.98 Aligned_cols=203 Identities=15% Similarity=0.171 Sum_probs=156.1
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|+||||++|++|.++++.. .+++..++.++.||+.||.|||++||+||||||+
T Consensus 97 ~~~~~hp~iv~~~~-~~~~--~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~ 171 (371)
T cd05622 97 MAFANSPWVVQLFY-AFQD--DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPD 171 (371)
T ss_pred HHhCCCCCCCeEEE-EEEc--CCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHH
Confidence 34467888888776 4432 44689999999999999999653 5899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++++||+|||+++........
T Consensus 172 NIll~~~~~ikL~DfG~a~~~~~~~~~----------------------------------------------------- 198 (371)
T cd05622 172 NMLLDKSGHLKLADFGTCMKMNKEGMV----------------------------------------------------- 198 (371)
T ss_pred HEEECCCCCEEEEeCCceeEcCcCCcc-----------------------------------------------------
Confidence 999999999999999998653211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----CCccCcchhHHHHHHHhhc
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvil~ell~ 267 (879)
.....+||+.|+|||++.+.. ++.++|||||||+||||++
T Consensus 199 ------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~ 242 (371)
T cd05622 199 ------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 242 (371)
T ss_pred ------------------------------------cccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh
Confidence 012247899999999997543 7899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhccc--CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
||............+... ...+.....++.+.+||.+||..++.+ |++++++++||||...
T Consensus 243 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 243 GDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 886554433333322221 122333456788899999999854443 7899999999999764
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-30 Score=303.32 Aligned_cols=206 Identities=17% Similarity=0.177 Sum_probs=160.2
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhc-----
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ----- 101 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~----- 101 (879)
..+....|++++.+++ ++.++....+||||||+.+++|.++|.. ....+++..++.|+.||+.||+|||+.
T Consensus 64 ~IL~~L~HPNIVrl~d-~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~ 142 (1021)
T PTZ00266 64 NVMRELKHKNIVRYID-RFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPN 142 (1021)
T ss_pred HHHHHcCCCCcCeEEE-EEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 3455678888888777 4444455568999999999999999853 235689999999999999999999984
Q ss_pred --CcccccCCCcceeecc-----------------CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhh
Q 002801 102 --GIVVHNVRPSCFVMSS-----------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 102 --givHrDlKP~NIll~~-----------------~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
+||||||||+||||+. .+.+||+|||+++.......
T Consensus 143 ~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~------------------------- 197 (1021)
T PTZ00266 143 GERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESM------------------------- 197 (1021)
T ss_pred cCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccccc-------------------------
Confidence 4999999999999964 23489999999865321100
Q ss_pred hhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccc
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
....+||+.|+|||
T Consensus 198 ------------------------------------------------------------------~~s~vGTp~YmAPE 211 (1021)
T PTZ00266 198 ------------------------------------------------------------------AHSCVGTPYYWSPE 211 (1021)
T ss_pred ------------------------------------------------------------------ccccCCCccccCHH
Confidence 01247899999999
Q ss_pred cccCC--CCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 243 ELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 243 ~~~~~--~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
++.+. .++.++||||||||||||++ ||.........+..+...... .....++.+.+||..||..+|.+||++.
T Consensus 212 vL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~l-pi~~~S~eL~dLI~~~L~~dPeeRPSa~ 290 (1021)
T PTZ00266 212 LLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDL-PIKGKSKELNILIKNLLNLSAKERPSAL 290 (1021)
T ss_pred HHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCC-CcCCCCHHHHHHHHHHhcCChhHCcCHH
Confidence 99653 48999999999999999999 886655544444444433222 2234567899999999999999999999
Q ss_pred HHhhcccccCC
Q 002801 318 ELLQSEFLNEP 328 (879)
Q Consensus 318 evl~hp~~~~~ 328 (879)
|+|+||||...
T Consensus 291 QlL~h~~ik~i 301 (1021)
T PTZ00266 291 QCLGYQIIKNV 301 (1021)
T ss_pred HHhccHHHhhc
Confidence 99999999643
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.2e-30 Score=258.26 Aligned_cols=226 Identities=18% Similarity=0.223 Sum_probs=171.2
Q ss_pred cccccccccccCCCC----CcccccccCceeecccccccCCCCCCccccc----ccccCceEEEEeeCCcchhhhhcCCC
Q 002801 5 LLRGERFGVRGDDSN----DFELRKHSDGVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDKPK 76 (879)
Q Consensus 5 ~~~~~~~~~~~~~~~----~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lv~e~~~g~sL~~~l~~~~ 76 (879)
.+.+.+++.+.+..+ .+.-|..++.....+.+|+|+++++. +... +...+.|+|||++ ..+|.+.+.
T Consensus 38 ~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n-~ftP~~~l~~~~e~y~v~e~m-~~nl~~vi~--- 112 (369)
T KOG0665|consen 38 QVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLN-VFTPQKTLEEFQEVYLVMELM-DANLCQVIL--- 112 (369)
T ss_pred hhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeee-ccCccccHHHHHhHHHHHHhh-hhHHHHHHH---
Confidence 455667777665544 22337778888899999999999888 3322 3345789999999 678998875
Q ss_pred CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCc
Q 002801 77 RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (879)
Q Consensus 77 ~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (879)
-.++-..+..|+.|++.|+.|||+.||+||||||+||++..+..+|+.|||+|+..+.+
T Consensus 113 ~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--------------------- 171 (369)
T KOG0665|consen 113 MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--------------------- 171 (369)
T ss_pred HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc---------------------
Confidence 23678899999999999999999999999999999999999999999999999663211
Q ss_pred chhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccccccc
Q 002801 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (879)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (879)
+.++..++|.
T Consensus 172 ----------------------------------------------------------------------~~mtpyVvtR 181 (369)
T KOG0665|consen 172 ----------------------------------------------------------------------FMMTPYVVTR 181 (369)
T ss_pred ----------------------------------------------------------------------cccCchhhee
Confidence 1346679999
Q ss_pred ceeccccccCCCCCccCcchhHHHHHHHhhc--CCCCChhhHhHH---------------hhhcc---------------
Q 002801 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTM---------------SSLRH--------------- 284 (879)
Q Consensus 237 ~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~---------------~~~~~--------------- 284 (879)
.|+|||++.+..|...+||||+||++.||+. -++++..+...+ ..+..
T Consensus 182 yyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~ 261 (369)
T KOG0665|consen 182 YYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAI 261 (369)
T ss_pred eccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhcc
Confidence 9999999999999999999999999999998 222232222111 11100
Q ss_pred ---cCCC-----chh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 285 ---RVLP-----PQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 285 ---~~~~-----~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
..+| ... ......+.+++.+||..+|++|.+++++|+|||++
T Consensus 262 ~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 262 SFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred chhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 0011 000 01123467999999999999999999999999997
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=272.48 Aligned_cols=205 Identities=16% Similarity=0.181 Sum_probs=157.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..+. .+. .....|++|||+.|++|..++.. ....+++..+..++.||+.||+|||+.||+|||||
T Consensus 46 il~~l~hp~i~~~~~-~~~--~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik 122 (277)
T cd05607 46 ILEKVNSPFIVNLAY-AFE--SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMK 122 (277)
T ss_pred HHHhcCCCcEEEEEE-EEe--cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCC
Confidence 455667888877655 333 34568999999999999988843 33458999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++|+|||++.......
T Consensus 123 p~Nili~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------------- 149 (277)
T cd05607 123 PENVLLDDQGNCRLSDLGLAVELKDGK----------------------------------------------------- 149 (277)
T ss_pred hHhEEEcCCCCEEEeeceeeeecCCCc-----------------------------------------------------
Confidence 999999999999999999986531110
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......||..|+|||++.+..++.++|||||||+||||++
T Consensus 150 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~ 191 (277)
T cd05607 150 --------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGR 191 (277)
T ss_pred --------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCC
Confidence 0012367889999999998889999999999999999999
Q ss_pred -CCCCChhhH---hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccccCCc
Q 002801 268 -PFSTGEEKT---RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~~~~~ 329 (879)
||....... ...........+......++.+.+|+.+||.+||.+||++ .+++.||||+...
T Consensus 192 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 192 TPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred CCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 775432211 1112222222222223466788999999999999999999 6788999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=278.13 Aligned_cols=208 Identities=17% Similarity=0.153 Sum_probs=148.3
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC--------CCCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~--------~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
...+...+|+|++..+. ++........|++|||+. ++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 49 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~ 126 (317)
T cd07867 49 IALLRELKHPNVIALQK-VFLSHSDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA 126 (317)
T ss_pred HHHHHhCCCCCeeeEEE-EEeccCCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 33455567888877666 554455567899999986 478777631 12358899999999999999999999
Q ss_pred cCcccccCCCcceee----ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccC
Q 002801 101 QGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (879)
Q Consensus 101 ~givHrDlKP~NIll----~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (879)
+||+||||||+|||+ +..+.+||+|||+++.........
T Consensus 127 ~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~------------------------------------- 169 (317)
T cd07867 127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL------------------------------------- 169 (317)
T ss_pred CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccc-------------------------------------
Confidence 999999999999999 456789999999997642210000
Q ss_pred CCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcc
Q 002801 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDI 255 (879)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDI 255 (879)
.......||+.|+|||++.+. .++.++||
T Consensus 170 --------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 199 (317)
T cd07867 170 --------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKAIDI 199 (317)
T ss_pred --------------------------------------------------cccCcceecccccCcHHhcCCCccCcHHHH
Confidence 001224789999999999774 48999999
Q ss_pred hhHHHHHHHhhc---CCCCChhhHh---------H---Hh-----------hhcc-------------cCC---------
Q 002801 256 YRLGVLLFELFC---PFSTGEEKTR---------T---MS-----------SLRH-------------RVL--------- 287 (879)
Q Consensus 256 wSlGvil~ell~---pf~~~~~~~~---------~---~~-----------~~~~-------------~~~--------- 287 (879)
|||||++|||++ ||........ . .. .+.. ...
T Consensus 200 wSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (317)
T cd07867 200 WAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYM 279 (317)
T ss_pred HhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhh
Confidence 999999999999 6643221100 0 00 0000 000
Q ss_pred CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 288 PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 288 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
..........+.+|+.+||..||.+|||+.|+|+||||
T Consensus 280 ~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 280 EKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00001123456789999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=270.03 Aligned_cols=199 Identities=15% Similarity=0.159 Sum_probs=152.5
Q ss_pred ccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 36 DHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+|++++..++ .+.++. ....|++|||+.+++|.+++... ...+++..++.++.||+.||+|||++||+||||||
T Consensus 61 ~h~~i~~~~~-~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~ 139 (272)
T cd06637 61 HHRNIATYYG-AFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKG 139 (272)
T ss_pred CCCCeeeEee-EEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCH
Confidence 5777776665 333221 23579999999999999999653 34689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++........
T Consensus 140 ~nili~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 166 (272)
T cd06637 140 QNVLLTENAEVKLVDFGVSAQLDRTVG----------------------------------------------------- 166 (272)
T ss_pred HHEEECCCCCEEEccCCCceecccccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|+..|+|||++. +..++.++|||||||++|||
T Consensus 167 -------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el 209 (272)
T cd06637 167 -------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 209 (272)
T ss_pred -------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHH
Confidence 012247889999999986 33588999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
++ ||.........................+..+.+|+.+||..+|.+|||+.+++.||||
T Consensus 210 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 210 AEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 99 6654433333322222222222223455788999999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=277.33 Aligned_cols=205 Identities=13% Similarity=0.172 Sum_probs=154.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+++ +|.+++......+++.+++.++.||+.||+|||++||+||||||
T Consensus 57 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp 132 (309)
T cd07872 57 LLKDLKHANIVTLHD-IVHT--DKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKP 132 (309)
T ss_pred HHHhCCCCCcceEEE-EEee--CCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 445567888888777 4443 3468999999975 89888866556689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.......
T Consensus 133 ~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------------- 159 (309)
T cd07872 133 QNLLINERGELKLADFGLARAKSVPTK----------------------------------------------------- 159 (309)
T ss_pred HHEEECCCCCEEECccccceecCCCcc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~-- 267 (879)
......+|+.|+|||.+.+. .++.++|||||||++|||++
T Consensus 160 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~ 202 (309)
T cd07872 160 -------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGR 202 (309)
T ss_pred -------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 00113678899999998764 58999999999999999999
Q ss_pred -CCCCChhhHhHHhhhc--cc------------------CCC--------chhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLR--HR------------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~--~~------------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||.............+ .. ..+ ......++.+.+||.+||..||.+|||+.|
T Consensus 203 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e 282 (309)
T cd07872 203 PLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEE 282 (309)
T ss_pred CCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHH
Confidence 6654332221111110 00 000 011234567889999999999999999999
Q ss_pred HhhcccccCCc
Q 002801 319 LLQSEFLNEPR 329 (879)
Q Consensus 319 vl~hp~~~~~~ 329 (879)
+++||||+...
T Consensus 283 ~l~h~~~~~~~ 293 (309)
T cd07872 283 AMKHAYFRSLG 293 (309)
T ss_pred HhcChhhhhcc
Confidence 99999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-30 Score=284.16 Aligned_cols=206 Identities=19% Similarity=0.221 Sum_probs=152.3
Q ss_pred CceeecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+...+...+|++++..++ ++... .....|++|||+++ +|.+++.. .+++..+..++.||+.||+|||++||
T Consensus 66 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~gi 140 (355)
T cd07874 66 ELVLMKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGI 140 (355)
T ss_pred HHHHHHHhCCCchhceee-eeeccccccccceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 334455567888887766 43322 22357999999965 67777743 47899999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+||||||+|||++.++.+||+|||+++......
T Consensus 141 vHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 173 (355)
T cd07874 141 IHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------------------------------------- 173 (355)
T ss_pred ccCCCChHHEEECCCCCEEEeeCcccccCCCcc-----------------------------------------------
Confidence 999999999999999999999999986532110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
......||+.|+|||++.+..++.++|||||||+||
T Consensus 174 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ 209 (355)
T cd07874 174 --------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209 (355)
T ss_pred --------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 001247899999999999988999999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcc----------------------c------CCCc------------hhhccChhhHH
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRH----------------------R------VLPP------------QLLLKFPKEAS 300 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~----------------------~------~~~~------------~~~~~~~~~~~ 300 (879)
||++ ||............+.. . ..+. ........+.+
T Consensus 210 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (355)
T cd07874 210 EMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARD 289 (355)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHH
Confidence 9999 77544322111110000 0 0000 00112345789
Q ss_pred HHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 301 FCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 301 li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||.+||..||++|||+.|+|+||||....
T Consensus 290 li~~mL~~dP~~Rps~~ell~hp~~~~~~ 318 (355)
T cd07874 290 LLSKMLVIDPAKRISVDEALQHPYINVWY 318 (355)
T ss_pred HHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence 99999999999999999999999997543
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-27 Score=287.79 Aligned_cols=278 Identities=15% Similarity=0.237 Sum_probs=218.5
Q ss_pred CceecccccCceEEEeecCcEEE-EEec--cccccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCccccc
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVK-ADLN--QGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHY 609 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~-~~l~--~~~l~~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~ 609 (879)
..++++..|+.|++|+..+.... .... ... ..+...|.+++|++ ++.+||+|+.||+|+|||+.+...
T Consensus 496 ~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~------- 567 (793)
T PLN00181 496 EFFATAGVNKKIKIFECESIIKDGRDIHYPVVE-LASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQL------- 567 (793)
T ss_pred CEEEEEeCCCEEEEEECCcccccccccccceEE-ecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeE-------
Confidence 44689999999999997642100 0000 011 13346899999987 578999999999999999875311
Q ss_pred ceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEe
Q 002801 610 PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWS 689 (879)
Q Consensus 610 ~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd 689 (879)
......|...|.+++|+|.++.+|++|+.||+|++||+.+++.+..+..+ ..|+++.|++.++.+|++|+.||.|++||
T Consensus 568 ~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD 646 (793)
T PLN00181 568 VTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGRSLAFGSADHKVYYYD 646 (793)
T ss_pred EEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEE
Confidence 11223588899999999877899999999999999999999988888654 68999999765799999999999999999
Q ss_pred CCCCc-eEEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCC-----ceeeEEEccCCCCEEEEEEc-CCCEEE
Q 002801 690 INQGV-SIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS-----KIPLCTLIGHNKTVSYVKFV-DATTLV 761 (879)
Q Consensus 690 ~~~~~-~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~-----~~~~~~~~~h~~~V~~v~fs-~~~~l~ 761 (879)
+++.. ++.++. +...|.++.|. + +.+|++++.|++|++||++.. ..++..+.+|...+..+.|+ ++.+|+
T Consensus 647 ~~~~~~~~~~~~~h~~~V~~v~f~-~-~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~la 724 (793)
T PLN00181 647 LRNPKLPLCTMIGHSKTVSYVRFV-D-SSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIA 724 (793)
T ss_pred CCCCCccceEecCCCCCEEEEEEe-C-CCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEE
Confidence 98765 455555 45679999997 4 678999999999999999853 23578899999999999999 899999
Q ss_pred EEEcCCcEEEEecCCCcccc-----cCCce--EEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 762 SASTDNTLKLWDLSMCTSRV-----IDTPL--HSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 762 s~s~D~~i~lwd~~~~~~~~-----~~~~~--~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
+|+.|++|++|+........ ....+ .....|...|++++|+|++.+|++|+.||.|+||++
T Consensus 725 sgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 725 TGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred EEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 99999999999987542100 00001 112345567999999999999999999999999986
|
|
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=283.43 Aligned_cols=209 Identities=18% Similarity=0.216 Sum_probs=155.4
Q ss_pred CceeecccccccCCCCCCccccccc---ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
+...+...+|+|++..++ ++.++. ....|++|||+. ++|.+++... ..+++.+++.+++||+.||.|||++||+
T Consensus 49 E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 49 ELKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGIL 125 (372)
T ss_pred HHHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccc-cCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 333455667888888776 444332 125799999996 5888888554 5789999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+|||++.++.+||+|||+++........
T Consensus 126 H~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~---------------------------------------------- 159 (372)
T cd07853 126 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK---------------------------------------------- 159 (372)
T ss_pred CCCCChHHEEECCCCCEEeccccceeecccCccc----------------------------------------------
Confidence 9999999999999999999999998653111000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ 263 (879)
..+...+|++|+|||++.+.. ++.++|||||||++|
T Consensus 160 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 196 (372)
T cd07853 160 -------------------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFA 196 (372)
T ss_pred -------------------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHH
Confidence 012236789999999998754 899999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhh----------------------h-cccCCCch-------hhccChhhHHHHHHhcCCCC
Q 002801 264 ELFC---PFSTGEEKTRTMSS----------------------L-RHRVLPPQ-------LLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~----------------------~-~~~~~~~~-------~~~~~~~~~~li~~~L~~dP 310 (879)
||++ ||............ + .....++. ....++.+.+||.+||+.||
T Consensus 197 el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP 276 (372)
T cd07853 197 ELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDP 276 (372)
T ss_pred HHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCCh
Confidence 9999 66543322111100 0 11111111 12235678899999999999
Q ss_pred CCCCCHHHHhhcccccCC
Q 002801 311 SGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~~~~ 328 (879)
.+|||+.|+++||||...
T Consensus 277 ~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 277 DKRISAADALAHPYLDEG 294 (372)
T ss_pred hhCcCHHHHhcCHhhCCC
Confidence 999999999999999864
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=272.57 Aligned_cols=205 Identities=15% Similarity=0.150 Sum_probs=159.5
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
..+.+.+|++++..++ .+.+ ....|++|||+.|++|..++.. ....+++.++..++.||+.||.|||+.||+||||
T Consensus 52 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dl 128 (285)
T cd05605 52 QILEKVNSRFVVSLAY-AYET--KDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDL 128 (285)
T ss_pred HHHHhcCCCCEeeeee-eecC--CCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCC
Confidence 3455667888877766 4433 3468999999999999998843 3346899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||+++......
T Consensus 129 kp~Nil~~~~~~~~l~Dfg~~~~~~~~~---------------------------------------------------- 156 (285)
T cd05605 129 KPENILLDDYGHIRISDLGLAVEIPEGE---------------------------------------------------- 156 (285)
T ss_pred CHHHEEECCCCCEEEeeCCCceecCCCC----------------------------------------------------
Confidence 9999999999999999999986531100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....+|++.|+|||++.+..++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g 197 (285)
T cd05605 157 ---------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG 197 (285)
T ss_pred ---------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHC
Confidence 0012368999999999998889999999999999999998
Q ss_pred --CCCCChhhHh---HHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 --PFSTGEEKTR---TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 --pf~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||........ ....+.. ..+..+...++.+.+|+.+||..||.+|| +++++++||||....
T Consensus 198 ~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05605 198 KSPFRQRKEKVKREEVERRVKE-DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268 (285)
T ss_pred CCCCCCCchhhHHHHHHHHhhh-cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCC
Confidence 7765432211 1122221 11222334567789999999999999999 899999999998643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-30 Score=291.51 Aligned_cols=202 Identities=21% Similarity=0.283 Sum_probs=154.8
Q ss_pred cccccCCCCCCcccc---ccc-ccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcC--ccccc
Q 002801 35 GDHLRNQGGLSGVCE---NEA-AIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG--IVVHN 107 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~---~~~-~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~g--ivHrD 107 (879)
..|+|+|.+++.... ... ....+|.||||.||+|-++|++ ....|++.++++||.|+++||.+||.+. |||||
T Consensus 92 ~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRD 171 (738)
T KOG1989|consen 92 SGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRD 171 (738)
T ss_pred cCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhh
Confidence 478888887772111 222 3568999999999999999942 2345999999999999999999999998 99999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCC-cccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDS-HEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||-|||||+.+|+.||||||.+...-... ...++
T Consensus 172 LKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~--------------------------------------------- 206 (738)
T KOG1989|consen 172 LKIENVLLSADGNYKLCDFGSATTKILSPTSAQEV--------------------------------------------- 206 (738)
T ss_pred hhhhheEEcCCCCEEeCcccccccccCCCccHHHH---------------------------------------------
Confidence 99999999999999999999986521110 00000
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHH
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ 263 (879)
..++.+ ....-|+.|+|||++. +.+.+.|+|||+|||+||
T Consensus 207 --------------------------~~ve~e-----------I~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLY 249 (738)
T KOG1989|consen 207 --------------------------NYVEEE-----------IEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLY 249 (738)
T ss_pred --------------------------HHHHHH-----------HHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHH
Confidence 000000 1123489999999884 677999999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
-|+. ||..... ..++......|.+..++..+.+||..||+.||.+||++.+++.+
T Consensus 250 kLCy~t~PFe~sg~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 250 KLCYFTTPFEESGK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred HHHHhCCCcCcCcc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 9987 9965432 24455555556667788899999999999999999999999874
|
|
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=285.58 Aligned_cols=208 Identities=15% Similarity=0.173 Sum_probs=155.5
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..+. ++.+ ....|++||++. ++|.+++.. ...+++.+++.|+.||+.||.|||++||||||
T Consensus 136 E~~il~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givHrD 210 (392)
T PHA03207 136 EIDILKTISHRAIINLIH-AYRW--KSTVCMVMPKYK-CDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIHRD 210 (392)
T ss_pred HHHHHHhcCCCCccceee-eEee--CCEEEEEehhcC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence 333455677888888776 3332 346799999995 689999843 35789999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++..+.++|+|||+++........
T Consensus 211 lkp~Nill~~~~~~~l~DfG~a~~~~~~~~~------------------------------------------------- 241 (392)
T PHA03207 211 VKTENIFLDEPENAVLGDFGAACKLDAHPDT------------------------------------------------- 241 (392)
T ss_pred CCHHHEEEcCCCCEEEccCccccccCccccc-------------------------------------------------
Confidence 9999999999999999999998653211000
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
.......||+.|+|||++.+..++.++|||||||+||||++
T Consensus 242 ---------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~ 282 (392)
T PHA03207 242 ---------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSV 282 (392)
T ss_pred ---------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHH
Confidence 00122478999999999999899999999999999999998
Q ss_pred ---CCCCChhhH------hHHhhhc----------------------ccCCC----chh---hccChhhHHHHHHhcCCC
Q 002801 268 ---PFSTGEEKT------RTMSSLR----------------------HRVLP----PQL---LLKFPKEASFCLWLLHPE 309 (879)
Q Consensus 268 ---pf~~~~~~~------~~~~~~~----------------------~~~~~----~~~---~~~~~~~~~li~~~L~~d 309 (879)
||+...... .....+. ....+ +.. ......+.+||.+||..|
T Consensus 283 g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d 362 (392)
T PHA03207 283 KNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFD 362 (392)
T ss_pred CCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccC
Confidence 775532110 0000000 00000 000 123456789999999999
Q ss_pred CCCCCCHHHHhhcccccCC
Q 002801 310 PSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 310 P~~Rpt~~evl~hp~~~~~ 328 (879)
|.+|||+.|+|.||||...
T Consensus 363 p~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 363 QEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred hhhCCCHHHHhhCchhhcc
Confidence 9999999999999999753
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-28 Score=267.83 Aligned_cols=251 Identities=21% Similarity=0.397 Sum_probs=208.3
Q ss_pred cccc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCc----------------------------ccC----------
Q 002801 562 GDLL-NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN---------- 602 (879)
Q Consensus 562 ~~l~-~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~----------------------------~~~---------- 602 (879)
+.+. .|.+.|+++.||+||+|||+||.|+.|+||.+.. ...
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3444 8999999999999999999999999999998754 000
Q ss_pred ----cCcc----------cccceEE-eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEE
Q 002801 603 ----ENRD----------IHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667 (879)
Q Consensus 603 ----~~~~----------~~~~~~~-~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~ 667 (879)
.... ...|+.+ .+|...|.+|+|+. .++|+|++.|.+|++|++...+++..| .|..-|+||+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F-~HndfVTcVa 416 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVF-SHNDFVTCVA 416 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEE-ecCCeeEEEE
Confidence 0000 0012222 36999999999997 799999999999999999999999999 5999999999
Q ss_pred EecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEc--cC
Q 002801 668 FSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI--GH 745 (879)
Q Consensus 668 ~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~--~h 745 (879)
|+|.|.++|++||-||.|+||++...+.+.-...+.-|++|+|.|+ |.+.++|+.+|.+++|+....+. ...+. .|
T Consensus 417 FnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~Pd-Gk~avIGt~~G~C~fY~t~~lk~-~~~~~I~~~ 494 (712)
T KOG0283|consen 417 FNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPD-GKGAVIGTFNGYCRFYDTEGLKL-VSDFHIRLH 494 (712)
T ss_pred ecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccC-CceEEEEEeccEEEEEEccCCeE-EEeeeEeec
Confidence 9999999999999999999999998877766667888999999999 99999999999999999998763 22221 11
Q ss_pred ------CCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcE--EEEEEecCCCEEEEEeCCC
Q 002801 746 ------NKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK--NFVGLSVWDGYVATGSETN 815 (879)
Q Consensus 746 ------~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v--~~v~~sp~~~~lasgs~Dg 815 (879)
.+.|+.+.|. +...++..+.|..|||+|.+.. ..+..|+|+.+.- ....|+.||++|++||+|.
T Consensus 495 ~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~------~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs 568 (712)
T KOG0283|consen 495 NKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDK------DLVHKFKGFRNTSSQISASFSSDGKHIVSASEDS 568 (712)
T ss_pred cCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccch------hhhhhhcccccCCcceeeeEccCCCEEEEeecCc
Confidence 1279999997 5556888889999999999775 6788888776533 4567999999999999999
Q ss_pred cEEEEecC
Q 002801 816 EVFVYHKA 823 (879)
Q Consensus 816 ~v~vw~~~ 823 (879)
.|+||+..
T Consensus 569 ~VYiW~~~ 576 (712)
T KOG0283|consen 569 WVYIWKND 576 (712)
T ss_pred eEEEEeCC
Confidence 99999974
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-28 Score=252.04 Aligned_cols=261 Identities=20% Similarity=0.279 Sum_probs=218.7
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe----------EEEEeccCCCcEEEEEEecCCCCEEEEEeCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ----------VLTEMREHERRVWSIDFSSADPTLLASGSDDG 683 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~----------~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg 683 (879)
+.|.+.|+.+.+.|.+..+||+.+..+.|.|||..+.. +-..+.+|++.-.+++|++...-.+++|++|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 45889999999999999999999999999999986432 12267789988899999998888999999999
Q ss_pred cEEEEeCCCCce-------EEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCC-CceeeEEEccCCCCEEEEEE
Q 002801 684 SVKLWSINQGVS-------IGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRN-SKIPLCTLIGHNKTVSYVKF 754 (879)
Q Consensus 684 ~V~iwd~~~~~~-------i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~-~~~~~~~~~~h~~~V~~v~f 754 (879)
+|.+||+..... ...+. +.+.|..|+|+|....+|++++.|+.+.|||+|+ ..++.....+|...|.|+.|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 999999975432 22333 4566999999999899999999999999999996 33457788899999999999
Q ss_pred c--CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecCCCCCceec
Q 002801 755 V--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 755 s--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
+ ++..|||||.|++|.|||+++. ..+++++.+|...|..|.|||+.. .||++|.|+.+.|||+..-....+.
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL-----~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~ 355 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNL-----NKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSP 355 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhc-----ccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccCh
Confidence 8 8999999999999999999998 478999999999999999999854 8999999999999999764443332
Q ss_pred ccCCCCCCCCCCC-CCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 832 NFNHADPLSGPET-DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 832 ~~~~~~~~~~~~~-~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
......+...... .+|...|+.+.|+|..+++|+++..|+.+.||++.
T Consensus 356 eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 356 EDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred hhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 3222222211111 78999999999999999999999999999999873
|
|
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=278.42 Aligned_cols=205 Identities=15% Similarity=0.189 Sum_probs=158.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+. .....|+||||+.||+|.+++.+....+++..++.++.||+.||+|||++||+||||||+
T Consensus 55 l~~~~~~~i~~l~~-~~~--~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~ 131 (331)
T cd05624 55 LVNGDCQWITTLHY-AFQ--DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPD 131 (331)
T ss_pred HHhCCCCCEeeEEE-EEE--cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchH
Confidence 34456777766655 333 244689999999999999999765567899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+||+|||+++........
T Consensus 132 Nill~~~~~~kl~DfG~a~~~~~~~~~----------------------------------------------------- 158 (331)
T cd05624 132 NVLLDMNGHIRLADFGSCLKMNQDGTV----------------------------------------------------- 158 (331)
T ss_pred HEEEcCCCCEEEEeccceeeccCCCce-----------------------------------------------------
Confidence 999999999999999998653211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHHhh
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~ell 266 (879)
.....+||+.|+|||++.+ ..++.++|||||||+||||+
T Consensus 159 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell 202 (331)
T cd05624 159 ------------------------------------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 202 (331)
T ss_pred ------------------------------------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhh
Confidence 0012478999999999875 45889999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc---CCCchhhccChhhHHHHHHhcCCCCCC--CCCHHHHhhcccccCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 328 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~--Rpt~~evl~hp~~~~~ 328 (879)
+ ||................ .+|+.....++.+.+++.+||..++.+ |++++++++||||...
T Consensus 203 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 203 YGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 9 886554433333333222 233444456788999999999876654 4789999999999864
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-27 Score=234.33 Aligned_cols=268 Identities=16% Similarity=0.233 Sum_probs=225.2
Q ss_pred CCceecccccCceEEEeec-CcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccce
Q 002801 533 RSGWINPFLEGLCKYLSFS-KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV 611 (879)
Q Consensus 533 ~~~~~~~~~d~~i~~w~~~-~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~ 611 (879)
+.-+++|..|..|-+|+.. ..+-... +.+|+++|..+.|.+|+..++++|.|++|+.||++++.....
T Consensus 59 gs~~aSgG~Dr~I~LWnv~gdceN~~~-----lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk------ 127 (338)
T KOG0265|consen 59 GSCFASGGSDRAIVLWNVYGDCENFWV-----LKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRK------ 127 (338)
T ss_pred CCeEeecCCcceEEEEeccccccceee-----eccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeeh------
Confidence 3445999999999999843 3333333 349999999999999999999999999999999998543211
Q ss_pred EEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 002801 612 VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (879)
Q Consensus 612 ~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~ 691 (879)
...|..-++.+.-+.....++.|++.||+++|||+++..+++.+. .+..++++.|.. ++..+.+|+-|+.|++||++
T Consensus 128 -~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d-~s~qv~sggIdn~ikvWd~r 204 (338)
T KOG0265|consen 128 -HKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKD-TSDQVISGGIDNDIKVWDLR 204 (338)
T ss_pred -hccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecc-cccceeeccccCceeeeccc
Confidence 123666777777555556789999999999999999888887773 466899999998 88999999999999999999
Q ss_pred CCceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCC---ceeeEEEccCCC----CEEEEEEc-CCCEEEE
Q 002801 692 QGVSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS---KIPLCTLIGHNK----TVSYVKFV-DATTLVS 762 (879)
Q Consensus 692 ~~~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~---~~~~~~~~~h~~----~V~~v~fs-~~~~l~s 762 (879)
......++..+ ..|+.+..+|+ +.++.+-+.|.++++||+|.. ..++..+.+|.. ......|+ ++..+-.
T Consensus 205 ~~d~~~~lsGh~DtIt~lsls~~-gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~a 283 (338)
T KOG0265|consen 205 KNDGLYTLSGHADTITGLSLSRY-GSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITA 283 (338)
T ss_pred cCcceEEeecccCceeeEEeccC-CCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceeeccCCCCcccc
Confidence 99999888864 56999999999 889999999999999999864 234778887643 34566777 8889999
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
|+.|..+++||.... ..+..+.||...|++++|+|...+|.+|+.|.+|++=.
T Consensus 284 gs~dr~vyvwd~~~r------~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 284 GSADRFVYVWDTTSR------RILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred ccccceEEEeecccc------cEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 999999999999886 78899999999999999999999999999999998744
|
|
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-29 Score=266.75 Aligned_cols=202 Identities=16% Similarity=0.206 Sum_probs=158.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+....|++++..++ .+. .....+|++|||+++++|.++++.. ...+++.+++.++.||+.||+|||+.||+|+|||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~-~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~ 129 (257)
T cd08223 52 LLSQLKHPNIVAYRE-SWE-GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLK 129 (257)
T ss_pred HHHhCCCCCeeeeee-eec-CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 445556777776555 222 1233578999999999999999653 3468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||+++.......
T Consensus 130 p~nil~~~~~~~~l~df~~~~~~~~~~~---------------------------------------------------- 157 (257)
T cd08223 130 TQNVFLTRTNIIKVGDLGIARVLENQCD---------------------------------------------------- 157 (257)
T ss_pred chhEEEecCCcEEEecccceEEecccCC----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 158 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~ 199 (257)
T cd08223 158 --------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLK 199 (257)
T ss_pred --------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCC
Confidence 0012367889999999998889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||...... .....+.....++.....++.+.+++.+||..+|.+||++.++++||||
T Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 200 HAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred CCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 66544332 2223333344444445567889999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=279.27 Aligned_cols=202 Identities=17% Similarity=0.165 Sum_probs=154.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc-CcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-givHrDlK 109 (879)
.+...+|++++..++ ++.+ ...+|++|||+.|++|.++++.. +.+++..+..++.||+.||.|||++ +|+|||||
T Consensus 56 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlk 131 (333)
T cd06650 56 VLHECNSPYIVGFYG-AFYS--DGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 131 (333)
T ss_pred HHHHCCCCcccceeE-EEEE--CCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence 345567888888776 5543 34689999999999999999654 4689999999999999999999985 79999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+||+|||++......
T Consensus 132 p~Nili~~~~~~kL~Dfg~~~~~~~~------------------------------------------------------ 157 (333)
T cd06650 132 PSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------------ 157 (333)
T ss_pred hhhEEEcCCCCEEEeeCCcchhhhhh------------------------------------------------------
Confidence 99999999999999999998543110
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......||..|+|||++.+..++.++|||||||++|||++
T Consensus 158 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~ 199 (333)
T cd06650 158 --------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGR 199 (333)
T ss_pred --------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCC
Confidence 0011367999999999998889999999999999999998
Q ss_pred -CCCCChhhHhHHh-------------------------------------------hhcccCCCchh-hccChhhHHHH
Q 002801 268 -PFSTGEEKTRTMS-------------------------------------------SLRHRVLPPQL-LLKFPKEASFC 302 (879)
Q Consensus 268 -pf~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~-~~~~~~~~~li 302 (879)
||........... .+.....+... ...++++.+|+
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 279 (333)
T cd06650 200 YPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFV 279 (333)
T ss_pred CCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHH
Confidence 7754322111000 00000000000 11345678999
Q ss_pred HHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 303 LWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 303 ~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
.+||++||++|||+.|+++||||+..
T Consensus 280 ~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 280 NKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred HHhccCCcccCcCHHHHhhCHHHhcC
Confidence 99999999999999999999999753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=280.44 Aligned_cols=207 Identities=15% Similarity=0.206 Sum_probs=154.5
Q ss_pred CceeecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+...+...+|++++..++ ++.+. .....|++|+++ |++|.++++. ..+++.+++.|+.||+.||.|||++||
T Consensus 64 E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i 139 (343)
T cd07878 64 ELRLLKHMKHENVIGLLD-VFTPATSIENFNEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGI 139 (343)
T ss_pred HHHHHHhcCCCchhhhhh-hhcccccccccCcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 344455667888877665 33321 223468899987 8899998854 458999999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+||||||+|||++.++.+||+|||+++.....
T Consensus 140 vHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 171 (343)
T cd07878 140 IHRDLKPSNVAVNEDCELRILDFGLARQADDE------------------------------------------------ 171 (343)
T ss_pred ecccCChhhEEECCCCCEEEcCCccceecCCC------------------------------------------------
Confidence 99999999999999999999999998653110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 262 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil 262 (879)
.+...||++|+|||++.+ ..++.++|||||||+|
T Consensus 172 ---------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 206 (343)
T cd07878 172 ---------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIM 206 (343)
T ss_pred ---------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHHH
Confidence 022478999999999977 4589999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhc--cc----------------------CCC-----chhhccChhhHHHHHHhcCCCC
Q 002801 263 FELFC---PFSTGEEKTRTMSSLR--HR----------------------VLP-----PQLLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~--~~----------------------~~~-----~~~~~~~~~~~~li~~~L~~dP 310 (879)
|||++ ||.............. .. ..+ ..+....+.+.+|+.+||..||
T Consensus 207 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp 286 (343)
T cd07878 207 AELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDS 286 (343)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCCh
Confidence 99999 6644322111111000 00 000 0112234567899999999999
Q ss_pred CCCCCHHHHhhcccccCCcCc
Q 002801 311 SGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~~~~~~~ 331 (879)
.+|||+.|+++||||.....+
T Consensus 287 ~~R~s~~ell~hp~~~~~~~~ 307 (343)
T cd07878 287 DKRISASEALAHPYFSQYHDP 307 (343)
T ss_pred hhCCCHHHHhcCcchhccCCC
Confidence 999999999999999875543
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-28 Score=250.23 Aligned_cols=259 Identities=24% Similarity=0.332 Sum_probs=217.8
Q ss_pred cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCc---ccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCC
Q 002801 565 LNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENR---DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (879)
Q Consensus 565 ~~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~---~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg 640 (879)
+.|.+.|+.+.+.| +..++||++..+.|.|||......... .....+...+|...-..|+|++.....|++++.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 47899999999999 556788889999999999976322221 11223345567777888999999899999999999
Q ss_pred cEEEEEcCCCe-------EEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC--CceEEEEe-cCCceEEEEe
Q 002801 641 VVQVWDVSRSQ-------VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ--GVSIGTIK-TKANVCCVQF 710 (879)
Q Consensus 641 ~V~vwd~~~~~-------~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~--~~~i~~~~-~~~~v~~v~~ 710 (879)
+|++||++... +...+.+|+..|..++|++.+..+|+++++|+.+.|||+|+ .++..... +.+.|+|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 99999996432 35567899999999999998899999999999999999995 44444444 4677999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCccc--------
Q 002801 711 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSR-------- 780 (879)
Q Consensus 711 ~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~-------- 780 (879)
+|.++.+||+||.|++|++||+|+...++.++.+|...|..|.|+ ....|+|++.|+.+.+||+..-...
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d 360 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED 360 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence 999999999999999999999999999999999999999999998 7789999999999999999874321
Q ss_pred ccCCceEEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecC
Q 002801 781 VIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKA 823 (879)
Q Consensus 781 ~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~ 823 (879)
.....+..-.||+..|+.+.|+|+.. .|++.++|+.+.||...
T Consensus 361 gppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 361 GPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 12345677789999999999999987 77889999999999876
|
|
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=263.52 Aligned_cols=201 Identities=18% Similarity=0.203 Sum_probs=161.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ...+|++|||+.|++|.+++... ...+++..++.++.||+.||.|||+.||+|+|||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~ 128 (256)
T cd08529 52 VLAKLDSSYIIRYYE-SFLD--KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIK 128 (256)
T ss_pred HHHhcCCCCeehhee-eecc--CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 455678888888777 4433 34689999999999999999553 4578999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||+++.......
T Consensus 129 ~~nili~~~~~~~l~df~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd08529 129 SLNLFLDAYDNVKIGDLGVAKLLSDNTN---------------------------------------------------- 156 (256)
T ss_pred cceEEEeCCCCEEEcccccceeccCccc----------------------------------------------------
Confidence 9999999999999999999865421100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+++|+|||++.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 198 (256)
T cd08529 157 --------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGK 198 (256)
T ss_pred --------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCC
Confidence 0012367889999999999889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||....... ..........++......+.+.+++.+||+.+|++||++.++++|||+
T Consensus 199 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 199 HPFDANNQGA-LILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred CCCCCCCHHH-HHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 776554333 233333344444444566789999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-27 Score=227.77 Aligned_cols=241 Identities=19% Similarity=0.300 Sum_probs=213.5
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~ 694 (879)
.+.++|..+.||- ++++.++++.|.+|++|+.-.+.+++++.+|...|..++.+. |...|++|+.|..|.+||+++|+
T Consensus 15 ~~qgaV~avryN~-dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~-Dnskf~s~GgDk~v~vwDV~TGk 92 (307)
T KOG0316|consen 15 CAQGAVRAVRYNV-DGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSS-DNSKFASCGGDKAVQVWDVNTGK 92 (307)
T ss_pred ccccceEEEEEcc-CCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccc-cccccccCCCCceEEEEEcccCe
Confidence 4678999999998 599999999999999999999999999999999999999998 88999999999999999999999
Q ss_pred eEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc-eeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEE
Q 002801 695 SIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-IPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLW 772 (879)
Q Consensus 695 ~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~-~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lw 772 (879)
.++.+..| +.|+.|+|+-+ ...+++|+.|.++++||.|+.. .|+..+......|.+|..+ +..|++||.||+++.|
T Consensus 93 v~Rr~rgH~aqVNtV~fNee-sSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~-~heIvaGS~DGtvRty 170 (307)
T KOG0316|consen 93 VDRRFRGHLAQVNTVRFNEE-SSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA-EHEIVAGSVDGTVRTY 170 (307)
T ss_pred eeeecccccceeeEEEecCc-ceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec-ccEEEeeccCCcEEEE
Confidence 99999864 66999999998 7899999999999999999764 5788888888899999885 7789999999999999
Q ss_pred ecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEE
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFIS 852 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 852 (879)
|++.+ .....+-+ .+|+++.|+++++....++.|+++++.|..+++.+.+++- +.+ ..+=.
T Consensus 171 diR~G------~l~sDy~g--~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG-hkn----------~eykl 231 (307)
T KOG0316|consen 171 DIRKG------TLSSDYFG--HPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG-HKN----------MEYKL 231 (307)
T ss_pred Eeecc------eeehhhcC--CcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc-ccc----------ceeee
Confidence 99998 33333434 4799999999999999999999999999999999988862 221 34556
Q ss_pred EEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 853 SVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 853 ~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
..|++.... .+++|+.||.+.+|+|+
T Consensus 232 dc~l~qsdt-hV~sgSEDG~Vy~wdLv 257 (307)
T KOG0316|consen 232 DCCLNQSDT-HVFSGSEDGKVYFWDLV 257 (307)
T ss_pred eeeecccce-eEEeccCCceEEEEEec
Confidence 777877777 89999999999999986
|
|
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=276.75 Aligned_cols=208 Identities=20% Similarity=0.181 Sum_probs=170.4
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
+++..+...+|||++..|. +. +....+|+||||+.||.|+++|.+.+ .+.+.+++.+|.|++.||+|||+++||||
T Consensus 104 rev~imk~l~HPnIvkl~~-v~--~t~~~lylV~eya~~ge~~~yl~~~g-r~~e~~ar~~F~q~vsaveYcH~k~ivHr 179 (596)
T KOG0586|consen 104 REVDIMKSLNHPNIVKLFS-VI--ETEATLYLVMEYASGGELFDYLVKHG-RMKEKEARAKFRQIVSAVEYCHSKNIVHR 179 (596)
T ss_pred HHHHHHHhcCCcceeeeee-ee--eecceeEEEEEeccCchhHHHHHhcc-cchhhhhhhhhHHHHHHHHHHhhcceecc
Confidence 4444556678999988888 33 35567899999999999999997764 56779999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
|||.+||||+.+..+||+|||++..+....
T Consensus 180 dLk~eNilL~~~mnikIaDfgfS~~~~~~~-------------------------------------------------- 209 (596)
T KOG0586|consen 180 DLKAENILLDENMNIKIADFGFSTFFDYGL-------------------------------------------------- 209 (596)
T ss_pred ccchhhcccccccceeeeccccceeecccc--------------------------------------------------
Confidence 999999999999999999999987653110
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCC-CccCcchhHHHHHHHh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLFEL 265 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDIwSlGvil~el 265 (879)
.....+|++.|+|||++.|..| ++.+|+|||||+||-|
T Consensus 210 -----------------------------------------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~L 248 (596)
T KOG0586|consen 210 -----------------------------------------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYAL 248 (596)
T ss_pred -----------------------------------------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheee
Confidence 0123599999999999999886 7899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
++ ||....-....-..++....-|.+ .+.++.++|.++|.++|.+|+++++++.|.|++.....
T Consensus 249 V~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 249 VEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred eecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 99 997665544444445544444443 44778999999999999999999999999999865443
|
|
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=266.88 Aligned_cols=206 Identities=17% Similarity=0.149 Sum_probs=157.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.++.....|++|||+.+++|.+++... ..+++..++.++.||+.||+|||++||+||||||
T Consensus 57 ~l~~l~h~~i~~~~~-~~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p 134 (266)
T cd06651 57 LLKNLQHERIVQYYG-CLRDRAEKTLTIFMEYMPGGSVKDQLKAY-GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKG 134 (266)
T ss_pred HHHHcCCCCeeeEEE-EEEcCCCCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCH
Confidence 455567888877665 44444455689999999999999999654 4589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++.........
T Consensus 135 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~--------------------------------------------------- 163 (266)
T cd06651 135 ANILRDSAGNVKLGDFGASKRLQTICMSG--------------------------------------------------- 163 (266)
T ss_pred HHEEECCCCCEEEccCCCccccccccccC---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~ 207 (266)
T cd06651 164 ------------------------------------TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKP 207 (266)
T ss_pred ------------------------------------CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCC
Confidence 00012357889999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
||..................+.......+.+.+++ +||..+|++||+++|+++||||+
T Consensus 208 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 208 PWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred CccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 77554333333322222222322334456677887 67788999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=267.99 Aligned_cols=208 Identities=15% Similarity=0.170 Sum_probs=158.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.. ....|++|||++|++|..++.+....+++..++.++.||+.||.|||++||+||||||
T Consensus 62 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp 138 (292)
T cd06644 62 ILATCNHPYIVKLLG-AFYW--DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKA 138 (292)
T ss_pred HHHhCCCCcEeeeEE-EEEe--CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCc
Confidence 345667888877666 4433 3468999999999999998865556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||++........
T Consensus 139 ~Nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------- 165 (292)
T cd06644 139 GNVLLTLDGDIKLADFGVSAKNVKTLQ----------------------------------------------------- 165 (292)
T ss_pred ceEEEcCCCCEEEccCccceecccccc-----------------------------------------------------
Confidence 999999999999999998754211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|++.|+|||.+. ...++.++|||||||++|||
T Consensus 166 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el 208 (292)
T cd06644 166 -------------------------------------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208 (292)
T ss_pred -------------------------------------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHH
Confidence 011236788999999985 34478899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCch
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~ 332 (879)
++ ||....... ....+.....+ +.....+..+.+++.+||..+|++||++.++++||||.......
T Consensus 209 ~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~ 279 (292)
T cd06644 209 AQIEPPHHELNPMR-VLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNR 279 (292)
T ss_pred hcCCCCCccccHHH-HHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccch
Confidence 99 664433222 22222222221 12234557789999999999999999999999999998765544
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-29 Score=256.19 Aligned_cols=188 Identities=19% Similarity=0.256 Sum_probs=158.4
Q ss_pred ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCC
Q 002801 53 AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 53 ~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~ 132 (879)
-..+|+||||+.||+|--.|++- +++-++.+..++.+|+-||-|||++|||.||||.+||||+..|++||+|||+|+.-
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~-GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQV-GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHh-cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccc
Confidence 34689999999999999998665 57899999999999999999999999999999999999999999999999999762
Q ss_pred CCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccc
Q 002801 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (879)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (879)
-.+ +
T Consensus 501 i~~----~------------------------------------------------------------------------ 504 (683)
T KOG0696|consen 501 IFD----G------------------------------------------------------------------------ 504 (683)
T ss_pred ccC----C------------------------------------------------------------------------
Confidence 111 0
Q ss_pred cchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCc
Q 002801 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289 (879)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~ 289 (879)
.....++|||-|+|||++.-.+|+.++|+||+||+|||||. ||.+..+......+..+....|
T Consensus 505 --------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP 570 (683)
T KOG0696|consen 505 --------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP 570 (683)
T ss_pred --------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc
Confidence 01235799999999999999999999999999999999999 8877766666666666665544
Q ss_pred hhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccccCCcCchH
Q 002801 290 QLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEPRDSME 333 (879)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~~~~~~~~~ 333 (879)
. ..+.++.+++..+|.+.|.+|..+ .+|..||||+.+.....
T Consensus 571 K--slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~ 617 (683)
T KOG0696|consen 571 K--SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKL 617 (683)
T ss_pred c--cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHH
Confidence 4 445788899999999999999653 67999999997765433
|
|
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-29 Score=270.25 Aligned_cols=201 Identities=16% Similarity=0.196 Sum_probs=152.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+. ++|.+++......+++..++.++.||++||.|||++||+||||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~ 127 (284)
T cd07839 52 LLKELKHKNIVRLYD-VLHS--DKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKP 127 (284)
T ss_pred HHHhcCCCCeeeHHH-Hhcc--CCceEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence 344557788777666 4433 346899999996 588888865556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||+++..+....
T Consensus 128 ~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 154 (284)
T cd07839 128 QNLLINKNGELKLADFGLARAFGIPVR----------------------------------------------------- 154 (284)
T ss_pred HHEEEcCCCcEEECccchhhccCCCCC-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 155 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~ 197 (284)
T cd07839 155 -------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 197 (284)
T ss_pred -------------------------------------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcC
Confidence 001135688999999987754 7999999999999999998
Q ss_pred -CCCCChhhHhHHhhhcc-------------------cCCC---------chhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLRH-------------------RVLP---------PQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~-------------------~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||+...........+.. ...+ +.....++.+.+|+.+||..||.+|||+++
T Consensus 198 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ 277 (284)
T cd07839 198 RPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEE 277 (284)
T ss_pred CCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHH
Confidence 76554433222211110 0000 111234567889999999999999999999
Q ss_pred Hhhcccc
Q 002801 319 LLQSEFL 325 (879)
Q Consensus 319 vl~hp~~ 325 (879)
++.||||
T Consensus 278 il~h~~f 284 (284)
T cd07839 278 ALQHPYF 284 (284)
T ss_pred HhcCCCC
Confidence 9999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-29 Score=267.34 Aligned_cols=205 Identities=13% Similarity=0.130 Sum_probs=158.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+.+++|..++.+...++++..++.++.||+.||.|||+.||+||||||
T Consensus 55 ~l~~l~h~~ii~~~~-~~~~--~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp 131 (282)
T cd06643 55 ILASCDHPNIVKLLD-AFYY--ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKA 131 (282)
T ss_pred HHHHCCCCCeeeEEE-EEee--CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCc
Confidence 344567888877666 4433 3467999999999999998865556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++........
T Consensus 132 ~nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------- 158 (282)
T cd06643 132 GNILFTLDGDIKLADFGVSAKNTRTIQ----------------------------------------------------- 158 (282)
T ss_pred ccEEEccCCCEEEcccccccccccccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|+..|+|||++. +..++.++|||||||++|||
T Consensus 159 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el 201 (282)
T cd06643 159 -------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201 (282)
T ss_pred -------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHH
Confidence 001236788999999984 34578899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccC-CCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
++ ||................. ..+.....+..+.+||.+||..+|.+||++.++++||||...
T Consensus 202 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 202 AQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred ccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 98 6654443333333222211 112233456789999999999999999999999999999854
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=249.29 Aligned_cols=197 Identities=17% Similarity=0.227 Sum_probs=158.6
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc-CcccccCCCccee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNVRPSCFV 114 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-givHrDlKP~NIl 114 (879)
+-+-+|..|+ .+. .+.+.+|.||.+ +..+..+|++-.+++++..+-++..-++.||.||..+ ||||||+||+|||
T Consensus 149 dcpyIV~c~G-yFi--~n~dV~IcMelM-s~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNIL 224 (391)
T KOG0983|consen 149 DCPYIVQCFG-YFI--TNTDVFICMELM-STCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNIL 224 (391)
T ss_pred CCCeeeeeee-EEe--eCchHHHHHHHH-HHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceE
Confidence 4455555555 222 344678888887 6677778877778899999999999999999999874 8999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
|+..|++|+||||++-.+-..
T Consensus 225 lDe~GniKlCDFGIsGrlvdS----------------------------------------------------------- 245 (391)
T KOG0983|consen 225 LDERGNIKLCDFGISGRLVDS----------------------------------------------------------- 245 (391)
T ss_pred EccCCCEEeecccccceeecc-----------------------------------------------------------
Confidence 999999999999998543111
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC---CCCccCcchhHHHHHHHhhc---C
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvil~ell~---p 268 (879)
+..+...|-+.|||||.+.-. .|+.++||||||+.|+||.| |
T Consensus 246 --------------------------------kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yP 293 (391)
T KOG0983|consen 246 --------------------------------KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYP 293 (391)
T ss_pred --------------------------------cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCC
Confidence 022345788999999998643 49999999999999999999 9
Q ss_pred CCCChhhHhHHhhhcccCCCchh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
|.........+..+..... |.+ ...++.+.+|+..||.+|+.+||...++|+|||+...
T Consensus 294 y~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 294 YKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred CCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 9887777777777666433 332 2367899999999999999999999999999999754
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=267.56 Aligned_cols=199 Identities=18% Similarity=0.156 Sum_probs=152.3
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
.+|++++..+. .+.. ....|+||||+.|++|.+++... ..+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 54 ~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~-~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil 129 (279)
T cd05633 54 GDCPFIVCMTY-AFHT--PDKLCFILDLMNGGDLHYHLSQH-GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANIL 129 (279)
T ss_pred CCCCcEeEEEE-EEec--CCeEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEE
Confidence 46677765544 3322 34679999999999999998654 46899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.++++|||++......
T Consensus 130 ~~~~~~~~l~dfg~~~~~~~~----------------------------------------------------------- 150 (279)
T cd05633 130 LDEHGHVRISDLGLACDFSKK----------------------------------------------------------- 150 (279)
T ss_pred ECCCCCEEEccCCcceecccc-----------------------------------------------------------
Confidence 999999999999998543110
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc---CCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......||..|+|||.+.+ ..++.++|||||||+||||++ ||.
T Consensus 151 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 197 (279)
T cd05633 151 ---------------------------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFR 197 (279)
T ss_pred ---------------------------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcC
Confidence 0011367899999999864 558999999999999999999 775
Q ss_pred CChhhH-hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 271 TGEEKT-RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
...... ..............+...++.+.++|.+||..||++|| ++.++++||||+...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 198 QHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 332111 11111111111122234567889999999999999999 699999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=269.70 Aligned_cols=204 Identities=16% Similarity=0.170 Sum_probs=156.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ....|++|||+.|++|.+++.. ....+++.+++.++.|++.||.|||++||+|||||
T Consensus 53 il~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dik 129 (285)
T cd05630 53 ILEKVNSRFVVSLAY-AYET--KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLK 129 (285)
T ss_pred HHHhCCCCCeeeeeE-EEec--CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCC
Confidence 445567777776655 3333 3468999999999999998843 33468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.......
T Consensus 130 p~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------------- 156 (285)
T cd05630 130 PENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------------- 156 (285)
T ss_pred HHHEEECCCCCEEEeeccceeecCCCc-----------------------------------------------------
Confidence 999999999999999999885421100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+||..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 198 (285)
T cd05630 157 --------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 198 (285)
T ss_pred --------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCC
Confidence 0012368999999999999889999999999999999999
Q ss_pred -CCCCChhhH--hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCC
Q 002801 268 -PFSTGEEKT--RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (879)
Q Consensus 268 -pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~ 328 (879)
||....... ..................++.+.+|+.+||+.||.+||| +.|+++||||...
T Consensus 199 ~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 199 SPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred CCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 775432211 111111111111222345677899999999999999999 8999999999864
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-26 Score=258.99 Aligned_cols=321 Identities=16% Similarity=0.190 Sum_probs=216.2
Q ss_pred EeecCcEEEEEeccccccCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEe
Q 002801 548 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626 (879)
Q Consensus 548 w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg-~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~ 626 (879)
|+.. +..++. +..|+..|..++.+++. .+|+||+.||+||+|+.....................+.+.++...
T Consensus 1034 W~p~-G~lVAh-----L~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~ 1107 (1431)
T KOG1240|consen 1034 WNPR-GILVAH-----LHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMC 1107 (1431)
T ss_pred CCcc-ceEeeh-----hhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEec
Confidence 6543 444444 45788888899998754 9999999999999999987544322222222333367788999888
Q ss_pred CCCCCeEEEeeCCCcEEEEEcCCCe-------EEEEeccC--CCcEEEEEEecCCCC-EEEEEeCCCcEEEEeCCCCceE
Q 002801 627 SYIKSQIASSNFEGVVQVWDVSRSQ-------VLTEMREH--ERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 627 ~~~~~~l~s~~~dg~V~vwd~~~~~-------~~~~~~~h--~~~v~sv~~sp~~~~-~lasgs~Dg~V~iwd~~~~~~i 696 (879)
+. ++.+|.++.||.|.+.+++... +....+.+ ..-|..-+|...... .++.+..-+.|..||+++...+
T Consensus 1108 ~~-~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~ 1186 (1431)
T KOG1240|consen 1108 GN-GDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDA 1186 (1431)
T ss_pred cC-CCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhH
Confidence 74 8899999999999999987521 12222222 233444455544555 7888888899999999998887
Q ss_pred EEEec---CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEc-cCCCCEEEEEEc--CC--CEEEEEE--cC
Q 002801 697 GTIKT---KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI-GHNKTVSYVKFV--DA--TTLVSAS--TD 766 (879)
Q Consensus 697 ~~~~~---~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~-~h~~~V~~v~fs--~~--~~l~s~s--~D 766 (879)
.+++. ++-|++++.+|. +++++.|+..|.+.+||+|=.. ++.... .+..++..+..+ .+ ...++++ ..
T Consensus 1187 w~lk~~~~hG~vTSi~idp~-~~WlviGts~G~l~lWDLRF~~-~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~ 1264 (1431)
T KOG1240|consen 1187 WRLKNQLRHGLVTSIVIDPW-CNWLVIGTSRGQLVLWDLRFRV-PILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSN 1264 (1431)
T ss_pred HhhhcCccccceeEEEecCC-ceEEEEecCCceEEEEEeecCc-eeecccCcccCCcceEEeeccCCCCceEEEecccCC
Confidence 77764 677999999999 8899999999999999999766 355443 556777777665 33 4555544 46
Q ss_pred CcEEEEecCCCcccc---c--CCceEEE-e-------CCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCce-ecc
Q 002801 767 NTLKLWDLSMCTSRV---I--DTPLHSF-T-------GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPAL-SFN 832 (879)
Q Consensus 767 ~~i~lwd~~~~~~~~---~--~~~~~~~-~-------~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~-~~~ 832 (879)
+.|.+|++.++..+. . ..+..+. . .+.-.....++...+.++.+|+.|..|+.||...++... .+.
T Consensus 1265 nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~ 1344 (1431)
T KOG1240|consen 1265 NEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVP 1344 (1431)
T ss_pred CceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCccccccccc
Confidence 889999999874320 0 0010000 0 122233344555556799999999999999987665440 000
Q ss_pred cC----------------CCC------------------------CCCCCC--CCCCCCCEEEEEEeCCCCcEEEEEeCC
Q 002801 833 FN----------------HAD------------------------PLSGPE--TDDAAQFISSVCWRGQSSNTLVAANSS 870 (879)
Q Consensus 833 ~~----------------~~~------------------------~~~~~~--~~~h~~~V~~v~~~p~~~~~l~s~~~D 870 (879)
-+ +.. ...+.. ...|..+|+++++-.....+|++++.|
T Consensus 1345 ~~s~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~d 1424 (1431)
T KOG1240|consen 1345 GPSTSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRD 1424 (1431)
T ss_pred CccccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCC
Confidence 00 000 000111 145788999998875544389999999
Q ss_pred CcEEEEE
Q 002801 871 GNIKILE 877 (879)
Q Consensus 871 g~I~vw~ 877 (879)
|.|+||.
T Consensus 1425 G~IkiWk 1431 (1431)
T KOG1240|consen 1425 GVIKIWK 1431 (1431)
T ss_pred CeeeecC
Confidence 9999994
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=251.80 Aligned_cols=208 Identities=18% Similarity=0.204 Sum_probs=151.2
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc----CCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~----~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
-..|+|++.... +.-.. ...++++.||.+ -+|.+.|+ ...+.++...++.|+.||+.||.|||+.=|+|||||
T Consensus 83 El~h~nvi~Lv~-Vfl~~-d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLK 159 (438)
T KOG0666|consen 83 ELKHPNVISLVK-VFLSH-DKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLK 159 (438)
T ss_pred HhcCCcchhHHH-HHhcc-CceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCC
Confidence 345555554433 33322 456899999995 48888883 223578999999999999999999999999999999
Q ss_pred CcceeeccC----CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 110 PSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 110 P~NIll~~~----~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|+|||+..+ |.|||+|+|+++.+..+-.. +
T Consensus 160 PaNIlvmgdgperG~VKIaDlGlaR~~~~plkp--l-------------------------------------------- 193 (438)
T KOG0666|consen 160 PANILVMGDGPERGRVKIADLGLARLFNNPLKP--L-------------------------------------------- 193 (438)
T ss_pred cceEEEeccCCccCeeEeecccHHHHhhccccc--c--------------------------------------------
Confidence 999999876 89999999999986433100 0
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~e 264 (879)
. .....+-|.||+|||.+.|.. |+.+.|||++|||+.|
T Consensus 194 ----~-------------------------------------s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE 232 (438)
T KOG0666|consen 194 ----A-------------------------------------SLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE 232 (438)
T ss_pred ----c-------------------------------------cCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence 0 002247799999999999977 9999999999999999
Q ss_pred hhc--CCCCChhhH-------------hHHhhhcc------------------------cCCCc--------hhhccChh
Q 002801 265 LFC--PFSTGEEKT-------------RTMSSLRH------------------------RVLPP--------QLLLKFPK 297 (879)
Q Consensus 265 ll~--pf~~~~~~~-------------~~~~~~~~------------------------~~~~~--------~~~~~~~~ 297 (879)
|++ |.+.+.+.. +.+..+.. ....+ .....++.
T Consensus 233 lLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~ 312 (438)
T KOG0666|consen 233 LLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPS 312 (438)
T ss_pred HHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCch
Confidence 999 654432211 11111111 00000 01113445
Q ss_pred hHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 298 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
..+|+.+||..||-+|+|++++|+|+||.....+
T Consensus 313 a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 313 ALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 7799999999999999999999999999976444
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=266.19 Aligned_cols=200 Identities=17% Similarity=0.209 Sum_probs=154.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .....|++|||+++++|.+++... +.+++.+++.++.||+.||+|||++||+|+||||
T Consensus 59 ~~~~l~h~~ii~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp 134 (267)
T cd06645 59 MMKDCKHSNIVAYFG-SYL--RRDKLWICMEFCGGGSLQDIYHVT-GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKG 134 (267)
T ss_pred HHHhCCCCCeeeEEE-EEE--eCCEEEEEEeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 344567888888776 332 234679999999999999998654 4789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 135 ~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 161 (267)
T cd06645 135 ANILLTDNGHVKLADFGVSAQITATIA----------------------------------------------------- 161 (267)
T ss_pred HHEEECCCCCEEECcceeeeEccCccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||.+. ...++.++|||||||++|||++
T Consensus 162 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~ 204 (267)
T cd06645 162 -------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAE 204 (267)
T ss_pred -------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhc
Confidence 001246899999999984 4558899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
||..................++.. ...+..+.+++.+||..+|++||+++++++|||
T Consensus 205 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 205 LQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred CCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 765443332222222222222221 234567889999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=273.71 Aligned_cols=211 Identities=18% Similarity=0.166 Sum_probs=153.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+...+|++++..++ ++.++ ...|+||||+++++|.+++... ...+++..++.++.||+.||+|||++||+||||||
T Consensus 53 l~~l~hpniv~~~~-~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp 129 (327)
T cd08227 53 SKLFNHPNIVPYRA-TFIAD--NELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKA 129 (327)
T ss_pred HHhcCCCCeeeEEE-EEEEC--CEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCh
Confidence 34457888888766 55433 4679999999999999999543 34589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.++++||+.+......... .
T Consensus 130 ~Nil~~~~~~~~l~~~~~~~~~~~~~~~--~------------------------------------------------- 158 (327)
T cd08227 130 SHILISVDGKVYLSGLRSNLSMINHGQR--L------------------------------------------------- 158 (327)
T ss_pred hhEEEecCCcEEEcccchhhcccccccc--c-------------------------------------------------
Confidence 9999999999999999876432110000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCcchhHHHHHHHhhc-
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDIwSlGvil~ell~- 267 (879)
+. ...+ .....++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 159 ----------------~~-------------~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g 206 (327)
T cd08227 159 ----------------RV-------------VHDF---PKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 206 (327)
T ss_pred ----------------cc-------------cccc---cccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHC
Confidence 00 0000 011256778999999976 458999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCC--------------------------------------------CchhhccChhhHHH
Q 002801 268 --PFSTGEEKTRTMSSLRHRVL--------------------------------------------PPQLLLKFPKEASF 301 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~l 301 (879)
||............+..... .+.....++.+.+|
T Consensus 207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (327)
T cd08227 207 HVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHF 286 (327)
T ss_pred CCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHH
Confidence 77543322222211111000 00111234678899
Q ss_pred HHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 302 CLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 302 i~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
+.+||+.||++|||++|+++||||+..
T Consensus 287 i~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 287 VEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred HHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 999999999999999999999999764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=260.27 Aligned_cols=190 Identities=17% Similarity=0.177 Sum_probs=152.3
Q ss_pred ccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecc
Q 002801 49 ENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 127 (879)
Q Consensus 49 ~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg 127 (879)
..+....+++||..|.||+|.-+|-. ...-+++..++.|+.+|+.||++||.++||.|||||+|||||..|+++|.|.|
T Consensus 253 AfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 253 AFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred eecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccc
Confidence 45677789999999999999998844 33469999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecccccccc
Q 002801 128 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 207 (879)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (879)
+|-.+....
T Consensus 333 LAvei~~g~----------------------------------------------------------------------- 341 (591)
T KOG0986|consen 333 LAVEIPEGK----------------------------------------------------------------------- 341 (591)
T ss_pred eEEecCCCC-----------------------------------------------------------------------
Confidence 997642110
Q ss_pred ccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhH---Hhh
Q 002801 208 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRT---MSS 281 (879)
Q Consensus 208 ~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~---~~~ 281 (879)
.....+||..|||||++..+.|+++.|+|||||+||||+. ||....+.... ...
T Consensus 342 --------------------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr 401 (591)
T KOG0986|consen 342 --------------------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR 401 (591)
T ss_pred --------------------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH
Confidence 0123489999999999999999999999999999999998 88544332221 111
Q ss_pred hcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCcC
Q 002801 282 LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (879)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~~ 330 (879)
+... ........++++++++..+|++||.+|.. +.++.+||||+.+..
T Consensus 402 ~~~~-~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 402 TLED-PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred Hhcc-hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 1111 11122345688999999999999999964 679999999997543
|
|
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=265.39 Aligned_cols=207 Identities=15% Similarity=0.153 Sum_probs=160.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .|.+. ...|++|||+.|++|.+++.+. .++++..+..++.||+.||+|||+.||+|+||||
T Consensus 55 ~l~~l~~~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p 130 (265)
T cd06631 55 LLKSLKHVNIVQYLG-TCLDD--NTISIFMEFVPGGSISSILNRF-GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKG 130 (265)
T ss_pred HHHhcCCCCEeeEee-EeecC--CeEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCH
Confidence 455667888877666 55443 5689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||+++...........
T Consensus 131 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------------------------------------------------- 161 (265)
T cd06631 131 NNVMLMPNGIIKLIDFGCARRLAWVGLHGTH------------------------------------------------- 161 (265)
T ss_pred HhEEECCCCeEEeccchhhHhhhhccccccc-------------------------------------------------
Confidence 9999999999999999998653211000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
........|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 -----------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~ 206 (265)
T cd06631 162 -----------------------------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKP 206 (265)
T ss_pred -----------------------------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCC
Confidence 000012367999999999998889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc-cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||............... ...++........+.++|.+||.++|.+||++.++++||||
T Consensus 207 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 207 PLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred ccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 77554433333222222 23344444566788999999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-29 Score=265.29 Aligned_cols=193 Identities=20% Similarity=0.235 Sum_probs=153.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ .+.+ ....|+||||++|++|.++++.. ..+++.+++.++.||+.||.|||+.||+||||||+||++
T Consensus 67 ~h~~iv~~~~-~~~~--~~~~~iv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~ 142 (267)
T PHA03390 67 DNPNFIKLYY-SVTT--LKGHVLIMDYIKDGDLFDLLKKE-GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY 142 (267)
T ss_pred cCCCEEEEEE-EEec--CCeeEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE
Confidence 6777777666 3333 23689999999999999999665 378999999999999999999999999999999999999
Q ss_pred ccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 116 SSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 116 ~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
+.++ .++++|||+++.....
T Consensus 143 ~~~~~~~~l~dfg~~~~~~~~----------------------------------------------------------- 163 (267)
T PHA03390 143 DRAKDRIYLCDYGLCKIIGTP----------------------------------------------------------- 163 (267)
T ss_pred eCCCCeEEEecCccceecCCC-----------------------------------------------------------
Confidence 9888 9999999988543111
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
....|+..|+|||++.+..++.++|||||||++|||++ ||..
T Consensus 164 -----------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 208 (267)
T PHA03390 164 -----------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKE 208 (267)
T ss_pred -----------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 11256888999999998889999999999999999999 7754
Q ss_pred ChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCCC-HHHHhhccccc
Q 002801 272 GEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLN 326 (879)
Q Consensus 272 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-~~evl~hp~~~ 326 (879)
..........+.. ....+.+...++.+.+||.+||+++|.+||+ ++++|+||||.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 209 DEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred CCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 3222111111111 1222333457788999999999999999996 69999999996
|
|
| >KOG0269 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=264.96 Aligned_cols=287 Identities=22% Similarity=0.352 Sum_probs=231.5
Q ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC
Q 002801 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (879)
Q Consensus 570 ~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~ 649 (879)
..++|+..++-..++.+|.. .++|+.++.......-.++-.....-...+..|.|+....++||+++..|.|.+||+..
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk 119 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK 119 (839)
T ss_pred ccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence 34566777888888888875 88898887532221111110000112235678899988899999999999999999987
Q ss_pred ---CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC-ceEEEEeeCCCCCEEEEEeCCC
Q 002801 650 ---SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NVCCVQFPLDSGRSLAFGSADH 725 (879)
Q Consensus 650 ---~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~-~v~~v~~~p~~~~~l~tgs~d~ 725 (879)
.+.+..|.+|+..|++++|++..+++|+|||.||+|++||++..+...++...+ .|..|+|+|..++.|+++...|
T Consensus 120 ~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG 199 (839)
T KOG0269|consen 120 SIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSG 199 (839)
T ss_pred cccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCc
Confidence 566678899999999999999999999999999999999999999888887654 4999999999999999999999
Q ss_pred eEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecC
Q 002801 726 RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVW 804 (879)
Q Consensus 726 ~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~ 804 (879)
.+.+||+|.+..+...+.+|.++|.++.|+ ++.+||||+.|+.|+|||+..... .++.++. -..+|..|.|-|.
T Consensus 200 ~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~----~~~~tIn-Tiapv~rVkWRP~ 274 (839)
T KOG0269|consen 200 YLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA----KPKHTIN-TIAPVGRVKWRPA 274 (839)
T ss_pred eEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc----cceeEEe-ecceeeeeeeccC
Confidence 999999999998888999999999999999 999999999999999999987532 4555554 3568999999998
Q ss_pred CC-EEEEEeC--CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEE
Q 002801 805 DG-YVATGSE--TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIK 874 (879)
Q Consensus 805 ~~-~lasgs~--Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~ 874 (879)
.. .||+++. |-.|+|||+..+-. .-..+..|...|+.++|.....-.|.+++.||+|.
T Consensus 275 ~~~hLAtcsmv~dtsV~VWDvrRPYI------------P~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~ 335 (839)
T KOG0269|consen 275 RSYHLATCSMVVDTSVHVWDVRRPYI------------PYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVL 335 (839)
T ss_pred ccchhhhhhccccceEEEEeeccccc------------cceeeeccCccccceeccCCCceeeEeecCccHHH
Confidence 76 6787774 78899999986422 11234678899999999863333799999999864
|
|
| >KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-26 Score=234.81 Aligned_cols=283 Identities=14% Similarity=0.230 Sum_probs=234.2
Q ss_pred cccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcE
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V 642 (879)
.+..|++.|++|+.+|+..++||||.|..-.||+..++. .+.....|+..|+|+.|+. ++.+||+|+.+|.|
T Consensus 59 tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge-------~~~eltgHKDSVt~~~Fsh-dgtlLATGdmsG~v 130 (399)
T KOG0296|consen 59 TFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE-------FAGELTGHKDSVTCCSFSH-DGTLLATGDMSGKV 130 (399)
T ss_pred ehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc-------ceeEecCCCCceEEEEEcc-CceEEEecCCCccE
Confidence 345899999999999999999999999999999998642 2344457999999999998 59999999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEE
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tg 721 (879)
.||+..++.....+..--..|.-+.|+| .+..|+.|+.||.|.+|.+.++...+.+.. ..+++|=.|.|+ |+.+++|
T Consensus 131 ~v~~~stg~~~~~~~~e~~dieWl~WHp-~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pd-GKr~~tg 208 (399)
T KOG0296|consen 131 LVFKVSTGGEQWKLDQEVEDIEWLKWHP-RAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPD-GKRILTG 208 (399)
T ss_pred EEEEcccCceEEEeecccCceEEEEecc-cccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCC-CceEEEE
Confidence 9999999988877765556778899999 899999999999999999998766666664 567999999999 9999999
Q ss_pred eCCCeEEEEEcCCCceeeEEEcc-CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEe--------C
Q 002801 722 SADHRIYYYDLRNSKIPLCTLIG-HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT--------G 791 (879)
Q Consensus 722 s~d~~I~iwDl~~~~~~~~~~~~-h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~--------~ 791 (879)
..||+|++||+.++. |+..+.+ ......++.++ .+..+++|+.++.+++-+..+++ .+.... .
T Consensus 209 y~dgti~~Wn~ktg~-p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgK------Vv~~~n~~~~~l~~~ 281 (399)
T KOG0296|consen 209 YDDGTIIVWNPKTGQ-PLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGK------VVNCNNGTVPELKPS 281 (399)
T ss_pred ecCceEEEEecCCCc-eeEEecccccCcCCccccccccceeEeccCCccEEEEccccce------EEEecCCCCcccccc
Confidence 999999999999998 4666653 33456788888 89999999999999988877763 333333 3
Q ss_pred CCCcEEEEEEecC---CCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEe
Q 002801 792 HTNVKNFVGLSVW---DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAAN 868 (879)
Q Consensus 792 h~~~v~~v~~sp~---~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~ 868 (879)
+...+.+|.+.|. =...|||+-||+|.|||+...++.... .|...|..+.|-+ .. +|+||+
T Consensus 282 ~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c--------------~he~~V~~l~w~~-t~-~l~t~c 345 (399)
T KOG0296|consen 282 QEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC--------------EHEDGVTKLKWLN-TD-YLLTAC 345 (399)
T ss_pred chhhhhhhhhcccccccchhhcccccceEEEEecccchhheec--------------cCCCceEEEEEcC-cc-hheeec
Confidence 5555666665554 458899999999999999876543322 3566799999998 66 899999
Q ss_pred CCCcEEEEEe
Q 002801 869 SSGNIKILEM 878 (879)
Q Consensus 869 ~Dg~I~vw~l 878 (879)
.||.|++||.
T Consensus 346 ~~g~v~~wDa 355 (399)
T KOG0296|consen 346 ANGKVRQWDA 355 (399)
T ss_pred cCceEEeeec
Confidence 9999999984
|
|
| >KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-28 Score=244.27 Aligned_cols=281 Identities=17% Similarity=0.257 Sum_probs=233.1
Q ss_pred ccccCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCC
Q 002801 562 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (879)
Q Consensus 562 ~~l~~h~~~V~~l~fspdg-~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg 640 (879)
+.|.||.++|.|++=+|.. ..+|+|+.||.|+|||+..... ......|.+.|..|++.. ..+++++.|.
T Consensus 60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~-------~~~f~AH~G~V~Gi~v~~---~~~~tvgdDK 129 (433)
T KOG0268|consen 60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQREC-------IRTFKAHEGLVRGICVTQ---TSFFTVGDDK 129 (433)
T ss_pred hhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhh-------hheeecccCceeeEEecc---cceEEecCCc
Confidence 4456999999999999976 7899999999999999986322 223345888999999974 6788889999
Q ss_pred cEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCC-ceEEEEeeCCCCCEEE
Q 002801 641 VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NVCCVQFPLDSGRSLA 719 (879)
Q Consensus 641 ~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~-~v~~v~~~p~~~~~l~ 719 (879)
+|+.|.++- .++.++. ....+..++-+. ..+.+|||+.+ |.|||..-..++.++..+. .|.++.|+|.....|+
T Consensus 130 tvK~wk~~~-~p~~til-g~s~~~gIdh~~-~~~~FaTcGe~--i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILa 204 (433)
T KOG0268|consen 130 TVKQWKIDG-PPLHTIL-GKSVYLGIDHHR-KNSVFATCGEQ--IDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILA 204 (433)
T ss_pred ceeeeeccC-Ccceeee-cccccccccccc-ccccccccCce--eeecccccCCccceeecCCCceeEEecCCCcchhee
Confidence 999999874 4555553 345677777776 67899999875 9999999999999998754 4999999999888999
Q ss_pred EEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEE
Q 002801 720 FGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 798 (879)
Q Consensus 720 tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~ 798 (879)
+|..|+.|.+||+|+... +.... -...-+.|+|+ ..-.+++|+.|..++.||++.. ..++..+.+|.+.|.+
T Consensus 205 s~~sDrsIvLyD~R~~~P-l~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l-----~~p~~v~~dhvsAV~d 277 (433)
T KOG0268|consen 205 SCASDRSIVLYDLRQASP-LKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNL-----SRPLNVHKDHVSAVMD 277 (433)
T ss_pred eeccCCceEEEecccCCc-cceee-eeccccceecCccccceeeccccccceehhhhhh-----cccchhhcccceeEEE
Confidence 999999999999999884 44432 23445789999 7777889999999999999997 4789999999999999
Q ss_pred EEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 799 VGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 799 v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|+|||.|+-+++||.|.+|+||....+..-..+. ..-.+.|.+|.|+-|+. ++++|+.|++|++|.
T Consensus 278 VdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYh------------tkRMq~V~~Vk~S~Dsk-yi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 278 VDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYH------------TKRMQHVFCVKYSMDSK-YIISGSDDGNVRLWK 343 (433)
T ss_pred eccCCCcchhccccccceEEEeecCCCcchhhhh------------HhhhheeeEEEEecccc-EEEecCCCcceeeee
Confidence 9999999999999999999999988654332221 12246799999999999 999999999999996
|
|
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=272.33 Aligned_cols=221 Identities=20% Similarity=0.207 Sum_probs=161.5
Q ss_pred cccccccccCCCCC----cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCC-CCCh
Q 002801 7 RGERFGVRGDDSND----FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKR-SVDV 81 (879)
Q Consensus 7 ~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~-~l~~ 81 (879)
+|..++|+...... ..|..| +..+++.+|+|+|.+++ +|.+... .++||+||+.+|+|.++|..... +++|
T Consensus 98 ~~~~vAVK~~~~~~~~~~~eF~~E--i~~ls~l~H~Nlv~LlG-yC~e~~~-~~~LVYEym~nGsL~d~L~~~~~~~L~W 173 (361)
T KOG1187|consen 98 DGTVVAVKRLSSNSGQGEREFLNE--VEILSRLRHPNLVKLLG-YCLEGGE-HRLLVYEYMPNGSLEDHLHGKKGEPLDW 173 (361)
T ss_pred CCCEEEEEEecCCCCcchhHHHHH--HHHHhcCCCcCcccEEE-EEecCCc-eEEEEEEccCCCCHHHHhCCCCCCCCCH
Confidence 34567776433322 234444 44566777999988877 7775543 68999999999999999966555 8999
Q ss_pred hHHHHHHHHHHHHHHhhhhcC---cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcch
Q 002801 82 YECLHIFRQIVEIVYAAHSQG---IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (879)
Q Consensus 82 ~~~~~i~~qi~~~l~~lHs~g---ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (879)
...++|+.+++.||+|||... ||||||||+|||||.+.++|++|||+|+..... ..
T Consensus 174 ~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~-~~-------------------- 232 (361)
T KOG1187|consen 174 ETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG-DT-------------------- 232 (361)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc-cc--------------------
Confidence 999999999999999999854 999999999999999999999999999653210 00
Q ss_pred hhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCcccccc-ccccc
Q 002801 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILL-METNW 237 (879)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~gt~~ 237 (879)
..... .||..
T Consensus 233 ---------------------------------------------------------------------~~~~~~~gt~g 243 (361)
T KOG1187|consen 233 ---------------------------------------------------------------------SVSTTVMGTFG 243 (361)
T ss_pred ---------------------------------------------------------------------ceeeecCCCCc
Confidence 00112 78999
Q ss_pred eeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh----h--hHhHHhhhccc----CCCchhh-c------cChh
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE----E--KTRTMSSLRHR----VLPPQLL-L------KFPK 297 (879)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~----~--~~~~~~~~~~~----~~~~~~~-~------~~~~ 297 (879)
|+|||.+..+..+.++|||||||+|.||++ +..... . .......+... ...|... . ....
T Consensus 244 Y~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~ 323 (361)
T KOG1187|consen 244 YLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKK 323 (361)
T ss_pred cCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHH
Confidence 999999998889999999999999999999 333211 1 11111122221 1222221 1 2233
Q ss_pred hHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 298 EASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+..+..+|++.+|..||+|.||++
T Consensus 324 ~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 324 LAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHHHHHHcCcCCCcCcCHHHHHH
Confidence 568889999999999999999754
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=264.33 Aligned_cols=199 Identities=15% Similarity=0.142 Sum_probs=150.8
Q ss_pred ccccCCCCCCccccc----ccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 36 DHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~----~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+|++++..++ .+.. +.....|++|||+.+++|.+++... ...+++..++.++.||+.||+|||++||+|+||||
T Consensus 71 ~h~~i~~~~~-~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~ 149 (282)
T cd06636 71 HHRNIATYYG-AFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKG 149 (282)
T ss_pred CCCcEEEEee-ehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 5777776655 3321 2245679999999999999998542 34588899999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||++........
T Consensus 150 ~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 176 (282)
T cd06636 150 QNVLLTENAEVKLVDFGVSAQLDRTVG----------------------------------------------------- 176 (282)
T ss_pred HHEEECCCCCEEEeeCcchhhhhcccc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|+..|+|||.+. +..++.++|||||||++|||
T Consensus 177 -------------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el 219 (282)
T cd06636 177 -------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEM 219 (282)
T ss_pred -------------------------------------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHH
Confidence 001236788999999986 34588899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
++ ||.........................++.+.+||.+||..||.+||++.|+++||||
T Consensus 220 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 220 AEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred HhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 99 7754433222222111111111222456788999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-29 Score=251.65 Aligned_cols=201 Identities=12% Similarity=0.153 Sum_probs=159.1
Q ss_pred cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeec
Q 002801 37 HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 116 (879)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~ 116 (879)
-+-+|..|+.++ ...+++||||||..|++.+.++..+.+|.+.++..|++..+.||+|||...-||||||..||||+
T Consensus 87 S~yVVKYYGSYF---K~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN 163 (502)
T KOG0574|consen 87 SKYVVKYYGSYF---KHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN 163 (502)
T ss_pred Cchhhhhhhhhc---cCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc
Confidence 344455555333 24578999999999999999988878999999999999999999999999999999999999999
Q ss_pred cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcc
Q 002801 117 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 196 (879)
Q Consensus 117 ~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (879)
-+|++|++|||+|-++... +
T Consensus 164 T~G~AKLADFGVAGQLTDT-----M------------------------------------------------------- 183 (502)
T KOG0574|consen 164 TDGIAKLADFGVAGQLTDT-----M------------------------------------------------------- 183 (502)
T ss_pred ccchhhhhhccccchhhhh-----H-------------------------------------------------------
Confidence 9999999999999664211 1
Q ss_pred eeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh
Q 002801 197 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 273 (879)
Q Consensus 197 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~ 273 (879)
.+....+|||.|||||++..-.|++++||||||++..||.. ||....
T Consensus 184 ------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIH 233 (502)
T KOG0574|consen 184 ------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIH 233 (502)
T ss_pred ------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccc
Confidence 02345799999999999999999999999999999999998 553322
Q ss_pred hhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 274 EKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 274 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
..+++..+.....| ..+...+.++.+|+++||.+.|++|-|+-++++|||++.....
T Consensus 234 -PMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~ 292 (502)
T KOG0574|consen 234 -PMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC 292 (502)
T ss_pred -ccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence 22222222222111 1223345678899999999999999999999999999876543
|
|
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=263.14 Aligned_cols=206 Identities=17% Similarity=0.147 Sum_probs=157.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+.....+|++|||++|++|.+++.+. ..+++..++.++.||+.||.|||++||+|+||||
T Consensus 57 ~l~~l~h~~i~~~~~-~~~~~~~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p 134 (265)
T cd06652 57 LLKNLLHERIVQYYG-CLRDPMERTLSIFMEHMPGGSIKDQLKSY-GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKG 134 (265)
T ss_pred HHHhcCCCCeeeEEe-EeccCCCceEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCH
Confidence 445567888877666 34444445678999999999999999654 4589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||+++.........
T Consensus 135 ~nil~~~~~~~~l~Dfg~~~~~~~~~~~~--------------------------------------------------- 163 (265)
T cd06652 135 ANILRDSVGNVKLGDFGASKRLQTICLSG--------------------------------------------------- 163 (265)
T ss_pred HHEEecCCCCEEECcCccccccccccccc---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 207 (265)
T cd06652 164 ------------------------------------TGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKP 207 (265)
T ss_pred ------------------------------------cccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCC
Confidence 00012367889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
||..................+..+......+.+++.+||. +|++||+++++++|||++
T Consensus 208 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 208 PWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred CCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 7754433333333332222233333455678899999995 999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=269.60 Aligned_cols=236 Identities=17% Similarity=0.175 Sum_probs=165.6
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
..+.+..|++++..++ .+.+ ....|++|||+.|++|.+++.+. ...+++..++.++.||+.||+|||+.||+|+||
T Consensus 53 ~~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl 129 (316)
T cd05574 53 EILATLDHPFLPTLYA-SFQT--ETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDL 129 (316)
T ss_pred HHHHhCCCCCchhhee-eeec--CCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 3445566888877766 4432 44689999999999999999543 357899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++|+|||++........... ... .. .+. . .
T Consensus 130 kp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~---~~~-----------------------~~--~~~-------~---~ 171 (316)
T cd05574 130 KPENILLHESGHIMLSDFDLSKQSDVEPPPVS---KAL-----------------------RK--GSR-------R---S 171 (316)
T ss_pred ChHHeEEcCCCCEEEeecchhhcccccccccc---ccc-----------------------cc--ccc-------c---c
Confidence 99999999999999999999876432210000 000 00 000 0 0
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
+........ ... .........+||..|+|||++.+..++.++|||||||++|+|++
T Consensus 172 ~~~~~~~~~--------------------~~~---~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g 228 (316)
T cd05574 172 SVNSIPSET--------------------FSE---EPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYG 228 (316)
T ss_pred cccccchhh--------------------hcc---cccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhC
Confidence 000000000 000 00001123588999999999998889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC----HHHHhhcccccCCc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~evl~hp~~~~~~ 329 (879)
||...................+.....++.+.+++.+||..||++||+ ++++++||||+...
T Consensus 229 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~ 296 (316)
T cd05574 229 TTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN 296 (316)
T ss_pred CCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence 776554443333333333222333335678999999999999999999 99999999998754
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-28 Score=262.66 Aligned_cols=206 Identities=16% Similarity=0.172 Sum_probs=160.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ....|++|||+++++|.++++.. +.+++..+..++.||+.||+|||++||+||||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p 134 (267)
T cd06628 59 LLKELQHENIVQYLG-SSLD--ADHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKG 134 (267)
T ss_pred HHHhcCCCCeeeEEE-EEEe--CCccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCH
Confidence 455567888877666 4433 44789999999999999999654 5689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||.++...........
T Consensus 135 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------------------------------------------------- 165 (267)
T cd06628 135 ANILVDNKGGIKISDFGISKKLEANSLSTKT------------------------------------------------- 165 (267)
T ss_pred HHEEEcCCCCEEecccCCCcccccccccCCc-------------------------------------------------
Confidence 9999999999999999999764221000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
........|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 -----------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~ 210 (267)
T cd06628 166 -----------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKH 210 (267)
T ss_pred -----------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCC
Confidence 000112467889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||........ ...+.....+......+..+.+++.+||++||.+||++.++++||||
T Consensus 211 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 211 PFPDCTQLQA-IFKIGENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCCCccHHHH-HHHHhccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 7765443332 22333333344444566788999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-26 Score=257.84 Aligned_cols=274 Identities=13% Similarity=0.225 Sum_probs=209.0
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCc------CcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE------NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 568 ~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~------~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
-..|+....++|+..+++++.+.....|+...+... ......+....+|.+.|.+++|+|.++++|++|+.||+
T Consensus 20 ~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dgt 99 (493)
T PTZ00421 20 FLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGT 99 (493)
T ss_pred eeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCE
Confidence 345556666777666777777777777765432110 00011122345789999999999976889999999999
Q ss_pred EEEEEcCCC-------eEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCC
Q 002801 642 VQVWDVSRS-------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLD 713 (879)
Q Consensus 642 V~vwd~~~~-------~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~ 713 (879)
|++||+.++ +++..+.+|...|.+++|+|...++|++|+.|++|+|||+++++.+..+.. ...|.+++|+|+
T Consensus 100 IkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spd 179 (493)
T PTZ00421 100 IMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLD 179 (493)
T ss_pred EEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECC
Confidence 999999765 356778899999999999994457999999999999999999998888874 567999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCC-EEEEEEc-CCCEEEEEE----cCCcEEEEecCCCcccccCCceE
Q 002801 714 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKT-VSYVKFV-DATTLVSAS----TDNTLKLWDLSMCTSRVIDTPLH 787 (879)
Q Consensus 714 ~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~-V~~v~fs-~~~~l~s~s----~D~~i~lwd~~~~~~~~~~~~~~ 787 (879)
+.+|++|+.|+.|++||+++++. +..+.+|... +..+.|. ++..+++++ .|++|++||+++.. .++.
T Consensus 180 -G~lLatgs~Dg~IrIwD~rsg~~-v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~-----~p~~ 252 (493)
T PTZ00421 180 -GSLLCTTSKDKKLNIIDPRDGTI-VSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA-----SPYS 252 (493)
T ss_pred -CCEEEEecCCCEEEEEECCCCcE-EEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC-----Ccee
Confidence 89999999999999999999884 7788888765 4566777 667777654 47999999998763 3444
Q ss_pred EEeCC-CCcEEEEEEecCCCEEEEEe-CCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCC
Q 002801 788 SFTGH-TNVKNFVGLSVWDGYVATGS-ETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQS 860 (879)
Q Consensus 788 ~~~~h-~~~v~~v~~sp~~~~lasgs-~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 860 (879)
....+ ...+....|++++.+|++|| .|+.|++|++..++++....+.. ..++.++||.|.-
T Consensus 253 ~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s------------~~~~~g~~~~pk~ 315 (493)
T PTZ00421 253 TVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSS------------VEPHKGLCMMPKW 315 (493)
T ss_pred EeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccC------------CCCCcceEecccc
Confidence 44433 34566678999999888877 59999999999888776655433 3346677777653
|
|
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=267.23 Aligned_cols=204 Identities=15% Similarity=0.161 Sum_probs=159.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ....|++|||+.|++|.+++.+. .+++.++..++.||+.||+|||++||+|+||||
T Consensus 69 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p 143 (296)
T cd06655 69 VMKELKNPNIVNFLD-SFLV--GDELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKS 143 (296)
T ss_pred HHHhcCCCceeeeee-eEec--CceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 344557777777666 4433 34689999999999999999543 589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++........
T Consensus 144 ~Nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------- 170 (296)
T cd06655 144 DNVLLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------------- 170 (296)
T ss_pred HHEEECCCCCEEEccCccchhcccccc-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 171 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~ 213 (296)
T cd06655 171 -------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213 (296)
T ss_pred -------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0011367889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccC-CCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||................. ........++.+.++|.+||..||.+||++.++++||||+...
T Consensus 214 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 214 PYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred CCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 7765544333222221111 1122334567888999999999999999999999999998644
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-29 Score=269.21 Aligned_cols=207 Identities=17% Similarity=0.261 Sum_probs=159.7
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+....|++++..+. .+. .....|++|||+++++|.+++.. ..+++.++..++.||+.||+|||++||+|||||
T Consensus 71 ~~l~~l~h~~ii~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk 145 (292)
T cd06658 71 VIMRDYHHENVVDMYN-SYL--VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 145 (292)
T ss_pred HHHHhCCCCcHHHHHH-hee--cCCeEEEEEeCCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCC
Confidence 3445567787777666 332 23467999999999999999854 358999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++|+|||++........
T Consensus 146 p~Nill~~~~~~kL~dfg~~~~~~~~~~---------------------------------------------------- 173 (292)
T cd06658 146 SDSILLTSDGRIKLSDFGFCAQVSKEVP---------------------------------------------------- 173 (292)
T ss_pred HHHEEEcCCCCEEEccCcchhhcccccc----------------------------------------------------
Confidence 9999999999999999999864311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 174 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~ 215 (292)
T cd06658 174 --------------------------------------KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 215 (292)
T ss_pred --------------------------------------cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCC
Confidence 0012367899999999988889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCch
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~ 332 (879)
||...... ..+..+.....+ +.....++.+.+++.+||..||.+|||++++++||||.....+.
T Consensus 216 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~ 282 (292)
T cd06658 216 PPYFNEPPL-QAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPS 282 (292)
T ss_pred CCCCCCCHH-HHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCcc
Confidence 77544332 222222222111 12223556788999999999999999999999999999665544
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-28 Score=265.92 Aligned_cols=203 Identities=18% Similarity=0.234 Sum_probs=153.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|+||||+ |++|.+++......+++.+++.++.||+.||.|||++||+|+||||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~~--~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p 127 (286)
T cd07832 52 ALQACQHPYVVKLLD-VFPH--GSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKP 127 (286)
T ss_pred HHHhCCCCCCcceee-EEec--CCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCH
Confidence 344556888887776 4433 45689999999 9999999966557799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++.........
T Consensus 128 ~ni~~~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------------- 155 (286)
T cd07832 128 ANLLISADGVLKIADFGLARLFSEEEPR---------------------------------------------------- 155 (286)
T ss_pred HHEEEcCCCcEEEeeeeecccccCCCCC----------------------------------------------------
Confidence 9999999999999999998664221000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
......|+.+|+|||.+.+.. ++.++|||||||++|||++
T Consensus 156 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~ 198 (286)
T cd07832 156 -------------------------------------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGS 198 (286)
T ss_pred -------------------------------------ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCC
Confidence 001236799999999987654 6999999999999999999
Q ss_pred CCCCChhhHhHHhhhccc---------------------CC--------CchhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 PFSTGEEKTRTMSSLRHR---------------------VL--------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~---------------------~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
|++...........+... .. ..........+.+||.+||..+|.+||++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 278 (286)
T cd07832 199 PLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAE 278 (286)
T ss_pred cCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHH
Confidence 443332221111111000 00 0111234567889999999999999999999
Q ss_pred Hhhccccc
Q 002801 319 LLQSEFLN 326 (879)
Q Consensus 319 vl~hp~~~ 326 (879)
+++||||.
T Consensus 279 ~l~h~~~~ 286 (286)
T cd07832 279 ALRHPYFT 286 (286)
T ss_pred HhhCcCcC
Confidence 99999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-28 Score=262.88 Aligned_cols=201 Identities=13% Similarity=0.118 Sum_probs=156.2
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..++ .+. .....|+||||+++++|.+++.+....+++.+++.++.||+.||+|||++||+|||
T Consensus 56 e~~~l~~l~h~~iv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~d 132 (266)
T cd05064 56 EALTLGQFDHSNIVRLEG-VIT--RGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKG 132 (266)
T ss_pred HHHHHhcCCCCCcCeEEE-EEe--cCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 333445567888888776 443 24578999999999999999976556789999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.+|++|||.+.........
T Consensus 133 ikp~nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------- 163 (266)
T cd05064 133 LAAHKVLVNSDLVCKISGFRRLQEDKSEAIY------------------------------------------------- 163 (266)
T ss_pred ccHhhEEEcCCCcEEECCCcccccccccchh-------------------------------------------------
Confidence 9999999999999999999986442110000
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~ 203 (266)
T cd05064 164 ----------------------------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMS 203 (266)
T ss_pred ----------------------------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhc
Confidence 0001234678999999999899999999999999999775
Q ss_pred ----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 ----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 ----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+.....++.+...+..+.+++.+||..+|.+||++.++++
T Consensus 204 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 204 YGERPYWDMSGQ-DVIKAVEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred CCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 77544333 233333444444455566778899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=261.38 Aligned_cols=203 Identities=20% Similarity=0.261 Sum_probs=162.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---CCCCChhHHHHHHHHHHHHHHhhh-----hcC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH-----SQG 102 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lH-----s~g 102 (879)
.+...+|++++..++ .+.++.....|++|||+++++|.+++... ..++++.+++.++.||+.||+||| +.+
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~ 130 (265)
T cd08217 52 ILRELKHPNIVRYYD-RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT 130 (265)
T ss_pred HHHhcCCCccceeee-eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc
Confidence 445567888877666 44444455689999999999999998442 457899999999999999999999 999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+|+||||+||+++.++.+|++|||++.........
T Consensus 131 i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~-------------------------------------------- 166 (265)
T cd08217 131 VLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSF-------------------------------------------- 166 (265)
T ss_pred ceecCCCHHHEEEecCCCEEEecccccccccCCccc--------------------------------------------
Confidence 999999999999999999999999998764221000
Q ss_pred cccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHH
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil 262 (879)
.....|++.|+|||.+.+..++.++|||||||++
T Consensus 167 ----------------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il 200 (265)
T cd08217 167 ----------------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLI 200 (265)
T ss_pred ----------------------------------------------ccccccCCCccChhhhcCCCCCchhHHHHHHHHH
Confidence 0123678899999999888899999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
|+|++ ||.... .......+.....++.....+..+.+++.+||..+|.+||++.++++|||+
T Consensus 201 ~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 201 YELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 99999 665443 333344444444444445566889999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-28 Score=262.76 Aligned_cols=196 Identities=17% Similarity=0.218 Sum_probs=147.9
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ .+.+.....+|++|||+. ++|.+++......+++.+++.++.||+.||.|||+.||+||||||+||++
T Consensus 56 ~h~~i~~~~~-~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l 133 (282)
T cd07831 56 PHPNILRLIE-VLFDRKTGRLALVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILI 133 (282)
T ss_pred CCCCccceEE-EEecCCCCcEEEEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE
Confidence 4777777665 555554457899999996 48888886544678999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+. +.+|++|||+++......
T Consensus 134 ~~-~~~kl~dfg~~~~~~~~~----------------------------------------------------------- 153 (282)
T cd07831 134 KD-DILKLADFGSCRGIYSKP----------------------------------------------------------- 153 (282)
T ss_pred cC-CCeEEEecccccccccCC-----------------------------------------------------------
Confidence 99 999999999986532110
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
......++.+|+|||++.. ..++.++|||||||++|||++ ||..
T Consensus 154 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~ 201 (282)
T cd07831 154 --------------------------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPG 201 (282)
T ss_pred --------------------------------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCC
Confidence 0011357889999998755 447899999999999999998 6644
Q ss_pred ChhhHhHHhhh--ccc-----------------CCC--------chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 272 GEEKTRTMSSL--RHR-----------------VLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 272 ~~~~~~~~~~~--~~~-----------------~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
........... ... ..+ +.....+..+.++|.+||.++|++||++.++++|||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 202 TNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred CCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 32221111100 000 000 111234577889999999999999999999999999
Q ss_pred c
Q 002801 325 L 325 (879)
Q Consensus 325 ~ 325 (879)
|
T Consensus 282 ~ 282 (282)
T cd07831 282 F 282 (282)
T ss_pred C
Confidence 7
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=260.76 Aligned_cols=203 Identities=17% Similarity=0.184 Sum_probs=159.3
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ .+.++ ..+|+++||+.+++|.+++... ++++..++.++.||+.||.|||++||+|+||+|+
T Consensus 53 l~~l~h~~i~~~~~-~~~~~--~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ 127 (274)
T cd06609 53 LSQCRSPYITKYYG-SFLKG--SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAA 127 (274)
T ss_pred HHHcCCCCeeeeeE-EEEEC--CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence 34456777777665 33332 5689999999999999999654 6899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++++|||+++.......
T Consensus 128 ni~i~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------------ 153 (274)
T cd06609 128 NILLSEEGDVKLADFGVSGQLTSTMS------------------------------------------------------ 153 (274)
T ss_pred HEEECCCCCEEEcccccceeeccccc------------------------------------------------------
Confidence 99999999999999999876422100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|+..|+|||.+.+..++.++|||||||++|||++ |
T Consensus 154 ------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p 197 (274)
T cd06609 154 ------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPP 197 (274)
T ss_pred ------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 0122367888999999998889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|....... ....+.....+..... .++.+.+++.+||..+|++|||++++++||||.....
T Consensus 198 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 198 LSDLHPMR-VLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred cccCchHH-HHHHhhhcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 65443322 2222222222222222 5678899999999999999999999999999987543
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-27 Score=244.66 Aligned_cols=262 Identities=24% Similarity=0.315 Sum_probs=224.4
Q ss_pred cCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCee
Q 002801 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 621 (879)
Q Consensus 542 d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 621 (879)
.-.+.+++..+..+...+. --...|+++.|-.||++||+|+..|.|+|||..+. .. ......|..++.
T Consensus 47 S~rvqly~~~~~~~~k~~s-----rFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r-----~i--LR~~~ah~apv~ 114 (487)
T KOG0310|consen 47 SVRVQLYSSVTRSVRKTFS-----RFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSR-----VI--LRQLYAHQAPVH 114 (487)
T ss_pred ccEEEEEecchhhhhhhHH-----hhccceeEEEeecCCeEEEccCCcCcEEEeccccH-----HH--HHHHhhccCcee
Confidence 4467778777665554433 23578999999999999999999999999996541 00 112235889999
Q ss_pred EEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEe
Q 002801 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG-VSIGTIK 700 (879)
Q Consensus 622 ~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~-~~i~~~~ 700 (879)
.+.|+|.++..+++|+.|+.+++||+.+......+.+|+.-|.|.+|+|.++.+++|||.||+|++||+++. ..+.++.
T Consensus 115 ~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln 194 (487)
T KOG0310|consen 115 VTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN 194 (487)
T ss_pred EEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec
Confidence 999999999999999999999999999998777889999999999999988999999999999999999987 7889999
Q ss_pred cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcc
Q 002801 701 TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTS 779 (879)
Q Consensus 701 ~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~ 779 (879)
+..+|.+|.+-|. |..|++++ ...|++||+.++.+.+..+..|.+.|+|+.+. ++..|+|||-|+.+++||+.+.
T Consensus 195 hg~pVe~vl~lps-gs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~-- 270 (487)
T KOG0310|consen 195 HGCPVESVLALPS-GSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNY-- 270 (487)
T ss_pred CCCceeeEEEcCC-CCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccce--
Confidence 9999999999998 77888776 56899999998876677777799999999998 9999999999999999998775
Q ss_pred cccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCC
Q 002801 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 780 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~ 824 (879)
+.++.+. -.++|.+++.+|+++.++.|..||.+.+-+...
T Consensus 271 ----Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~~ 310 (487)
T KOG0310|consen 271 ----KVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRREV 310 (487)
T ss_pred ----EEEEeee-cccceeeEEecCCCceEEEecccceeeeehhhc
Confidence 5666665 567899999999999999999999988875543
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=266.34 Aligned_cols=204 Identities=14% Similarity=0.164 Sum_probs=158.6
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ .+.+ ....|+||||+.|++|.+++.. ..+++.++..++.||+.||+|||++||+||||||+
T Consensus 71 l~~~~h~~v~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~ 145 (296)
T cd06654 71 MRENKNPNIVNYLD-SYLV--GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 145 (296)
T ss_pred HHhCCCCCEeeEEE-EEEe--CCEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHH
Confidence 34457777777665 3332 3468999999999999999954 35799999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
|||++.++.+|++|||++........
T Consensus 146 Nill~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------------ 171 (296)
T cd06654 146 NILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------------ 171 (296)
T ss_pred HEEEcCCCCEEECccccchhcccccc------------------------------------------------------
Confidence 99999999999999999865311100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|++.|+|||.+.+..++.++|||||||++|||++ |
T Consensus 172 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~p 215 (296)
T cd06654 172 ------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215 (296)
T ss_pred ------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCC
Confidence 0012367889999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCC-chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 269 FSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|..................+ +......+.+.+++.+||.++|.+||++.++++||||.....
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 216 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred CCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 76554433322222222111 222345677889999999999999999999999999986543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-27 Score=254.18 Aligned_cols=275 Identities=21% Similarity=0.328 Sum_probs=229.9
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccc-eEEeccCCCeeE-EEEeCCCCCeEEEeeCCCc
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYP-VVEMASRSKLSS-ICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~-~~~~~~~~~i~~-l~~~~~~~~~l~s~~~dg~ 641 (879)
+.+|...|+.+++.++ ..++++|.||++++|+-.... ..+ .....+.+-|.+ +|+-+.++..|++|+.|++
T Consensus 10 l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~------~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~ 82 (745)
T KOG0301|consen 10 LEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQ------YLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTT 82 (745)
T ss_pred eccCccchheeEecCC-eEEeecCCCCceeeeeccCcc------cccceecccCcceeeccceeccccCcceEeecccce
Confidence 4589999999998754 478999999999999854311 111 112235666776 8888766778999999999
Q ss_pred EEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEE
Q 002801 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~t 720 (879)
|.+|...+..++..+++|+..|+|++... ++. ++|||.|.++++|-.. ++...+. |.+.|..|+.-|. + .++|
T Consensus 83 i~v~~~~~~~P~~~LkgH~snVC~ls~~~-~~~-~iSgSWD~TakvW~~~--~l~~~l~gH~asVWAv~~l~e-~-~~vT 156 (745)
T KOG0301|consen 83 IIVFKLSQAEPLYTLKGHKSNVCSLSIGE-DGT-LISGSWDSTAKVWRIG--ELVYSLQGHTASVWAVASLPE-N-TYVT 156 (745)
T ss_pred EEEEecCCCCchhhhhccccceeeeecCC-cCc-eEecccccceEEecch--hhhcccCCcchheeeeeecCC-C-cEEe
Confidence 99999999999999999999999999776 565 9999999999999765 3444454 5678999999998 4 8999
Q ss_pred EeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEE
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 721 gs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
||.|.+|++|.- ++ .+.+|.+|...|..+++.++..++|++.||.|++|++. + .++..+.||++-|+++.
T Consensus 157 gsaDKtIklWk~--~~-~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~~-g------e~l~~~~ghtn~vYsis 226 (745)
T KOG0301|consen 157 GSADKTIKLWKG--GT-LLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDLD-G------EVLLEMHGHTNFVYSIS 226 (745)
T ss_pred ccCcceeeeccC--Cc-hhhhhccchhheeeeEEecCCCeEeecCCceEEEEecc-C------ceeeeeeccceEEEEEE
Confidence 999999999975 33 48899999999999999988899999999999999994 3 78999999999999999
Q ss_pred EecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 801 LSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 801 ~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..++++.|+|+|+|++++||+.. ...+.+..+ ...|+++++-++|+ +++|++||.|+||..
T Consensus 227 ~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lP-------------ttsiWsa~~L~NgD--Ivvg~SDG~VrVfT~ 287 (745)
T KOG0301|consen 227 MALSDGLIVSTGEDRTLRIWKKD--ECVQVITLP-------------TTSIWSAKVLLNGD--IVVGGSDGRVRVFTV 287 (745)
T ss_pred ecCCCCeEEEecCCceEEEeecC--ceEEEEecC-------------ccceEEEEEeeCCC--EEEeccCceEEEEEe
Confidence 88889999999999999999987 444444322 33599999999999 999999999999964
|
|
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-29 Score=263.40 Aligned_cols=202 Identities=20% Similarity=0.209 Sum_probs=159.3
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlKP 110 (879)
+....|++++..++ .+.++ ...|++|||+.+++|.+++......+++..+..++.||+.||+|||+ .||+|+||||
T Consensus 53 l~~~~~~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~ 129 (265)
T cd06605 53 LHKCNSPYIVGFYG-AFYNN--GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKP 129 (265)
T ss_pred HHHCCCCchhhhhe-eeecC--CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCH
Confidence 34456888877666 44433 56899999999999999996654678999999999999999999999 9999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+.......
T Consensus 130 ~ni~~~~~~~~~l~d~g~~~~~~~~~------------------------------------------------------ 155 (265)
T cd06605 130 SNILVNSRGQIKLCDFGVSGQLVNSL------------------------------------------------------ 155 (265)
T ss_pred HHEEECCCCCEEEeecccchhhHHHH------------------------------------------------------
Confidence 99999999999999999885431100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
. ....|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 156 -------------------------------------~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 197 (265)
T cd06605 156 -------------------------------------A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF 197 (265)
T ss_pred -------------------------------------h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0 01367888999999998889999999999999999999
Q ss_pred CCCCCh----hhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGE----EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||.... .....+..+.....+..... .++.+.++|.+||..+|.+|||+.+++.||||+..
T Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 198 PYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred CCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 775441 22223333333322222222 56788999999999999999999999999999754
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=260.58 Aligned_cols=201 Identities=19% Similarity=0.220 Sum_probs=160.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ...+|++|||+.|++|.+++.+. ...+++.++..++.|++.||.|||+.||+|+|||
T Consensus 52 ~l~~~~h~~i~~~~~-~~~~--~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~ 128 (256)
T cd08221 52 ILSLLQHPNIIAYYN-HFMD--DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIK 128 (256)
T ss_pred HHHhCCCCCeeEEEe-EEec--CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 455567888887776 3433 35689999999999999999554 4568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++.......
T Consensus 129 p~ni~~~~~~~~kl~d~~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd08221 129 TLNIFLTKAGLIKLGDFGISKILGSEYS---------------------------------------------------- 156 (256)
T ss_pred hHhEEEeCCCCEEECcCcceEEcccccc----------------------------------------------------
Confidence 9999999999999999999865321100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08221 157 --------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLK 198 (256)
T ss_pred --------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCC
Confidence 0012367899999999988889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..... ......+....+++.....+..+.+++.+||.++|.+||++.++++|||+
T Consensus 199 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 199 RTFDATNP-LNLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred CCCCCCCH-HHHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 6654333 33333333444444445567789999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=263.02 Aligned_cols=208 Identities=16% Similarity=0.180 Sum_probs=158.6
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
..+.+.+|++++..++ .+.++....+|++|||++|++|.+++. .....+++..+..|+.||+.||+|||+.||+|+
T Consensus 51 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~ 129 (287)
T cd06621 51 EINKSCKSPYIVKYYG-AFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHR 129 (287)
T ss_pred HHHHhCCCCCeeeeee-EEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 3455667888888776 555555667899999999999998863 234568999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||+|+||+++.++.++++|||++.......
T Consensus 130 dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------------- 159 (287)
T cd06621 130 DIKPSNILLTRKGQVKLCDFGVSGELVNSL-------------------------------------------------- 159 (287)
T ss_pred CCCHHHEEEecCCeEEEeeccccccccccc--------------------------------------------------
Confidence 999999999999999999999985531110
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
.....++..|+|||.+.+..++.++|||||||++|||+
T Consensus 160 ------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~ 197 (287)
T cd06621 160 ------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVA 197 (287)
T ss_pred ------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH
Confidence 01125678899999998888999999999999999999
Q ss_pred c---CCCCCh----hhHhHHhhhcccCCCc---hh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 267 C---PFSTGE----EKTRTMSSLRHRVLPP---QL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 267 ~---pf~~~~----~~~~~~~~~~~~~~~~---~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
+ ||.... ........+.....+. .. ...++.+.+|+.+||.++|.+|||+.|+++||||.....
T Consensus 198 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 198 QNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred hCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence 9 665431 1111222222211111 10 112356789999999999999999999999999975443
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=273.78 Aligned_cols=196 Identities=14% Similarity=0.154 Sum_probs=150.7
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------------------------------- 76 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------------------------------- 76 (879)
+|+|++..++ .|.+ ....|++||||+||+|.+++....
T Consensus 97 ~HpnIv~l~~-~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 173 (375)
T cd05104 97 NHINIVNLLG-ACTV--GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKP 173 (375)
T ss_pred CCcceeeeee-eecc--CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCC
Confidence 7888888776 5543 346899999999999999984321
Q ss_pred -----------------------------------CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCe
Q 002801 77 -----------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 121 (879)
Q Consensus 77 -----------------------------------~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~v 121 (879)
..+++..++.++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~ 253 (375)
T cd05104 174 GVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRIT 253 (375)
T ss_pred CcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcE
Confidence 247888999999999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecc
Q 002801 122 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 201 (879)
Q Consensus 122 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (879)
|++|||+++........
T Consensus 254 kl~DfG~a~~~~~~~~~--------------------------------------------------------------- 270 (375)
T cd05104 254 KICDFGLARDIRNDSNY--------------------------------------------------------------- 270 (375)
T ss_pred EEecCccceeccCcccc---------------------------------------------------------------
Confidence 99999998754211000
Q ss_pred ccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHh
Q 002801 202 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 277 (879)
Q Consensus 202 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~ 277 (879)
.......++..|+|||++.+..++.++|||||||+||||++ ||........
T Consensus 271 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~ 325 (375)
T cd05104 271 -------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK 325 (375)
T ss_pred -------------------------cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH
Confidence 00011234667999999999999999999999999999996 6654433333
Q ss_pred HHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 278 TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
....+.....+..+...+.++.+|+.+||..||++||++.++++.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 326 FYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 334444333333333445788999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=267.24 Aligned_cols=206 Identities=14% Similarity=0.156 Sum_probs=154.8
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|++++..++ ++.+ ....|++|||+. ++|.+++.+....+++..++.++.||+.||+|||++||+|+|||
T Consensus 56 ~~l~~l~h~nI~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlk 131 (301)
T cd07873 56 SLLKDLKHANIVTLHD-IIHT--EKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLK 131 (301)
T ss_pred HHHHhcCCCCcceEEE-EEec--CCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence 3445567888888777 4433 346899999996 58999986655678999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++....+..
T Consensus 132 p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 159 (301)
T cd07873 132 PQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------------- 159 (301)
T ss_pred HHHEEECCCCcEEECcCcchhccCCCCC----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~- 267 (879)
......+++.|+|||.+.+. .++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg 201 (301)
T cd07873 160 --------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTG 201 (301)
T ss_pred --------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhC
Confidence 00113568899999998764 48899999999999999999
Q ss_pred --CCCCChhhHhHHh--hhccc------------------CCCc--------hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 --PFSTGEEKTRTMS--SLRHR------------------VLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 --pf~~~~~~~~~~~--~~~~~------------------~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||........... ..... ..+. .....++.+.+||.+||+.||.+|||+.
T Consensus 202 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~ 281 (301)
T cd07873 202 RPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAE 281 (301)
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHH
Confidence 6654332211110 00000 0000 1123456788999999999999999999
Q ss_pred HHhhcccccCCc
Q 002801 318 ELLQSEFLNEPR 329 (879)
Q Consensus 318 evl~hp~~~~~~ 329 (879)
|+++||||..+.
T Consensus 282 eil~h~~f~~~~ 293 (301)
T cd07873 282 EAMKHPYFHCLG 293 (301)
T ss_pred HHhcCccccccc
Confidence 999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=253.97 Aligned_cols=203 Identities=18% Similarity=0.190 Sum_probs=141.9
Q ss_pred ccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccc
Q 002801 51 EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (879)
Q Consensus 51 ~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~ 129 (879)
+.....+||.|.+ |.|+.++|+. ...+++...+++|.+||+++|.|||+.+++|.||||+|||+..+...+.-.-+..
T Consensus 161 dyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 161 DYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred hccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence 3455678888888 8899999966 4457999999999999999999999999999999999999965544433222211
Q ss_pred -cCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccc
Q 002801 130 -SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 208 (879)
Q Consensus 130 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (879)
.... .......++
T Consensus 240 ~~~~r------------------------------------------------------------------~~ks~~I~v 253 (415)
T KOG0671|consen 240 VCFIR------------------------------------------------------------------PLKSTAIKV 253 (415)
T ss_pred cceec------------------------------------------------------------------cCCCcceEE
Confidence 0000 000112233
Q ss_pred cccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh--hhHhHHhhhc
Q 002801 209 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE--EKTRTMSSLR 283 (879)
Q Consensus 209 ~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~--~~~~~~~~~~ 283 (879)
+|||.+....+ -.+..+-|..|+|||++.|-+++.++||||+||||+||.+ -|.+.+ ++.+.|..+.
T Consensus 254 IDFGsAtf~~e--------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIl 325 (415)
T KOG0671|consen 254 IDFGSATFDHE--------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERIL 325 (415)
T ss_pred EecCCcceecc--------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhh
Confidence 44443221111 1134578999999999999999999999999999999999 454444 3334444443
Q ss_pred ccCCCch-----------------------------------hhc--------cChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 284 HRVLPPQ-----------------------------------LLL--------KFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 284 ~~~~~~~-----------------------------------~~~--------~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
+. +|.. +.. ....+.+|+.+||..||.+|+|+.|+|
T Consensus 326 Gp-~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL 404 (415)
T KOG0671|consen 326 GP-IPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREAL 404 (415)
T ss_pred CC-CcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHh
Confidence 31 1110 000 012367999999999999999999999
Q ss_pred hcccccCCc
Q 002801 321 QSEFLNEPR 329 (879)
Q Consensus 321 ~hp~~~~~~ 329 (879)
+||||+...
T Consensus 405 ~HpFF~~~~ 413 (415)
T KOG0671|consen 405 SHPFFARLT 413 (415)
T ss_pred cCHHhhcCC
Confidence 999998754
|
|
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=274.46 Aligned_cols=195 Identities=16% Similarity=0.176 Sum_probs=149.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------------------------------- 75 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------------------------------- 75 (879)
+|++++..++ .|.+ ....|++||||.+|+|.+++.+.
T Consensus 100 ~h~nIv~~~~-~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (374)
T cd05106 100 QHKNIVNLLG-ACTH--GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQ 176 (374)
T ss_pred cCCceeeEee-EecC--CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccccc
Confidence 6888887766 5543 34689999999999999988432
Q ss_pred -----------------------------CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeec
Q 002801 76 -----------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIES 126 (879)
Q Consensus 76 -----------------------------~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~df 126 (879)
..++++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~Df 256 (374)
T cd05106 177 GSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDF 256 (374)
T ss_pred ccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeec
Confidence 124788899999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccc
Q 002801 127 ASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEH 206 (879)
Q Consensus 127 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (879)
|+++........
T Consensus 257 Gla~~~~~~~~~-------------------------------------------------------------------- 268 (374)
T cd05106 257 GLARDIMNDSNY-------------------------------------------------------------------- 268 (374)
T ss_pred eeeeeccCCcce--------------------------------------------------------------------
Confidence 998653211000
Q ss_pred cccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhh
Q 002801 207 KILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSL 282 (879)
Q Consensus 207 ~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~ 282 (879)
.......++..|||||++.+..++.++|||||||+||||++ ||............+
T Consensus 269 --------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~ 328 (374)
T cd05106 269 --------------------VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV 328 (374)
T ss_pred --------------------eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH
Confidence 00011234667999999988889999999999999999985 775544333333333
Q ss_pred cccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 283 RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
.....++.....++.+.+++.+||+.||.+||++.++++
T Consensus 329 ~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 329 KRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred HcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 333233333345688999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=262.16 Aligned_cols=204 Identities=19% Similarity=0.230 Sum_probs=158.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|.+++.+....+++.+++.++.|++.||.|||++||+|+||||
T Consensus 55 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p 131 (280)
T cd06611 55 ILSECKHPNIVGLYE-AYFY--ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKA 131 (280)
T ss_pred HHHhCCCCceeEEEE-EEec--CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCh
Confidence 344556888877766 4433 4468999999999999999976656799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 132 ~nili~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 158 (280)
T cd06611 132 GNILLTLDGDVKLADFGVSAKNKSTLQ----------------------------------------------------- 158 (280)
T ss_pred hhEEECCCCCEEEccCccchhhccccc-----------------------------------------------------
Confidence 999999999999999998754311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-----CCCCCccCcchhHHHHHHHh
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDIwSlGvil~el 265 (879)
......|++.|+|||++. +.+++.++|||||||++|||
T Consensus 159 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l 201 (280)
T cd06611 159 -------------------------------------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIEL 201 (280)
T ss_pred -------------------------------------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHH
Confidence 012246788999999985 34578899999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
++ ||...... ..+..+.....+ ......+..+.+++.+||+.+|.+||++.++++||||...
T Consensus 202 ~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 202 AQMEPPHHELNPM-RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HhCCCCcccCCHH-HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 99 66543322 222233222211 1223456788999999999999999999999999999875
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=264.52 Aligned_cols=205 Identities=16% Similarity=0.157 Sum_probs=157.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..+. .+.+ +...|++|||+.+++|..++.. ....+++..+..++.|++.||.|||++||+|||||
T Consensus 53 il~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dik 129 (285)
T cd05632 53 ILEKVNSQFVVNLAY-AYET--KDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLK 129 (285)
T ss_pred HHHHcCCcCceeEEE-EEec--CCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence 444567777776655 3322 3468999999999999988843 23468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||++.......
T Consensus 130 p~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------------- 156 (285)
T cd05632 130 PENILLDDYGHIRISDLGLAVKIPEGE----------------------------------------------------- 156 (285)
T ss_pred HHHEEECCCCCEEEecCCcceecCCCC-----------------------------------------------------
Confidence 999999999999999999885421100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~ 198 (285)
T cd05632 157 --------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQ 198 (285)
T ss_pred --------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCC
Confidence 0012368999999999998889999999999999999999
Q ss_pred -CCCCChhhHhHHhhh--cccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCc
Q 002801 268 -PFSTGEEKTRTMSSL--RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~ 329 (879)
||............. .....+......++.+.+|+.+||..||++||+ +.+++.|+||+...
T Consensus 199 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~ 268 (285)
T cd05632 199 SPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN 268 (285)
T ss_pred CCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence 876543322111111 111112222345677889999999999999999 88999999998764
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=259.69 Aligned_cols=198 Identities=16% Similarity=0.184 Sum_probs=155.2
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
..+|++++..++ .+.+ ....|++|||+.+++|.+++......+++.+++.++.||+.||.|||+.||+|+||+|+||
T Consensus 54 ~l~~~~i~~~~~-~~~~--~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni 130 (256)
T cd06612 54 QCDSPYIVKYYG-SYFK--NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNI 130 (256)
T ss_pred hCCCCcEeeeee-eeec--CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceE
Confidence 347788877666 3433 3568999999999999999976567899999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
+++.++.++++|||++........
T Consensus 131 ~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------------- 154 (256)
T cd06612 131 LLNEEGQAKLADFGVSGQLTDTMA-------------------------------------------------------- 154 (256)
T ss_pred EECCCCcEEEcccccchhcccCcc--------------------------------------------------------
Confidence 999999999999999865321100
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......|+..|+|||.+.+..++.++|||||||++|||++ ||.
T Consensus 155 ----------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~ 200 (256)
T cd06612 155 ----------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYS 200 (256)
T ss_pred ----------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 0012357888999999988889999999999999999999 665
Q ss_pred CChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 271 TGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
.......... ......+ ......+..+.+++.+||..+|.+|||+.++++||||
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 201 DIHPMRAIFM-IPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred Ccchhhhhhh-hccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 4333222211 1111111 1122345678899999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-29 Score=268.30 Aligned_cols=206 Identities=14% Similarity=0.152 Sum_probs=159.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||++|++|.+++.+ ..+++.+++.++.|++.||.|||+.||+||||||
T Consensus 69 ~l~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p 143 (297)
T cd06656 69 VMRENKNPNIVNYLD-SYLV--GDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKS 143 (297)
T ss_pred HHHhCCCCCEeeEEE-EEec--CCEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 445567888887776 3332 3468999999999999999954 3579999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.++++|||++........
T Consensus 144 ~Nili~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 170 (297)
T cd06656 144 DNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------------- 170 (297)
T ss_pred HHEEECCCCCEEECcCccceEccCCcc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|+|++
T Consensus 171 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~ 213 (297)
T cd06656 171 -------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213 (297)
T ss_pred -------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 0012367889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCC-chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
||..................+ ......++.+.+|+.+||..+|.+||++.++++||||......
T Consensus 214 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~ 278 (297)
T cd06656 214 PYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPL 278 (297)
T ss_pred CCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccc
Confidence 775544322222222211111 1223445678899999999999999999999999999865433
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-26 Score=226.00 Aligned_cols=276 Identities=16% Similarity=0.258 Sum_probs=220.4
Q ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEE
Q 002801 566 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (879)
Q Consensus 566 ~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~v 644 (879)
...+.|.+|+||| ...++++++.|++|++|+++... ...+.....+.++|.|++|+. +++.+++|+.|+.+++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g-----~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~ 98 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSG-----QLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKL 98 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCC-----cccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEE
Confidence 3467899999999 55677799999999999998621 112334456899999999998 4899999999999999
Q ss_pred EEcCCCeEEEEeccCCCcEEEEEEecCCCC--EEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEe
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPT--LLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 645 wd~~~~~~~~~~~~h~~~v~sv~~sp~~~~--~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs 722 (879)
||+.++|. ..+..|..+|.++.|-+ ... .|+|||-|.+|+.||.++..++.++..+..|.++..- ..+++++.
T Consensus 99 wDL~S~Q~-~~v~~Hd~pvkt~~wv~-~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~---~pm~vVat 173 (347)
T KOG0647|consen 99 WDLASGQV-SQVAAHDAPVKTCHWVP-GMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVL---YPMAVVAT 173 (347)
T ss_pred EEccCCCe-eeeeecccceeEEEEec-CCCcceeEecccccceeecccCCCCeeeeeeccceeeehhcc---CceeEEEe
Confidence 99999965 45678999999999987 554 8999999999999999999999999999999888775 34788889
Q ss_pred CCCeEEEEEcCCCceeeEEEcc-CCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC------
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIG-HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN------ 794 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~-h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~------ 794 (879)
.+..|.+|+|+++......... -+-.+.+|+.. +.+..+.||..|.+-+..+..+.. ..-.+|+.|..
T Consensus 174 a~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~----~~nFtFkCHR~~~~~~~ 249 (347)
T KOG0647|consen 174 AERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNP----KDNFTFKCHRSTNSVND 249 (347)
T ss_pred cCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCc----cCceeEEEeccCCCCCC
Confidence 9999999999887532222221 12346777665 777779999999999999988632 33356666652
Q ss_pred ---cEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEE-EEeCC
Q 002801 795 ---VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLV-AANSS 870 (879)
Q Consensus 795 ---~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~-s~~~D 870 (879)
.|++|+|+|.-+.|+|+|.||++.+||......+.+. ..|.++|++.+|+.+|. ++| +.|.|
T Consensus 250 ~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s-------------~~~~qpItcc~fn~~G~-ifaYA~gYD 315 (347)
T KOG0647|consen 250 DVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS-------------ETHPQPITCCSFNRNGS-IFAYALGYD 315 (347)
T ss_pred ceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc-------------CcCCCccceeEecCCCC-EEEEEeecc
Confidence 4788999999999999999999999999876555433 35788999999999999 666 44444
|
|
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=260.96 Aligned_cols=274 Identities=21% Similarity=0.358 Sum_probs=238.4
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd 646 (879)
|...+.+..|+ +.++++++.|++|++|+....... .....+|.+.|.++++.. .+..+++|+.|.+++|||
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i------~~~l~GH~g~V~~l~~~~-~~~~lvsgS~D~t~rvWd 277 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLI------LTRLVGHFGGVWGLAFPS-GGDKLVSGSTDKTERVWD 277 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEE------EeeccCCCCCceeEEEec-CCCEEEEEecCCcEEeEe
Confidence 45677788888 568999999999999998763221 112356999999999976 589999999999999999
Q ss_pred cCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEeCCC
Q 002801 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADH 725 (879)
Q Consensus 647 ~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~ 725 (879)
..++++...+.+|...|.++... +..+++||.|.+|++|++.+++.+.++. +.+.|.+|..+ +.++++|+.|+
T Consensus 278 ~~sg~C~~~l~gh~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~ 351 (537)
T KOG0274|consen 278 CSTGECTHSLQGHTSSVRCLTID---PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDG 351 (537)
T ss_pred cCCCcEEEEecCCCceEEEEEcc---CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCc
Confidence 99999999999999999999875 4789999999999999999999999999 78889999998 57999999999
Q ss_pred eEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC
Q 002801 726 RIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD 805 (879)
Q Consensus 726 ~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 805 (879)
+|++||+++.+ ++.++.+|...|+++.+.....+++|+.|++|++||+.+.. +++.++.+|...+..+.+ .+
T Consensus 352 ~v~VW~~~~~~-cl~sl~gH~~~V~sl~~~~~~~~~Sgs~D~~IkvWdl~~~~-----~c~~tl~~h~~~v~~l~~--~~ 423 (537)
T KOG0274|consen 352 TVKVWDPRTGK-CLKSLSGHTGRVYSLIVDSENRLLSGSLDTTIKVWDLRTKR-----KCIHTLQGHTSLVSSLLL--RD 423 (537)
T ss_pred eEEEEEhhhce-eeeeecCCcceEEEEEecCcceEEeeeeccceEeecCCchh-----hhhhhhcCCccccccccc--cc
Confidence 99999999888 59999999999999977533999999999999999999862 689999999998866654 57
Q ss_pred CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 806 GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 806 ~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
++|++++.|++|++||...++.+..+.-. |.+.|+++++. .. .+++++.||.+++|++
T Consensus 424 ~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~------------~~~~v~~l~~~--~~-~il~s~~~~~~~l~dl 481 (537)
T KOG0274|consen 424 NFLVSSSADGTIKLWDAEEGECLRTLEGR------------HVGGVSALALG--KE-EILCSSDDGSVKLWDL 481 (537)
T ss_pred ceeEeccccccEEEeecccCceeeeeccC------------CcccEEEeecC--cc-eEEEEecCCeeEEEec
Confidence 89999999999999999998888766511 45679999887 45 7999999999999986
|
|
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-29 Score=269.77 Aligned_cols=206 Identities=17% Similarity=0.175 Sum_probs=161.4
Q ss_pred cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 21 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
..||.|... +..-.|.|++.+++ +|-.. ..-||..+|+|-+|..+|.-.+.+|+....+.|++||++|++|||.
T Consensus 433 qaFKnEVa~--lkkTRH~NIlLFMG-~~~~p---~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA 506 (678)
T KOG0193|consen 433 QAFKNEVAV--LKKTRHENILLFMG-ACMNP---PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA 506 (678)
T ss_pred HHHHHHHHH--Hhhcchhhheeeeh-hhcCC---ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh
Confidence 456666553 44557888888777 66433 3489999999999999997766789999999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
++|||||||..||+|..++.|||+|||++........+.++
T Consensus 507 K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~--------------------------------------- 547 (678)
T KOG0193|consen 507 KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL--------------------------------------- 547 (678)
T ss_pred hhhhhhhccccceEEccCCcEEEecccceeeeeeecccccc---------------------------------------
Confidence 99999999999999999999999999999653222111000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC---CCCCccCcchh
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYR 257 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwS 257 (879)
..-.|..-|||||+++. .+|++.|||||
T Consensus 548 -------------------------------------------------~qp~gsilwmAPEvIRmqd~nPfS~qSDVYa 578 (678)
T KOG0193|consen 548 -------------------------------------------------EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYA 578 (678)
T ss_pred -------------------------------------------------CCCccchhhhcHHHHhhcccCCCCcccchhh
Confidence 11245677999999974 45999999999
Q ss_pred HHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchh----hccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 258 lGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|||++|||+| ||. ....+..+..+..+.+.+.. .++..++++|+..||..++++||.+.+||.
T Consensus 579 FGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 579 FGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred hhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 9999999999 887 55555555555555443332 234447889999999999999999999986
|
|
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=263.60 Aligned_cols=206 Identities=17% Similarity=0.289 Sum_probs=161.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .....|+++||+.|++|.+++.. .++++.+++.++.||+.||+|||++||+||||||
T Consensus 69 ~l~~~~h~~vv~~~~-~~~--~~~~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p 143 (285)
T cd06648 69 IMRDYQHPNIVEMYS-SYL--VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKS 143 (285)
T ss_pred HHHHcCCCChheEEE-EEE--cCCeEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCh
Confidence 344567888877666 322 24568999999999999999966 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+........
T Consensus 144 ~Nil~~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 170 (285)
T cd06648 144 DSILLTSDGRVKLSDFGFCAQVSKEVP----------------------------------------------------- 170 (285)
T ss_pred hhEEEcCCCcEEEcccccchhhccCCc-----------------------------------------------------
Confidence 999999999999999998754311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 171 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~ 213 (285)
T cd06648 171 -------------------------------------RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEP 213 (285)
T ss_pred -------------------------------------ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCC
Confidence 0012367899999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCch
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~ 332 (879)
||..... ...+..+.....+. .....++.+.+++.+||..+|.+||++.++++||||.....+.
T Consensus 214 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~ 279 (285)
T cd06648 214 PYFNEPP-LQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGPPS 279 (285)
T ss_pred CCcCCCH-HHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCCcc
Confidence 7755433 23333333332211 1222557889999999999999999999999999998766543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-28 Score=265.95 Aligned_cols=207 Identities=16% Similarity=0.221 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|+||||+ +++|.+++......+++.+++.++.||++||+|||++||+|+||||
T Consensus 55 ~l~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p 130 (298)
T cd07841 55 LLQELKHPNIIGLLD-VFGH--KSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKP 130 (298)
T ss_pred HHhhcCCCCChhhhh-eeec--CCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCh
Confidence 344556888877776 4443 45689999999 9999999966544789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||+++.......
T Consensus 131 ~nill~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 157 (298)
T cd07841 131 NNLLIASDGVLKLADFGLARSFGSPNR----------------------------------------------------- 157 (298)
T ss_pred hhEEEcCCCCEEEccceeeeeccCCCc-----------------------------------------------------
Confidence 999999999999999999866422100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 158 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~ 200 (298)
T cd07841 158 -------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRV 200 (298)
T ss_pred -------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 0011256788999999865 457999999999999999999
Q ss_pred CCCCChhhHhHHhhhccc----------------------CCC-----chhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 268 PFSTGEEKTRTMSSLRHR----------------------VLP-----PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~----------------------~~~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
|++...........+... ..+ ..+...+..+.++|.+||.++|.+|||+.|++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l 280 (298)
T cd07841 201 PFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQAL 280 (298)
T ss_pred ccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHh
Confidence 443333222211111100 000 01123356788999999999999999999999
Q ss_pred hcccccCCcCc
Q 002801 321 QSEFLNEPRDS 331 (879)
Q Consensus 321 ~hp~~~~~~~~ 331 (879)
+||||.+...+
T Consensus 281 ~~~~~~~~~~~ 291 (298)
T cd07841 281 EHPYFSNDPAP 291 (298)
T ss_pred hCccccCCCCC
Confidence 99999975543
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=262.02 Aligned_cols=198 Identities=15% Similarity=0.083 Sum_probs=154.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ ++. ....+++|||+.+++|.+++....+.+++..++.++.||+.||+|||++||+||||||
T Consensus 62 ~l~~l~h~~iv~~~~-~~~---~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp 137 (279)
T cd05111 62 AMGSLDHAYIVRLLG-ICP---GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAA 137 (279)
T ss_pred HHhcCCCCCcceEEE-EEC---CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCc
Confidence 446678898888776 443 2357899999999999999976656799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++........
T Consensus 138 ~nili~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------------------- 165 (279)
T cd05111 138 RNILLKSDSIVQIADFGVADLLYPDDKK---------------------------------------------------- 165 (279)
T ss_pred ceEEEcCCCcEEEcCCccceeccCCCcc----------------------------------------------------
Confidence 9999999999999999998653211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 ------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~ 209 (279)
T cd05111 166 ------------------------------------YFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGA 209 (279)
T ss_pred ------------------------------------cccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCC
Confidence 00011345778999999998889999999999999999997
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++....+...+..++.+||..+|++|||+.|+++
T Consensus 210 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 210 EPYAGMRP-HEVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred CCCCCCCH-HHHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 6644332 2222333333333333345567889999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=268.11 Aligned_cols=197 Identities=18% Similarity=0.196 Sum_probs=151.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------------------------------- 76 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------------------------------- 76 (879)
+|++++..++ .|.. .....|++|||+.+++|.++|....
T Consensus 69 ~h~niv~~~~-~~~~-~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (337)
T cd05054 69 HHLNVVNLLG-ACTK-PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSG 146 (337)
T ss_pred cCcchhheee-eEec-CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccc
Confidence 6778877766 5543 3446789999999999999984321
Q ss_pred ---------------------CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCC
Q 002801 77 ---------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 135 (879)
Q Consensus 77 ---------------------~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~ 135 (879)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~ 226 (337)
T cd05054 147 FIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKD 226 (337)
T ss_pred cccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccC
Confidence 25789999999999999999999999999999999999999999999999999764211
Q ss_pred CcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccch
Q 002801 136 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 215 (879)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 215 (879)
...
T Consensus 227 ~~~----------------------------------------------------------------------------- 229 (337)
T cd05054 227 PDY----------------------------------------------------------------------------- 229 (337)
T ss_pred cch-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchh
Q 002801 216 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQL 291 (879)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~ 291 (879)
.......++..|+|||++.+..++.++|||||||+||||++ ||............+.....+...
T Consensus 230 -----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 298 (337)
T cd05054 230 -----------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAP 298 (337)
T ss_pred -----------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCC
Confidence 00012345677999999999999999999999999999986 665433333333333333333333
Q ss_pred hccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 292 ~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
....+.+.+++.+||+.+|++||++.|+++|
T Consensus 299 ~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 299 EYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 4556788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-28 Score=263.64 Aligned_cols=200 Identities=19% Similarity=0.183 Sum_probs=157.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIV 95 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l 95 (879)
.+....|++++..++ .+.+ ....|++|||+++++|.+++.... ..+++.+++.++.||+.||
T Consensus 61 ~l~~l~h~~i~~~~~-~~~~--~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al 137 (283)
T cd05048 61 LMSDLQHPNIVCLLG-VCTK--EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGM 137 (283)
T ss_pred HHHhcCCcccceEEE-EEcC--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHH
Confidence 345567788877666 4433 345799999999999999995421 4578899999999999999
Q ss_pred HhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcccccccccc
Q 002801 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 96 ~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
.|||++||+|+||||+||+++.++.+||+|||+++........
T Consensus 138 ~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~------------------------------------- 180 (283)
T cd05048 138 EYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYY------------------------------------- 180 (283)
T ss_pred HHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccc-------------------------------------
Confidence 9999999999999999999999999999999998653111000
Q ss_pred CCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcc
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (879)
.......+++.|+|||.+.+..++.++||
T Consensus 181 ---------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDv 209 (283)
T cd05048 181 ---------------------------------------------------RVQSKSLLPVRWMPPEAILYGKFTTESDI 209 (283)
T ss_pred ---------------------------------------------------cccCCCcccccccCHHHhccCcCchhhhH
Confidence 00011356788999999988889999999
Q ss_pred hhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 256 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 256 wSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||||+||||++ ||..... ...+..+.....++.....++.+.+|+.+||..||.+||++.+++++
T Consensus 210 ~slG~il~el~~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 210 WSFGVVLWEIFSYGLQPYYGFSN-QEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999996 7755433 33444555555555556677899999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-28 Score=259.86 Aligned_cols=203 Identities=17% Similarity=0.163 Sum_probs=155.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....+++|||+++++|..+. .+++..+..++.||+.||+|||+.||+|+||||
T Consensus 52 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp 123 (279)
T cd06619 52 ILYKCDSPYIIGFYG-AFFV--ENRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKP 123 (279)
T ss_pred HHHhCCCCCeeeEEE-EEEE--CCEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCH
Confidence 345567888888777 4433 34679999999999997653 468899999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.++++|||++......
T Consensus 124 ~Nill~~~~~~~l~dfg~~~~~~~~------------------------------------------------------- 148 (279)
T cd06619 124 SNMLVNTRGQVKLCDFGVSTQLVNS------------------------------------------------------- 148 (279)
T ss_pred HHEEECCCCCEEEeeCCcceecccc-------------------------------------------------------
Confidence 9999999999999999998653111
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....+||..|+|||.+.+..++.++|||||||++|||++
T Consensus 149 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~ 191 (279)
T cd06619 149 -------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRF 191 (279)
T ss_pred -------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCC
Confidence 0012478899999999998889999999999999999998
Q ss_pred CCCCChhhH------hHHhhhcccCCCc-hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 268 PFSTGEEKT------RTMSSLRHRVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 268 pf~~~~~~~------~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
||....... .....+.....+. .....++.+.+++.+||+.+|.+||+++++++||||........
T Consensus 192 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 192 PYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred CchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 774322111 1111111111111 11234577899999999999999999999999999987644433
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=258.04 Aligned_cols=202 Identities=17% Similarity=0.166 Sum_probs=158.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+. .....|++|||++|++|.+++.+. ..+++..+..++.||+.||.|||++|++|+||||+
T Consensus 47 l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~ 122 (262)
T cd05572 47 LEECNHPFIVKLYR-TFK--DKKYIYMLMEYCLGGELWTILRDR-GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPE 122 (262)
T ss_pred HHhCCCCCEeeeee-eEE--cCCccEEEEecCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHH
Confidence 44557888877766 333 334689999999999999999654 45899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++++|||.++......
T Consensus 123 nilv~~~~~~~l~df~~~~~~~~~~------------------------------------------------------- 147 (262)
T cd05572 123 NLLLDSNGYVKLVDFGFAKKLKSGQ------------------------------------------------------- 147 (262)
T ss_pred HEEEcCCCCEEEeeCCcccccCccc-------------------------------------------------------
Confidence 9999999999999999986532110
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|+..|+|||.+.+..++.++|||||||++|||++ |
T Consensus 148 ------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p 191 (262)
T cd05572 148 ------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPP 191 (262)
T ss_pred ------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCC
Confidence 0011367888999999988889999999999999999999 7
Q ss_pred CCCCh--hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCC
Q 002801 269 FSTGE--EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 328 (879)
Q Consensus 269 f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~ 328 (879)
|.... ..............++.+...++.+.+++.+||..+|.+||+ +.|+++||||++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 192 FGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred cCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 75544 222222222212222233334678999999999999999999 9999999999865
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=267.78 Aligned_cols=199 Identities=16% Similarity=0.111 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|+|++..++ .|... ..++++||+.+|+|.+++.+....+++..++.++.||+.||+|||++||+||||||
T Consensus 62 ~l~~l~h~niv~~~g-~~~~~---~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp 137 (316)
T cd05108 62 VMASVDNPHVCRLLG-ICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAA 137 (316)
T ss_pred HHHhCCCCCCCeEEE-EEcCC---CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccch
Confidence 455567888888776 66543 57899999999999999977656789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.........
T Consensus 138 ~Nill~~~~~~kl~DfG~a~~~~~~~~~~--------------------------------------------------- 166 (316)
T cd05108 138 RNVLVKTPQHVKITDFGLAKLLGADEKEY--------------------------------------------------- 166 (316)
T ss_pred hheEecCCCcEEEccccccccccCCCcce---------------------------------------------------
Confidence 99999999999999999997642210000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||++.+..++.++|||||||+||||++
T Consensus 167 -------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~ 209 (316)
T cd05108 167 -------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 209 (316)
T ss_pred -------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCC
Confidence 0001133667999999999899999999999999999986
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||... ........+.....++....+...+..++.+||..+|.+||++.+++.+
T Consensus 210 ~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 210 KPYDGI-PASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred CCCCCC-CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 65433 2223333334443444445566788999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-28 Score=264.56 Aligned_cols=201 Identities=16% Similarity=0.192 Sum_probs=151.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+...+|++++..++ .+.+ ....|+||||+. ++|.+++... ...+++..++.++.||+.||+|||++||+||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl 127 (285)
T cd07861 52 LLKELQHPNIVCLQD-VLMQ--ESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDL 127 (285)
T ss_pred HHHhcCCCCEeeeEE-EEee--CCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCC
Confidence 344456888877776 4443 346899999997 5898888442 256899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+||+|||++...+.+..
T Consensus 128 ~p~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 156 (285)
T cd07861 128 KPQNLLIDNKGVIKLADFGLARAFGIPVR--------------------------------------------------- 156 (285)
T ss_pred CHHHEEEcCCCcEEECcccceeecCCCcc---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~ 267 (879)
......+++.|+|||.+.+. .++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t 197 (285)
T cd07861 157 ---------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT 197 (285)
T ss_pred ---------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHH
Confidence 00123668899999998764 47999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcc---------------------------cCCCchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 ---PFSTGEEKTRTMSSLRH---------------------------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||............... ..........++++.++|.+||..||.+|||+.
T Consensus 198 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ 277 (285)
T cd07861 198 KKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAK 277 (285)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHH
Confidence 66543322222111110 000011223567788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
+++.||||
T Consensus 278 ~ll~~~~~ 285 (285)
T cd07861 278 KALNHPYF 285 (285)
T ss_pred HHhcCCCC
Confidence 99999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-28 Score=257.40 Aligned_cols=188 Identities=16% Similarity=0.098 Sum_probs=145.7
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
..|++++..+. .+.+ ....|++|||+.|++|.+++.+. ..+++.++..++.||+.||+|||++||+||||||+||+
T Consensus 42 ~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil 117 (237)
T cd05576 42 HCVPNMVCLHK-YIVS--EDSVFLVLQHAEGGKLWSHISKF-LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNIL 117 (237)
T ss_pred cCCCceeehhh-heec--CCeEEEEEecCCCCCHHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEE
Confidence 35677776666 3332 34689999999999999999554 45899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.++++|||.+......
T Consensus 118 ~~~~~~~~l~df~~~~~~~~~----------------------------------------------------------- 138 (237)
T cd05576 118 LDDRGHIQLTYFSRWSEVEDS----------------------------------------------------------- 138 (237)
T ss_pred EcCCCCEEEecccchhccccc-----------------------------------------------------------
Confidence 999999999999987543110
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 271 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~ 271 (879)
.....++..|+|||.+.+..++.++||||+||++|||++ |+..
T Consensus 139 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~ 184 (237)
T cd05576 139 ----------------------------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVEC 184 (237)
T ss_pred ----------------------------------cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhc
Confidence 001234667999999988889999999999999999998 3321
Q ss_pred ChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH-----HHHhhcccc
Q 002801 272 GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 325 (879)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~-----~evl~hp~~ 325 (879)
.... . ............++.+.++|.+||+.||++||++ ++++.||||
T Consensus 185 ~~~~---~---~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 185 HPSG---I---NTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred Cchh---c---ccccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 1110 0 0000011112345778999999999999999996 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=261.30 Aligned_cols=200 Identities=17% Similarity=0.151 Sum_probs=154.3
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
+.+|++++..+. .+.+ ....|+||||+.|++|.+++.+. ..+++.+++.|+.|++.||.|||++||+||||||+||
T Consensus 53 ~~~~~~i~~~~~-~~~~--~~~~~~v~e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~ni 128 (278)
T cd05606 53 TGDCPFIVCMSY-AFHT--PDKLSFILDLMNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANI 128 (278)
T ss_pred hCCCCcEeeeee-eeec--CCEEEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHE
Confidence 356777766555 3332 34689999999999999999654 5689999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
+++.++.+|++|||++......
T Consensus 129 li~~~~~~kl~dfg~~~~~~~~---------------------------------------------------------- 150 (278)
T cd05606 129 LLDEHGHVRISDLGLACDFSKK---------------------------------------------------------- 150 (278)
T ss_pred EECCCCCEEEccCcCccccCcc----------------------------------------------------------
Confidence 9999999999999998653110
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---CC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PF 269 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~---pf 269 (879)
......|+..|+|||.+.+. .++.++||||+||++|||++ ||
T Consensus 151 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~ 196 (278)
T cd05606 151 ----------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 196 (278)
T ss_pred ----------------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCC
Confidence 00113678899999999754 58999999999999999998 77
Q ss_pred CCChhhH-hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 270 STGEEKT-RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 270 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
....... ...........++.+...++.+.+++.+||..+|.+|| ++.++++||||....
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 197 RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 5432111 11111111112222234568899999999999999999 999999999998754
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=261.69 Aligned_cols=199 Identities=14% Similarity=0.116 Sum_probs=151.1
Q ss_pred ccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 36 DHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
+|++++..++ ++... ....+|++|||++|++|.++++. ....+++..++.++.||+.||.|||++||+|||||
T Consensus 77 ~h~ni~~~~~-~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk 155 (291)
T cd06639 77 NHPNVVKFYG-MFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVK 155 (291)
T ss_pred CCCCeEEEEE-EEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 5777776655 44322 23468999999999999998842 33568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++........
T Consensus 156 p~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------------- 184 (291)
T cd06639 156 GNNILLTTEGGVKLVDFGVSAQLTSTRLR--------------------------------------------------- 184 (291)
T ss_pred HHHEEEcCCCCEEEeecccchhccccccc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-----CCCccCcchhHHHHHHH
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASDIYRLGVLLFE 264 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sDIwSlGvil~e 264 (879)
.....|+..|+|||.+... .++.++|||||||++||
T Consensus 185 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~e 225 (291)
T cd06639 185 ---------------------------------------RNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIE 225 (291)
T ss_pred ---------------------------------------ccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHH
Confidence 0113578889999998643 26899999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
|++ ||............ .....+. ........+.+||.+||..+|++||++.++++||||+
T Consensus 226 l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 226 LGDGDPPLFDMHPVKTLFKI-PRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HhhCCCCCCCCcHHHHHHHH-hcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 998 77554433333322 2221111 1223446788999999999999999999999999984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-26 Score=261.36 Aligned_cols=290 Identities=19% Similarity=0.313 Sum_probs=238.3
Q ss_pred CCCCCEEEEEEcCCCCEEEEEe--CCCcEEEEecCcccCcCc----ccccceEE-eccCCCeeEEEEeCCCCCeEEEeeC
Q 002801 566 NSSNLVCSLSFDRDGELFAAAG--VNKKIKVFECDAIINENR----DIHYPVVE-MASRSKLSSICWNSYIKSQIASSNF 638 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~--~dg~I~iwd~~~~~~~~~----~~~~~~~~-~~~~~~i~~l~~~~~~~~~l~s~~~ 638 (879)
++...|.+|+.+|||..||||| .|+.+.||+.+....+.. ..+..+.. ..|.+.|+|+.|++ ++.+||+|+.
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~-dG~~lAsGSD 89 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP-DGSYLASGSD 89 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECC-CCCeEeeccC
Confidence 4456799999999999999999 999999999887543221 12333333 35889999999999 4999999999
Q ss_pred CCcEEEEEcCC------------------CeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 002801 639 EGVVQVWDVSR------------------SQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 700 (879)
Q Consensus 639 dg~V~vwd~~~------------------~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~ 700 (879)
|+.|.||.... .+++..+.+|...|..++|+| ++.+||++|.|++|.|||..+.+.+.++.
T Consensus 90 D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~ 168 (942)
T KOG0973|consen 90 DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLR 168 (942)
T ss_pred cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEEEEccccceeeeeee
Confidence 99999998762 236777889999999999999 99999999999999999999999998888
Q ss_pred c-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC------CCCEEEEEEc-CCCEEEEEE----cCCc
Q 002801 701 T-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH------NKTVSYVKFV-DATTLVSAS----TDNT 768 (879)
Q Consensus 701 ~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h------~~~V~~v~fs-~~~~l~s~s----~D~~ 768 (879)
. .+.|-.+.|+|- |+|||+-+.|++|++|.+.+... .+.+.++ ..-+..+.|+ ||++|+++- .-.+
T Consensus 169 ~H~s~VKGvs~DP~-Gky~ASqsdDrtikvwrt~dw~i-~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~ 246 (942)
T KOG0973|consen 169 GHQSLVKGVSWDPI-GKYFASQSDDRTLKVWRTSDWGI-EKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKST 246 (942)
T ss_pred cccccccceEECCc-cCeeeeecCCceEEEEEccccee-eEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcce
Confidence 5 566999999999 99999999999999999877553 4444333 2357889999 999999864 2346
Q ss_pred EEEEecCCCcccccCCceEEEeCCCCcEEEEEEecC-----CC------------EEEEEeCCCcEEEEecCCCCCceec
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVW-----DG------------YVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~-----~~------------~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
+.|.+-.+. +.-..|-||..++.++.|+|. .. .+|+||.|++|.||.....+|+...
T Consensus 247 ~~IieR~tW------k~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi 320 (942)
T KOG0973|consen 247 IAIIERGTW------KVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVI 320 (942)
T ss_pred eEEEecCCc------eeeeeeecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhh
Confidence 778776554 556788999999999999982 11 6789999999999999999988765
Q ss_pred ccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 832 NFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 832 ~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
. . --...|..++|+|||- .|.+|+.||+|.++.+
T Consensus 321 ~-----~-------lf~~SI~DmsWspdG~-~LfacS~DGtV~~i~F 354 (942)
T KOG0973|consen 321 H-----N-------LFNKSIVDMSWSPDGF-SLFACSLDGTVALIHF 354 (942)
T ss_pred h-----h-------hhcCceeeeeEcCCCC-eEEEEecCCeEEEEEc
Confidence 4 1 1134699999999999 9999999999999864
|
|
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-28 Score=260.42 Aligned_cols=198 Identities=15% Similarity=0.160 Sum_probs=149.8
Q ss_pred ccccCCCCCCccccc---ccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 36 DHLRNQGGLSGVCEN---EAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~---~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
+|++++..++ .+.. +....+|++|||++|++|.+++. .....+++..+..++.||+.||.|||+++|+|||||
T Consensus 73 ~h~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 151 (286)
T cd06638 73 DHPNVVKFYG-MYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVK 151 (286)
T ss_pred cCCCeeeeee-eeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 6788877666 3321 23446899999999999999874 233568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++.......
T Consensus 152 p~nili~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------------- 179 (286)
T cd06638 152 GNNILLTTEGGVKLVDFGVSAQLTSTRL---------------------------------------------------- 179 (286)
T ss_pred HHhEEECCCCCEEEccCCceeecccCCC----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHHH
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLFE 264 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~e 264 (879)
......|++.|+|||.+.. ..++.++|||||||++||
T Consensus 180 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~e 221 (286)
T cd06638 180 --------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIE 221 (286)
T ss_pred --------------------------------------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHH
Confidence 0012367899999999853 447899999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
|++ ||........... ......+. ........+.+|+.+||+.||.+||++.|+++|+||
T Consensus 222 l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 222 LGDGDPPLADLHPMRALFK-IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred HhcCCCCCCCCchhHHHhh-ccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 998 6654433222222 22221111 111234678899999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-28 Score=264.54 Aligned_cols=204 Identities=18% Similarity=0.263 Sum_probs=158.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .+...|++|||+++++|..++.. ..+++..++.++.||+.||+|||++||+||||||
T Consensus 71 ~l~~l~hp~i~~~~~-~~~--~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p 145 (297)
T cd06659 71 IMRDYQHQNVVEMYK-SYL--VGEELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKS 145 (297)
T ss_pred HHHhCCCCchhhhhh-hee--eCCeEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 445567787777666 333 24568999999999999998854 3589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||+++.......
T Consensus 146 ~Nill~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------------- 172 (297)
T cd06659 146 DSILLTLDGRVKLSDFGFCAQISKDVP----------------------------------------------------- 172 (297)
T ss_pred HHeEEccCCcEEEeechhHhhcccccc-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 173 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~ 215 (297)
T cd06659 173 -------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEP 215 (297)
T ss_pred -------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence 0012467899999999998889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCC--CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 268 PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
||...... ..+..+..... .......++.+.+++.+||..+|.+||++.++++||||.....
T Consensus 216 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 216 PYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred CCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 77644332 22223322211 1222345567889999999999999999999999999986543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-28 Score=262.20 Aligned_cols=201 Identities=24% Similarity=0.353 Sum_probs=153.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+..|++++..+. +..+ ....|++||++.+++|.++|. ....+++.+++.++.||++||++||++||+|+||||
T Consensus 51 ~~~~l~~~~i~~~~~-~~~~--~~~~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp 126 (260)
T PF00069_consen 51 ILRRLRHPNIVQILD-VFQD--DNYLYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKP 126 (260)
T ss_dssp HHHHHTBTTBCHEEE-EEEE--SSEEEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSG
T ss_pred ccccccccccccccc-cccc--ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 344456777776655 4433 556799999999999999996 235789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||.+........
T Consensus 127 ~NIl~~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 153 (260)
T PF00069_consen 127 ENILLDENGEVKLIDFGSSVKLSENNE----------------------------------------------------- 153 (260)
T ss_dssp GGEEESTTSEEEESSGTTTEESTSTTS-----------------------------------------------------
T ss_pred ccccccccccccccccccccccccccc-----------------------------------------------------
Confidence 999999999999999999864200000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-CCCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......+|..|+|||++. +..++.++||||||+++|+|++
T Consensus 154 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~ 196 (260)
T PF00069_consen 154 -------------------------------------NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGK 196 (260)
T ss_dssp -------------------------------------EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 012247799999999998 7779999999999999999999
Q ss_pred -CCCCCh--hhHhHHhhhcccCCCchhh---ccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGE--EKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||.... ..............+.... ...+.+.+++.+||+.||++||++.++++||||
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 197 LPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp SSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred cccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 776551 1122222111111111111 112678899999999999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=265.16 Aligned_cols=209 Identities=17% Similarity=0.178 Sum_probs=155.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.++.....|+||||+.+ +|.+++......+++.+++.++.||+.||.|||++||+||||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p 136 (309)
T cd07845 59 LLLNLRHPNIVELKE-VVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKV 136 (309)
T ss_pred HHHhCCCCCCcceEE-EEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 344567888777665 4444444567999999964 89998866556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||++........
T Consensus 137 ~nil~~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------------- 163 (309)
T cd07845 137 SNLLLTDKGCLKIADFGLARTYGLPAK----------------------------------------------------- 163 (309)
T ss_pred HHEEECCCCCEEECccceeeecCCccC-----------------------------------------------------
Confidence 999999999999999999866421100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
..+...++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 164 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~ 206 (309)
T cd07845 164 -------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHK 206 (309)
T ss_pred -------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCC
Confidence 0011245788999999876 448999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcc--------------------cCCCc--------hhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLRH--------------------RVLPP--------QLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~--------------------~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||............... ...+. .....++.+.+||.+||+.||++|||+.+
T Consensus 207 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~ 286 (309)
T cd07845 207 PLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEE 286 (309)
T ss_pred CCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHH
Confidence 66443332222111110 00000 01123567889999999999999999999
Q ss_pred HhhcccccCCcCc
Q 002801 319 LLQSEFLNEPRDS 331 (879)
Q Consensus 319 vl~hp~~~~~~~~ 331 (879)
+++||||.....+
T Consensus 287 il~h~~f~~~~~~ 299 (309)
T cd07845 287 ALESSYFKEKPLP 299 (309)
T ss_pred HhcChhhccCCCC
Confidence 9999999865444
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.3e-28 Score=257.11 Aligned_cols=197 Identities=15% Similarity=0.206 Sum_probs=155.5
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
..+|++++..++ .+. ....+|++|||+.|++|.++++.. ..+++..+..++.||+.||.|||+.||+|+||+|+||
T Consensus 53 ~~~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~ni 128 (260)
T cd05611 53 QGESPYVAKLYY-SFQ--SKDYLYLVMEYLNGGDCASLIKTL-GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENL 128 (260)
T ss_pred cCCCCCeeeeee-eEE--cCCeEEEEEeccCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHe
Confidence 347788877776 443 244689999999999999999654 4689999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
+++.++.++++|||+++.....
T Consensus 129 l~~~~~~~~l~dfg~~~~~~~~---------------------------------------------------------- 150 (260)
T cd05611 129 LIDQTGHLKLTDFGLSRNGLEN---------------------------------------------------------- 150 (260)
T ss_pred EECCCCcEEEeecccceecccc----------------------------------------------------------
Confidence 9999999999999988542100
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
....|+..|+|||.+.+..++.++|||||||+||||++ ||.
T Consensus 151 ------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~ 194 (260)
T cd05611 151 ------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFH 194 (260)
T ss_pred ------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCC
Confidence 11356888999999988889999999999999999998 775
Q ss_pred CChhhHhHHhhhccc--CCC-chhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCc
Q 002801 271 TGEEKTRTMSSLRHR--VLP-PQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~ 329 (879)
..... .....+... ..+ ......++.+.+++.+||..+|++||+ ++|++.||||....
T Consensus 195 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~ 258 (260)
T cd05611 195 AETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258 (260)
T ss_pred CCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCC
Confidence 44332 222222211 112 222245678899999999999999995 47999999997653
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-26 Score=257.71 Aligned_cols=271 Identities=23% Similarity=0.319 Sum_probs=236.1
Q ss_pred CCceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceE
Q 002801 533 RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV 612 (879)
Q Consensus 533 ~~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~ 612 (879)
.+.+++++.+.++++|+..++..... .+.||.+.|.+++|..-+.++++|+.|++++|||+.++... ..
T Consensus 218 ~~~~~~~s~~~tl~~~~~~~~~~i~~----~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~-------~~ 286 (537)
T KOG0274|consen 218 DGFFKSGSDDSTLHLWDLNNGYLILT----RLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT-------HS 286 (537)
T ss_pred cCeEEecCCCceeEEeecccceEEEe----eccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE-------EE
Confidence 34568999999999999998877755 23499999999999887889999999999999998875442 23
Q ss_pred EeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 002801 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 613 ~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~ 692 (879)
...|.+.|.|+... +..+++|+.|.+|++|++++++++..+.+|..+|.+|.++ +.++++|+.|++|++||+.+
T Consensus 287 l~gh~stv~~~~~~---~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~---~~~lvsgs~d~~v~VW~~~~ 360 (537)
T KOG0274|consen 287 LQGHTSSVRCLTID---PFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD---EPLLVSGSYDGTVKVWDPRT 360 (537)
T ss_pred ecCCCceEEEEEcc---CceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec---CCEEEEEecCceEEEEEhhh
Confidence 34688999999875 5678889999999999999999999999999999999996 68999999999999999999
Q ss_pred CceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEE
Q 002801 693 GVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKL 771 (879)
Q Consensus 693 ~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~l 771 (879)
++++.++.. ...|.++.+.+. ..+++|+.|++|++||+++...++.++.+|...|+.+.+ .++.|++++.|++|++
T Consensus 361 ~~cl~sl~gH~~~V~sl~~~~~--~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~-~~~~Lvs~~aD~~Ik~ 437 (537)
T KOG0274|consen 361 GKCLKSLSGHTGRVYSLIVDSE--NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL-RDNFLVSSSADGTIKL 437 (537)
T ss_pred ceeeeeecCCcceEEEEEecCc--ceEEeeeeccceEeecCCchhhhhhhhcCCccccccccc-ccceeEeccccccEEE
Confidence 999999985 566999988753 689999999999999999993369999999999877665 5889999999999999
Q ss_pred EecCCCcccccCCceEEEeC-CCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceec
Q 002801 772 WDLSMCTSRVIDTPLHSFTG-HTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
||...+ .+++.+.+ |...|.++++. ...+++++.|+++++||+..++....+
T Consensus 438 WD~~~~------~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 438 WDAEEG------ECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred eecccC------ceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence 999987 78899988 67888888876 568999999999999999998877755
|
|
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=265.57 Aligned_cols=201 Identities=19% Similarity=0.184 Sum_probs=154.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
.+.+..|++++..++ .+.+ ...+|++|||++|++|.+++++. ..+++..+..++.||+.||+|||+ .||+|||||
T Consensus 52 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~ 127 (308)
T cd06615 52 VLHECNSPYIVGFYG-AFYS--DGEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVK 127 (308)
T ss_pred HHHhCCCCCCCeEEE-EEee--CCEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCC
Confidence 445567888888776 4443 34689999999999999999655 568999999999999999999998 599999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+|++|||++......
T Consensus 128 p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------------ 153 (308)
T cd06615 128 PSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------------ 153 (308)
T ss_pred hHHEEEecCCcEEEccCCCccccccc------------------------------------------------------
Confidence 99999999999999999988542100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 154 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 195 (308)
T cd06615 154 --------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGR 195 (308)
T ss_pred --------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCC
Confidence 0012367889999999988889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhccc-----------------------------------CCCchh--hccChhhHHHHHHhcCCC
Q 002801 268 -PFSTGEEKTRTMSSLRHR-----------------------------------VLPPQL--LLKFPKEASFCLWLLHPE 309 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~-----------------------------------~~~~~~--~~~~~~~~~li~~~L~~d 309 (879)
||..... ......+... ..++.. ...++.+.+|+.+||..+
T Consensus 196 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 274 (308)
T cd06615 196 YPIPPPDA-KELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKN 274 (308)
T ss_pred CCCCCcch-hhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCC
Confidence 6643321 1111111000 000000 123567889999999999
Q ss_pred CCCCCCHHHHhhcccccCC
Q 002801 310 PSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 310 P~~Rpt~~evl~hp~~~~~ 328 (879)
|++||++.++++||||...
T Consensus 275 P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 275 PKERADLKELTKHPFIKRA 293 (308)
T ss_pred hhhCcCHHHHhcChhhhhc
Confidence 9999999999999999753
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-29 Score=265.45 Aligned_cols=234 Identities=18% Similarity=0.189 Sum_probs=184.0
Q ss_pred cccccccccCCCCC------cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCC
Q 002801 7 RGERFGVRGDDSND------FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (879)
Q Consensus 7 ~~~~~~~~~~~~~~------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~ 80 (879)
.|..++++--+..+ +..|.|... +-...||-+|.+-+ -.|.....|+|||-+.|.-|.=.|....+.|+
T Consensus 588 tGrdVAvKvIdKlrFp~kqesqlR~EVaI--Lq~l~HPGiV~le~---M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~ 662 (888)
T KOG4236|consen 588 TGRDVAVKVIDKLRFPTKQESQLRNEVAI--LQNLHHPGIVNLEC---MFETPERVFVVMEKLHGDMLEMILSSEKGRLP 662 (888)
T ss_pred cCceeeeeeeecccCCCchHHHHHHHHHH--HHhcCCCCeeEEEE---eecCCceEEEEehhhcchHHHHHHHhhcccch
Confidence 35556665443332 333544443 33455666655444 34566788999999966555555666678899
Q ss_pred hhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeec---cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcc
Q 002801 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 81 ~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~---~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
+...+.++.||+.||.|||-++|||+||||+||||. +.-++||||||.|+.++..+..
T Consensus 663 er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFR------------------- 723 (888)
T KOG4236|consen 663 ERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFR------------------- 723 (888)
T ss_pred HHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhh-------------------
Confidence 999999999999999999999999999999999995 4568999999999886443211
Q ss_pred hhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccc
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
...+|||.
T Consensus 724 ------------------------------------------------------------------------rsVVGTPA 731 (888)
T KOG4236|consen 724 ------------------------------------------------------------------------RSVVGTPA 731 (888)
T ss_pred ------------------------------------------------------------------------hhhcCCcc
Confidence 33699999
Q ss_pred eeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314 (879)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (879)
|.|||+++...|+.+-|+||.|||+|--|. ||...++....+....--..|..|.+.++.+.+||..+|+..-.+|-
T Consensus 732 YLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRy 811 (888)
T KOG4236|consen 732 YLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRY 811 (888)
T ss_pred ccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999998887 88776666666665555566778889999999999999999999999
Q ss_pred CHHHHhhcccccCCcCchHHHH
Q 002801 315 KMGELLQSEFLNEPRDSMEERE 336 (879)
Q Consensus 315 t~~evl~hp~~~~~~~~~~e~~ 336 (879)
+.++.|.|||++..+.-+..++
T Consensus 812 svdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 812 SVDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred chHhhccchhhhcchHHHHHHH
Confidence 9999999999998766555443
|
|
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=257.61 Aligned_cols=201 Identities=16% Similarity=0.173 Sum_probs=156.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ... ....+|++|||+.+++|.+++......+++.+++.++.|++.||.|||++||+|+||||
T Consensus 53 ~l~~~~h~~i~~~~~-~~~--~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p 129 (262)
T cd06613 53 MLKECRHPNIVAYFG-SYL--RRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKG 129 (262)
T ss_pred HHHhCCCCChhceEE-EEE--eCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCCh
Confidence 455668888888776 333 24468999999999999999976656799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||++........
T Consensus 130 ~ni~i~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------------- 156 (262)
T cd06613 130 ANILLTEDGDVKLADFGVSAQLTATIA----------------------------------------------------- 156 (262)
T ss_pred hhEEECCCCCEEECccccchhhhhhhh-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC---CCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||.+.+. .++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~t 199 (262)
T cd06613 157 -------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAE 199 (262)
T ss_pred -------------------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHh
Confidence 00124678899999999877 78999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCc---hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPP---QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
||..................++ .....+..+.+++.+||..+|..|||+.+++.|+|
T Consensus 200 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 200 LQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred CCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 6654433222222212211111 12233467889999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.4e-28 Score=260.46 Aligned_cols=200 Identities=16% Similarity=0.108 Sum_probs=159.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+..|++++..++ .+. ....+|++|||+.+++|.+++.+. ..+++..+..++.||+.||.|||++||+|+||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~--~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p 129 (290)
T cd05580 54 ILQSIRHPFLVNLYG-SFQ--DDSNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKP 129 (290)
T ss_pred HHHhCCCCCccceee-EEE--cCCeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCH
Confidence 345556888887766 333 344689999999999999999665 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||+++.....
T Consensus 130 ~nili~~~~~~kl~dfg~~~~~~~~------------------------------------------------------- 154 (290)
T cd05580 130 ENLLLDSDGYIKITDFGFAKRVKGR------------------------------------------------------- 154 (290)
T ss_pred HHEEECCCCCEEEeeCCCccccCCC-------------------------------------------------------
Confidence 9999999999999999998653111
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....|++.|+|||.+.+..++.++|||||||++|+|++
T Consensus 155 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 196 (290)
T cd05580 155 --------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYP 196 (290)
T ss_pred --------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCC
Confidence 011367889999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||............. ... ++.....++.+.+++.+||..||.+|+ +++++++||||....
T Consensus 197 p~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 197 PFFDDNPIQIYEKIL-EGK-VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred CCCCCCHHHHHHHHh-cCC-ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 775544322222222 221 222234467889999999999999999 899999999998654
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-28 Score=283.06 Aligned_cols=208 Identities=15% Similarity=0.184 Sum_probs=150.5
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----CCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+...+.+.+|+|++..++ ++.+ ....|++|+++ +++|.+++... .......+++.|+.||+.||+|||++||
T Consensus 213 Ei~il~~l~HpnIv~l~~-~~~~--~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gI 288 (501)
T PHA03210 213 EILALGRLNHENILKIEE-ILRS--EANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKL 288 (501)
T ss_pred HHHHHHhCCCCCcCcEeE-EEEE--CCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCe
Confidence 344556678999988777 5543 34579999998 45777776322 1223466788999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
|||||||+||||+.++.+||+|||+++.+......
T Consensus 289 iHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------------------- 323 (501)
T PHA03210 289 IHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA--------------------------------------------- 323 (501)
T ss_pred ecCCCCHHHEEECCCCCEEEEeCCCceecCccccc---------------------------------------------
Confidence 99999999999999999999999999764211000
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
.....+||..|+|||++.+..++.++|||||||+||
T Consensus 324 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 359 (501)
T PHA03210 324 --------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL 359 (501)
T ss_pred --------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence 001247899999999999999999999999999999
Q ss_pred Hhhc----CCCCCh--hhHhHHhhhcc-----cCCC-----------------------chh--hccChhhHHHHHHhcC
Q 002801 264 ELFC----PFSTGE--EKTRTMSSLRH-----RVLP-----------------------PQL--LLKFPKEASFCLWLLH 307 (879)
Q Consensus 264 ell~----pf~~~~--~~~~~~~~~~~-----~~~~-----------------------~~~--~~~~~~~~~li~~~L~ 307 (879)
||++ |+.... ........+.. ..++ +.. ......+.++|.+||.
T Consensus 360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~ 439 (501)
T PHA03210 360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT 439 (501)
T ss_pred HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence 9998 332211 11111111110 0000 000 1123456788999999
Q ss_pred CCCCCCCCHHHHhhcccccCC
Q 002801 308 PEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 308 ~dP~~Rpt~~evl~hp~~~~~ 328 (879)
.||.+|||+.|+|.||||...
T Consensus 440 ~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 440 FDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred cCcccCcCHHHHhhChhhhcC
Confidence 999999999999999999753
|
|
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=257.48 Aligned_cols=197 Identities=17% Similarity=0.144 Sum_probs=152.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+...+|++++..++ .|.. ....|++|||+++++|.+++... ...+++..++.++.|++.||.|||++||+||||||
T Consensus 56 l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp 132 (263)
T cd05052 56 MKEIKHPNLVQLLG-VCTR--EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAA 132 (263)
T ss_pred HHhCCCCChhheEE-EEcC--CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCc
Confidence 34457788877776 4443 34679999999999999999543 34689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 133 ~nil~~~~~~~kl~df~~~~~~~~~~~~---------------------------------------------------- 160 (263)
T cd05052 133 RNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------------- 160 (263)
T ss_pred ceEEEcCCCcEEeCCCccccccccceee----------------------------------------------------
Confidence 9999999999999999998653211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 161 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~ 203 (263)
T cd05052 161 -------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 203 (263)
T ss_pred -------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence 0001133567999999988889999999999999999996
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||... ........+.....++.....++.+.+++.+||..+|++||++.++++
T Consensus 204 ~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 204 SPYPGI-DLSQVYELLEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred CCCCCC-CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 55433 333333444444344444556788999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=257.70 Aligned_cols=195 Identities=15% Similarity=0.107 Sum_probs=149.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+....|++++..++ .+. +.....|++|||+++++|.+++++.. ..+++..++.++.||+.||+|||++||+|||||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~-~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 129 (256)
T cd05082 52 VMTQLRHSNLVQLLG-VIV-EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLA 129 (256)
T ss_pred HHHhCCCCCeeeEEE-EEE-cCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccc
Confidence 344557777777665 322 23346799999999999999996543 347899999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++......
T Consensus 130 p~nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------------- 156 (256)
T cd05082 130 ARNVLVSEDNVAKVSDFGLTKEASSTQ----------------------------------------------------- 156 (256)
T ss_pred hheEEEcCCCcEEecCCccceeccccC-----------------------------------------------------
Confidence 999999999999999999986431100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
....++..|+|||++.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g 196 (256)
T cd05082 157 ----------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred ----------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCC
Confidence 01123557999999988889999999999999999986
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....+......++.+.+++.+||..+|++|||+.++++
T Consensus 197 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 197 RVPYPRIPL-KDVVPRVEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred CCCCCCCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6644322 2233333333333333456678899999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=238.86 Aligned_cols=290 Identities=18% Similarity=0.261 Sum_probs=232.5
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCccc--------c-cceEE--eccCCCeeEEEEeCCCCCeEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDI--------H-YPVVE--MASRSKLSSICWNSYIKSQIA 634 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~--------~-~~~~~--~~~~~~i~~l~~~~~~~~~l~ 634 (879)
.|.-.|++++++||+++.++++.+++|.=|++.++....... + .+... -.|...+.+++.++ ++.+|+
T Consensus 140 ~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~-Dgkyla 218 (479)
T KOG0299|consen 140 KHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSS-DGKYLA 218 (479)
T ss_pred cccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcC-CCcEEE
Confidence 677899999999999999999999999999998754331111 1 11111 25778899999998 599999
Q ss_pred EeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceEEEEeeCC
Q 002801 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLD 713 (879)
Q Consensus 635 s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~ 713 (879)
+|+.|..|.|||..+.+.+..+.+|.+.|.+++|-. ..+.+.+++.|.+|++|++.....+.++. |++.|..|.-..-
T Consensus 219 tgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~-gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~r 297 (479)
T KOG0299|consen 219 TGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRK-GTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSR 297 (479)
T ss_pred ecCCCceEEEecCcccchhhcccccccceeeeeeec-CccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcc
Confidence 999999999999999999999999999999999987 78899999999999999999887776665 5677988887766
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEe-C-
Q 002801 714 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT-G- 791 (879)
Q Consensus 714 ~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~-~- 791 (879)
.+.+.+|+.|.++++|++.... ...|.+|.+.+-|++|.+...++|||.+|.|.+|++... +|+.+.. .
T Consensus 298 -eR~vtVGgrDrT~rlwKi~ees--qlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KK------kplf~~~~AH 368 (479)
T KOG0299|consen 298 -ERCVTVGGRDRTVRLWKIPEES--QLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKK------KPLFTSRLAH 368 (479)
T ss_pred -cceEEeccccceeEEEeccccc--eeeeeCCCCCeeeEEEecccceeeccCCceEEEeeeccc------CceeEeeccc
Confidence 7788888899999999995444 567889999999999999999999999999999999886 4444332 1
Q ss_pred ----------CCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCC
Q 002801 792 ----------HTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSS 861 (879)
Q Consensus 792 ----------h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 861 (879)
+..+|++|+..|...++|+||.+|.|++|-+..+-....+-+. -.-.++|++++|+++|.
T Consensus 369 gv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~----------ls~~GfVNsl~f~~sgk 438 (479)
T KOG0299|consen 369 GVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYS----------LSLVGFVNSLAFSNSGK 438 (479)
T ss_pred cccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeee----------cccccEEEEEEEccCCC
Confidence 2238999999999999999999999999999876321111100 11267899999999999
Q ss_pred cEEEEEeCCCcEEEE
Q 002801 862 NTLVAANSSGNIKIL 876 (879)
Q Consensus 862 ~~l~s~~~Dg~I~vw 876 (879)
..+|.+|....+--|
T Consensus 439 ~ivagiGkEhRlGRW 453 (479)
T KOG0299|consen 439 RIVAGIGKEHRLGRW 453 (479)
T ss_pred EEEEeccccccccee
Confidence 344444444433333
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-28 Score=259.06 Aligned_cols=206 Identities=14% Similarity=0.137 Sum_probs=159.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--CCCCChhHHHHHHHHHHHHHHhhhh-cCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrD 107 (879)
.+...+|++++..++ .+.. ....|++|||++|++|.+++... ...+++..++.++.||+.||.|||+ .||+|+|
T Consensus 52 ~l~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~d 128 (286)
T cd06622 52 ILHKAVSPYIVDFYG-AFFI--EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRD 128 (286)
T ss_pred HHHhcCCCcHHhhhh-heec--CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCC
Confidence 345567888877776 3332 45789999999999999998653 2368999999999999999999997 5999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.+|++|||++.......
T Consensus 129 l~p~nil~~~~~~~~l~dfg~~~~~~~~~--------------------------------------------------- 157 (286)
T cd06622 129 VKPTNVLVNGNGQVKLCDFGVSGNLVASL--------------------------------------------------- 157 (286)
T ss_pred CCHHHEEECCCCCEEEeecCCcccccCCc---------------------------------------------------
Confidence 99999999999999999999986531110
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC------CCCccCcchhHHHH
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------PVSCASDIYRLGVL 261 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~~~~sDIwSlGvi 261 (879)
.....|++.|+|||.+.+. .++.++|||||||+
T Consensus 158 -----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 196 (286)
T cd06622 158 -----------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLS 196 (286)
T ss_pred -----------------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHH
Confidence 0112567889999998653 35889999999999
Q ss_pred HHHhhc---CCCCChhhH--hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 262 LFELFC---PFSTGEEKT--RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 262 l~ell~---pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
+|||++ ||....... ..+..+.....+..+...++.+.+|+.+||..+|.+||++.++++||||......
T Consensus 197 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~ 271 (286)
T cd06622 197 ILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271 (286)
T ss_pred HHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCC
Confidence 999999 775433222 1222333333444444567889999999999999999999999999999765433
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=259.65 Aligned_cols=199 Identities=16% Similarity=0.150 Sum_probs=151.4
Q ss_pred ccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCC---CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 36 DHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
+|++++..++ .+.+.. ....|++|||+++++|.+++... +..+++..++.++.|++.||.|||++||+|+||
T Consensus 61 ~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l 139 (275)
T cd06608 61 NHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDI 139 (275)
T ss_pred CCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence 6788877666 443322 44579999999999999998542 357899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
+|+||+++.++.+|++|||++........
T Consensus 140 ~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 168 (275)
T cd06608 140 KGQNILLTKNAEVKLVDFGVSAQLDSTLG--------------------------------------------------- 168 (275)
T ss_pred CHHHEEEccCCeEEECCCccceecccchh---------------------------------------------------
Confidence 99999999999999999999865311100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-----CCCCccCcchhHHHHHH
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGVLLF 263 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDIwSlGvil~ 263 (879)
......|+..|+|||.+.. ..++.++|||||||+||
T Consensus 169 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~ 209 (275)
T cd06608 169 ---------------------------------------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAI 209 (275)
T ss_pred ---------------------------------------hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHH
Confidence 0012367889999998854 23788999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcccCCC-chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||++ ||................... ......+..+.+|+.+||..||.+|||+.++++|||+
T Consensus 210 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 210 ELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred HHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 9999 775443333333322221111 1112245678899999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=258.99 Aligned_cols=202 Identities=18% Similarity=0.174 Sum_probs=153.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCC--ChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l--~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+....|++++..++ .+.+ ....|++|||+.|++|.+++......+ ++..++.++.||+.||+|||++||+||||
T Consensus 58 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl 134 (268)
T cd06624 58 LHSYLKHRNIVQYLG-SDSE--NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDI 134 (268)
T ss_pred HHHhcCCCCeeeeee-eecc--CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCC
Confidence 345567888877666 4433 346899999999999999996544455 88899999999999999999999999999
Q ss_pred CCcceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 109 RPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 109 KP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||+||+++. .+.++++|||++........
T Consensus 135 ~p~nil~~~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 164 (268)
T cd06624 135 KGDNVLVNTYSGVVKISDFGTSKRLAGINP-------------------------------------------------- 164 (268)
T ss_pred CHHHEEEcCCCCeEEEecchhheecccCCC--------------------------------------------------
Confidence 999999976 67999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC--CCccCcchhHHHHHHHh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFEL 265 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvil~el 265 (879)
......|++.|+|||.+.+.. ++.++|||||||++|||
T Consensus 165 ----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l 204 (268)
T cd06624 165 ----------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEM 204 (268)
T ss_pred ----------------------------------------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHH
Confidence 001125688899999987654 78999999999999999
Q ss_pred hc---CCCCChhhHhHHhhh-cccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 266 FC---PFSTGEEKTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
++ ||.........+... .....+.......+.+.+|+.+||..+|.+|||+.++++||||
T Consensus 205 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 205 ATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 99 665433222222211 1122233334456788999999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-28 Score=270.18 Aligned_cols=213 Identities=17% Similarity=0.219 Sum_probs=156.4
Q ss_pred CceeecccccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
+...+...+|++++..++ ++... .....|++|||+. ++|.++++.. +.+++..+..++.||+.||.|||++||+
T Consensus 54 E~~~l~~l~h~ni~~~~~-~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~ 130 (337)
T cd07858 54 EIKLLRHLDHENVIAIKD-IMPPPHREAFNDVYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVL 130 (337)
T ss_pred HHHHHHhcCCCCccchHH-heecccccccCcEEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 333455567888877665 44322 1235799999995 6899998654 5799999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+||+++.++.+||+|||+++...... .
T Consensus 131 H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~---------------------------------------------- 163 (337)
T cd07858 131 HRDLKPSNLLLNANCDLKICDFGLARTTSEKG-D---------------------------------------------- 163 (337)
T ss_pred cCCCCHHHEEEcCCCCEEECcCccccccCCCc-c----------------------------------------------
Confidence 99999999999999999999999986532110 0
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ 263 (879)
......++.+|+|||.+.. ..++.++|||||||++|
T Consensus 164 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 200 (337)
T cd07858 164 -------------------------------------------FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFA 200 (337)
T ss_pred -------------------------------------------cccccccccCccChHHHhcCCCCCCcccHHHHHHHHH
Confidence 0012367889999998865 45899999999999999
Q ss_pred Hhhc---CCCCChhhHhH--Hhh------------------------hcccCC---CchhhccChhhHHHHHHhcCCCCC
Q 002801 264 ELFC---PFSTGEEKTRT--MSS------------------------LRHRVL---PPQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 264 ell~---pf~~~~~~~~~--~~~------------------------~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
+|++ ||......... ... +..... .......++.+.+|+.+||+.+|+
T Consensus 201 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 280 (337)
T cd07858 201 ELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPS 280 (337)
T ss_pred HHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChh
Confidence 9998 56432211000 000 000000 011234567788999999999999
Q ss_pred CCCCHHHHhhcccccCCcCchH
Q 002801 312 GRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 312 ~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
+|||+.++++||||.....+..
T Consensus 281 ~Rps~~ell~h~~~~~~~~~~~ 302 (337)
T cd07858 281 KRITVEEALAHPYLASLHDPSD 302 (337)
T ss_pred hccCHHHHHcCcchhhhcCccc
Confidence 9999999999999987654443
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=260.26 Aligned_cols=201 Identities=15% Similarity=0.181 Sum_probs=153.2
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+...+|++++..++ .+.+ ....|++|||+++++|.+++... ..+++..+..++.|++.||+|||+.||+|||||
T Consensus 58 ~~l~~~~h~~ii~~~~-~~~~--~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 133 (267)
T cd06646 58 FMVKECKHCNIVAYFG-SYLS--REKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIK 133 (267)
T ss_pred HHHHhcCCCCeeeeeE-EEEe--CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 3455668888887776 4433 34679999999999999998544 468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++.......
T Consensus 134 p~nill~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 161 (267)
T cd06646 134 GANILLTDNGDVKLADFGVAAKITATIA---------------------------------------------------- 161 (267)
T ss_pred HHHEEECCCCCEEECcCccceeeccccc----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhh
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell 266 (879)
......|+..|+|||.+. ...++.++|||||||++|||+
T Consensus 162 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~ 203 (267)
T cd06646 162 --------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELA 203 (267)
T ss_pred --------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHH
Confidence 001236788999999885 344788999999999999999
Q ss_pred c---CCCCChhhHhHHhhhcccCCCchh---hccChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 267 C---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
+ ||..................++.+ ...+..+.+|+.+||..+|++||+++++++|+|
T Consensus 204 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 204 ELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred hCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 8 664433222211111111122221 234578889999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=256.84 Aligned_cols=199 Identities=13% Similarity=0.098 Sum_probs=154.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ +|.. ...|++|||+++++|.+++......+++..++.++.||+.||.|||++||+||||||
T Consensus 48 ~l~~l~h~~ii~~~~-~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp 123 (257)
T cd05115 48 IMHQLDNPYIVRMIG-VCEA---EALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAA 123 (257)
T ss_pred HHHhcCCCCeEEEEE-EEcC---CCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccch
Confidence 344567788877665 5542 357999999999999999965556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++.........
T Consensus 124 ~nil~~~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------------- 152 (257)
T cd05115 124 RNVLLVNQHYAKISDFGLSKALGADDSYY--------------------------------------------------- 152 (257)
T ss_pred heEEEcCCCcEEeccCCccccccCCccce---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
...+...++..|+|||.+.+..++.++|||||||++|||++
T Consensus 153 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~ 196 (257)
T cd05115 153 ------------------------------------KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQ 196 (257)
T ss_pred ------------------------------------eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCC
Confidence 00011133567999999988889999999999999999985
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++.....++++.+++.+||..+|++||++.++++
T Consensus 197 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 197 KPYKKMK-GPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CCcCcCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 665433 33344444444444444566788999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=256.39 Aligned_cols=200 Identities=21% Similarity=0.188 Sum_probs=158.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||++|++|.+++.+. ..+++..+..++.||+.||.|||+.||+|+||||
T Consensus 55 ~l~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~ 130 (258)
T cd06632 55 LLSKLQHPNIVQYLG-TERE--EDNLYIFLELVPGGSLAKLLKKY-GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKG 130 (258)
T ss_pred HHHhcCCCCchheee-eEec--CCeEEEEEEecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 445567888887666 4433 34689999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||++.......
T Consensus 131 ~ni~~~~~~~~kl~d~~~~~~~~~~~------------------------------------------------------ 156 (258)
T cd06632 131 ANILVDTNGVVKLADFGMAKQVVEFS------------------------------------------------------ 156 (258)
T ss_pred HHEEECCCCCEEEccCccceeccccc------------------------------------------------------
Confidence 99999999999999999986531110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.... ++.++|+|||||++|+|++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~ 199 (258)
T cd06632 157 -------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGK 199 (258)
T ss_pred -------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCC
Confidence 001236788999999997766 8999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..................+.......+.+.+++.+||..+|.+||++.+++.|||+
T Consensus 200 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 200 PPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred CCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 7755443333333222233334444566888999999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-28 Score=253.83 Aligned_cols=199 Identities=15% Similarity=0.156 Sum_probs=152.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ +|.+ ....|+||||+.+++|.+++......+++.+++.++.||+.||.|||++||+||||||
T Consensus 46 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p 122 (252)
T cd05084 46 ILKQYSHPNIVRLIG-VCTQ--KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAA 122 (252)
T ss_pred HHHhCCCCCcceEEE-EEcC--CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccch
Confidence 344567888877666 5544 3468999999999999999966555689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 123 ~nil~~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------------- 150 (252)
T cd05084 123 RNCLVTEKNVLKISDFGMSREEEDGVYA---------------------------------------------------- 150 (252)
T ss_pred heEEEcCCCcEEECccccCccccccccc----------------------------------------------------
Confidence 9999999999999999998653110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 151 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~ 194 (252)
T cd05084 151 ------------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGA 194 (252)
T ss_pred ------------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCC
Confidence 00000122456999999988889999999999999999996
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++.....+..+.+|+.+||.++|++|||+.++++
T Consensus 195 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 195 VPYANLSN-QQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred CCccccCH-HHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5543322 2233333333333344455678899999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-26 Score=226.67 Aligned_cols=309 Identities=16% Similarity=0.266 Sum_probs=255.1
Q ss_pred ceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEe
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
.+++.|.++++++ ++.+ .+.||.+.|+.++......++.|++.|.+-+||.++++.+ .+...
T Consensus 126 rivssFk~~t~~~------~lvr-----e~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~C-------L~~Y~ 187 (481)
T KOG0300|consen 126 RIVSSFKDGTVKF------RLVR-----ELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGAC-------LATYT 187 (481)
T ss_pred hheeeecCCceeE------eehh-----hhcccccceeeehhhcCCcceeecccccceeEEeeccccc-------eeeec
Confidence 3466777777553 2232 3459999999999988777999999999999999987533 34456
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE------cCC----------------------------------CeEEE
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWD------VSR----------------------------------SQVLT 654 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd------~~~----------------------------------~~~~~ 654 (879)
+|.+.|+||.|++. +.++++++.|++..||. +.. ..++.
T Consensus 188 GH~GSVNsikfh~s-~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~ 266 (481)
T KOG0300|consen 188 GHTGSVNSIKFHNS-GLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLM 266 (481)
T ss_pred ccccceeeEEeccc-cceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeee
Confidence 79999999999985 99999999999999997 111 01255
Q ss_pred EeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcC
Q 002801 655 EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLR 733 (879)
Q Consensus 655 ~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~ 733 (879)
.+.+|...|.+.+|-. .+..++++|.|.+..+||++++.++..+.. ....+-++-+|. .+++++.+.|.+.++||.|
T Consensus 267 ~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHpt-QrLVvTsSrDtTFRLWDFR 344 (481)
T KOG0300|consen 267 RLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPT-QRLVVTSSRDTTFRLWDFR 344 (481)
T ss_pred eeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchhccccccCCc-ceEEEEeccCceeEeccch
Confidence 6778999999999987 899999999999999999999999998875 456888888999 8999999999999999999
Q ss_pred CCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeC
Q 002801 734 NSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSE 813 (879)
Q Consensus 734 ~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~ 813 (879)
..-..+..|+||...|+++.|..+..+++||.|.+|++||++++. .++.++.. ..+++.++.+..+..||.--.
T Consensus 345 eaI~sV~VFQGHtdtVTS~vF~~dd~vVSgSDDrTvKvWdLrNMR-----splATIRt-dS~~NRvavs~g~~iIAiPhD 418 (481)
T KOG0300|consen 345 EAIQSVAVFQGHTDTVTSVVFNTDDRVVSGSDDRTVKVWDLRNMR-----SPLATIRT-DSPANRVAVSKGHPIIAIPHD 418 (481)
T ss_pred hhcceeeeecccccceeEEEEecCCceeecCCCceEEEeeecccc-----Ccceeeec-CCccceeEeecCCceEEeccC
Confidence 776779999999999999999988889999999999999999984 57777763 567999999988888998888
Q ss_pred CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCC-cEEEEEeCCCcEEEEEeC
Q 002801 814 TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSS-NTLVAANSSGNIKILEMV 879 (879)
Q Consensus 814 Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~-~~l~s~~~Dg~I~vw~lv 879 (879)
+..|++||+.... +..+. .....+|...|+|++|..+-+ .-|.+||.|..+-=|.+.
T Consensus 419 NRqvRlfDlnG~R-laRlP--------rtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in 476 (481)
T KOG0300|consen 419 NRQVRLFDLNGNR-LARLP--------RTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKIN 476 (481)
T ss_pred CceEEEEecCCCc-cccCC--------cccccccceeeeeeeccccCcccccccccccceeeeeEec
Confidence 8999999998532 32221 111268899999999985532 038999999999999874
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=278.05 Aligned_cols=190 Identities=16% Similarity=0.177 Sum_probs=132.8
Q ss_pred cccCceEEEEeeCCcchhhhhcCCCCC-------------------CChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 52 AAIDPFVHAIEWGDVSLRQWLDKPKRS-------------------VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 52 ~~~~~~lv~e~~~g~sL~~~l~~~~~~-------------------l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
.....|++|||+.+++|.+++...... .....+..|+.||+.||.|||++|||||||||+|
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N 285 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN 285 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence 345689999999999999998543211 1233467899999999999999999999999999
Q ss_pred eeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 113 FVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 113 Ill~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||++. ++.+||+|||+++........
T Consensus 286 ILl~~~~~~~KL~DFGlA~~l~~~~~~----------------------------------------------------- 312 (566)
T PLN03225 286 IIFSEGSGSFKIIDLGAAADLRVGINY----------------------------------------------------- 312 (566)
T ss_pred EEEeCCCCcEEEEeCCCcccccccccc-----------------------------------------------------
Confidence 99985 579999999999753211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----------------------C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------V 249 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----------------------~ 249 (879)
.....+||+.|||||.+.... +
T Consensus 313 ------------------------------------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~ 356 (566)
T PLN03225 313 ------------------------------------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNL 356 (566)
T ss_pred ------------------------------------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccC
Confidence 012347889999999764322 3
Q ss_pred CccCcchhHHHHHHHhhcCCCC-ChhhHhHHhhhccc-------------CCCchhh-------ccChhhHHHHHHhcCC
Q 002801 250 SCASDIYRLGVLLFELFCPFST-GEEKTRTMSSLRHR-------------VLPPQLL-------LKFPKEASFCLWLLHP 308 (879)
Q Consensus 250 ~~~sDIwSlGvil~ell~pf~~-~~~~~~~~~~~~~~-------------~~~~~~~-------~~~~~~~~li~~~L~~ 308 (879)
+.++|||||||+||||++|... ..........+... ...+... .......+||.+||.+
T Consensus 357 ~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~ 436 (566)
T PLN03225 357 PDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRF 436 (566)
T ss_pred CCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccC
Confidence 4567999999999999994332 22221111111110 0000000 0112345899999999
Q ss_pred CCCCCCCHHHHhhcccccCCcC
Q 002801 309 EPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 309 dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
||++|||+.++|+||||+....
T Consensus 437 dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 437 KGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred CcccCCCHHHHhCCcCcCCCCc
Confidence 9999999999999999986543
|
|
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=260.88 Aligned_cols=205 Identities=18% Similarity=0.116 Sum_probs=154.4
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+....|++++..++ ++.+......|++|||++|++|.+++.+....+++.++..++.||+.||+|||++||+|||||
T Consensus 58 ~~l~~l~h~~i~~~~~-~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlk 136 (284)
T cd05079 58 EILRNLYHENIVKYKG-ICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLA 136 (284)
T ss_pred HHHHhCCCCCeeeeee-EEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 3455667888877665 665554567899999999999999996654568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||+++..........
T Consensus 137 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------------------------- 167 (284)
T cd05079 137 ARNVLVESEHQVKIGDFGLTKAIETDKEYYT------------------------------------------------- 167 (284)
T ss_pred hheEEEcCCCCEEECCCccccccccCcccee-------------------------------------------------
Confidence 9999999999999999999876421100000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 168 --------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~ 209 (284)
T cd05079 168 --------------------------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYC 209 (284)
T ss_pred --------------------------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCC
Confidence 0011345677999999988889999999999999999998
Q ss_pred -CCCCCh--------------hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGE--------------EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|+.... ........+......+.....++.+.+|+.+||+.+|.+||++.+++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 279 (284)
T cd05079 210 DSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG 279 (284)
T ss_pred CCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 221110 0011111122222233344567889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.5e-26 Score=249.03 Aligned_cols=266 Identities=20% Similarity=0.272 Sum_probs=222.6
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
++-.....+.+|+..+.++...... +.+.|+++.|+++|.+||+|..+|.|.|||....... +.....|
T Consensus 191 laValg~~vylW~~~s~~v~~l~~~-----~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~------~~~~~~h 259 (484)
T KOG0305|consen 191 LAVALGQSVYLWSASSGSVTELCSF-----GEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKT------RTLRGSH 259 (484)
T ss_pred EEEEecceEEEEecCCCceEEeEec-----CCCceEEEEECCCCCEEEEeecCCeEEEEehhhcccc------ccccCCc
Confidence 4444555788899888775544332 2789999999999999999999999999998763221 1122237
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEE-eccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCce
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE-MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVS 695 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~-~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~ 695 (879)
...|.|++|+ ...+.+|+.||.|.++|+...+.... +.+|...|+.+.|++ ++.++|+|+.|+.+.|||..+..+
T Consensus 260 ~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~-d~~~lASGgnDN~~~Iwd~~~~~p 335 (484)
T KOG0305|consen 260 ASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSP-DGNQLASGGNDNVVFIWDGLSPEP 335 (484)
T ss_pred CceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECC-CCCeeccCCCccceEeccCCCccc
Confidence 8899999998 67899999999999999988776555 889999999999999 999999999999999999977777
Q ss_pred EEEEe-cCCceEEEEeeCCCCCEEEEEe--CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEE--EcCCcE
Q 002801 696 IGTIK-TKANVCCVQFPLDSGRSLAFGS--ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSA--STDNTL 769 (879)
Q Consensus 696 i~~~~-~~~~v~~v~~~p~~~~~l~tgs--~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~--s~D~~i 769 (879)
+.++. |.+.|-.++|+|....+||+|+ .|++|++||..++.. +... .-...|+.|.|+ ..+.|+++ -.++.|
T Consensus 336 ~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~-i~~v-dtgsQVcsL~Wsk~~kEi~sthG~s~n~i 413 (484)
T KOG0305|consen 336 KFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGAR-IDSV-DTGSQVCSLIWSKKYKELLSTHGYSENQI 413 (484)
T ss_pred cEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcE-eccc-ccCCceeeEEEcCCCCEEEEecCCCCCcE
Confidence 76665 6788999999999899999964 699999999998874 3333 345789999999 66666654 356889
Q ss_pred EEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCC
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFP 825 (879)
Q Consensus 770 ~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~ 825 (879)
.||++.+. ..+..+.+|...|..+++||||.+|++|+.|.++++|++-..
T Consensus 414 ~lw~~ps~------~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 414 TLWKYPSM------KLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEecccc------ceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 99999986 788999999999999999999999999999999999998764
|
|
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-28 Score=264.25 Aligned_cols=200 Identities=15% Similarity=0.084 Sum_probs=147.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC------------------CCCChhHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK------------------RSVDVYECLHIFRQIV 92 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~------------------~~l~~~~~~~i~~qi~ 92 (879)
.+....|++++..++ .+.++ ...|++|||+.+++|.+++.... ..+++.+++.|+.||+
T Consensus 72 ~l~~l~h~niv~~~~-~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~ 148 (304)
T cd05096 72 ILSRLKDPNIIRLLG-VCVDE--DPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIA 148 (304)
T ss_pred HHhhcCCCCeeEEEE-EEecC--CceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHH
Confidence 344557888877666 55443 35799999999999999984321 2367788999999999
Q ss_pred HHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccc
Q 002801 93 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (879)
Q Consensus 93 ~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (879)
.||.|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 149 ~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~---------------------------------- 194 (304)
T cd05096 149 SGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYY---------------------------------- 194 (304)
T ss_pred HHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCcee----------------------------------
Confidence 9999999999999999999999999999999999998653111000
Q ss_pred cccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCcc
Q 002801 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252 (879)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~ 252 (879)
.......++..|+|||++.+..++.+
T Consensus 195 ------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 220 (304)
T cd05096 195 ------------------------------------------------------RIQGRAVLPIRWMAWECILMGKFTTA 220 (304)
T ss_pred ------------------------------------------------------EecCcCCCCccccCHHHHhcCCCCch
Confidence 00011245778999999988889999
Q ss_pred CcchhHHHHHHHhhc-----CCCCChhhHhHH---hhhcc---cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 253 SDIYRLGVLLFELFC-----PFSTGEEKTRTM---SSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 253 sDIwSlGvil~ell~-----pf~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||||||++|||++ ||.......... ...+. ...+.....+++.+.+|+.+||..||.+|||+.+|.+
T Consensus 221 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 221 SDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred hhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 999999999999985 564432221111 11111 1112222345677899999999999999999999943
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=268.60 Aligned_cols=213 Identities=16% Similarity=0.189 Sum_probs=156.1
Q ss_pred eecccccccCCCCCCccccc--ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+...+|++++..++ ++.. ......|++|||+. ++|.+++... ..+++.+++.++.||+.||.|||++||+||||
T Consensus 57 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dl 133 (334)
T cd07855 57 ILRHFKHDNIIAIRD-ILRPPGADFKDVYVVMDLME-SDLHHIIHSD-QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDL 133 (334)
T ss_pred HHHhcCCCCccCHHH-hccccCCCCceEEEEEehhh-hhHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 444556888777555 3332 23346799999995 5899999654 45899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+||+|||+++.........
T Consensus 134 kp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------------- 164 (334)
T cd07855 134 KPSNLLVNEDCELRIGDFGMARGLSSSPTEH------------------------------------------------- 164 (334)
T ss_pred CHHHEEEcCCCcEEecccccceeecccCcCC-------------------------------------------------
Confidence 9999999999999999999986532110000
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~ 267 (879)
.......+|+.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 165 -------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~ 207 (334)
T cd07855 165 -------------------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG 207 (334)
T ss_pred -------------------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHc
Confidence 000122478999999999866 458999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcc-------------------------cCC-C----chhhccChhhHHHHHHhcCCCCCCCC
Q 002801 268 ---PFSTGEEKTRTMSSLRH-------------------------RVL-P----PQLLLKFPKEASFCLWLLHPEPSGRP 314 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~-------------------------~~~-~----~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (879)
||...... ..+..+.. ... + ......++.+.++|.+||+.+|.+||
T Consensus 208 g~~pf~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 286 (334)
T cd07855 208 RRQLFPGKNYV-HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERI 286 (334)
T ss_pred CCCccCCCChH-HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCc
Confidence 66443221 11110000 000 0 01133567789999999999999999
Q ss_pred CHHHHhhcccccCCcCchH
Q 002801 315 KMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 315 t~~evl~hp~~~~~~~~~~ 333 (879)
++.++++||||.....+..
T Consensus 287 t~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 287 TVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred CHHHHHhChhhhhccCCcc
Confidence 9999999999987655544
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=254.65 Aligned_cols=203 Identities=17% Similarity=0.112 Sum_probs=152.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .|... +...|++|||+.+++|.+++.+....+++..++.++.||+.||+|||+.||+||||||
T Consensus 49 ~l~~l~h~~iv~~~~-~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~ 126 (262)
T cd05058 49 IMKDFSHPNVLSLLG-ICLPS-EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAA 126 (262)
T ss_pred HHccCCCCCcceEEE-EeecC-CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCc
Confidence 345567888887665 55432 3457999999999999999966555678888999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++..........
T Consensus 127 ~nili~~~~~~kl~dfg~~~~~~~~~~~~~-------------------------------------------------- 156 (262)
T cd05058 127 RNCMLDESFTVKVADFGLARDIYDKEYYSV-------------------------------------------------- 156 (262)
T ss_pred ceEEEcCCCcEEECCccccccccCCcceee--------------------------------------------------
Confidence 999999999999999999865321100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~ 200 (262)
T cd05058 157 ------------------------------------HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 200 (262)
T ss_pred ------------------------------------cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCC
Confidence 00011245678999999988889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|++...........+.....++.....++.+.+++.+||..+|++||++.++++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 201 PPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred CCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 333333333333333333333333345577889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-25 Score=252.14 Aligned_cols=232 Identities=16% Similarity=0.206 Sum_probs=185.0
Q ss_pred ccCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCcccccce-EEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 564 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 564 l~~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
+.+|.+.|++++|+| ++.+||+|+.|++|+|||+........ ...++ ....|...|.+++|+|..+++|++++.|++
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~-~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQN-ISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccc-cCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 668999999999999 889999999999999999975321111 11122 234588999999999976689999999999
Q ss_pred EEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCc--eEEEEeeCCCCCEEE
Q 002801 642 VQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN--VCCVQFPLDSGRSLA 719 (879)
Q Consensus 642 V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~--v~~v~~~p~~~~~l~ 719 (879)
|+|||+.+++.+..+..|...|.+++|+| ++.+|++|+.|++|+|||+++++.+.++..+.. +..+.|.++ +..++
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~sp-dG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~-~~~iv 227 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNL-DGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKR-KDLII 227 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEEC-CCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCC-CCeEE
Confidence 99999999999999999999999999999 999999999999999999999999888875543 557789988 45555
Q ss_pred EEe----CCCeEEEEEcCCCceeeEEEccCC-CCEEEEEEc-CCCEEEEEE-cCCcEEEEecCCCcccccCCceEEEeC-
Q 002801 720 FGS----ADHRIYYYDLRNSKIPLCTLIGHN-KTVSYVKFV-DATTLVSAS-TDNTLKLWDLSMCTSRVIDTPLHSFTG- 791 (879)
Q Consensus 720 tgs----~d~~I~iwDl~~~~~~~~~~~~h~-~~V~~v~fs-~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~~~~~~~- 791 (879)
+++ .|+.|++||+++...++.....+. ..+....|+ ++++|++++ .|+.|++||+.++ .++.....
T Consensus 228 t~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~------~~~~~~~~~ 301 (493)
T PTZ00421 228 TLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNE------RLTFCSSYS 301 (493)
T ss_pred EEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCC------ceEEEeecc
Confidence 543 478999999998876666655443 455566677 888888887 5999999999986 34443332
Q ss_pred CCCcEEEEEEecC
Q 002801 792 HTNVKNFVGLSVW 804 (879)
Q Consensus 792 h~~~v~~v~~sp~ 804 (879)
+..++..++|.|.
T Consensus 302 s~~~~~g~~~~pk 314 (493)
T PTZ00421 302 SVEPHKGLCMMPK 314 (493)
T ss_pred CCCCCcceEeccc
Confidence 3456777888874
|
|
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-28 Score=268.71 Aligned_cols=202 Identities=20% Similarity=0.260 Sum_probs=149.7
Q ss_pred eeecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
..+...+|++++..++ ++... ....+|+||||+. ++|.+++... +++..+..++.||+.||+|||++||+|
T Consensus 67 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H 141 (353)
T cd07850 67 VLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIH 141 (353)
T ss_pred HHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 3445567888877665 33222 2235799999995 5888888543 899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++.++.+|++|||+++......
T Consensus 142 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------- 172 (353)
T cd07850 142 RDLKPSNIVVKSDCTLKILDFGLARTAGTSF------------------------------------------------- 172 (353)
T ss_pred CCCCHHHEEECCCCCEEEccCccceeCCCCC-------------------------------------------------
Confidence 9999999999999999999999986532110
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 173 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l 210 (353)
T cd07850 173 ------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 210 (353)
T ss_pred ------------------------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHH
Confidence 00123678899999999998999999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhcc----------------------cC---------------CCch----hhccChhhHHH
Q 002801 266 FC---PFSTGEEKTRTMSSLRH----------------------RV---------------LPPQ----LLLKFPKEASF 301 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~~----------------------~~---------------~~~~----~~~~~~~~~~l 301 (879)
++ ||............+.. .. .+.. .....+.+.+|
T Consensus 211 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (353)
T cd07850 211 IRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDL 290 (353)
T ss_pred HHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHH
Confidence 98 66543321111110000 00 0000 01123457899
Q ss_pred HHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 302 CLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 302 i~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|.+||+.||++|||+.|+|+||||+.
T Consensus 291 i~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 291 LSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred HHHHcCCChhhCcCHHHHhcChhHhh
Confidence 99999999999999999999999874
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=228.91 Aligned_cols=248 Identities=18% Similarity=0.286 Sum_probs=211.2
Q ss_pred cceEEeccCCCeeEEEEeC--CCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEE
Q 002801 609 YPVVEMASRSKLSSICWNS--YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686 (879)
Q Consensus 609 ~~~~~~~~~~~i~~l~~~~--~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~ 686 (879)
.|...-+|..+|-.++|+| .++-+|++++.||.-.+=+-+||..+.+|.+|.+.||+..++. +....|+++.|-+.+
T Consensus 6 ~pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~-na~~aasaaadftak 84 (334)
T KOG0278|consen 6 TPLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNK-NATRAASAAADFTAK 84 (334)
T ss_pred CceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCc-hhhhhhhhcccchhh
Confidence 3566677899999999987 3467899999999999988899999999999999999999998 888999999999999
Q ss_pred EEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEc
Q 002801 687 LWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSAST 765 (879)
Q Consensus 687 iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~ 765 (879)
+||.-+|..+.+|.++--|..++|+.+ .++|++|+.+..+++||+...+.|...+.+|.+.|..+.|. ..+.|+|++.
T Consensus 85 vw~a~tgdelhsf~hkhivk~~af~~d-s~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSad 163 (334)
T KOG0278|consen 85 VWDAVTGDELHSFEHKHIVKAVAFSQD-SNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSAD 163 (334)
T ss_pred hhhhhhhhhhhhhhhhheeeeEEeccc-chhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeecc
Confidence 999999999999999999999999999 89999999999999999999998899999999999999998 7888888899
Q ss_pred CCcEEEEecCCCcccccCCceEEEeCCCC----------------------------------------cEEEEEEecCC
Q 002801 766 DNTLKLWDLSMCTSRVIDTPLHSFTGHTN----------------------------------------VKNFVGLSVWD 805 (879)
Q Consensus 766 D~~i~lwd~~~~~~~~~~~~~~~~~~h~~----------------------------------------~v~~v~~sp~~ 805 (879)
|++||+||.+++. .++++.- .. .|.+..++|+.
T Consensus 164 d~tVRLWD~rTgt------~v~sL~~-~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k 236 (334)
T KOG0278|consen 164 DKTVRLWDHRTGT------EVQSLEF-NSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKK 236 (334)
T ss_pred CCceEEEEeccCc------EEEEEec-CCCCcceeeccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCC
Confidence 9999999999984 2333221 11 23444556666
Q ss_pred CEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 806 GYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 806 ~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
.+++||++|..++.||..++..+..+. .+|-++|-||.|+|+|. ..++|+.||+|++|++
T Consensus 237 ~~fVaGged~~~~kfDy~TgeEi~~~n------------kgh~gpVhcVrFSPdGE-~yAsGSEDGTirlWQt 296 (334)
T KOG0278|consen 237 EFFVAGGEDFKVYKFDYNTGEEIGSYN------------KGHFGPVHCVRFSPDGE-LYASGSEDGTIRLWQT 296 (334)
T ss_pred ceEEecCcceEEEEEeccCCceeeecc------------cCCCCceEEEEECCCCc-eeeccCCCceEEEEEe
Confidence 666666666666666666665554421 57889999999999999 9999999999999986
|
|
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=255.64 Aligned_cols=203 Identities=19% Similarity=0.226 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ....|++|||+.|++|.+++++. ..+++..++.++.||+.||.|||++|++|+||||
T Consensus 61 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~ 136 (272)
T cd06629 61 TLKDLDHLNIVQYLG-FETT--EEYLSIFLEYVPGGSIGSCLRTY-GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKA 136 (272)
T ss_pred HHHhcCCCCcceEEE-Eecc--CCceEEEEecCCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCCh
Confidence 345567888877666 4443 45789999999999999999665 5789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||+++........
T Consensus 137 ~nil~~~~~~~~l~d~~~~~~~~~~~~~---------------------------------------------------- 164 (272)
T cd06629 137 DNLLVDADGICKISDFGISKKSDDIYDN---------------------------------------------------- 164 (272)
T ss_pred hhEEEcCCCeEEEeeccccccccccccc----------------------------------------------------
Confidence 9999999999999999998653111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC--CCccCcchhHHHHHHHhhc-
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvil~ell~- 267 (879)
.......|+..|+|||.+.... ++.++|+|||||++|||++
T Consensus 165 ------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g 208 (272)
T cd06629 165 ------------------------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAG 208 (272)
T ss_pred ------------------------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhC
Confidence 0001235788999999987654 8999999999999999999
Q ss_pred --CCCCChhhHhHHhhhccc---CCCc-hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHR---VLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||................ ..++ .....+..+.+++.+||.++|.+||++.++++||||
T Consensus 209 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 209 RRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 665443332222211111 1111 123446788999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.9e-28 Score=261.70 Aligned_cols=201 Identities=16% Similarity=0.129 Sum_probs=154.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ +|.+ ....|++|||+. ++|.+++......+++.++..++.||+.||.|||++||+|+||+|
T Consensus 68 ~l~~l~h~niv~~~~-~~~~--~~~~~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p 143 (307)
T cd06607 68 FLQQLRHPNTIEYKG-CYLR--EHTAWLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKA 143 (307)
T ss_pred HHHhCCCCCEEEEEE-EEEe--CCeEEEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCc
Confidence 455667888877666 5544 345799999996 577777754445789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++......
T Consensus 144 ~nIl~~~~~~~kL~dfg~~~~~~~~------------------------------------------------------- 168 (307)
T cd06607 144 GNILLTEPGTVKLADFGSASLVSPA------------------------------------------------------- 168 (307)
T ss_pred ccEEECCCCCEEEeecCcceecCCC-------------------------------------------------------
Confidence 9999999999999999988542110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
....|+..|+|||++. ...++.++|||||||++|||++
T Consensus 169 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~t 209 (307)
T cd06607 169 ---------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209 (307)
T ss_pred ---------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHc
Confidence 1135678899999885 3458899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCc-hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
||........... +.....+. .....+..+.+++.+||..+|.+||++.+++.||||.....
T Consensus 210 g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 275 (307)
T cd06607 210 RKPPLFNMNAMSALYH-IAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRERP 275 (307)
T ss_pred CCCCCCCccHHHHHHH-HhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccCC
Confidence 6655443333222 22221211 12234567889999999999999999999999999986543
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=253.83 Aligned_cols=200 Identities=20% Similarity=0.235 Sum_probs=156.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ ... .....|++|||++|++|.+++.+. ...+++..++.++.|++.||+|||++||+|+|||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~ 128 (256)
T cd08220 52 VLKLLSHPNIIEYYE-NFL--EDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLK 128 (256)
T ss_pred HHhhCCCCchhheee-eEe--cCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 444557888877666 222 234689999999999999999553 3458999999999999999999999999999999
Q ss_pred CcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 110 PSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 110 P~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
|+||+++.++ .+|++|||.+........
T Consensus 129 ~~nil~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 157 (256)
T cd08220 129 TQNILLDKHKMVVKIGDFGISKILSSKSK--------------------------------------------------- 157 (256)
T ss_pred HHHEEEcCCCCEEEEccCCCceecCCCcc---------------------------------------------------
Confidence 9999998654 579999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 158 ----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~ 197 (256)
T cd08220 158 ----------------------------------------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASL 197 (256)
T ss_pred ----------------------------------------ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhC
Confidence 011367888999999998889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||.............. ...++.....++.+.+++.+||..+|.+|||+.|+++||||
T Consensus 198 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 198 KRAFEAANLPALVLKIMS-GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred CCCcccCchHHHHHHHHh-cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 7755544433333333 22333334567889999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.8e-28 Score=259.45 Aligned_cols=203 Identities=17% Similarity=0.164 Sum_probs=156.9
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+...+|++++..++ .+.+ ....|+||||+++++|.+++.. ..+++..++.++.||++||.|||++||+|+||
T Consensus 53 ~~~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl 127 (277)
T cd06642 53 ITVLSQCDSPYITRYYG-SYLK--GTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDI 127 (277)
T ss_pred HHHHHcCCCCccHhhhc-cccc--CCceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCC
Confidence 33445567888877666 4433 4468999999999999999854 46899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||++........
T Consensus 128 ~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 156 (277)
T cd06642 128 KAANVLLSEQGDVKLADFGVAGQLTDTQI--------------------------------------------------- 156 (277)
T ss_pred ChheEEEeCCCCEEEccccccccccCcch---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg 197 (277)
T cd06642 157 ---------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKG 197 (277)
T ss_pred ---------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhC
Confidence 0012367889999999998889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||....... ....+.....+......+..+.+++.+||..+|.+||++.++++||||..
T Consensus 198 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 198 EPPNSDLHPMR-VLFLIPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred CCCCcccchhh-HHhhhhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 554322221 11222222222222334567889999999999999999999999999864
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=253.55 Aligned_cols=198 Identities=16% Similarity=0.170 Sum_probs=152.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||++|++|.+++......+++..++.++.||+.||+|||++||+||||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p 128 (256)
T cd05114 52 VMMKLSHPKLVQLYG-VCTQ--QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAA 128 (256)
T ss_pred HHHHCCCCCceeEEE-EEcc--CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCc
Confidence 344567888887776 5543 3468999999999999999965545789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||.++........
T Consensus 129 ~ni~i~~~~~~kl~d~g~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd05114 129 RNCLVSSTGVVKVSDFGMTRYVLDDEYT---------------------------------------------------- 156 (256)
T ss_pred ceEEEcCCCeEEECCCCCccccCCCcee----------------------------------------------------
Confidence 9999999999999999998653111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||+||||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~ 199 (256)
T cd05114 157 -------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGK 199 (256)
T ss_pred -------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCC
Confidence 0011134567999999988889999999999999999997
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||........ ...+.....+......+..+.+++.+||..+|.+||++.++++
T Consensus 200 ~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 200 MPFEKKSNYEV-VEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCCCCCHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 6654433332 3333333233333345567899999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-28 Score=255.40 Aligned_cols=198 Identities=13% Similarity=0.073 Sum_probs=154.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ...+++|||+.+++|.+++... ..+++..+..++.||+.||+|||++||+||||||
T Consensus 49 ~l~~l~h~~i~~~~~-~~~~---~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp 123 (257)
T cd05116 49 VMQQLDNPYIVRMIG-ICEA---ESWMLVMELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAA 123 (257)
T ss_pred HHHhCCCCCcceEEE-EEcC---CCcEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccch
Confidence 445567888877765 5543 3579999999999999999654 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 124 ~nill~~~~~~kl~Dfg~~~~~~~~~~~---------------------------------------------------- 151 (257)
T cd05116 124 RNVLLVTQHYAKISDFGLSKALGADENY---------------------------------------------------- 151 (257)
T ss_pred hhEEEcCCCeEEECCCccccccCCCCCe----------------------------------------------------
Confidence 9999999999999999998764221000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
........++..|+|||.+....++.++|||||||++|||++
T Consensus 152 -----------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~ 196 (257)
T cd05116 152 -----------------------------------YKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQ 196 (257)
T ss_pred -----------------------------------eeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCC
Confidence 000011234678999999988889999999999999999986
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++.+...++.+.++|.+||..||++||++.+|.+
T Consensus 197 ~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 197 KPYKGMKG-NEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCCCCCCH-HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 6654333 3344444444444455567789999999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=255.18 Aligned_cols=198 Identities=15% Similarity=0.185 Sum_probs=153.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ +|.+ ....|++|||+.+++|.+++......+++..++.++.||+.||.|||+.||+|+||||+
T Consensus 53 l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ 129 (256)
T cd05113 53 MMKLSHEKLVQLYG-VCTK--QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAAR 129 (256)
T ss_pred HhcCCCCCeeeEEE-EEcc--CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcc
Confidence 44557888887766 5543 34579999999999999999665457899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||.++....+...
T Consensus 130 nili~~~~~~kl~d~g~~~~~~~~~~~----------------------------------------------------- 156 (256)
T cd05113 130 NCLVDDQGCVKVSDFGLSRYVLDDEYT----------------------------------------------------- 156 (256)
T ss_pred eEEEcCCCCEEECCCccceecCCCcee-----------------------------------------------------
Confidence 999999999999999998653111000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---- 267 (879)
......++..|+|||.+.+..++.++|||||||+||||++
T Consensus 157 ------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~ 200 (256)
T cd05113 157 ------------------------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKM 200 (256)
T ss_pred ------------------------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCC
Confidence 0011234677999999988889999999999999999996
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||....... ....+.....++.....++.+.+++.+||+.+|.+||++.+++.+
T Consensus 201 p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 201 PYERFNNSE-TVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred CcCcCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 664433322 223333333333333456788999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=232.39 Aligned_cols=282 Identities=17% Similarity=0.291 Sum_probs=239.2
Q ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEc
Q 002801 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (879)
Q Consensus 568 ~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~ 647 (879)
...++++...|....++|||.|+.+.+||...... .....+|..+|+.+.+++. ...+++++.|..|+||..
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~-------l~~~~Gh~kki~~v~~~~~-~~~v~~aSad~~i~vws~ 290 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQI-------LATLKGHTKKITSVKFHKD-LDTVITASADEIIRVWSV 290 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhh-------hhhccCcceEEEEEEeccc-hhheeecCCcceEEeecc
Confidence 35688888888778999999999999999876321 1223468889999999995 889999999999999999
Q ss_pred CCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecC---CceEEEEeeCCCCCEEEEEeCC
Q 002801 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK---ANVCCVQFPLDSGRSLAFGSAD 724 (879)
Q Consensus 648 ~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~---~~v~~v~~~p~~~~~l~tgs~d 724 (879)
...........|+.+|+.+..+| ++.+|+++|+|++.-..|++++..+....+. -.+++.+|||| |.+|.+|..|
T Consensus 291 ~~~s~~~~~~~h~~~V~~ls~h~-tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpD-gLifgtgt~d 368 (506)
T KOG0289|consen 291 PLSSEPTSSRPHEEPVTGLSLHP-TGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPD-GLIFGTGTPD 368 (506)
T ss_pred ccccCccccccccccceeeeecc-CCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCC-ceEEeccCCC
Confidence 88888888889999999999999 9999999999999999999999998877764 34899999999 9999999999
Q ss_pred CeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCC-CcEEEEEEe
Q 002801 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHT-NVKNFVGLS 802 (879)
Q Consensus 725 ~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~-~~v~~v~~s 802 (879)
+.|+|||+.+.. .+..|.+|.++|..|.|+ +|.+|++++.|+.|++||++.. +...++.-.. .+++.+.|.
T Consensus 369 ~~vkiwdlks~~-~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl------~n~kt~~l~~~~~v~s~~fD 441 (506)
T KOG0289|consen 369 GVVKIWDLKSQT-NVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKL------KNFKTIQLDEKKEVNSLSFD 441 (506)
T ss_pred ceEEEEEcCCcc-ccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhh------cccceeeccccccceeEEEc
Confidence 999999999988 489999999999999999 9999999999999999999986 4445554332 369999999
Q ss_pred cCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
+.|.||+.+|.|=.|++++..+.. +. .-..+.+|.+..+.|.|..... ++++++.|..++++.+
T Consensus 442 ~SGt~L~~~g~~l~Vy~~~k~~k~----W~-------~~~~~~~~sg~st~v~Fg~~aq-~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 442 QSGTYLGIAGSDLQVYICKKKTKS----WT-------EIKELADHSGLSTGVRFGEHAQ-YLASTSMDAILRLYAL 505 (506)
T ss_pred CCCCeEEeecceeEEEEEeccccc----ce-------eeehhhhcccccceeeecccce-EEeeccchhheEEeec
Confidence 999999999888777777654321 11 1122367788899999999888 9999999999998864
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=260.15 Aligned_cols=219 Identities=16% Similarity=0.128 Sum_probs=158.7
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+. ....+|++|||++|++|.++++.. +.+++..+..++.|++.||.|||+.||+||||||+
T Consensus 55 l~~~~~~~i~~~~~-~~~--~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ 130 (305)
T cd05609 55 LTFAENPFVVSMFC-SFE--TKRHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPD 130 (305)
T ss_pred HHhCCCCCeeeeEE-EEe--cCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchH
Confidence 34567788877665 333 334679999999999999999654 56899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++..+.+|++|||+++........ .+... .
T Consensus 131 NIll~~~~~~~l~dfg~~~~~~~~~~~-~~~~~---------------------------------------~------- 163 (305)
T cd05609 131 NLLITSMGHIKLTDFGLSKIGLMSLTT-NLYEG---------------------------------------H------- 163 (305)
T ss_pred HEEECCCCCEEEeeCCCccccCcCccc-ccccc---------------------------------------c-------
Confidence 999999999999999998642111000 00000 0
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
. .............|+..|+|||.+.+..++.++|||||||+||||++ |
T Consensus 164 ~----------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~p 215 (305)
T cd05609 164 I----------------------------EKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVP 215 (305)
T ss_pred c----------------------------ccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 0 00000000112467889999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhccc-CCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCc
Q 002801 269 FSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 329 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~ 329 (879)
|................ ..+......++.+.+++.+||+.+|.+||+ +.++++||||....
T Consensus 216 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~ 280 (305)
T cd05609 216 FFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280 (305)
T ss_pred CCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCC
Confidence 76543332222222221 122222245677899999999999999998 79999999997643
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-28 Score=237.22 Aligned_cols=208 Identities=18% Similarity=0.187 Sum_probs=150.4
Q ss_pred cccccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcC--cc
Q 002801 33 THGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG--IV 104 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~g--iv 104 (879)
..-+|++++..+. .+..+ .....||+..|+..|||.+.+. ..+..+++.+++.||.+|++||.+||+.. .+
T Consensus 73 rkf~s~~vl~l~d-h~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yA 151 (302)
T KOG2345|consen 73 RKFNSPNVLRLVD-HQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYA 151 (302)
T ss_pred HhhCCcchHHHHH-HHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 3467788877666 33222 2345899999999999999883 33447999999999999999999999998 99
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||.|||++.++.++++|||.+....-.-.. ..+...
T Consensus 152 H~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~-----------------------~~~a~~----------------- 191 (302)
T KOG2345|consen 152 HRDIKPANILLSDSGLPVLMDLGSATQAPIQIEG-----------------------SRQALR----------------- 191 (302)
T ss_pred ccCCCcceeEecCCCceEEEeccCccccceEeec-----------------------hHHHHH-----------------
Confidence 9999999999999999999999999763111000 000000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC---CCCCccCcchhHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVL 261 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDIwSlGvi 261 (879)
+.++ ....-|..|+|||.+.- ...+.++|||||||+
T Consensus 192 --------------lQe~---------------------------a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCt 230 (302)
T KOG2345|consen 192 --------------LQEW---------------------------AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCT 230 (302)
T ss_pred --------------HHHH---------------------------HHHhCCCcccCchheecccCcccccccchhhhhHH
Confidence 0000 11234788999999863 347899999999999
Q ss_pred HHHhhc---CCCCChhh--HhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~---pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||+|+. ||...... ..+.+........|.....+..+..||.+||+.||.+||++.+++.+
T Consensus 231 LYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 231 LYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred HHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 999998 88543221 11222222233334444477888999999999999999999999864
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=259.37 Aligned_cols=201 Identities=16% Similarity=0.168 Sum_probs=155.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|++|||+. ++|.+++.....++++.+++.++.||+.||.|||++||+|+||||
T Consensus 74 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p 149 (313)
T cd06633 74 FLQQLKHPNTIEYKG-CYLK--EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKA 149 (313)
T ss_pred HHHhCCCCCCccEEE-EEEe--CCEEEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCh
Confidence 445567888877666 4443 345799999995 578888765556799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++.....
T Consensus 150 ~nili~~~~~~kL~dfg~~~~~~~-------------------------------------------------------- 173 (313)
T cd06633 150 GNILLTEPGQVKLADFGSASKSSP-------------------------------------------------------- 173 (313)
T ss_pred hhEEECCCCCEEEeecCCCcccCC--------------------------------------------------------
Confidence 999999999999999998743200
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
.....|+..|+|||++. ...++.++|||||||++|||++
T Consensus 174 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~ 215 (313)
T cd06633 174 --------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 215 (313)
T ss_pred --------------------------------------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHh
Confidence 01136788899999984 3558999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||.........................+..+.+|+.+||+++|.+||++.+++.||||....
T Consensus 216 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 216 RKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred CCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 77655443333333222221112223445688999999999999999999999999998644
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-25 Score=251.15 Aligned_cols=250 Identities=14% Similarity=0.178 Sum_probs=192.5
Q ss_pred EEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe--------EEEEe
Q 002801 585 AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ--------VLTEM 656 (879)
Q Consensus 585 t~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~--------~~~~~ 656 (879)
.||.++.|++|+..... .......|...|.+++|+|.++++|++|+.||+|+|||+.++. ++..+
T Consensus 49 gGG~~gvI~L~~~~r~~-------~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L 121 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKP-------PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCIL 121 (568)
T ss_pred CCCceeEEEeeecCCCc-------eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEe
Confidence 36778899999876420 1112346889999999999768899999999999999997542 34467
Q ss_pred ccCCCcEEEEEEecCCCC-EEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCC
Q 002801 657 REHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS 735 (879)
Q Consensus 657 ~~h~~~v~sv~~sp~~~~-~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~ 735 (879)
.+|...|++++|+| ++. +|++|+.|++|+|||+++++.+..+.++..|.+++|+|+ +.+|++++.|+.|++||++++
T Consensus 122 ~gH~~~V~sVaf~P-~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~Slswspd-G~lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 122 KGHKKKISIIDWNP-MNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIK-GNLLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred ecCCCcEEEEEECC-CCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCC-CCEEEEEecCCEEEEEECCCC
Confidence 78999999999999 555 568999999999999999988888887788999999999 889999999999999999998
Q ss_pred ceeeEEEccCCCCEEE-----EEEc-CCCEEEEEEcCC----cEEEEecCCCcccccCCceEEEeCC--CCcEEEEEEec
Q 002801 736 KIPLCTLIGHNKTVSY-----VKFV-DATTLVSASTDN----TLKLWDLSMCTSRVIDTPLHSFTGH--TNVKNFVGLSV 803 (879)
Q Consensus 736 ~~~~~~~~~h~~~V~~-----v~fs-~~~~l~s~s~D~----~i~lwd~~~~~~~~~~~~~~~~~~h--~~~v~~v~~sp 803 (879)
+. +..+.+|.+.+.. ..|+ ++.+|+|++.|+ +|+|||++.. ..++..+..+ .+.+......+
T Consensus 200 ~~-i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~-----~~pl~~~~ld~~~~~L~p~~D~~ 273 (568)
T PTZ00420 200 EI-ASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNT-----TSALVTMSIDNASAPLIPHYDES 273 (568)
T ss_pred cE-EEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCC-----CCceEEEEecCCccceEEeeeCC
Confidence 74 7788999876433 3344 778899888764 7999999975 2455555433 33333344455
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCC
Q 002801 804 WDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSS 861 (879)
Q Consensus 804 ~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 861 (879)
+|.++++|+.|+.|++|++..+. +..+. . ..+..++.+++|.|+..
T Consensus 274 tg~l~lsGkGD~tIr~~e~~~~~-~~~l~----------~-~~s~~p~~g~~f~Pkr~ 319 (568)
T PTZ00420 274 TGLIYLIGKGDGNCRYYQHSLGS-IRKVN----------E-YKSCSPFRSFGFLPKQI 319 (568)
T ss_pred CCCEEEEEECCCeEEEEEccCCc-EEeec----------c-cccCCCccceEEccccc
Confidence 68899999999999999997653 11111 0 12456788899998743
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=258.42 Aligned_cols=202 Identities=17% Similarity=0.213 Sum_probs=152.6
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
..+.+.+|++++..++ .+.+ ....|++|||+. ++|..++.. ....+++..++.++.||+.||+|||++||+|+||
T Consensus 51 ~~l~~l~h~~i~~~~~-~~~~--~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l 126 (284)
T cd07860 51 SLLKELNHPNIVKLLD-VIHT--ENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDL 126 (284)
T ss_pred HHHHhcCCCCCcchhh-hccc--CCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 3455667888888777 4433 446899999995 689998843 3356899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+|++|||+++..+....
T Consensus 127 ~p~nill~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 155 (284)
T cd07860 127 KPQNLLINTEGAIKLADFGLARAFGVPVR--------------------------------------------------- 155 (284)
T ss_pred CHHHEEECCCCCEEEeeccchhhcccCcc---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~ 267 (879)
......++.+|+|||.+.+.. ++.++|||||||++|||++
T Consensus 156 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t 196 (284)
T cd07860 156 ---------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 196 (284)
T ss_pred ---------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHH
Confidence 001135688899999987755 6889999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCC---------------------------CchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVL---------------------------PPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.................. .......++.+.++|.+||+.||.+|||++
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 276 (284)
T cd07860 197 RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAK 276 (284)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHH
Confidence 67554433222221111000 001123456778999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
+++.||||
T Consensus 277 ~~l~~~~f 284 (284)
T cd07860 277 AALAHPFF 284 (284)
T ss_pred HHhcCCCC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=257.08 Aligned_cols=198 Identities=15% Similarity=0.079 Sum_probs=152.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .|.. ...+++|||+++|+|.+++......+++.+++.++.||+.||.|||++||+||||||
T Consensus 62 ~l~~~~~~~i~~~~~-~~~~---~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp 137 (279)
T cd05109 62 VMAGVGSPYVCRLLG-ICLT---STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAA 137 (279)
T ss_pred HHHhcCCCCCceEEE-EEcC---CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 344566777776665 5543 357899999999999999976556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+||+|||+++.........
T Consensus 138 ~Nil~~~~~~~kL~dfG~~~~~~~~~~~~--------------------------------------------------- 166 (279)
T cd05109 138 RNVLVKSPNHVKITDFGLARLLDIDETEY--------------------------------------------------- 166 (279)
T ss_pred ceEEEcCCCcEEECCCCceeeccccccee---------------------------------------------------
Confidence 99999999999999999987642110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~ 209 (279)
T cd05109 167 -------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGA 209 (279)
T ss_pred -------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCC
Confidence 0000133567999999988889999999999999999986
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++.....++.+.+++.+||..||++||++.+++.
T Consensus 210 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 210 KPYDGIP-AREIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred CCCCCCC-HHHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 554332 22233334444344444566788899999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=255.69 Aligned_cols=207 Identities=15% Similarity=0.177 Sum_probs=157.2
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+.+..|++++..++ .+.+ ....+++|||+.|++|.+++++. .++++..+..+++||+.||.|||++||+|+|||
T Consensus 55 ~~l~~l~h~~iv~~~~-~~~~--~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~ 130 (268)
T cd06630 55 RLMARLNHPHIIRMLG-ATCE--DSHFNLFVEWMAGGSVSHLLSKY-GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVK 130 (268)
T ss_pred HHHHHcCCCceehhhc-eecc--CCeEEEEEeccCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 3445567888877776 4433 34689999999999999999654 478999999999999999999999999999999
Q ss_pred CcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 110 PSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 110 P~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
|+||+++..+ .+|++|||.+...........
T Consensus 131 ~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~------------------------------------------------ 162 (268)
T cd06630 131 GANLLIDSTGQRLRIADFGAAARLAAKGTGAG------------------------------------------------ 162 (268)
T ss_pred HHHEEEcCCCCEEEEcccccccccccccccCC------------------------------------------------
Confidence 9999998776 599999999866422200000
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
. ......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 163 -----------------------------------~---~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g 204 (268)
T cd06630 163 -----------------------------------E---FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATA 204 (268)
T ss_pred -----------------------------------c---cccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhC
Confidence 0 0012367889999999988889999999999999999999
Q ss_pred --CCCCChh--hHhHHhhh-cccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 268 --PFSTGEE--KTRTMSSL-RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 268 --pf~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
||..... ........ .....+......++.+.+++.+||..+|.+||++.++++||||.
T Consensus 205 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 205 KPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 6643321 11112111 11222333344567889999999999999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >KOG2096 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-25 Score=223.49 Aligned_cols=310 Identities=17% Similarity=0.215 Sum_probs=232.1
Q ss_pred EEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEE
Q 002801 546 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW 625 (879)
Q Consensus 546 ~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~ 625 (879)
+-|+-.+.....-|....|.+|.+.|++++|+.||++|||++.|+.|+||++..-.+.........++.. ..+.+.|
T Consensus 64 ~~~k~~q~~f~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~d---hpT~V~F 140 (420)
T KOG2096|consen 64 DQWKAKQPTFVHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYD---HPTRVVF 140 (420)
T ss_pred hhhcccCCCcccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCC---CceEEEE
Confidence 3455555555555666678899999999999999999999999999999999874443332222233333 4678999
Q ss_pred eCCCCCeEEEeeCCCcEEEEEcCCCe---EEE---------EeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 626 NSYIKSQIASSNFEGVVQVWDVSRSQ---VLT---------EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 626 ~~~~~~~l~s~~~dg~V~vwd~~~~~---~~~---------~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
.|.....++++-...++++|.+...+ ... .-+.|.-.|-++-..- ++.++++++.|..|.|||++ |
T Consensus 141 apDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-G 218 (420)
T KOG2096|consen 141 APDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-G 218 (420)
T ss_pred CCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-C
Confidence 99888899999888999999875322 111 1123555666666665 78899999999999999999 9
Q ss_pred ceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCc-------eeeEEEccCCCCEEEEEEc-CCCEEEEEE
Q 002801 694 VSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK-------IPLCTLIGHNKTVSYVKFV-DATTLVSAS 764 (879)
Q Consensus 694 ~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~-------~~~~~~~~h~~~V~~v~fs-~~~~l~s~s 764 (879)
+.+.++... ..-...+.+|+ |+++++++.---|++|.+--.+ ..+..++||+++|..++|+ +.+.++|.|
T Consensus 219 q~L~~idtnq~~n~~aavSP~-GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvS 297 (420)
T KOG2096|consen 219 QLLQSIDTNQSSNYDAAVSPD-GRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVS 297 (420)
T ss_pred ceeeeeccccccccceeeCCC-CcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEe
Confidence 999988863 45677889999 9999999999999999974322 2366789999999999999 999999999
Q ss_pred cCCcEEEEecCCCccc-ccCCceEEEe----CCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCC
Q 002801 765 TDNTLKLWDLSMCTSR-VIDTPLHSFT----GHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL 839 (879)
Q Consensus 765 ~D~~i~lwd~~~~~~~-~~~~~~~~~~----~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~ 839 (879)
.||+++|||+...-.. .-...+++.. .-.+.-..+.++|+|+.||... ...+.+|..+.++..-.++
T Consensus 298 kDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e------- 369 (420)
T KOG2096|consen 298 KDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELE------- 369 (420)
T ss_pred cCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHH-------
Confidence 9999999998753111 0012222221 1122333789999999887665 4469999888766544332
Q ss_pred CCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEE
Q 002801 840 SGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 840 ~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw 876 (879)
+.|.+.|++++|+++|. +++||| |..++|+
T Consensus 370 -----~~h~~~Is~is~~~~g~-~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 370 -----DIHSTTISSISYSSDGK-YIATCG-DRYVRVI 399 (420)
T ss_pred -----HhhcCceeeEEecCCCc-EEeeec-ceeeeee
Confidence 57888999999999999 899988 5666665
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=255.04 Aligned_cols=201 Identities=17% Similarity=0.207 Sum_probs=159.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+. .....|++|||+.+++|.+++... ...+++..++.++.||+.||.|||++||+|+||+
T Consensus 52 ~l~~l~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~ 128 (256)
T cd08218 52 VLSNMKHPNIVQYQE-SFE--ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIK 128 (256)
T ss_pred HHHhCCCCCeeeeEe-eec--CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 345567777777665 333 345789999999999999998543 3467999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++........
T Consensus 129 ~~nil~~~~~~~~l~d~~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd08218 129 SQNIFLTKDGTIKLGDFGIARVLNSTVE---------------------------------------------------- 156 (256)
T ss_pred HHHEEEcCCCCEEEeeccceeecCcchh----------------------------------------------------
Confidence 9999999999999999999865311100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 157 --------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~ 198 (256)
T cd08218 157 --------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLK 198 (256)
T ss_pred --------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCC
Confidence 0011357888999999988889999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||............ ..+..++.....+..+.++|.+||+.+|.+||++.++++||||
T Consensus 199 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 199 HAFEAGNMKNLVLKI-IRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred CCccCCCHHHHHHHH-hcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 77655444433333 3333444445567789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=256.25 Aligned_cols=204 Identities=22% Similarity=0.209 Sum_probs=161.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
.+...+|++++..+. .+.. ...+|++|||+++++|.+++... ..+++..++.++.||++||+|||+ +|++|+||+
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~ 127 (264)
T cd06623 52 TLRSCESPYVVKCYG-AFYK--EGEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIK 127 (264)
T ss_pred HHHhcCCCCeeeEEE-EEcc--CCeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCC
Confidence 344455777777666 3333 35689999999999999999654 578999999999999999999999 999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.........
T Consensus 128 ~~ni~~~~~~~~~l~df~~~~~~~~~~~~--------------------------------------------------- 156 (264)
T cd06623 128 PSNLLINSKGEVKIADFGISKVLENTLDQ--------------------------------------------------- 156 (264)
T ss_pred HHHEEECCCCCEEEccCccceecccCCCc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....|+..|+|||.+.+..++.++||||||+++|||++
T Consensus 157 ---------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~ 197 (264)
T cd06623 157 ---------------------------------------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGK 197 (264)
T ss_pred ---------------------------------------ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 012357888999999988889999999999999999999
Q ss_pred -CCCCCh--hhHhHHhhhcccCCCchhhc-cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 -PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 -pf~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||.... ........+.....++.... .+..+.+++.+||.++|++||++.++++||||+..
T Consensus 198 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 198 FPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred CCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 775543 33333344444434444444 66789999999999999999999999999999753
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=254.80 Aligned_cols=192 Identities=12% Similarity=0.122 Sum_probs=145.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ +|.++ ...|++|||+++++|..++......+++..++.++.||+.||+|||++||+||||||
T Consensus 57 ~l~~l~hp~iv~~~~-~~~~~--~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp 133 (262)
T cd05077 57 MMRQVSHKHIVLLYG-VCVRD--VENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCT 133 (262)
T ss_pred HHHhCCCCCEeeEEE-EEecC--CCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCc
Confidence 344568888888776 55433 457999999999999999866556799999999999999999999999999999999
Q ss_pred cceeeccCCC-------eeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 111 SCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 111 ~NIll~~~~~-------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+|||++.++. ++++|||++......
T Consensus 134 ~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~------------------------------------------------ 165 (262)
T cd05077 134 KNILLAREGIDGECGPFIKLSDPGIPITVLSR------------------------------------------------ 165 (262)
T ss_pred ccEEEecCCccCCCCceeEeCCCCCCccccCc------------------------------------------------
Confidence 9999987664 899999987543110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc-CCCCCccCcchhHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLL 262 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDIwSlGvil 262 (879)
....|+..|+|||.+. +..++.++|||||||+|
T Consensus 166 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 199 (262)
T cd05077 166 ----------------------------------------------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTL 199 (262)
T ss_pred ----------------------------------------------ccccccccccChhhhcCCCCCCchhHHHHHHHHH
Confidence 1135678899999987 45689999999999999
Q ss_pred HHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 263 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 263 ~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||++ ||..... .... ....... .......+.+.+|+.+||+.||.+||++.+++++
T Consensus 200 ~el~~~~~~p~~~~~~-~~~~-~~~~~~~-~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 200 WEICYNGEIPLKDKTL-AEKE-RFYEGQC-MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHhCCCCCCCCcch-hHHH-HHHhcCc-cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 99984 5543221 1111 1111111 1111223568899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-28 Score=263.15 Aligned_cols=213 Identities=17% Similarity=0.174 Sum_probs=155.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+....|++++..++ ++.+ ....|++|||+.+++|.+++... ...+++..++.+++||+.||+|||++||+|||||
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk 128 (314)
T cd08216 52 TSRQLQHPNILPYVT-SFIV--DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVK 128 (314)
T ss_pred HHHhcCCcchhhhhh-eeec--CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 444557888877666 3332 34579999999999999999542 3468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||.+..........
T Consensus 129 ~~Nili~~~~~~kl~d~~~~~~~~~~~~~~-------------------------------------------------- 158 (314)
T cd08216 129 ASHILLSGDGKVVLSGLRYSVSMIKHGKRQ-------------------------------------------------- 158 (314)
T ss_pred cceEEEecCCceEEecCccceeeccccccc--------------------------------------------------
Confidence 999999999999999999886531110000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--CCCccCcchhHHHHHHHhhc
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvil~ell~ 267 (879)
...........++..|+|||++.+. .++.++|||||||++|||++
T Consensus 159 ---------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~ 205 (314)
T cd08216 159 ---------------------------------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELAN 205 (314)
T ss_pred ---------------------------------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHh
Confidence 0000000223568889999998763 48999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccC--------CC------------------------chhhccChhhHHHHHHhcCCCCCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRV--------LP------------------------PQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~--------~~------------------------~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
||............+.... .+ +.....++.+.+|+.+||..||++
T Consensus 206 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 285 (314)
T cd08216 206 GHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPES 285 (314)
T ss_pred CCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCc
Confidence 7765443333222221110 00 001112345779999999999999
Q ss_pred CCCHHHHhhcccccCCc
Q 002801 313 RPKMGELLQSEFLNEPR 329 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~ 329 (879)
|||+.++++||||+...
T Consensus 286 Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 286 RPSASQLLNHSFFKQCK 302 (314)
T ss_pred CcCHHHHhcCchHhhhc
Confidence 99999999999998654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=261.18 Aligned_cols=207 Identities=16% Similarity=0.231 Sum_probs=149.6
Q ss_pred eecccccccCCCCCCccccccc------ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
.+....|++++..++ +|.+.. ....|++|||+. ++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 64 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~ 141 (310)
T cd07865 64 ILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKIL 141 (310)
T ss_pred HHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 344556777776665 554322 234699999996 588888866555789999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|+||||+||+++.++.+|++|||++..........
T Consensus 142 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------- 176 (310)
T cd07865 142 HRDMKAANILITKDGILKLADFGLARAFSLSKNSK--------------------------------------------- 176 (310)
T ss_pred ccCCCHHHEEECCCCcEEECcCCCcccccCCcccC---------------------------------------------
Confidence 99999999999999999999999987542210000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ 263 (879)
+......+++..|+|||.+.+.. ++.++|||||||++|
T Consensus 177 -----------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~ 215 (310)
T cd07865 177 -----------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMA 215 (310)
T ss_pred -----------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHH
Confidence 00001236788999999987654 789999999999999
Q ss_pred Hhhc---CCCCChhhHhH--HhhhcccCCCch----------------------------hhccChhhHHHHHHhcCCCC
Q 002801 264 ELFC---PFSTGEEKTRT--MSSLRHRVLPPQ----------------------------LLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 264 ell~---pf~~~~~~~~~--~~~~~~~~~~~~----------------------------~~~~~~~~~~li~~~L~~dP 310 (879)
||++ ||......... ...+.....+.. .....+.+.+||.+||..||
T Consensus 216 el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P 295 (310)
T cd07865 216 EMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDP 295 (310)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCCh
Confidence 9998 55443322111 111111100000 00123556799999999999
Q ss_pred CCCCCHHHHhhcccc
Q 002801 311 SGRPKMGELLQSEFL 325 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~ 325 (879)
.+|||++++++||||
T Consensus 296 ~~R~t~~e~l~h~~f 310 (310)
T cd07865 296 AKRIDADTALNHDFF 310 (310)
T ss_pred hhccCHHHHhcCCCC
Confidence 999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-28 Score=258.97 Aligned_cols=201 Identities=16% Similarity=0.214 Sum_probs=152.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|..++... ..+++..++.++.||+.||.|||++||+|+||||
T Consensus 53 ~l~~~~h~~i~~~~~-~~~~--~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p 128 (286)
T cd07847 53 MLKQLKHPNLVNLIE-VFRR--KRKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKP 128 (286)
T ss_pred HHHhCCCCCEeeeee-EEee--CCEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCh
Confidence 445567888877666 4433 34679999999999998887554 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||++........
T Consensus 129 ~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 155 (286)
T cd07847 129 ENILITKQGQIKLCDFGFARILTGPGD----------------------------------------------------- 155 (286)
T ss_pred hhEEEcCCCcEEECccccceecCCCcc-----------------------------------------------------
Confidence 999999999999999999865421100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 156 -------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~ 198 (286)
T cd07847 156 -------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQ 198 (286)
T ss_pred -------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCC
Confidence 0011356889999999876 458999999999999999999
Q ss_pred -CCCCChhhHhHHhhhc---c-----------------cCCC---------chhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 -PFSTGEEKTRTMSSLR---H-----------------RVLP---------PQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~---~-----------------~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.............. . ...+ ......+..+.+|+.+||.++|++||++.
T Consensus 199 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 278 (286)
T cd07847 199 PLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCE 278 (286)
T ss_pred CCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHH
Confidence 6654333222211100 0 0000 01223456788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
|++.||||
T Consensus 279 eil~~~~f 286 (286)
T cd07847 279 ELLEHPYF 286 (286)
T ss_pred HHhcCCCC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3e-28 Score=224.50 Aligned_cols=204 Identities=17% Similarity=0.201 Sum_probs=160.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|+|++..+. +.. ....+.+|.||| ..+|..+...-.+.++.+.++.++.|+++||.|+|++++.||||||
T Consensus 54 llkelkhknivrl~d-vlh--sdkkltlvfe~c-dqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkp 129 (292)
T KOG0662|consen 54 LLKELKHKNIVRLHD-VLH--SDKKLTLVFEFC-DQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKP 129 (292)
T ss_pred HHHHhhhcceeehhh-hhc--cCceeEEeHHHh-hHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCc
Confidence 344456777777766 433 334678999999 6689999988788899999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
.|.||+.+|.+|++|||+++.++.+...
T Consensus 130 qnllin~ngelkladfglarafgipvrc---------------------------------------------------- 157 (292)
T KOG0662|consen 130 QNLLINRNGELKLADFGLARAFGIPVRC---------------------------------------------------- 157 (292)
T ss_pred ceEEeccCCcEEecccchhhhcCCceEe----------------------------------------------------
Confidence 9999999999999999999887554111
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
....+-|.||++|.++.|.. |+++.|+||.|||+.||..
T Consensus 158 --------------------------------------ysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanag 199 (292)
T KOG0662|consen 158 --------------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAG 199 (292)
T ss_pred --------------------------------------eeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcC
Confidence 01236699999999999987 8999999999999999988
Q ss_pred -CCCCChhhHhHHhhhcc-------cCCC-----------c------hhh----ccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLRH-------RVLP-----------P------QLL----LKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~-------~~~~-----------~------~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
|.+++.+.......+-. ...| | .+. ......++|++++|.-+|.+|+++++
T Consensus 200 rplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaea 279 (292)
T KOG0662|consen 200 RPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEA 279 (292)
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHH
Confidence 77776655444333211 0000 0 111 12234579999999999999999999
Q ss_pred HhhcccccCC
Q 002801 319 LLQSEFLNEP 328 (879)
Q Consensus 319 vl~hp~~~~~ 328 (879)
+++||||...
T Consensus 280 alqhpyf~d~ 289 (292)
T KOG0662|consen 280 ALQHPYFSDF 289 (292)
T ss_pred HhcCcccccc
Confidence 9999999864
|
|
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=258.52 Aligned_cols=202 Identities=17% Similarity=0.189 Sum_probs=158.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+.+ ....|+||||++|++|.+++.. .++++..+..++.|++.||+|||+.||+|+||+|
T Consensus 55 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p 129 (277)
T cd06640 55 VLSQCDSPYVTKYYG-SYLK--GTKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKA 129 (277)
T ss_pred HHHhCCCCCEeeEEE-EEEE--CCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCCh
Confidence 445567888877777 4433 3468999999999999999965 4589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 130 ~Nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 156 (277)
T cd06640 130 ANVLLSEQGDVKLADFGVAGQLTDTQI----------------------------------------------------- 156 (277)
T ss_pred hhEEEcCCCCEEEcccccceeccCCcc-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|+|||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~ 199 (277)
T cd06640 157 -------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 199 (277)
T ss_pred -------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCC
Confidence 0011357888999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||...... .....+.....+......+..+.+++.+||..+|++||++.++++||||...
T Consensus 200 p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 200 PNSDMHPM-RVLFLIPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred CCCCcChH-hHhhhhhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 66433322 2222222222333333455778899999999999999999999999999653
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=259.36 Aligned_cols=199 Identities=18% Similarity=0.147 Sum_probs=153.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIV 95 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l 95 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|.+++... ...+++..++.++.||+.||
T Consensus 60 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 136 (291)
T cd05094 60 LLTNLQHEHIVKFYG-VCGD--GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGM 136 (291)
T ss_pred HHhcCCCCCcceEEE-EEcc--CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHH
Confidence 445567888877666 5543 34689999999999999999542 23478999999999999999
Q ss_pred HhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcccccccccc
Q 002801 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 96 ~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
.|||++||+||||||+|||++.++.++++|||++.........
T Consensus 137 ~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~------------------------------------- 179 (291)
T cd05094 137 VYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY------------------------------------- 179 (291)
T ss_pred HHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCcee-------------------------------------
Confidence 9999999999999999999999999999999998653211000
Q ss_pred CCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcc
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (879)
.......|+..|+|||.+.+..++.++||
T Consensus 180 ---------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 208 (291)
T cd05094 180 ---------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDV 208 (291)
T ss_pred ---------------------------------------------------ecCCCCCcceeecChHHhccCCCCchhhH
Confidence 00011356788999999998889999999
Q ss_pred hhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 256 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 256 wSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|||||++|||++ ||...... .....+.....+......+..+.+++.+||..+|.+||++.++++
T Consensus 209 ~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 209 WSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 999999999997 66444332 233334444343333445678899999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=253.57 Aligned_cols=199 Identities=17% Similarity=0.181 Sum_probs=153.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .+.+ ....|++|||++|++|.+++......+++..++.|+.||+.||.|||++||+||||||
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p 128 (256)
T cd05059 52 VMMKLSHPNLVQLYG-VCTK--QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAA 128 (256)
T ss_pred HHHhCCCCCEEEEEE-EEcC--CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccH
Confidence 344567788777665 4432 3468999999999999999966555789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 129 ~ni~i~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------------------- 156 (256)
T cd05059 129 RNCLVGEDNVVKVSDFGLARYVLDDQYT---------------------------------------------------- 156 (256)
T ss_pred hhEEECCCCcEEECCcccceeccccccc----------------------------------------------------
Confidence 9999999999999999998653211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~ 199 (256)
T cd05059 157 -------------------------------------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGK 199 (256)
T ss_pred -------------------------------------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCC
Confidence 0000123457999999998889999999999999999997
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||..... ......+.....++.+...++.+.+++.+||..+|++|||+.++++.
T Consensus 200 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 200 MPYERFSN-SEVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred CCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 6644333 23333333333334444567889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=251.45 Aligned_cols=199 Identities=19% Similarity=0.202 Sum_probs=156.9
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--------CCCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--------~~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
+....|++++..+. ++.+ ....|++|||+++++|.++++.. ...+++.+++.++.||+.||+|||++||
T Consensus 50 l~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 126 (262)
T cd00192 50 MKKLGHPNVVRLLG-VCTE--EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKF 126 (262)
T ss_pred HhhcCCCChheeee-eecC--CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCc
Confidence 33445778777666 5544 55689999999999999999665 4678999999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+|+||||+||+++.++.+|++|||.+.........
T Consensus 127 ~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 161 (262)
T cd00192 127 VHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYY--------------------------------------------- 161 (262)
T ss_pred ccCccCcceEEECCCCcEEEccccccccccccccc---------------------------------------------
Confidence 99999999999999999999999999764221000
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
.......++..|+|||.+.+..++.++|||||||++|
T Consensus 162 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 198 (262)
T cd00192 162 -------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLW 198 (262)
T ss_pred -------------------------------------------ccccCCCcCccccCHHHhccCCcchhhccHHHHHHHH
Confidence 0001235678899999998888999999999999999
Q ss_pred Hhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 264 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 264 ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||++ ||.... .......+......+.....++.+.+++.+||..+|.+||++.+++.+
T Consensus 199 ~l~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 199 EIFTLGATPYPGLS-NEEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 9987 665443 333333444344444445567889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=252.67 Aligned_cols=192 Identities=16% Similarity=0.192 Sum_probs=145.3
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ ++.+ ....|++|||+.+++|.+++......+++..++.++.||+.||+|||++||+||||||+
T Consensus 53 l~~~~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~ 129 (258)
T cd05078 53 MSQLSHKHLVLNYG-VCVC--GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAK 129 (258)
T ss_pred HHhCCCCChhheee-EEEe--CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccc
Confidence 44567888887776 4443 34679999999999999999766567899999999999999999999999999999999
Q ss_pred ceeeccCCC--------eeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 112 CFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 112 NIll~~~~~--------vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
||+++.++. ++++|||++......
T Consensus 130 nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~------------------------------------------------ 161 (258)
T cd05078 130 NVLLIREEDRKTGNPPFIKLSDPGISITVLPK------------------------------------------------ 161 (258)
T ss_pred eEEEecccccccCCCceEEecccccccccCCc------------------------------------------------
Confidence 999987765 578888876432100
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 262 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil 262 (879)
....++..|+|||++.+. .++.++|||||||++
T Consensus 162 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l 195 (258)
T cd05078 162 ----------------------------------------------EILLERIPWVPPECIENPQNLSLAADKWSFGTTL 195 (258)
T ss_pred ----------------------------------------------hhccccCCccCchhccCCCCCCchhhHHHHHHHH
Confidence 113567889999999874 489999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||++ +++............... ...+...++++.+|+.+||+.+|++|||++++++.
T Consensus 196 ~~l~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 256 (258)
T cd05078 196 WEIFSGGDKPLSALDSQKKLQFYEDR--HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRD 256 (258)
T ss_pred HHHHcCCCCChhhccHHHHHHHHHcc--ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence 99999 232222222222211111 11222344678999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=258.89 Aligned_cols=199 Identities=18% Similarity=0.123 Sum_probs=152.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC------------CCCChhHHHHHHHHHHHHHHhh
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK------------RSVDVYECLHIFRQIVEIVYAA 98 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~------------~~l~~~~~~~i~~qi~~~l~~l 98 (879)
.+....|++++..++ .+.+ ...+|++|||+.+++|.+++.... ..+++..++.++.||+.||+||
T Consensus 60 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~l 136 (288)
T cd05093 60 LLTNLQHEHIVKFYG-VCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL 136 (288)
T ss_pred HHHhCCCCCcceEEE-EEec--CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 445567888877666 5543 456899999999999999985321 2489999999999999999999
Q ss_pred hhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 99 Hs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
|++||+||||||+|||++.++.+|++|||+++........
T Consensus 137 H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~---------------------------------------- 176 (288)
T cd05093 137 ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY---------------------------------------- 176 (288)
T ss_pred HhCCeeecccCcceEEEccCCcEEeccCCccccccCCcee----------------------------------------
Confidence 9999999999999999999999999999998653211000
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhH
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (879)
.......++..|+|||.+.+..++.++|||||
T Consensus 177 ------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwsl 208 (288)
T cd05093 177 ------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSL 208 (288)
T ss_pred ------------------------------------------------ecCCCCCccccccCHHHhccCCCCchhhHHHH
Confidence 00011245778999999988889999999999
Q ss_pred HHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 259 Gvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||++|||++ ||....... ....+.....++.....++.+.+|+.+||.++|.+|||+.+++.
T Consensus 209 G~il~~l~t~g~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 209 GVVLWEIFTYGKQPWYQLSNNE-VIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred HHHHHHHHhCCCCCCCCCCHHH-HHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 999999996 564443333 33333333333333456678999999999999999999999854
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-27 Score=256.76 Aligned_cols=205 Identities=16% Similarity=0.103 Sum_probs=156.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.+ ....|+||||+. ++|.+++.....++++.+++.++.|++.||.|||++||+||||||
T Consensus 68 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p 143 (308)
T cd06634 68 FLQKLRHPNTIQYRG-CYLR--EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKA 143 (308)
T ss_pred HHHhCCCCCcccEEE-EEEc--CCeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 445567788777665 4443 346799999996 588887755446789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++......
T Consensus 144 ~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------------- 168 (308)
T cd06634 144 GNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------------- 168 (308)
T ss_pred HhEEECCCCcEEECCcccceeecCc-------------------------------------------------------
Confidence 9999999999999999988542110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
....|+..|+|||.+. ...++.++|||||||++|||++
T Consensus 169 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~ 209 (308)
T cd06634 169 ---------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209 (308)
T ss_pred ---------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHc
Confidence 1135788899999985 3458899999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
||.........................+..+.+||.+||..+|.+||++.+++.|||+.....+..
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~~~~ 278 (308)
T cd06634 210 RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTV 278 (308)
T ss_pred CCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCChhH
Confidence 765543333222222222222222345567889999999999999999999999999987554443
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.1e-28 Score=260.14 Aligned_cols=202 Identities=18% Similarity=0.200 Sum_probs=150.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ ++.+.....+|++|||+.+ +|.+++......+++.+++.++.||+.||+|||++||+|+||||+
T Consensus 58 l~~l~h~ni~~~~~-~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~ 135 (293)
T cd07843 58 LLKLQHPNIVTVKE-VVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTS 135 (293)
T ss_pred HHhcCCCCEEEEEE-EEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHH
Confidence 44456777776655 4444444679999999975 999998665457899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||+++.......
T Consensus 136 nili~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------------ 161 (293)
T cd07843 136 NLLLNNRGILKICDFGLAREYGSPLK------------------------------------------------------ 161 (293)
T ss_pred HEEECCCCcEEEeecCceeeccCCcc------------------------------------------------------
Confidence 99999999999999999866422100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~--- 267 (879)
......+++.|+|||.+.+.. ++.++|||||||++|||++
T Consensus 162 ------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~ 205 (293)
T cd07843 162 ------------------------------------PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKP 205 (293)
T ss_pred ------------------------------------ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCC
Confidence 001135688899999987654 6899999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--------------------c--------CCCchhhc--cChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 PFSTGEEKTRTMSSLRH--------------------R--------VLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--------------------~--------~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||............... . .....+.. .++.+.++|.+||+.+|++|||+.
T Consensus 206 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ 285 (293)
T cd07843 206 LFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAE 285 (293)
T ss_pred CCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHH
Confidence 55433221111110000 0 00011111 256678999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
|+++||||
T Consensus 286 ell~~~~f 293 (293)
T cd07843 286 DALKHPYF 293 (293)
T ss_pred HHhcCCCC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=257.41 Aligned_cols=200 Identities=18% Similarity=0.138 Sum_probs=153.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIV 95 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l 95 (879)
.+...+|++++..++ .+.+. ...++++||+.+++|.+++... ...+++..++.++.|++.||
T Consensus 61 ~~~~l~h~~iv~~~~-~~~~~--~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL 137 (283)
T cd05091 61 MRSRLQHPNIVCLLG-VVTKE--QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGM 137 (283)
T ss_pred HHhcCCCCCcCeEEE-EEcCC--CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHH
Confidence 445567888887776 55433 3579999999999999998321 23578889999999999999
Q ss_pred HhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcccccccccc
Q 002801 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 96 ~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
+|||++||+||||||+||+++.++.+|++|||+++.........
T Consensus 138 ~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------------ 181 (283)
T cd05091 138 EFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYK------------------------------------ 181 (283)
T ss_pred HHHHHcCccccccchhheEecCCCceEecccccccccccchhee------------------------------------
Confidence 99999999999999999999999999999999987542110000
Q ss_pred CCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcc
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDI 255 (879)
......+++.|+|||.+.+..++.++||
T Consensus 182 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 209 (283)
T cd05091 182 ----------------------------------------------------LMGNSLLPIRWMSPEAIMYGKFSIDSDI 209 (283)
T ss_pred ----------------------------------------------------eccCccCCccccCHHHHhcCCCCcchhH
Confidence 0011245778999999988889999999
Q ss_pred hhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 256 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 256 wSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||||++|||++ ||.... .......+......+.....+..+.+|+.+||+.+|.+||++.++++.
T Consensus 210 ~slG~~l~el~~~g~~p~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~ 279 (283)
T cd05091 210 WSYGVVLWEVFSYGLQPYCGYS-NQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR 279 (283)
T ss_pred HHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 999999999997 554433 333444444444444445667778999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.5e-28 Score=269.66 Aligned_cols=156 Identities=15% Similarity=0.163 Sum_probs=122.5
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcc
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
.+++.++..++.||+.||+|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~------------------- 293 (400)
T cd05105 233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY------------------- 293 (400)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccc-------------------
Confidence 4778889999999999999999999999999999999999999999999998653211000
Q ss_pred hhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccc
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
.......++..
T Consensus 294 ---------------------------------------------------------------------~~~~~~~~~~~ 304 (400)
T cd05105 294 ---------------------------------------------------------------------VSKGSTFLPVK 304 (400)
T ss_pred ---------------------------------------------------------------------cccCCcCCCcc
Confidence 00011356778
Q ss_pred eeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCC
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
|+|||.+.+..++.++|||||||+||||++ ||............+.....++.....++.+.+++.+||..||++|
T Consensus 305 y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 384 (400)
T cd05105 305 WMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKR 384 (400)
T ss_pred eEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHC
Confidence 999999998889999999999999999985 6654433333344444444444444566788999999999999999
Q ss_pred CCHHHHhh
Q 002801 314 PKMGELLQ 321 (879)
Q Consensus 314 pt~~evl~ 321 (879)
|++.++.+
T Consensus 385 Pt~~~l~~ 392 (400)
T cd05105 385 PSFLHLSD 392 (400)
T ss_pred cCHHHHHH
Confidence 99998875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-28 Score=257.73 Aligned_cols=200 Identities=14% Similarity=0.079 Sum_probs=151.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------CCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ .+. .....|++|||+.+++|.+++.+.. ..+++..+..++.|++.||+|||+.
T Consensus 62 ~l~~l~~~~iv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 138 (277)
T cd05062 62 VMKEFNCHHVVRLLG-VVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN 138 (277)
T ss_pred HHHhCCCCCeeeEEE-EEc--CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 344567888877665 443 3346899999999999999985421 2356788999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+|+||||+||+++.++.++++|||+++........
T Consensus 139 ~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------- 175 (277)
T cd05062 139 KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------------- 175 (277)
T ss_pred CcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------------------------------------
Confidence 9999999999999999999999999998653211000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 176 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 210 (277)
T cd05062 176 ---------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 210 (277)
T ss_pred ---------------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence 00011245778999999998889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||.... .............++.....++.+.+++.+||+.+|++|||+.|++++
T Consensus 211 l~el~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 211 LWEIATLAEQPYQGMS-NEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999996 664433 233333333333333344566778999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.7e-28 Score=240.82 Aligned_cols=207 Identities=17% Similarity=0.247 Sum_probs=163.2
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
..|||-.||.-. |. ..+..+|+|.||+.||+|--++.+. ++++++.++.+..+|+.||.|||++|||.||||..|+
T Consensus 307 asn~pflvglhs--cf-qtesrlffvieyv~ggdlmfhmqrq-rklpeeharfys~ei~lal~flh~rgiiyrdlkldnv 382 (593)
T KOG0695|consen 307 ASNNPFLVGLHS--CF-QTESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNV 382 (593)
T ss_pred ccCCCeEEehhh--hh-cccceEEEEEEEecCcceeeehhhh-hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccce
Confidence 357777777665 43 3455789999999999998888554 6899999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
||+..|++|++|+|+|+.--.+ +
T Consensus 383 lldaeghikltdygmcke~l~~----g----------------------------------------------------- 405 (593)
T KOG0695|consen 383 LLDAEGHIKLTDYGMCKEGLGP----G----------------------------------------------------- 405 (593)
T ss_pred EEccCCceeecccchhhcCCCC----C-----------------------------------------------------
Confidence 9999999999999999862111 0
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
-....++|||-|.|||+++|..|++++|+|+|||++|||++ ||.
T Consensus 406 ---------------------------------d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfd 452 (593)
T KOG0695|consen 406 ---------------------------------DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFD 452 (593)
T ss_pred ---------------------------------cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcc
Confidence 01245799999999999999999999999999999999999 884
Q ss_pred C------ChhhHhHH--hhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC------HHHHhhcccccCCcCchHHHH
Q 002801 271 T------GEEKTRTM--SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEPRDSMEERE 336 (879)
Q Consensus 271 ~------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt------~~evl~hp~~~~~~~~~~e~~ 336 (879)
- .++.+.+. -++..++..|. ..+.++..++...|.+||.+|.. ++++..|+||+.+.....|++
T Consensus 453 ivgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leqk 530 (593)
T KOG0695|consen 453 IVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQK 530 (593)
T ss_pred eecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhhc
Confidence 2 12222222 22333333333 44567889999999999999953 689999999998776655543
|
|
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.5e-28 Score=255.19 Aligned_cols=200 Identities=17% Similarity=0.131 Sum_probs=158.8
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
..+.+.+|++++..+. .+. .....|++|||+.|++|.+++... .++++.++..++.||++||.|||++||+|+|||
T Consensus 52 ~~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~ 127 (258)
T cd05578 52 RILQELNHPFLVNLWY-SFQ--DEENMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIK 127 (258)
T ss_pred HHHHhCCCCChHHHHH-hhc--CCCeEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 3455678888877666 332 344689999999999999999665 578999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||.+........
T Consensus 128 ~~nil~~~~~~~~l~d~~~~~~~~~~~~---------------------------------------------------- 155 (258)
T cd05578 128 PDNILLDEQGHVHITDFNIATKVTPDTL---------------------------------------------------- 155 (258)
T ss_pred HHHeEEcCCCCEEEeecccccccCCCcc----------------------------------------------------
Confidence 9999999999999999999865321100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 156 ---------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~ 196 (258)
T cd05578 156 ---------------------------------------TTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGK 196 (258)
T ss_pred ---------------------------------------ccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCC
Confidence 011356888999999988889999999999999999998
Q ss_pred -CCCCChh--hHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH--HHHhhcccc
Q 002801 268 -PFSTGEE--KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM--GELLQSEFL 325 (879)
Q Consensus 268 -pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~--~evl~hp~~ 325 (879)
||..... .......... ..+..+...++.+.++|.+||..||.+||++ .|+++||||
T Consensus 197 ~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 197 RPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred CCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 7754432 2222222221 2233333456789999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-27 Score=257.79 Aligned_cols=206 Identities=13% Similarity=0.086 Sum_probs=155.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------CCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ .+.+ ....|++|||+.+|+|.+++++.. ..++...+..++.||+.||.|||++
T Consensus 62 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 138 (288)
T cd05061 62 VMKGFTCHHVVRLLG-VVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK 138 (288)
T ss_pred HHHhCCCCCeeeEEE-EEcC--CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 344556777777666 4433 346899999999999999995321 2346678899999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.++++|||+++........
T Consensus 139 ~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~------------------------------------------- 175 (288)
T cd05061 139 KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYY------------------------------------------- 175 (288)
T ss_pred CCcCCCCChheEEEcCCCcEEECcCCccccccccccc-------------------------------------------
Confidence 9999999999999999999999999998753211000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 176 ---------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~ 210 (288)
T cd05061 176 ---------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210 (288)
T ss_pred ---------------------------------------------cccCCCcccccccCHHHhccCCCChHhHHHHHHHH
Confidence 00011245677999999988889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh------cccccCC
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SEFLNEP 328 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~------hp~~~~~ 328 (879)
+|||++ ||..... ......+.....++.....++.+.+++.+||+.+|++|||+.++++ ||||.+.
T Consensus 211 l~el~~~~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 211 LWEITSLAEQPYQGLSN-EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence 999997 6654332 2333333333333333455678999999999999999999999986 8998764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-27 Score=254.66 Aligned_cols=198 Identities=16% Similarity=0.134 Sum_probs=153.6
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-------------CCCCChhHHHHHHHHHHHHHHhh
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-------------KRSVDVYECLHIFRQIVEIVYAA 98 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-------------~~~l~~~~~~~i~~qi~~~l~~l 98 (879)
+....|++++..++ .+.+ ....|++|||++|++|.++|... ...+++.++..++.||+.||.||
T Consensus 62 l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l 138 (280)
T cd05049 62 LTNFQHENIVKFYG-VCTE--GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL 138 (280)
T ss_pred HHhcCCCCchheee-EEec--CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHH
Confidence 44557788777766 4443 35689999999999999999543 23578899999999999999999
Q ss_pred hhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 99 Hs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
|++||+||||||+||+++.++.+|++|||+++........ .
T Consensus 139 H~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~-~-------------------------------------- 179 (280)
T cd05049 139 ASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYY-R-------------------------------------- 179 (280)
T ss_pred hhCCeeccccccceEEEcCCCeEEECCcccceecccCcce-e--------------------------------------
Confidence 9999999999999999999999999999998653111000 0
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhH
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (879)
......++..|+|||++.+..++.++|||||
T Consensus 180 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~sl 210 (280)
T cd05049 180 -------------------------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSF 210 (280)
T ss_pred -------------------------------------------------cCCCCcccceecChhhhccCCcchhhhHHHH
Confidence 0011245778999999999999999999999
Q ss_pred HHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 259 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 259 Gvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||++|||++ ||...... .....+.....++.....+..+.+++.+||..||.+||++.|+++
T Consensus 211 G~il~e~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 211 GVVLWEIFTYGKQPWYGLSNE-EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 999999996 76544333 333333444444444456788999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=256.90 Aligned_cols=195 Identities=16% Similarity=0.156 Sum_probs=151.8
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---------------CCCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---------------PKRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---------------~~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
+|++++..++ ++.+ ...+|++|||+.+++|.+++.. ....+++..++.++.||+.||+|||+
T Consensus 74 ~h~~i~~~~~-~~~~--~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~ 150 (293)
T cd05053 74 KHKNIINLLG-VCTQ--EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS 150 (293)
T ss_pred CCCCeeeEEE-EEcC--CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 6888877666 5543 3468999999999999999842 23568999999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
.||+||||||+||+++.++.+|++|||+++.........
T Consensus 151 ~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------------- 189 (293)
T cd05053 151 KKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYR----------------------------------------- 189 (293)
T ss_pred CCccccccceeeEEEcCCCeEEeCcccccccccccccee-----------------------------------------
Confidence 999999999999999999999999999997642110000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||.+.+..++.++|||||||
T Consensus 190 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 222 (293)
T cd05053 190 -----------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 222 (293)
T ss_pred -----------------------------------------------ccCCCCCCccccCHHHhccCCcCcccceeehhh
Confidence 001113356799999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
++|||++ ||.... .......+.....++.....+..+.+|+.+||..+|.+|||+.+++++
T Consensus 223 il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 223 LLWEIFTLGGSPYPGIP-VEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHhcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 9999986 664433 233334444444444445567889999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=265.09 Aligned_cols=212 Identities=16% Similarity=0.167 Sum_probs=153.3
Q ss_pred ceeecccccccCCCCCCcccccc---cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 29 GVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
...+...+|++++..++ ++... ....+|++|||+. ++|.++++. ..+++..++.++.||+.||+|||++||+|
T Consensus 54 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH 129 (336)
T cd07849 54 IKILRRFKHENIIGILD-IIRPPSFESFNDVYIVQELME-TDLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLH 129 (336)
T ss_pred HHHHHhCCCCCcCchhh-eeecccccccceEEEEehhcc-cCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 33445556788777665 43322 2235799999996 488888854 46899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++..+.+|++|||+++.........
T Consensus 130 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~---------------------------------------------- 163 (336)
T cd07849 130 RDLKPSNLLLNTNCDLKICDFGLARIADPEHDHT---------------------------------------------- 163 (336)
T ss_pred cCCCHHHEEECCCCCEEECcccceeecccccccc----------------------------------------------
Confidence 9999999999999999999999986532110000
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~e 264 (879)
.......||+.|+|||.+.+ ..++.++|||||||++||
T Consensus 164 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~e 202 (336)
T cd07849 164 -----------------------------------------GFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAE 202 (336)
T ss_pred -----------------------------------------CCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHH
Confidence 00022478999999998765 458999999999999999
Q ss_pred hhc---CCCCChhhHhHH--hhhcc------------------------cCC---CchhhccChhhHHHHHHhcCCCCCC
Q 002801 265 LFC---PFSTGEEKTRTM--SSLRH------------------------RVL---PPQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~--~~~~~------------------------~~~---~~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
|++ ||.......... ..+.. ... .......++.+.+|+.+||+.+|.+
T Consensus 203 l~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 282 (336)
T cd07849 203 MLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHK 282 (336)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhh
Confidence 999 664332111000 00000 000 0011234677889999999999999
Q ss_pred CCCHHHHhhcccccCCcCc
Q 002801 313 RPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~~~ 331 (879)
|||+.++++||||.....+
T Consensus 283 Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 283 RITVEEALAHPYLEQYHDP 301 (336)
T ss_pred CcCHHHHhcCccccccCCC
Confidence 9999999999999876543
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.9e-27 Score=252.97 Aligned_cols=199 Identities=15% Similarity=0.176 Sum_probs=154.3
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
..|++++..++ .+.+ ....|++|||+.|++|.++++.. .+++..++.++.||+.||.|||+.||+|+||+|+||+
T Consensus 59 ~~~~~vi~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~ 133 (277)
T cd06917 59 SQPPNITKYYG-SYLK--GPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANIL 133 (277)
T ss_pred CCCCCeeeEee-eeee--CCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEE
Confidence 35788877665 4433 44689999999999999998553 6899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.++++|||++........
T Consensus 134 i~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------------- 156 (277)
T cd06917 134 VTNTGNVKLCDFGVAALLNQNSS--------------------------------------------------------- 156 (277)
T ss_pred EcCCCCEEEccCCceeecCCCcc---------------------------------------------------------
Confidence 99999999999999865421100
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---CCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......|+..|+|||.+.+. .++.++|||||||++|+|++ ||.
T Consensus 157 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 203 (277)
T cd06917 157 ---------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYS 203 (277)
T ss_pred ---------------------------------ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCC
Confidence 00123678899999998754 47999999999999999999 775
Q ss_pred CChhhHhHHhhhcccCCCchhh-ccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
........ ..+.....+.... ..+..+.+++.+||..||.+||++.+++.||||....
T Consensus 204 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 204 DVDAFRAM-MLIPKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred CCChhhhh-hccccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 44332222 2222222222212 2567788999999999999999999999999997654
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=256.39 Aligned_cols=199 Identities=16% Similarity=0.222 Sum_probs=146.4
Q ss_pred ccccCCCCCCccccccc---ccCceEEEEeeCCcchhhhhcCC----CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 36 DHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~---~~~~~lv~e~~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
+|++++..++ ++.... ....|++|||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||
T Consensus 59 ~~~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl 136 (295)
T cd07837 59 ESIYIVRLLD-VEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDL 136 (295)
T ss_pred CCCCccceee-eEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 4566666555 333221 2237999999986 898887432 245899999999999999999999999999999
Q ss_pred CCcceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 109 RPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 109 KP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||+||+++. ++.+|++|||+++.......
T Consensus 137 ~~~nil~~~~~~~~kl~dfg~~~~~~~~~~-------------------------------------------------- 166 (295)
T cd07837 137 KPQNLLVDKQKGLLKIADLGLGRAFSIPVK-------------------------------------------------- 166 (295)
T ss_pred ChHHEEEecCCCeEEEeecccceecCCCcc--------------------------------------------------
Confidence 999999998 88999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell 266 (879)
..+...++++|+|||.+.+. .++.++|||||||++|||+
T Consensus 167 ----------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~ 206 (295)
T cd07837 167 ----------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMS 206 (295)
T ss_pred ----------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHH
Confidence 00112568889999988764 4799999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc---------------------C-CCc----hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 267 C---PFSTGEEKTRTMSSLRHR---------------------V-LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~---------------------~-~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
+ ||................ . .+. .....++.+.+||.+||.+||.+||++.
T Consensus 207 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~ 286 (295)
T cd07837 207 RKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAK 286 (295)
T ss_pred cCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHH
Confidence 9 665543333222211100 0 000 1123567788999999999999999999
Q ss_pred HHhhccccc
Q 002801 318 ELLQSEFLN 326 (879)
Q Consensus 318 evl~hp~~~ 326 (879)
|++.||||+
T Consensus 287 eil~~~~~~ 295 (295)
T cd07837 287 AALTHPYFD 295 (295)
T ss_pred HHhcCCCcC
Confidence 999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=253.10 Aligned_cols=212 Identities=17% Similarity=0.184 Sum_probs=159.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+..|++++..+. .+. .....|++|||+.|++|.+++.+. +.+++.+++.++.||+.||+|||++||+|+||+|
T Consensus 46 ~l~~~~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~ 121 (265)
T cd05579 46 ILSQAQSPYVVKLYY-SFQ--GKKNLYLVMEYLPGGDLASLLENV-GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKP 121 (265)
T ss_pred HHHhCCCcchhHHHH-hee--cCcEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCH
Confidence 344456777777655 332 345689999999999999999654 3789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++.......... .
T Consensus 122 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~------------------------------------------------- 151 (265)
T cd05579 122 DNILIDSNGHLKLTDFGLSKVGLVRRQIN-L------------------------------------------------- 151 (265)
T ss_pred HHeEEcCCCCEEEEecccchhcccCcccc-c-------------------------------------------------
Confidence 99999999999999999986532110000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
...........++..|+|||.+.+..++.++|||||||++|||++
T Consensus 152 --------------------------------~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~ 199 (265)
T cd05579 152 --------------------------------NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIP 199 (265)
T ss_pred --------------------------------ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 000000122467888999999988889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH---HHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~evl~hp~~~~~ 328 (879)
||..................++.....++.+.+++.+||+.+|.+|||+ .+++.||||+..
T Consensus 200 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 200 PFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred CCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 7755443332222222222223322346788999999999999999999 999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.8e-27 Score=223.95 Aligned_cols=267 Identities=16% Similarity=0.236 Sum_probs=225.1
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+++..|+.--+-+-.++.-+ |++.||.++|++..++.+...-|+++.|-+-+|||.-++.. +..+.|
T Consensus 33 isa~kd~~pmlr~g~tgdwi-----gtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgde--------lhsf~h 99 (334)
T KOG0278|consen 33 ISASKDGKPMLRNGDTGDWI-----GTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDE--------LHSFEH 99 (334)
T ss_pred EEeccCCCchhccCCCCCcE-----EeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhh--------hhhhhh
Confidence 66666766655555555444 45669999999999999999999999999999999876422 234568
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe-EEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCce
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVS 695 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~-~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~ 695 (879)
+..|..++|+. +.++|++|+.+..++|||++..+ +..++.+|.+.|..+-|-. ..+.++++++|++|++||.+++..
T Consensus 100 khivk~~af~~-ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~-eD~~iLSSadd~tVRLWD~rTgt~ 177 (334)
T KOG0278|consen 100 KHIVKAVAFSQ-DSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCH-EDKCILSSADDKTVRLWDHRTGTE 177 (334)
T ss_pred hheeeeEEecc-cchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEec-cCceEEeeccCCceEEEEeccCcE
Confidence 88999999997 58999999999999999998764 5678899999999999998 678888889999999999999999
Q ss_pred EEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEec
Q 002801 696 IGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDL 774 (879)
Q Consensus 696 i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~ 774 (879)
++++..+.+|+++-++++ |++|.+ ...+.|.+||..+... ++.+... ..|.+...+ +...+++|+.|..++.||.
T Consensus 178 v~sL~~~s~VtSlEvs~d-G~ilTi-a~gssV~Fwdaksf~~-lKs~k~P-~nV~SASL~P~k~~fVaGged~~~~kfDy 253 (334)
T KOG0278|consen 178 VQSLEFNSPVTSLEVSQD-GRILTI-AYGSSVKFWDAKSFGL-LKSYKMP-CNVESASLHPKKEFFVAGGEDFKVYKFDY 253 (334)
T ss_pred EEEEecCCCCcceeeccC-CCEEEE-ecCceeEEeccccccc-eeeccCc-cccccccccCCCceEEecCcceEEEEEec
Confidence 999999999999999999 766554 5567899999998773 6655432 357777777 7789999999999999999
Q ss_pred CCCcccccCCceEEE-eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCc
Q 002801 775 SMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPA 828 (879)
Q Consensus 775 ~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~ 828 (879)
.++ ..+..+ ++|.++|-||.|+|+|...|+||+||+|++|....++.-
T Consensus 254 ~Tg------eEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 254 NTG------EEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred cCC------ceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCch
Confidence 998 556665 899999999999999999999999999999998766544
|
|
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=251.95 Aligned_cols=205 Identities=22% Similarity=0.265 Sum_probs=156.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+. .....|+++||+++++|.+++.+. ..+++.+++.|+.||+.||.|||+.||+|+||||
T Consensus 52 ~~~~l~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~ 127 (264)
T cd06626 52 VLELLKHPNLVKYYG-VEV--HREKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKP 127 (264)
T ss_pred HHHhCCCCChhheee-eEe--cCCEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCH
Confidence 445567787777666 332 345689999999999999999654 4579999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++............
T Consensus 128 ~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~------------------------------------------------- 158 (264)
T cd06626 128 ANIFLDHNGVIKLGDFGCAVKLKNNTTTMGE------------------------------------------------- 158 (264)
T ss_pred HHEEECCCCCEEEcccccccccCCCCCcccc-------------------------------------------------
Confidence 9999999999999999998764222100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC---CCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDIwSlGvil~ell~ 267 (879)
......++..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 159 -------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~ 201 (264)
T cd06626 159 -------------------------------------EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT 201 (264)
T ss_pred -------------------------------------cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHh
Confidence 001135688899999998766 8999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||............+.....+ |......+.+.+++.+||+.+|.+||++.+++.|||+
T Consensus 202 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 202 GKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred CCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 775543332222222222222 2222346788999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=253.07 Aligned_cols=207 Identities=16% Similarity=0.113 Sum_probs=160.4
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+.+.+|++++..++ .+.+......|++|||+.|++|.+++... ..+++..++.++.||+.||.|||++||+|+||
T Consensus 55 i~~l~~l~h~~i~~~~~-~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl 132 (264)
T cd06653 55 IQLLKNLRHDRIVQYYG-CLRDPEEKKLSIFVEYMPGGSIKDQLKAY-GALTENVTRRYTRQILQGVSYLHSNMIVHRDI 132 (264)
T ss_pred HHHHHHcCCCCcceEEE-EEEcCCCCEEEEEEEeCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCC
Confidence 33455667888887666 44444445688999999999999998654 45899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||+++........ .
T Consensus 133 ~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~-~------------------------------------------------ 163 (264)
T cd06653 133 KGANILRDSAGNVKLGDFGASKRIQTICMS-G------------------------------------------------ 163 (264)
T ss_pred CHHHEEEcCCCCEEECcccccccccccccc-C------------------------------------------------
Confidence 999999999999999999998763211000 0
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 205 (264)
T cd06653 164 --------------------------------------TGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTE 205 (264)
T ss_pred --------------------------------------ccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhC
Confidence 00012467889999999988889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..................+..+...++.+.+++.+||. +|..||++.+++.|||+
T Consensus 206 ~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 206 KPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred CCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 7755444444444333333333444566789999999999 57999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=253.54 Aligned_cols=191 Identities=17% Similarity=0.193 Sum_probs=144.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|+|++..++ +|.+. ...|+||||+++++|..++.+....+++..++.++.||+.||+|||++||+||||||+
T Consensus 70 ~~~l~h~niv~~~~-~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~ 146 (274)
T cd05076 70 MSQVSHIHLAFVHG-VCVRG--SENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAK 146 (274)
T ss_pred HhcCCCCCeeeEEE-EEEeC--CceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcc
Confidence 44567888887776 66543 4679999999999999999765567899999999999999999999999999999999
Q ss_pred ceeeccCC-------CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 112 CFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 112 NIll~~~~-------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|||++..+ .+|++|||++......
T Consensus 147 Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~------------------------------------------------- 177 (274)
T cd05076 147 NILLARLGLAEGTSPFIKLSDPGVSFTALSR------------------------------------------------- 177 (274)
T ss_pred cEEEeccCcccCccceeeecCCccccccccc-------------------------------------------------
Confidence 99997644 3789999987432100
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ 263 (879)
....++..|+|||.+.+ ..++.++|||||||++|
T Consensus 178 ---------------------------------------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~ 212 (274)
T cd05076 178 ---------------------------------------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLL 212 (274)
T ss_pred ---------------------------------------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHH
Confidence 11245777999999876 45899999999999999
Q ss_pred Hhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 264 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 264 ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||++ ||........ ..........+ ....+.+.++|.+||..+|++||++.+++++
T Consensus 213 el~~~g~~p~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 213 EICFDGEVPLKERTPSEK-ERFYEKKHRLP--EPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHhCCCCCccccChHHH-HHHHHhccCCC--CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 9963 6644322211 11111111111 1234678899999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=254.88 Aligned_cols=200 Identities=14% Similarity=0.140 Sum_probs=150.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC------CCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~------~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
.+...+|++++..++ ++.+ ....|++|||+.|++|.+++.... ..+++..++.++.||+.||.|||++||+
T Consensus 62 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 138 (277)
T cd05036 62 IMSKFNHQNIVRLIG-VSFE--RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFI 138 (277)
T ss_pred HHHhCCCCCEeeEEE-EEcc--CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344567888877666 4433 345799999999999999985432 2588999999999999999999999999
Q ss_pred cccCCCcceeeccCC---CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 105 VHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 105 HrDlKP~NIll~~~~---~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||||||+||+++..+ .+|++|||+++.........
T Consensus 139 H~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------ 176 (277)
T cd05036 139 HRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYR------------------------------------------ 176 (277)
T ss_pred ecccchheEEEeccCCCcceEeccCccccccCCcccee------------------------------------------
Confidence 999999999998654 58999999997641110000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......+..|+|||++.+..++.++|||||||+
T Consensus 177 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i 210 (277)
T cd05036 177 ----------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL 210 (277)
T ss_pred ----------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH
Confidence 0001133567999999998889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||...... ..+..+.....++.+...++.+.+++.+||..+|++||++.++++|
T Consensus 211 l~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 211 LWEIFSLGYMPYPGRTNQ-EVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999996 77543332 2233332222233334556788999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=261.64 Aligned_cols=207 Identities=19% Similarity=0.181 Sum_probs=151.0
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC----CCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
..+...+|++++..++ .+.+......|+||||+++ +|.+++.. ....+++..++.|+.||+.||+|||++||+|
T Consensus 54 ~~l~~l~h~~i~~~~~-~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h 131 (316)
T cd07842 54 ALLRELKHENVVSLVE-VFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLH 131 (316)
T ss_pred HHHHhcCCCCccceEE-EEeCCCCceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEee
Confidence 3455667888887776 5655545678999999965 67776632 2236899999999999999999999999999
Q ss_pred ccCCCcceeecc----CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 106 HNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 106 rDlKP~NIll~~----~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
|||||+||+++. .+.+|++|||+++........
T Consensus 132 ~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------- 168 (316)
T cd07842 132 RDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP------------------------------------------- 168 (316)
T ss_pred CCCCHHHEEEcCCCCccceEEECCCccccccCCCccc-------------------------------------------
Confidence 999999999999 899999999998764221000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 260 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGv 260 (879)
........++.+|+|||++.+. .++.++|||||||
T Consensus 169 --------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 204 (316)
T cd07842 169 --------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGC 204 (316)
T ss_pred --------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHH
Confidence 0001224678999999988774 4899999999999
Q ss_pred HHHHhhc---CCCCChhhH--------hHH----hhh------------------------cccCCC-c-------hhhc
Q 002801 261 LLFELFC---PFSTGEEKT--------RTM----SSL------------------------RHRVLP-P-------QLLL 293 (879)
Q Consensus 261 il~ell~---pf~~~~~~~--------~~~----~~~------------------------~~~~~~-~-------~~~~ 293 (879)
+||||++ ||....... ..+ ..+ .....+ . ....
T Consensus 205 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (316)
T cd07842 205 IFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKK 284 (316)
T ss_pred HHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccC
Confidence 9999999 664332211 000 000 000000 0 0013
Q ss_pred cChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 294 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 294 ~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
....+.+++.+||..||++|||+.|+++||||
T Consensus 285 ~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 285 PDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 44568899999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=256.19 Aligned_cols=200 Identities=21% Similarity=0.170 Sum_probs=154.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----------------CCCCChhHHHHHHHHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----------------KRSVDVYECLHIFRQIVEI 94 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----------------~~~l~~~~~~~i~~qi~~~ 94 (879)
.+....|++++..++ .+. .....|++|||+.+++|.+++... ...+++.+++.++.||+.|
T Consensus 60 ~l~~l~h~niv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a 136 (283)
T cd05090 60 LMAELHHPNIVCLLG-VVT--QEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAG 136 (283)
T ss_pred HHhhCCCCCeeeEEE-EEe--cCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHH
Confidence 445567788877665 333 234679999999999999998421 1247888999999999999
Q ss_pred HHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccc
Q 002801 95 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 174 (879)
Q Consensus 95 l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (879)
|.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 137 l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------------ 180 (283)
T cd05090 137 MEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYY------------------------------------ 180 (283)
T ss_pred HHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcce------------------------------------
Confidence 99999999999999999999999999999999998764211000
Q ss_pred cCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCc
Q 002801 175 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 254 (879)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sD 254 (879)
.......++..|+|||.+.+..++.++|
T Consensus 181 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 208 (283)
T cd05090 181 ----------------------------------------------------RVQPKSLLPIRWMPPEAIMYGKFSSDSD 208 (283)
T ss_pred ----------------------------------------------------ecccCCCccceecChHHhccCCCCchhh
Confidence 0001124567799999998888999999
Q ss_pred chhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 255 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 255 IwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||||||+||||++ ||.... ....+..+.....++.....++.+.+++.+||..||.+||++.+++++
T Consensus 209 v~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 209 IWSFGVVLWEIFSFGLQPYYGFS-NQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred hHHHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 9999999999997 665443 334455555554555555677889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=255.50 Aligned_cols=204 Identities=17% Similarity=0.159 Sum_probs=155.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..+. .+. .....|++|||++|++|.+++.+.. ..+++.+++.++.||+.||.|||++||+|+|||
T Consensus 46 ~l~~l~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~ 122 (277)
T cd05577 46 ILEKVSSRFIVSLAY-AFE--TKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLK 122 (277)
T ss_pred HHHhCCCCCEeeeee-EEe--cCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 344556777777655 333 2346899999999999999985432 368999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||.+.......
T Consensus 123 p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------------- 149 (277)
T cd05577 123 PENVLLDDHGNVRISDLGLAVELKGGK----------------------------------------------------- 149 (277)
T ss_pred HHHEEECCCCCEEEccCcchhhhccCC-----------------------------------------------------
Confidence 999999999999999999886531100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|+|++
T Consensus 150 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~ 191 (277)
T cd05577 150 --------------------------------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGR 191 (277)
T ss_pred --------------------------------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCC
Confidence 0011256778999999988889999999999999999999
Q ss_pred -CCCCChhh---HhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 268 -PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
||...... ........ ....+.....++.+.++|.+||+.+|.+|| ++.+++.||||....
T Consensus 192 ~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 192 SPFRQRKEKVEKEELKRRTL-EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred CCCCCCcccccHHHHHhccc-cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 77543321 11111111 111222234567899999999999999999 888899999998644
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-28 Score=259.71 Aligned_cols=254 Identities=13% Similarity=0.124 Sum_probs=167.3
Q ss_pred ccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
+.+.||++ |+-.+..-+|.+|. .+.| ...+|+||+|+.||++-.+|-+- +-|++..++.|+.++.+|+++.|..
T Consensus 675 HVKAERDI--LAEADn~WVVrLyy-SFQD--kdnLYFVMdYIPGGDmMSLLIrm-gIFeE~LARFYIAEltcAiesVHkm 748 (1034)
T KOG0608|consen 675 HVKAERDI--LAEADNEWVVRLYY-SFQD--KDNLYFVMDYIPGGDMMSLLIRM-GIFEEDLARFYIAELTCAIESVHKM 748 (1034)
T ss_pred hhhhhhhh--HhhcCCcceEEEEE-Eecc--CCceEEEEeccCCccHHHHHHHh-ccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 44556664 34445556666666 3333 44689999999999999998554 5789999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
|+|||||||+||||+.+|++||+|||+|.-+.... + .| .+..
T Consensus 749 GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH-d----------------------sk--YYq~------------- 790 (1034)
T KOG0608|consen 749 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH-D----------------------SK--YYQE------------- 790 (1034)
T ss_pred cceecccCccceEEccCCceeeeeccccccceecc-c----------------------cc--cccC-------------
Confidence 99999999999999999999999999997642110 0 00 0000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.++....+.... -.+.+...+.|.+.++ ..++..-...-.++||+-|+|||++....|+..+|+||.|||
T Consensus 791 gdH~RqDSmep~---~e~~d~~~~lkvL~~r-------a~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvi 860 (1034)
T KOG0608|consen 791 GDHHRQDSMEPS---PEWADISKCLKVLERR-------AMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVI 860 (1034)
T ss_pred CCccccccCCCc---hhhccccccchHHHHH-------HHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHH
Confidence 000000000000 0000011111222211 111111112235799999999999999999999999999999
Q ss_pred HHHhhc---CCCCChhhHhHHhhhcc--cCCCchhhccChhhHHHHHHhcCCCCCCCC---CHHHHhhcccccCCcC
Q 002801 262 LFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 330 (879)
Q Consensus 262 l~ell~---pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp---t~~evl~hp~~~~~~~ 330 (879)
||||+. ||.........+..+.- ..-.+.-.+.++++.++|.+++ .+++.|. .+++|..||||+.+.-
T Consensus 861 l~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 861 LYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred HHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence 999998 77554444433333222 2223344567788899998854 4567774 4678999999998653
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-25 Score=249.62 Aligned_cols=254 Identities=14% Similarity=0.178 Sum_probs=191.7
Q ss_pred ccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEecCcccCcCcccccce-EEecc
Q 002801 539 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMAS 616 (879)
Q Consensus 539 ~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~-~~~~~ 616 (879)
|..++.+++|+..+...... +.+|.+.|.+++|+|+ +.+||||+.|++|+||++............++ ....|
T Consensus 50 GG~~gvI~L~~~~r~~~v~~-----L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH 124 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIK-----LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGH 124 (568)
T ss_pred CCceeEEEeeecCCCceEEE-----EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecC
Confidence 45678899998776554433 4589999999999996 78999999999999999975321111111122 23458
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceE
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i 696 (879)
...|.+++|+|.....|++++.||+|+|||+.+++.+..+. |...|.+++|+| ++.+|++++.|++|+|||+++++.+
T Consensus 125 ~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Slswsp-dG~lLat~s~D~~IrIwD~Rsg~~i 202 (568)
T PTZ00420 125 KKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNI-KGNLLSGTCVGKHMHIIDPRKQEIA 202 (568)
T ss_pred CCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECC-CCCEEEEEecCCEEEEEECCCCcEE
Confidence 88999999999745567899999999999999998877775 667899999999 9999999999999999999999999
Q ss_pred EEEecCCc-e-----EEEEeeCCCCCEEEEEeCCC----eEEEEEcCCCceeeEEEccCC--CCEEEEEEc-CCCEEEEE
Q 002801 697 GTIKTKAN-V-----CCVQFPLDSGRSLAFGSADH----RIYYYDLRNSKIPLCTLIGHN--KTVSYVKFV-DATTLVSA 763 (879)
Q Consensus 697 ~~~~~~~~-v-----~~v~~~p~~~~~l~tgs~d~----~I~iwDl~~~~~~~~~~~~h~--~~V~~v~fs-~~~~l~s~ 763 (879)
.++..+.. + ....|+++ +.+|++++.|+ +|++||+++...++..+..+. ..+...-.. ++.++++|
T Consensus 203 ~tl~gH~g~~~s~~v~~~~fs~d-~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsG 281 (568)
T PTZ00420 203 SSFHIHDGGKNTKNIWIDGLGGD-DNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIG 281 (568)
T ss_pred EEEecccCCceeEEEEeeeEcCC-CCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEE
Confidence 88875432 2 23345577 67888877764 799999997665676654333 333333334 68899999
Q ss_pred EcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC
Q 002801 764 STDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD 805 (879)
Q Consensus 764 s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 805 (879)
+.|++|++|++..+.. ..+..+. +..+...++|.|..
T Consensus 282 kGD~tIr~~e~~~~~~----~~l~~~~-s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 282 KGDGNCRYYQHSLGSI----RKVNEYK-SCSPFRSFGFLPKQ 318 (568)
T ss_pred ECCCeEEEEEccCCcE----Eeecccc-cCCCccceEEcccc
Confidence 9999999999986522 2333433 56678889999964
|
|
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-27 Score=258.32 Aligned_cols=201 Identities=14% Similarity=0.221 Sum_probs=149.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++. .....|+||||+.+ +|.+++.+....+++..++.++.||+.||.|||++||+||||||
T Consensus 56 ~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p 131 (291)
T cd07844 56 LLKDLKHANIVTLHD-IIH--TKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKP 131 (291)
T ss_pred HHhhCCCcceeeEEE-EEe--cCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCH
Confidence 445567888877666 443 33478999999975 99999966556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++....+..
T Consensus 132 ~nil~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------------- 158 (291)
T cd07844 132 QNLLISERGELKLADFGLARAKSVPSK----------------------------------------------------- 158 (291)
T ss_pred HHEEEcCCCCEEECccccccccCCCCc-----------------------------------------------------
Confidence 999999999999999999854211100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 159 -------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~ 201 (291)
T cd07844 159 -------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGR 201 (291)
T ss_pred -------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCC
Confidence 0011245778999999876 458999999999999999998
Q ss_pred -CCCCChhhHhHHhhh----cc--------------------cCC-Cch----hhccC--hhhHHHHHHhcCCCCCCCCC
Q 002801 268 -PFSTGEEKTRTMSSL----RH--------------------RVL-PPQ----LLLKF--PKEASFCLWLLHPEPSGRPK 315 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~----~~--------------------~~~-~~~----~~~~~--~~~~~li~~~L~~dP~~Rpt 315 (879)
||............+ .. ... +.. ..... ..+.+++.+||+++|.+|||
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps 281 (291)
T cd07844 202 PLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRIS 281 (291)
T ss_pred CCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccC
Confidence 664433111111100 00 000 000 01122 66779999999999999999
Q ss_pred HHHHhhcccc
Q 002801 316 MGELLQSEFL 325 (879)
Q Consensus 316 ~~evl~hp~~ 325 (879)
+.++++||||
T Consensus 282 ~~e~l~~~~f 291 (291)
T cd07844 282 AAEAMKHPYF 291 (291)
T ss_pred HHHHhcCCCC
Confidence 9999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-27 Score=250.60 Aligned_cols=203 Identities=15% Similarity=0.059 Sum_probs=154.3
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
+...+...+|++++..++ .+.+ ..+|++|||+++++|.+++.... ..+++..++.++.||+.||.|||++||+|+
T Consensus 46 e~~~l~~l~h~~iv~~~~-~~~~---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~ 121 (257)
T cd05040 46 EAAIMHSLDHENLIRLYG-VVLT---HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHR 121 (257)
T ss_pred HHHHHhhcCCCCccceeE-EEcC---CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 334456667888877666 4443 57899999999999999996544 568999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||+||+++.++.+|++|||+++..........
T Consensus 122 di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~---------------------------------------------- 155 (257)
T cd05040 122 DLAARNILLASDDKVKIGDFGLMRALPQNEDHYV---------------------------------------------- 155 (257)
T ss_pred ccCcccEEEecCCEEEecccccccccccccccee----------------------------------------------
Confidence 9999999999999999999999876422100000
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell 266 (879)
......++..|+|||.+.+..++.++|||||||++|||+
T Consensus 156 -----------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~ 194 (257)
T cd05040 156 -----------------------------------------MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMF 194 (257)
T ss_pred -----------------------------------------cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHH
Confidence 000124577899999998888999999999999999998
Q ss_pred c----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 267 C----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 267 ~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+ ||...................+.....+..+.+++.+||..+|++||++.++++
T Consensus 195 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 195 TYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred hCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 6 664433332222222122222233345678889999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-27 Score=257.43 Aligned_cols=200 Identities=16% Similarity=0.128 Sum_probs=155.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|++|||+.| +|.+++.....++++.++..++.||+.||.|||++||+||||||
T Consensus 78 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p 153 (317)
T cd06635 78 FLQRIKHPNSIEYKG-CYLR--EHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKA 153 (317)
T ss_pred HHHhCCCCCEEEEEE-EEee--CCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCc
Confidence 445567888877666 5543 3357999999975 78787755556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++......
T Consensus 154 ~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------------- 178 (317)
T cd06635 154 GNILLTEPGQVKLADFGSASIASPA------------------------------------------------------- 178 (317)
T ss_pred ccEEECCCCCEEEecCCCccccCCc-------------------------------------------------------
Confidence 9999999999999999987542110
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecccccc---CCCCCccCcchhHHHHHHHhhc
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDIwSlGvil~ell~ 267 (879)
....|+..|+|||.+. +..++.++|||||||++|||++
T Consensus 179 ---------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~ 219 (317)
T cd06635 179 ---------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 219 (317)
T ss_pred ---------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHh
Confidence 1136788899999974 3558999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||..................+......++.+.+++.+||+.+|.+||++.++++|+|+-..
T Consensus 220 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 220 RKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred CCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 7765543333333333332222333455678999999999999999999999999998653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=252.37 Aligned_cols=190 Identities=16% Similarity=0.163 Sum_probs=145.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .|.. ...|++|||+.+++|.+++.+....+++..++.+++||+.||+|||++||+||||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp 129 (259)
T cd05037 54 LMSQLSHKHLVKLYG-VCVR---DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCG 129 (259)
T ss_pred HHHcCCCcchhheee-EEec---CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCcc
Confidence 345567888877666 4543 457999999999999999976555789999999999999999999999999999999
Q ss_pred cceeeccCC-------CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 111 SCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 111 ~NIll~~~~-------~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+|||++..+ .+|++|||++......
T Consensus 130 ~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------------------------------------ 161 (259)
T cd05037 130 KNILVARYGLNEGYVPFIKLSDPGIPITVLSR------------------------------------------------ 161 (259)
T ss_pred ceEEEecCccccCCceeEEeCCCCcccccccc------------------------------------------------
Confidence 999999887 7999999998653110
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--CCCccCcchhHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 261 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvi 261 (879)
....++..|+|||.+.+. .++.++|||||||+
T Consensus 162 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~ 195 (259)
T cd05037 162 ----------------------------------------------EERVERIPWIAPECIRNGQASLTIAADKWSFGTT 195 (259)
T ss_pred ----------------------------------------------cccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence 012456679999999876 68999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||++ ||...... ............+. .....+.+++.+||..+|.+|||+.++++
T Consensus 196 ~~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 196 LLEICSNGEEPLSTLSSS-EKERFYQDQHRLPM--PDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHhCCCCCcccCCch-hHHHHHhcCCCCCC--CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999987 44333211 11111111111111 12267889999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=255.91 Aligned_cols=201 Identities=17% Similarity=0.081 Sum_probs=150.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .|........|++|||+.+++|.+++... .+++.+++.++.|++.||+|||++||+||||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp 135 (283)
T cd05080 59 ILKTLYHENIVKYKG-CCSEQGGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAA 135 (283)
T ss_pred HHHhCCCCCEeeEEE-EEecCCCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccCh
Confidence 445567888877666 55544455689999999999999999553 589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++..........
T Consensus 136 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~-------------------------------------------------- 165 (283)
T cd05080 136 RNVLLDNDRLVKIGDFGLAKAVPEGHEYYR-------------------------------------------------- 165 (283)
T ss_pred heEEEcCCCcEEEeecccccccCCcchhhc--------------------------------------------------
Confidence 999999999999999999876421100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 -------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~ 208 (283)
T cd05080 166 -------------------------------------VREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCD 208 (283)
T ss_pred -------------------------------------cCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCC
Confidence 0001134567999999988889999999999999999998
Q ss_pred CCCCChhhHhHH--------------hhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKTRTM--------------SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.........+ ..+.....++.....+..+.+++.+||..+|++|||+.++++
T Consensus 209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 209 SKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred CCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 653322111100 011111122223345678899999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=253.29 Aligned_cols=202 Identities=15% Similarity=0.093 Sum_probs=152.4
Q ss_pred eecccccccCCCCCCccccc----ccccCceEEEEeeCCcchhhhhcC-----CCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~lv~e~~~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ .|.. .....++++|||+.+++|.+++.. ....+++..++.++.||+.||+|||++
T Consensus 53 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 131 (272)
T cd05075 53 CMKEFDHPNVMRLIG-VCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK 131 (272)
T ss_pred HHHhCCCCCcceEEE-EEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345567888877665 4432 122357999999999999998721 224589999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+|||++.++.+|++|||+++........
T Consensus 132 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------- 168 (272)
T cd05075 132 SFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY------------------------------------------- 168 (272)
T ss_pred CeeccccchhheEEcCCCCEEECCCCcccccCcccce-------------------------------------------
Confidence 9999999999999999999999999998764211000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......+++.|+|||.+.+..++.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~i 203 (272)
T cd05075 169 ---------------------------------------------RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVT 203 (272)
T ss_pred ---------------------------------------------ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHH
Confidence 00011234667999999998889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||.... .......+.....++.....+..+.+++.+||..+|.+|||+.+++++
T Consensus 204 l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 204 MWEIATRGQTPYPGVE-NSEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHcCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999987 664433 333334444443334444566778999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.4e-27 Score=255.31 Aligned_cols=192 Identities=13% Similarity=0.096 Sum_probs=148.2
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
+|++++..++ .+.+ ...+|++|||+++++|.+++.+.. ..+++..++.|+.||+.||+|||+
T Consensus 61 ~hp~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~ 137 (297)
T cd05089 61 HHPNIINLLG-ACEN--RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE 137 (297)
T ss_pred CCCchhheEE-EEcc--CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5788877666 4433 346899999999999999995421 257889999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.+|++|||++...... .
T Consensus 138 ~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-----~--------------------------------------- 173 (297)
T cd05089 138 KQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY-----V--------------------------------------- 173 (297)
T ss_pred CCcccCcCCcceEEECCCCeEEECCcCCCccccce-----e---------------------------------------
Confidence 99999999999999999999999999998532100 0
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
.......+..|+|||.+.+..++.++|||||||
T Consensus 174 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~ 206 (297)
T cd05089 174 -----------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGV 206 (297)
T ss_pred -----------------------------------------------ccCCCCcCccccCchhhccCCCCchhhHHHHHH
Confidence 000012245699999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
++|||++ ||....... ....+.....++.....++.+.+|+.+||..+|.+||+++++++.
T Consensus 207 il~el~t~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 207 LLWEIVSLGGTPYCGMTCAE-LYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred HHHHHHcCCCCCCCCCCHHH-HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999985 775544333 333333333334444567789999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-27 Score=262.01 Aligned_cols=211 Identities=17% Similarity=0.121 Sum_probs=152.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|+|++..++ ++.+ +...|++|||+.+++|.+++.+. ...+++..++.++.||+.||+|||++||+|||||
T Consensus 52 ~~~~l~h~niv~~~~-~~~~--~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlk 128 (328)
T cd08226 52 LSHFFRHPNIMTSWT-VFTT--GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIK 128 (328)
T ss_pred HHHhCCCCCcceEee-eEec--CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 344567888888777 5543 44679999999999999998543 2358999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.++++||+.+.......... ..
T Consensus 129 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~------------- 160 (328)
T cd08226 129 ASHILISGDGLVSLSGLSHLYSLVRNGQKA-----------------------------------KV------------- 160 (328)
T ss_pred HHHEEEeCCCcEEEechHHHhhhhccCccc-----------------------------------cc-------------
Confidence 999999999999999998653321100000 00
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--CCCccCcchhHHHHHHHhhc
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvil~ell~ 267 (879)
... ......++..|+|||++.+. .++.++|||||||++|||++
T Consensus 161 --------------------------------~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~ 205 (328)
T cd08226 161 --------------------------------VYD---FPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELAT 205 (328)
T ss_pred --------------------------------ccc---ccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHh
Confidence 000 00011345679999999764 47899999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCC---------------------------------------------CchhhccChhhH
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVL---------------------------------------------PPQLLLKFPKEA 299 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~ 299 (879)
||............+..... .+......+.+.
T Consensus 206 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (328)
T cd08226 206 GRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQ 285 (328)
T ss_pred CCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHH
Confidence 66544333332222211100 111223446688
Q ss_pred HHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 300 SFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
+|+.+||..||++|||+.|+++||||..
T Consensus 286 ~li~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 286 NLVELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred HHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence 9999999999999999999999999964
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-27 Score=280.87 Aligned_cols=203 Identities=15% Similarity=0.189 Sum_probs=167.0
Q ss_pred cCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC------CCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.+.+.+++-+|+|+|...+ +|-+ ...++|++|||+||+|..+|++. ...+...+.+.++.||+.|+.||++
T Consensus 744 ~Ea~~m~~f~HpNiv~liG-v~l~--~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~ 820 (1025)
T KOG1095|consen 744 KEALLMSKFDHPNIVSLIG-VCLD--SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES 820 (1025)
T ss_pred HHHHHHhcCCCcceeeEEE-eecC--CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh
Confidence 4555678899999998777 9987 55789999999999999999776 5678999999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+++|||||-..|+||+....|||+|||+|+++-..+.- ++
T Consensus 821 ~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yy----r~------------------------------------ 860 (1025)
T KOG1095|consen 821 KHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYY----RK------------------------------------ 860 (1025)
T ss_pred CCCcCcchhhhheeecccCcEEEcccchhHhhhhchhe----ec------------------------------------
Confidence 99999999999999999999999999999964211100 00
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
....+-...|||||.+..+.++.++|||||||
T Consensus 861 ------------------------------------------------~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGV 892 (1025)
T KOG1095|consen 861 ------------------------------------------------HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGV 892 (1025)
T ss_pred ------------------------------------------------cCccccceecCCHHHHhhcccccccchhhhHH
Confidence 00012234699999999999999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||+++ ||....+.......+..+ .-+.+..++..+.+++..||+.+|++||++..+++
T Consensus 893 llWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 893 LLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 9999999 886555544444455556 44555678888999999999999999999999987
|
|
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=253.92 Aligned_cols=202 Identities=17% Similarity=0.166 Sum_probs=152.8
Q ss_pred cccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhc-CcccccC
Q 002801 33 THGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHNV 108 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~-givHrDl 108 (879)
...+|++++..++ .+.+ ....|++|||++ ++|.+++.. ....+++..++.++.||+.||+|||++ +|+||||
T Consensus 55 ~~~~~~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dl 130 (283)
T cd06617 55 RSVDCPYTVTFYG-ALFR--EGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDV 130 (283)
T ss_pred HHcCCCCeeeeeE-EEec--CCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCC
Confidence 3457788877776 4432 346899999996 678777632 335689999999999999999999997 9999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+||+|||++.......
T Consensus 131 kp~nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------------------------- 158 (283)
T cd06617 131 KPSNVLINRNGQVKLCDFGISGYLVDSV---------------------------------------------------- 158 (283)
T ss_pred CHHHEEECCCCCEEEeeccccccccccc----------------------------------------------------
Confidence 9999999999999999999986531100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC----CCCCccCcchhHHHHHHH
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLLFE 264 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDIwSlGvil~e 264 (879)
..+...|+..|+|||.+.+ ..++.++|||||||++||
T Consensus 159 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~ 199 (283)
T cd06617 159 ---------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIE 199 (283)
T ss_pred ---------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHH
Confidence 0012357888999998865 447899999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhcccCCCchh-hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
|++ ||..................+..+ ...+..+.++|.+||..+|.+||++.++++||||....
T Consensus 200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 200 LATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred HHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 999 775433322222222222222221 23467789999999999999999999999999998654
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=252.36 Aligned_cols=202 Identities=15% Similarity=0.119 Sum_probs=153.2
Q ss_pred eecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcC-----CCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ .+.+.. ...++++|||+.+++|..++.. ....+++..++.++.||+.||+|||++
T Consensus 54 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~ 132 (273)
T cd05035 54 CMKDFDHPNVMKLIG-VCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR 132 (273)
T ss_pred HHHhCCCCCeeeEEe-eeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 445567888877665 443222 2347999999999999998832 223689999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.+|++|||+++.........
T Consensus 133 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------ 170 (273)
T cd05035 133 NFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYR------------------------------------------ 170 (273)
T ss_pred CeeccccchheEEECCCCeEEECCccceeecccccccc------------------------------------------
Confidence 99999999999999999999999999987532110000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
......++..|+|||.+.+..++.++|||||||+
T Consensus 171 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~i 204 (273)
T cd05035 171 ----------------------------------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 204 (273)
T ss_pred ----------------------------------------------ccccccCCccccCHhhcccCCCCcccchHHHHHH
Confidence 0001133567999999988889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||.... .......+.....++.+...++.+.+++.+||..||.+||++.+++++
T Consensus 205 l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 205 MWEIATRGQTPYPGVE-NHEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred HHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999986 554433 333444444444444455677889999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=250.75 Aligned_cols=198 Identities=14% Similarity=0.111 Sum_probs=152.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+. .....|++|||+.+++|.+++++ ....+++..++.++.||+.||+|||+.||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~ 130 (261)
T cd05072 54 LMKTLQHDKLVRLYA-VVT--KEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLR 130 (261)
T ss_pred HHHhCCCCCeeeEEE-EEc--CCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 344567888877666 333 23457999999999999999954 33568899999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.........
T Consensus 131 p~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 159 (261)
T cd05072 131 AANVLVSESLMCKIADFGLARVIEDNEYT--------------------------------------------------- 159 (261)
T ss_pred hhhEEecCCCcEEECCCccceecCCCcee---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g 201 (261)
T cd05072 160 --------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYG 201 (261)
T ss_pred --------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccC
Confidence 0011234677999999988889999999999999999996
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||... ........+......+.....+..+.+++.+||..+|++||+++++++
T Consensus 202 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 202 KIPYPGM-SNSDVMSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred CCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 66433 233334444444344444456678899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=257.35 Aligned_cols=204 Identities=15% Similarity=0.164 Sum_probs=157.1
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ .+.+ ....|+|+||+++++|.+++.+. .+++.+++.++.||+.||.|||++||+|+||||+
T Consensus 70 l~~l~hp~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~ 144 (293)
T cd06647 70 MRENKHPNIVNYLD-SYLV--GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSD 144 (293)
T ss_pred HhhcCCCCeeehhh-eeee--CCcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHH
Confidence 44556777777666 4433 34689999999999999999653 5789999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++++|||++........
T Consensus 145 Nili~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------------ 170 (293)
T cd06647 145 NILLGMDGSVKLTDFGFCAQITPEQS------------------------------------------------------ 170 (293)
T ss_pred HEEEcCCCCEEEccCcceeccccccc------------------------------------------------------
Confidence 99999999999999998865321100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|++.|+|||.+.+..++.++|||||||++|||++ |
T Consensus 171 ------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~p 214 (293)
T cd06647 171 ------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPP 214 (293)
T ss_pred ------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 0012367889999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccC-CCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcC
Q 002801 269 FSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~ 330 (879)
|................. ..+.....++.+.+++.+||..+|.+||++.+++.||||.....
T Consensus 215 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~ 277 (293)
T cd06647 215 YLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKP 277 (293)
T ss_pred CCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcc
Confidence 755433222211111111 11122234567889999999999999999999999999986553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.5e-27 Score=250.21 Aligned_cols=200 Identities=12% Similarity=0.108 Sum_probs=155.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+. .....|++|||+.+++|.+++......+++.+++.++.|++.||+|||++||+|+||||
T Consensus 58 ~l~~l~h~~i~~~~~-~~~--~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p 134 (266)
T cd05033 58 IMGQFDHPNIIRLEG-VVT--KSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAA 134 (266)
T ss_pred HHHhCCCCCcceEeE-EEe--cCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCc
Confidence 445567888877666 333 24468999999999999999976656789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||+++........ .
T Consensus 135 ~nili~~~~~~~l~dfg~~~~~~~~~~~--~------------------------------------------------- 163 (266)
T cd05033 135 RNILVNSNLVCKVSDFGLSRRLEDSEAT--Y------------------------------------------------- 163 (266)
T ss_pred ceEEEcCCCCEEECccchhhcccccccc--e-------------------------------------------------
Confidence 9999999999999999999764211000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 -------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~ 206 (266)
T cd05033 164 -------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGE 206 (266)
T ss_pred -------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCC
Confidence 0001133567999999988889999999999999999986
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||..... ......+......+.....++.+.+++.+||..+|++||++.+++++
T Consensus 207 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 207 RPYWDMSN-QDVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred CCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 6644332 23333344333334445667889999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-27 Score=256.10 Aligned_cols=201 Identities=18% Similarity=0.216 Sum_probs=148.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++.+ ....|++|||+. ++|.+++......+++.+++.++.||+.||.|||+.||+|+||||
T Consensus 56 ~l~~l~h~ni~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp 131 (291)
T cd07870 56 LLKGLKHANIVLLHD-IIHT--KETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKP 131 (291)
T ss_pred HHHhcCCCCEeEEEE-EEec--CCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCh
Confidence 344567888876665 4433 346899999995 677777755445678999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++.......
T Consensus 132 ~Nil~~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------------- 158 (291)
T cd07870 132 QNLLISYLGELKLADFGLARAKSIPSQ----------------------------------------------------- 158 (291)
T ss_pred HHEEEcCCCcEEEeccccccccCCCCC-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~-- 267 (879)
......+++.|+|||.+.+. .++.++|||||||+||||++
T Consensus 159 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~ 201 (291)
T cd07870 159 -------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQ 201 (291)
T ss_pred -------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 00113568899999998764 47899999999999999999
Q ss_pred -CCCCChhhHhHHhhhcc---------------------c----CCCchh------hccChhhHHHHHHhcCCCCCCCCC
Q 002801 268 -PFSTGEEKTRTMSSLRH---------------------R----VLPPQL------LLKFPKEASFCLWLLHPEPSGRPK 315 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~---------------------~----~~~~~~------~~~~~~~~~li~~~L~~dP~~Rpt 315 (879)
||............... . ..+... ....+.+.+++.+||..||.+|||
T Consensus 202 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t 281 (291)
T cd07870 202 PAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRIS 281 (291)
T ss_pred CCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcC
Confidence 77544332221111100 0 000000 112456789999999999999999
Q ss_pred HHHHhhcccc
Q 002801 316 MGELLQSEFL 325 (879)
Q Consensus 316 ~~evl~hp~~ 325 (879)
+.|++.||||
T Consensus 282 ~~~~l~h~~~ 291 (291)
T cd07870 282 AQDALLHPYF 291 (291)
T ss_pred HHHHhcCCCC
Confidence 9999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=251.32 Aligned_cols=197 Identities=12% Similarity=0.086 Sum_probs=151.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..+. .+. ....|++|||+.+++|.+++... ...+++..++.++.||+.||.|||+.||+|||||
T Consensus 54 ~l~~l~~~~i~~~~~-~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~ 129 (260)
T cd05070 54 IMKKLRHDKLVQLYA-VVS---EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLR 129 (260)
T ss_pred HHHhcCCCceEEEEe-EEC---CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence 344567777777665 332 23579999999999999999543 3468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.........
T Consensus 130 p~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 158 (260)
T cd05070 130 SANILVGDGLVCKIADFGLARLIEDNEYT--------------------------------------------------- 158 (260)
T ss_pred cceEEEeCCceEEeCCceeeeeccCcccc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g 200 (260)
T cd05070 159 --------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred --------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcC
Confidence 0011234667999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++.....+..+.+|+.+||.++|.+|||+.++.+
T Consensus 201 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 201 RVPYPGMN-NREVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred CCCCCCCC-HHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 564433 33333444444344444556778999999999999999999998863
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.6e-27 Score=250.84 Aligned_cols=198 Identities=14% Similarity=0.106 Sum_probs=151.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..+. .+.. ....|++|||+.|++|.+++... ...+++..+..++.||+.||.|||++||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 130 (261)
T cd05068 54 IMKKLRHPKLIQLYA-VCTL--EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLA 130 (261)
T ss_pred HHHHCCCCCccceeE-EEec--CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 344556888877666 4433 44689999999999999999553 2468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++........
T Consensus 131 p~Nil~~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 159 (261)
T cd05068 131 ARNVLVGENNICKVADFGLARVIKEDIYE--------------------------------------------------- 159 (261)
T ss_pred cceEEEcCCCCEEECCcceEEEccCCccc---------------------------------------------------
Confidence 99999999999999999998764211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g 201 (261)
T cd05068 160 --------------------------------------AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred --------------------------------------ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcC
Confidence 0000122456999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.....+..+.+++.+||..+|.+||++.++++
T Consensus 202 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 202 RMPYPGMTN-AEVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred CCCCCCCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 6644332 2333333333333344456788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-27 Score=262.34 Aligned_cols=212 Identities=18% Similarity=0.181 Sum_probs=156.8
Q ss_pred eeccc-ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+... +|++++..++ ++..+....+|+||||+. ++|.++++.. .+++..++.++.||+.||.|||+.||+|||||
T Consensus 59 ~l~~l~~h~ni~~~~~-~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~ 134 (337)
T cd07852 59 FLQELGDHPNIVKLLN-VIKAENDKDIYLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLK 134 (337)
T ss_pred HHHHhcCCCCccceee-eeccCCCceEEEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 44455 8888888776 554444556899999996 5999998654 68999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++.........+
T Consensus 135 p~nill~~~~~~kl~d~g~~~~~~~~~~~~~------------------------------------------------- 165 (337)
T cd07852 135 PSNILLNSDCRVKLADFGLARSLSELEENPE------------------------------------------------- 165 (337)
T ss_pred HHHEEEcCCCcEEEeeccchhcccccccccc-------------------------------------------------
Confidence 9999999999999999999876421100000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~- 267 (879)
........||.+|+|||.+.+ ..++.++|||||||++|||++
T Consensus 166 ------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg 209 (337)
T cd07852 166 ------------------------------------NPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLG 209 (337)
T ss_pred ------------------------------------CcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhC
Confidence 000123478999999998865 448899999999999999999
Q ss_pred --CCCCChhhHhHHhh--------------------------hccc---CCCchhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 268 --PFSTGEEKTRTMSS--------------------------LRHR---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 268 --pf~~~~~~~~~~~~--------------------------~~~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
||............ +... .........+..+.++|.+||+.+|++|||+
T Consensus 210 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~ 289 (337)
T cd07852 210 KPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTA 289 (337)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCH
Confidence 66433221111000 0000 0011122346778899999999999999999
Q ss_pred HHHhhcccccCCcCc
Q 002801 317 GELLQSEFLNEPRDS 331 (879)
Q Consensus 317 ~evl~hp~~~~~~~~ 331 (879)
.++++||||+....+
T Consensus 290 ~~il~~~~~~~~~~~ 304 (337)
T cd07852 290 EEALEHPYVAQFHNP 304 (337)
T ss_pred HHHhhChhhhhhccC
Confidence 999999999875444
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-27 Score=250.58 Aligned_cols=197 Identities=13% Similarity=0.079 Sum_probs=151.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+. ....|++|||+.+++|.+++.+. ...+++..++.++.|++.||+|||+.||+|||||
T Consensus 54 ~l~~l~~~~i~~~~~-~~~---~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~ 129 (262)
T cd05071 54 VMKKLRHEKLVQLYA-VVS---EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 129 (262)
T ss_pred HHHhCCCCCcceEEE-EEC---CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccC
Confidence 344556888877665 332 23579999999999999999643 3457899999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+||+|||.++........
T Consensus 130 p~Nill~~~~~~~L~dfg~~~~~~~~~~~--------------------------------------------------- 158 (262)
T cd05071 130 AANILVGENLVCKVADFGLARLIEDNEYT--------------------------------------------------- 158 (262)
T ss_pred cccEEEcCCCcEEeccCCceeeccccccc---------------------------------------------------
Confidence 99999999999999999998654211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||++.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g 200 (262)
T cd05071 159 --------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG 200 (262)
T ss_pred --------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCC
Confidence 0001245678999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+......+.....+..+.+++.+||+++|++||++.++++
T Consensus 201 ~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 201 RVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred CCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 66544332 233333333233334456678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-27 Score=256.44 Aligned_cols=204 Identities=17% Similarity=0.201 Sum_probs=158.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..+. .+.. ....|+++||++|++|.+++......+++.++..++.||+.||.|||+.||+|+||||
T Consensus 68 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p 144 (286)
T cd06614 68 IMKDCKHPNIVDYYD-SYLV--GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKS 144 (286)
T ss_pred HHHHCCCCCeeEEEE-EEEE--CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCh
Confidence 445567888877666 4433 3568999999999999999966544799999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 145 ~ni~i~~~~~~~l~d~~~~~~~~~~~~----------------------------------------------------- 171 (286)
T cd06614 145 DNILLSKDGSVKLADFGFAAQLTKEKS----------------------------------------------------- 171 (286)
T ss_pred hhEEEcCCCCEEECccchhhhhccchh-----------------------------------------------------
Confidence 999999999999999998754311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 172 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~ 214 (286)
T cd06614 172 -------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEP 214 (286)
T ss_pred -------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCC
Confidence 0012357888999999988889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||......... ..+.....++ .....+..+.++|.+||..+|.+||++.++++|+||...
T Consensus 215 p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 215 PYLREPPLRAL-FLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred CCCCCCHHHHH-HHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 66544332222 2222222221 122256778999999999999999999999999999873
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=255.98 Aligned_cols=201 Identities=17% Similarity=0.127 Sum_probs=155.4
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
.+...+|++++..++ .+.+. ..+|++|||+++++|.+++.+. +.+++..++.++.|++.||.|||+ .||+|||||
T Consensus 56 ~l~~l~h~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~ 131 (284)
T cd06620 56 IMHECRSPYIVSFYG-AFLNE--NNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIK 131 (284)
T ss_pred HHHHcCCCCcceEee-eEecC--CEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCC
Confidence 345567888887776 44333 5689999999999999998654 468999999999999999999997 699999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++......
T Consensus 132 p~nil~~~~~~~~l~d~gl~~~~~~~------------------------------------------------------ 157 (284)
T cd06620 132 PSNILVNSRGQIKLCDFGVSGELINS------------------------------------------------------ 157 (284)
T ss_pred HHHEEECCCCcEEEccCCcccchhhh------------------------------------------------------
Confidence 99999999999999999998542100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 158 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~ 199 (284)
T cd06620 158 --------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGK 199 (284)
T ss_pred --------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCC
Confidence 0011367889999999988889999999999999999998
Q ss_pred -CCCCChhh----------HhHHhhhcccCCCchh-hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 268 -PFSTGEEK----------TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 -pf~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
||...... ......+.....+... ...+..+.+|+.+||.+||.+|||+.|+++|+||..
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 200 FPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 77543321 0111111111112111 125567889999999999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=256.37 Aligned_cols=192 Identities=14% Similarity=0.126 Sum_probs=147.3
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
+|++++..++ .+.+ ...+|++|||+++++|.+++.+.. ..+++..++.++.||+.||+|||+
T Consensus 66 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~ 142 (303)
T cd05088 66 HHPNIINLLG-ACEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 142 (303)
T ss_pred CCCCcceEEE-EECC--CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh
Confidence 6778777666 4443 346899999999999999995321 257899999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.+|++|||+++..... .
T Consensus 143 ~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--~------------------------------------------ 178 (303)
T cd05088 143 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--V------------------------------------------ 178 (303)
T ss_pred CCccccccchheEEecCCCcEEeCccccCcccchh--h------------------------------------------
Confidence 99999999999999999999999999998532100 0
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||.+.+..++.++|||||||
T Consensus 179 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 211 (303)
T cd05088 179 -----------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 211 (303)
T ss_pred -----------------------------------------------hcccCCCcccccCHHHHhccCCcccccchhhhh
Confidence 000112356799999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+||||++ ||...... .....+.....++.....++.+.+|+.+||..+|++||++.+++++
T Consensus 212 il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 212 LLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred HHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999985 66443322 2222233332233334456788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=5e-27 Score=255.41 Aligned_cols=195 Identities=14% Similarity=0.141 Sum_probs=150.7
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCccee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 114 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIl 114 (879)
+|++++..++ .+.+ ...+|++|||+.+++|.+++.... ..+++.+++.|+.||+.||.|||++||+|+||||+|||
T Consensus 97 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil 173 (302)
T cd05055 97 NHENIVNLLG-ACTI--GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVL 173 (302)
T ss_pred CCCCcceEEE-EEec--CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEE
Confidence 6888887766 4433 346899999999999999995432 34899999999999999999999999999999999999
Q ss_pred eccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 115 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 115 l~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
++.++.++++|||+++........
T Consensus 174 ~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------------------------------- 197 (302)
T cd05055 174 LTHGKIVKICDFGLARDIMNDSNY-------------------------------------------------------- 197 (302)
T ss_pred EcCCCeEEECCCcccccccCCCce--------------------------------------------------------
Confidence 999999999999998653211000
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFS 270 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~ 270 (879)
.......++..|+|||.+.+..++.++|||||||++|||++ ||.
T Consensus 198 --------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~ 245 (302)
T cd05055 198 --------------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYP 245 (302)
T ss_pred --------------------------------eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcC
Confidence 00011245678999999998889999999999999999986 665
Q ss_pred CChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
...........+.....++.....++.+.+++.+||.++|++||++.++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 246 GMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred CCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 544433333333333333333345678899999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.7e-27 Score=255.33 Aligned_cols=195 Identities=16% Similarity=0.145 Sum_probs=150.1
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ .+.+ ....|++|||+.+++|.++|.+. ...+++.+++.++.||+.||.|||+
T Consensus 79 ~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~ 155 (304)
T cd05101 79 KHKNIINLLG-ACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS 155 (304)
T ss_pred cCCCchheeE-EEec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH
Confidence 6777777666 4433 34679999999999999999542 1247888999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+||+++.++.+|++|||+++.........
T Consensus 156 ~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~----------------------------------------- 194 (304)
T cd05101 156 QKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK----------------------------------------- 194 (304)
T ss_pred CCeeecccccceEEEcCCCcEEECCCccceecccccccc-----------------------------------------
Confidence 999999999999999999999999999987642210000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||++.+..++.++|||||||
T Consensus 195 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 227 (304)
T cd05101 195 -----------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 227 (304)
T ss_pred -----------------------------------------------cccCCCCCceeeCchhhccCCCCchhhHHHHHH
Confidence 001124467799999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+||||++ ||.. .........+............+..+.+|+.+||..+|.+||++.++++.
T Consensus 228 ~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 228 LMWEIFTLGGSPYPG-IPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED 292 (304)
T ss_pred HHHHHHcCCCCCccc-CCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence 9999987 5533 23333333444433333344567789999999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=254.73 Aligned_cols=203 Identities=20% Similarity=0.134 Sum_probs=150.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++........|++|||+++++|.+++.+....+++..++.++.||+.||+|||++||+||||||
T Consensus 58 ~l~~l~h~~iv~~~~-~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp 136 (284)
T cd05081 58 ILKSLQHDNIVKYKG-VCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLAT 136 (284)
T ss_pred HHHhCCCCCeeEEEE-EEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCH
Confidence 355567888777655 5544445568999999999999999966555789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+||+|||+++..........
T Consensus 137 ~nili~~~~~~~l~dfg~~~~~~~~~~~~~-------------------------------------------------- 166 (284)
T cd05081 137 RNILVESENRVKIGDFGLTKVLPQDKEYYK-------------------------------------------------- 166 (284)
T ss_pred hhEEECCCCeEEECCCcccccccCCCccee--------------------------------------------------
Confidence 999999999999999999876421100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 167 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~ 209 (284)
T cd05081 167 -------------------------------------VREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSD 209 (284)
T ss_pred -------------------------------------ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCC
Confidence 0000123456999999988889999999999999999998
Q ss_pred CCCCChhh---------------HhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|+...... ......+.....++.....+..+.+|+.+||..+|++|||+.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 210 KSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred cCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 22111100 0001111222223333455678899999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=253.06 Aligned_cols=199 Identities=13% Similarity=0.066 Sum_probs=152.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------CCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ ++.+ ....|++|||+.+++|.+++... ...+++..++.++.||+.||.|||+.
T Consensus 62 ~l~~~~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 138 (277)
T cd05032 62 VMKEFNCHHVVRLLG-VVST--GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK 138 (277)
T ss_pred HHHhCCCCceeEEEE-EEcC--CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 345567888877666 4433 35689999999999999998432 12468889999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.+|++|||+++........
T Consensus 139 ~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------- 175 (277)
T cd05032 139 KFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY------------------------------------------- 175 (277)
T ss_pred CccccccChheEEEcCCCCEEECCcccchhhccCccc-------------------------------------------
Confidence 9999999999999999999999999998653211000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 176 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 210 (277)
T cd05032 176 ---------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210 (277)
T ss_pred ---------------------------------------------ccCCCCCccccccCHHHHhcCCCCcccchHHHHHH
Confidence 00011256778999999988889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||++ ||... ........+.....++.+...+..+.+++.+||..+|++|||+.++++
T Consensus 211 l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 211 LWEMATLAEQPYQGL-SNEEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHhhccCCCCCccC-CHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999996 66433 333334444443334444455778899999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-27 Score=249.45 Aligned_cols=193 Identities=17% Similarity=0.115 Sum_probs=150.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ...|++|||+.+++|.+++... ...+++..++.++.|++.||.|||+.|++|||||
T Consensus 52 ~l~~~~~~~i~~~~~-~~~~---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~ 127 (254)
T cd05083 52 VMTKLHHKNLVRLLG-VILH---NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLA 127 (254)
T ss_pred HHHhCCCCCcCeEEE-EEcC---CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence 455677888888776 4432 3479999999999999999543 3468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||+++..... .
T Consensus 128 p~nili~~~~~~kl~Dfg~~~~~~~~-~---------------------------------------------------- 154 (254)
T cd05083 128 ARNILVSEDGVAKVSDFGLARVGSMG-V---------------------------------------------------- 154 (254)
T ss_pred cceEEEcCCCcEEECCCccceecccc-C----------------------------------------------------
Confidence 99999999999999999998542100 0
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....+..|+|||.+.+..++.++|||||||++|||++
T Consensus 155 ----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g 194 (254)
T cd05083 155 ----------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYG 194 (254)
T ss_pred ----------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCC
Confidence 00122456999999988889999999999999999985
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||....... ....+.....++.....++.+.+++.+||..+|.+||++.++++
T Consensus 195 ~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 195 RAPYPKMSLKE-VKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CCCCccCCHHH-HHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 665443332 22233333333333456678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.2e-27 Score=256.77 Aligned_cols=194 Identities=16% Similarity=0.141 Sum_probs=149.7
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ +|.+ ....|++|||+.+++|.+++.... ..+++.+++.++.||+.||+|||+
T Consensus 82 ~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 158 (307)
T cd05098 82 KHKNIINLLG-ACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS 158 (307)
T ss_pred CCCCEeeEEE-EEec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5777777666 5543 346899999999999999995421 247889999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+||+++.++.+|++|||.++.........
T Consensus 159 ~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~----------------------------------------- 197 (307)
T cd05098 159 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK----------------------------------------- 197 (307)
T ss_pred CCcccccccHHheEEcCCCcEEECCCcccccccccchhh-----------------------------------------
Confidence 999999999999999999999999999986532110000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||.+.+..++.++|||||||
T Consensus 198 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~ 230 (307)
T cd05098 198 -----------------------------------------------KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 230 (307)
T ss_pred -----------------------------------------------ccccCCCccceeChHHhccCCCCcHHHHHHHHH
Confidence 001113356799999999888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++|||++ ||.. .........+.....++.+...+..+.+|+.+||..+|.+||++.++++
T Consensus 231 ~l~el~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 231 LLWEIFTLGGSPYPG-VPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred HHHHHHcCCCCCCCc-CCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 9999986 5543 3333344444444444444456778899999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.2e-27 Score=262.91 Aligned_cols=205 Identities=16% Similarity=0.231 Sum_probs=154.7
Q ss_pred eeecccccccCCCCCCcccccccc----cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAA----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
..+...+|++++..++ ++..+.. ...|++|||+ |++|.+++.. ..+++..++.++.||+.||+|||++||+|
T Consensus 66 ~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H 141 (343)
T cd07880 66 RLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIH 141 (343)
T ss_pred HHHHhcCCCCccceee-eecCCccccccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 3455667888877666 4433221 2458999998 7899998854 46899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++.++.++++|||++......
T Consensus 142 ~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-------------------------------------------------- 171 (343)
T cd07880 142 RDLKPGNLAVNEDCELKILDFGLARQTDSE-------------------------------------------------- 171 (343)
T ss_pred CCCCHHHEEEcCCCCEEEeecccccccccC--------------------------------------------------
Confidence 999999999999999999999998653111
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 264 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~e 264 (879)
.....++++|+|||.+.+ ..++.++|||||||++|+
T Consensus 172 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~ 208 (343)
T cd07880 172 -------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAE 208 (343)
T ss_pred -------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 011356889999999876 358999999999999999
Q ss_pred hhc---CCCCChhhHhHHhhhccc-------------------------CC----CchhhccChhhHHHHHHhcCCCCCC
Q 002801 265 LFC---PFSTGEEKTRTMSSLRHR-------------------------VL----PPQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 265 ll~---pf~~~~~~~~~~~~~~~~-------------------------~~----~~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
|++ ||............+... .. .......++.+.++|.+||+.||.+
T Consensus 209 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 288 (343)
T cd07880 209 MLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAES 288 (343)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhh
Confidence 999 775443322222111100 00 0111244567889999999999999
Q ss_pred CCCHHHHhhcccccCCcCc
Q 002801 313 RPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 313 Rpt~~evl~hp~~~~~~~~ 331 (879)
|||+.+++.||||+.....
T Consensus 289 R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 289 RITAAEALAHPYFEEFHDP 307 (343)
T ss_pred CCCHHHHhcCccHhhhcCc
Confidence 9999999999999876544
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-27 Score=252.89 Aligned_cols=205 Identities=15% Similarity=0.195 Sum_probs=155.7
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC--CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~--~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
+....|++++..++ .+. .....|++||++.|++|.+++... ...+++..++.++.||+.||.|||++||+|+|||
T Consensus 53 l~~l~~~~i~~~~~-~~~--~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~ 129 (267)
T cd06610 53 MSQCNHPNVVKYYT-SFV--VGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIK 129 (267)
T ss_pred HHhcCCCCEEEEEE-EEe--eCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 34456777766655 333 345689999999999999999543 2468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++..........
T Consensus 130 p~ni~~~~~~~~~l~df~~~~~~~~~~~~~-------------------------------------------------- 159 (267)
T cd06610 130 AGNILLGEDGSVKIADFGVSASLADGGDRT-------------------------------------------------- 159 (267)
T ss_pred HHhEEEcCCCCEEEcccchHHHhccCcccc--------------------------------------------------
Confidence 999999999999999999986642210000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~- 267 (879)
........|+..|+|||.+... .++.++|+|||||++|||++
T Consensus 160 ------------------------------------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g 203 (267)
T cd06610 160 ------------------------------------RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATG 203 (267)
T ss_pred ------------------------------------ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhC
Confidence 0000224688999999998876 68999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccC--CCch--hhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRV--LPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||............+.... .+.. ....++.+.+++.+||..||++||++.++++||||
T Consensus 204 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 204 AAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred CCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 7754443333333332211 1111 12445778899999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.8e-27 Score=249.84 Aligned_cols=201 Identities=17% Similarity=0.198 Sum_probs=157.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+.+ ...+|+++||+.+++|.+++.+. ...+++..++.++.||+.||.|||+.||+|+|||
T Consensus 52 ~l~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~ 128 (257)
T cd08225 52 LLAKMKHPNIVTFFA-SFQE--NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIK 128 (257)
T ss_pred HHHhCCCCChhhhhh-eecc--CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence 455667888888776 4443 34689999999999999999543 2357999999999999999999999999999999
Q ss_pred CcceeeccCC-CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 110 PSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 110 P~NIll~~~~-~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
|+||+++.++ .+|++|||.+........
T Consensus 129 ~~nil~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 157 (257)
T cd08225 129 SQNIFLSKNGMVAKLGDFGIARQLNDSME--------------------------------------------------- 157 (257)
T ss_pred HHHEEEcCCCCeEEecccccchhccCCcc---------------------------------------------------
Confidence 9999998875 469999998865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......|++.|+|||.+.+..++.++|+|||||++|||++
T Consensus 158 ---------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g 198 (257)
T cd08225 158 ---------------------------------------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTL 198 (257)
T ss_pred ---------------------------------------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhC
Confidence 0011357888999999988889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||........... ......++.....+..+.+++.+||..+|++|||+.++++||||
T Consensus 199 ~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 199 KHPFEGNNLHQLVLK-ICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred CCCCCCccHHHHHHH-HhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 7754443333333 33333444444556789999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.3e-27 Score=246.74 Aligned_cols=198 Identities=15% Similarity=0.136 Sum_probs=153.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ .|.++ ...|++|||+++++|.+++......+++..++.++.||+.||.|||++|++|+||||
T Consensus 45 ~l~~l~h~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p 121 (250)
T cd05085 45 ILKQYDHPNIVKLIG-VCTQR--QPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAA 121 (250)
T ss_pred HHHhCCCCCcCeEEE-EEecC--CccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCh
Confidence 344567888877766 55443 468999999999999999966556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++.........
T Consensus 122 ~nili~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------------- 149 (250)
T cd05085 122 RNCLVGENNVLKISDFGMSRQEDDGIYS---------------------------------------------------- 149 (250)
T ss_pred heEEEcCCCeEEECCCccceeccccccc----------------------------------------------------
Confidence 9999999999999999998542111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||++.+..++.++|||||||++|||++
T Consensus 150 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~ 192 (250)
T cd05085 150 -------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGV 192 (250)
T ss_pred -------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCC
Confidence 0001123556999999988889999999999999999997
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+............+..+.+++.+||..+|++||++.++++
T Consensus 193 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 193 CPYPGMTNQ-QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred CCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 77544332 333333333333334456688999999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=248.71 Aligned_cols=198 Identities=17% Similarity=0.225 Sum_probs=153.6
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|+++||++|++|.+++......+++.++..++.|++.||.|||++|++|+||+|+
T Consensus 51 l~~l~~~~i~~~~~-~~~~--~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ 127 (253)
T cd05122 51 LKKCKHPNIVKYYG-SYLK--KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAA 127 (253)
T ss_pred HHhCCCCCEeEEEE-EEec--CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHH
Confidence 34445777766555 3333 25689999999999999999665467899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++|+|||.+........
T Consensus 128 ni~i~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------------ 153 (253)
T cd05122 128 NILLTSDGEVKLIDFGLSAQLSDTKA------------------------------------------------------ 153 (253)
T ss_pred HEEEccCCeEEEeecccccccccccc------------------------------------------------------
Confidence 99999999999999999865421100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....|+..|+|||.+.+..++.++|||||||++|+|++ |
T Consensus 154 -------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p 196 (253)
T cd05122 154 -------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPP 196 (253)
T ss_pred -------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCC
Confidence 012367888999999988889999999999999999999 6
Q ss_pred CCCChhhHhHHhhhcccCCCchhhc--cChhhHHHHHHhcCCCCCCCCCHHHHhhccc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEF 324 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~ 324 (879)
|.............. ...+..... .+..+.+++.+||..||++|||+.++++|||
T Consensus 197 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 197 YSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred CCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 654432222222221 212221112 2577899999999999999999999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.8e-27 Score=259.07 Aligned_cols=197 Identities=18% Similarity=0.191 Sum_probs=148.0
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------------------------------
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------------------------------- 76 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------------------------------- 76 (879)
+|++++..++ .|.. .....|++||||++|+|.+++....
T Consensus 69 ~h~niv~~~~-~~~~-~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (343)
T cd05103 69 HHLNVVNLLG-ACTK-PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQS 146 (343)
T ss_pred CCccHhhhcc-eeec-CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccc
Confidence 5677777666 4443 2345799999999999999984321
Q ss_pred ---------------------------CCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccc
Q 002801 77 ---------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 129 (879)
Q Consensus 77 ---------------------------~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~ 129 (879)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.+|++|||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~ 226 (343)
T cd05103 147 SASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLA 226 (343)
T ss_pred cccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccc
Confidence 23677888999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecccccccccc
Q 002801 130 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 209 (879)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (879)
+........
T Consensus 227 ~~~~~~~~~----------------------------------------------------------------------- 235 (343)
T cd05103 227 RDIYKDPDY----------------------------------------------------------------------- 235 (343)
T ss_pred cccccCcch-----------------------------------------------------------------------
Confidence 653111000
Q ss_pred ccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhccc
Q 002801 210 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHR 285 (879)
Q Consensus 210 d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~ 285 (879)
.......++..|+|||.+.+..++.++|||||||++|||++ ||............+...
T Consensus 236 -----------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 298 (343)
T cd05103 236 -----------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG 298 (343)
T ss_pred -----------------hhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhcc
Confidence 00011234667999999988889999999999999999985 665433333333333333
Q ss_pred CCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 286 VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 286 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
..++.+...++.+.+++.+||+.+|.+||++.++++|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 299 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 3333333455788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.2e-25 Score=242.35 Aligned_cols=270 Identities=17% Similarity=0.311 Sum_probs=221.8
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEE
Q 002801 574 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVL 653 (879)
Q Consensus 574 l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~ 653 (879)
++|+. ...+|+|.. ..|++|+..++. ...+..+. ...|+++.|++. +.+|+.|..+|.|.|||..+.+.+
T Consensus 183 ldWss-~n~laValg-~~vylW~~~s~~------v~~l~~~~-~~~vtSv~ws~~-G~~LavG~~~g~v~iwD~~~~k~~ 252 (484)
T KOG0305|consen 183 LDWSS-ANVLAVALG-QSVYLWSASSGS------VTELCSFG-EELVTSVKWSPD-GSHLAVGTSDGTVQIWDVKEQKKT 252 (484)
T ss_pred hhccc-CCeEEEEec-ceEEEEecCCCc------eEEeEecC-CCceEEEEECCC-CCEEEEeecCCeEEEEehhhcccc
Confidence 44553 334555443 489999977632 11223333 688999999995 999999999999999999999999
Q ss_pred EEecc-CCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEE-Ee-cCCceEEEEeeCCCCCEEEEEeCCCeEEEE
Q 002801 654 TEMRE-HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGT-IK-TKANVCCVQFPLDSGRSLAFGSADHRIYYY 730 (879)
Q Consensus 654 ~~~~~-h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~-~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iw 730 (879)
..+.+ |..+|-+++|+ ...+.+|+.|+.|..+|++..+.... +. |...||.++|+++ ++++|+|+.|+.+.||
T Consensus 253 ~~~~~~h~~rvg~laW~---~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d-~~~lASGgnDN~~~Iw 328 (484)
T KOG0305|consen 253 RTLRGSHASRVGSLAWN---SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPD-GNQLASGGNDNVVFIW 328 (484)
T ss_pred ccccCCcCceeEEEecc---CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCC-CCeeccCCCccceEec
Confidence 99988 99999999997 47899999999999999998876655 54 4567999999999 8999999999999999
Q ss_pred EcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEE--EcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCC
Q 002801 731 DLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSA--STDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG 806 (879)
Q Consensus 731 Dl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~--s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~ 806 (879)
|..... |...+..|..+|..++|+ ...+||+| +.|+.|++||+.++ ..+.... -.+.|..|.|++..+
T Consensus 329 d~~~~~-p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g------~~i~~vd-tgsQVcsL~Wsk~~k 400 (484)
T KOG0305|consen 329 DGLSPE-PKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTG------ARIDSVD-TGSQVCSLIWSKKYK 400 (484)
T ss_pred cCCCcc-ccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCC------cEecccc-cCCceeeEEEcCCCC
Confidence 996665 688899999999999998 88899986 47999999999987 4555543 356799999999986
Q ss_pred EEEEE--eCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 807 YVATG--SETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 807 ~lasg--s~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
-|+++ -.++.|.||...+.+++..+ .+|...|..++|+|||. .+++|+.|.++++|+++
T Consensus 401 Ei~sthG~s~n~i~lw~~ps~~~~~~l-------------~gH~~RVl~la~SPdg~-~i~t~a~DETlrfw~~f 461 (484)
T KOG0305|consen 401 ELLSTHGYSENQITLWKYPSMKLVAEL-------------LGHTSRVLYLALSPDGE-TIVTGAADETLRFWNLF 461 (484)
T ss_pred EEEEecCCCCCcEEEEeccccceeeee-------------cCCcceeEEEEECCCCC-EEEEecccCcEEecccc
Confidence 44443 34678999999875554433 57899999999999999 99999999999999874
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.3e-27 Score=258.89 Aligned_cols=209 Identities=15% Similarity=0.153 Sum_probs=151.2
Q ss_pred ccccCCCCCCcccc-c-ccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcce
Q 002801 36 DHLRNQGGLSGVCE-N-EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 36 ~~~~~~~~~~~~~~-~-~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NI 113 (879)
+|++++..+. .+. . ......|++|+|+. ++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+||
T Consensus 60 ~h~~iv~~~~-~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Ni 136 (332)
T cd07857 60 GHKNITCLYD-MDIVFPGNFNELYLYEELME-ADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNL 136 (332)
T ss_pred CCCChheeee-eeeeccccCCcEEEEEeccc-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHe
Confidence 5777777665 221 1 22245688888885 6899999554 5789999999999999999999999999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
|++.++.+||+|||+++.........
T Consensus 137 li~~~~~~kl~Dfg~a~~~~~~~~~~------------------------------------------------------ 162 (332)
T cd07857 137 LVNADCELKICDFGLARGFSENPGEN------------------------------------------------------ 162 (332)
T ss_pred EEcCCCCEEeCcCCCceecccccccc------------------------------------------------------
Confidence 99999999999999997642110000
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc---CC
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PF 269 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~---pf 269 (879)
........||..|+|||.+.+ ..++.++|||||||++|+|++ ||
T Consensus 163 --------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf 210 (332)
T cd07857 163 --------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVF 210 (332)
T ss_pred --------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCC
Confidence 000122478999999998866 458999999999999999998 55
Q ss_pred CCChhhHhHHhhh--------------------------cc---cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 270 STGEEKTRTMSSL--------------------------RH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 270 ~~~~~~~~~~~~~--------------------------~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
............+ .. ..++......++.+.+|+.+||+.||.+|||+.+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 211 KGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 4332111110000 00 000111123456788999999999999999999999
Q ss_pred hcccccCCcCchH
Q 002801 321 QSEFLNEPRDSME 333 (879)
Q Consensus 321 ~hp~~~~~~~~~~ 333 (879)
.||||.....+..
T Consensus 291 ~~~~~~~~~~~~~ 303 (332)
T cd07857 291 EHPYLAIWHDPDD 303 (332)
T ss_pred cChhhhhhcCccc
Confidence 9999986654433
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-27 Score=249.95 Aligned_cols=197 Identities=18% Similarity=0.127 Sum_probs=154.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ +|.+ ...|++|||+.+++|.+++.+....+++..++.++.||+.||+|||+.|++|+||||
T Consensus 60 ~l~~~~h~~i~~~~~-~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p 135 (270)
T cd05056 60 IMRQFDHPHIVKLIG-VITE---NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAA 135 (270)
T ss_pred HHHhCCCCchhceeE-EEcC---CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCh
Confidence 445567888888766 6654 347899999999999999976555789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++..+.+|++|||+++........
T Consensus 136 ~nili~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------------- 163 (270)
T cd05056 136 RNVLVSSPDCVKLGDFGLSRYLEDESYY---------------------------------------------------- 163 (270)
T ss_pred heEEEecCCCeEEccCceeeecccccce----------------------------------------------------
Confidence 9999999999999999998653111000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
..+...++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~ 206 (270)
T cd05056 164 -------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGV 206 (270)
T ss_pred -------------------------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCC
Confidence 0011133567999999988889999999999999999885
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||......... ..+.....++.+...++.+.+++.+||..+|.+|||+.+++.
T Consensus 207 ~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 207 KPFQGVKNNDVI-GRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred CCCCCCCHHHHH-HHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 77554443333 333333333444566788999999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.5e-25 Score=217.36 Aligned_cols=272 Identities=19% Similarity=0.293 Sum_probs=224.0
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd 646 (879)
..+.|+++.|+|.+..|+++++||.+++|++... .....+.|..++.+++|.+ ...+++|+-||.|+.+|
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~--------~l~~~~~~~~plL~c~F~d--~~~~~~G~~dg~vr~~D 81 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN--------SLKLKFKHGAPLLDCAFAD--ESTIVTGGLDGQVRRYD 81 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccch--------hhhhheecCCceeeeeccC--CceEEEeccCceEEEEE
Confidence 3578999999999999999999999999999863 2234467899999999986 68899999999999999
Q ss_pred cCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeCCCe
Q 002801 647 VSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHR 726 (879)
Q Consensus 647 ~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~ 726 (879)
+++++.. .+..|..+|.||.+++ ....+++||.|++|++||.+....+.++.....|.|+... ++.|++|..|..
T Consensus 82 ln~~~~~-~igth~~~i~ci~~~~-~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~---g~~LvVg~~~r~ 156 (323)
T KOG1036|consen 82 LNTGNED-QIGTHDEGIRCIEYSY-EVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVS---GNRLVVGTSDRK 156 (323)
T ss_pred ecCCcce-eeccCCCceEEEEeec-cCCeEEEcccCccEEEEeccccccccccccCceEEEEecc---CCEEEEeecCce
Confidence 9988754 4557999999999998 6789999999999999999998888888887889999886 678999999999
Q ss_pred EEEEEcCCCceeeEEEc-cCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCC---------c
Q 002801 727 IYYYDLRNSKIPLCTLI-GHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN---------V 795 (879)
Q Consensus 727 I~iwDl~~~~~~~~~~~-~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~---------~ 795 (879)
|.+||+|+...+..... .-+-.+.+|++. +++-++.+|.||.|.+=.+...... ......|+.|.. +
T Consensus 157 v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~--~skkyaFkCHr~~~~~~~~~yP 234 (323)
T KOG1036|consen 157 VLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEA--QSKKYAFKCHRLSEKDTEIIYP 234 (323)
T ss_pred EEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHH--hhhceeEEeeecccCCceEEEE
Confidence 99999999886553222 334568888887 7888999999999887655543110 133456667743 7
Q ss_pred EEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeC
Q 002801 796 KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANS 869 (879)
Q Consensus 796 v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~ 869 (879)
|++++|+|--+.|||||.||.|.+||....+.+..+.- -...|.+++|+.+|. .||.|++
T Consensus 235 VNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~-------------~~~SI~slsfs~dG~-~LAia~s 294 (323)
T KOG1036|consen 235 VNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAK-------------YETSISSLSFSMDGS-LLAIASS 294 (323)
T ss_pred eceeEeccccceEEecCCCceEEEccCcchhhhhhccC-------------CCCceEEEEeccCCC-eEEEEec
Confidence 89999999999999999999999999998887776531 133599999999999 9998875
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=247.76 Aligned_cols=198 Identities=17% Similarity=0.142 Sum_probs=152.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++. ....+++|||+.+++|.++|.+. ..+++..++.++.|++.||+|||++||+|+||||
T Consensus 49 ~l~~l~h~~iv~~~~-~~~---~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p 123 (257)
T cd05060 49 VMAQLDHPCIVRLIG-VCK---GEPLMLVMELAPLGPLLKYLKKR-REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAA 123 (257)
T ss_pred HHHhcCCCCeeeEEE-EEc---CCceEEEEEeCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCccc
Confidence 344567888877665 443 33579999999999999999655 3789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.+|++|||+++........ .
T Consensus 124 ~nili~~~~~~kl~df~~~~~~~~~~~~--~------------------------------------------------- 152 (257)
T cd05060 124 RNVLLVNRHQAKISDFGMSRALGAGSDY--Y------------------------------------------------- 152 (257)
T ss_pred ceEEEcCCCcEEeccccccceeecCCcc--c-------------------------------------------------
Confidence 9999999999999999998654211000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 153 ------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~ 196 (257)
T cd05060 153 ------------------------------------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGA 196 (257)
T ss_pred ------------------------------------ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCC
Confidence 00001123567999999988889999999999999999996
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.+...++.+.+++.+||..+|.+||++.++++
T Consensus 197 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 197 KPYGEMKG-AEVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred CCcccCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 6544332 3333334333333444556678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-27 Score=255.07 Aligned_cols=207 Identities=16% Similarity=0.263 Sum_probs=160.0
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+...+|++++..+. .+. .....|++|||+++++|.+++.. ..+++..++.++.||+.||+|||++||+|+||
T Consensus 68 ~~~l~~l~h~~iv~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl 142 (292)
T cd06657 68 VVIMRDYQHENVVEMYN-SYL--VGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDI 142 (292)
T ss_pred HHHHHhcCCcchhheee-EEE--eCCEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCC
Confidence 33455667888877776 333 24468999999999999998854 35799999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||++........
T Consensus 143 ~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 171 (292)
T cd06657 143 KSDSILLTHDGRVKLSDFGFCAQVSKEVP--------------------------------------------------- 171 (292)
T ss_pred CHHHEEECCCCCEEEcccccceecccccc---------------------------------------------------
Confidence 99999999999999999998754311100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......|++.|+|||.+.+..++.++|||||||++|||++
T Consensus 172 ---------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg 212 (292)
T cd06657 172 ---------------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212 (292)
T ss_pred ---------------------------------------cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhC
Confidence 0012367889999999988889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcccCC--CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~ 331 (879)
||..... ......+..... .+.....++.+.+++.+||..+|.+||++.++++||||.....+
T Consensus 213 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~ 279 (292)
T cd06657 213 EPPYFNEPP-LKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPP 279 (292)
T ss_pred CCCCCCCCH-HHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCC
Confidence 7654332 222222222211 11223456788999999999999999999999999999876543
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-27 Score=262.02 Aligned_cols=198 Identities=17% Similarity=0.156 Sum_probs=161.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.....+|+|+|.+|+ ++.++. -+|||||+|.||+|.++|++.+..++..+...++.+.+.||+|||++++|||||-.
T Consensus 214 vMr~l~H~NVVr~yG-Va~~~~--Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAA 290 (474)
T KOG0194|consen 214 VMRQLNHPNVVRFYG-VAVLEE--PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAA 290 (474)
T ss_pred HHHhCCCCCEEEEEE-EEcCCC--ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhH
Confidence 344589999999888 877643 57999999999999999988777899999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
.|+|++..+.+||+|||+++...........
T Consensus 291 RNcL~~~~~~vKISDFGLs~~~~~~~~~~~~------------------------------------------------- 321 (474)
T KOG0194|consen 291 RNCLYSKKGVVKISDFGLSRAGSQYVMKKFL------------------------------------------------- 321 (474)
T ss_pred HHheecCCCeEEeCccccccCCcceeecccc-------------------------------------------------
Confidence 9999999999999999998663211000000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.-=...|+|||.+....|++++|||||||++||+++
T Consensus 322 -----------------------------------------~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~ 360 (474)
T KOG0194|consen 322 -----------------------------------------KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGA 360 (474)
T ss_pred -----------------------------------------ccCcceecChhhhccCccccccchhheeeeEEeeeccCC
Confidence 001335999999999999999999999999999998
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.+..........+..+...+.+...+..+..++.+|+..+|++||+|.++.+
T Consensus 361 ~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 361 EPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred CCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 887666655544454655555555566677889999999999999999998865
|
|
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.1e-27 Score=253.71 Aligned_cols=201 Identities=15% Similarity=0.214 Sum_probs=150.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC--CCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+...+|++++..++ .+.+ ....|++|||+.+ +|.+++.... ..+++..++.++.||+.||+|||++||+||||
T Consensus 51 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl 126 (284)
T cd07836 51 LMKELKHENIVRLHD-VIHT--ENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDL 126 (284)
T ss_pred HHHhhcCCCEeeeee-eEee--CCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 444557788777766 4433 3467999999975 8988885432 46899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||+++.......
T Consensus 127 ~p~ni~~~~~~~~~l~d~g~~~~~~~~~~--------------------------------------------------- 155 (284)
T cd07836 127 KPQNLLINKRGELKLADFGLARAFGIPVN--------------------------------------------------- 155 (284)
T ss_pred CHHHEEECCCCcEEEeecchhhhhcCCcc---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~ 267 (879)
......++.+|+|||.+.+.. ++.++|||||||++|||++
T Consensus 156 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~ 196 (284)
T cd07836 156 ---------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMIT 196 (284)
T ss_pred ---------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 001135688999999987654 7899999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcc-------------------cCCC--------chhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 ---PFSTGEEKTRTMSSLRH-------------------RVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~-------------------~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||............... ...+ ......++.+.+++.+||+.||.+||++.
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 276 (284)
T cd07836 197 GRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAH 276 (284)
T ss_pred CCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHH
Confidence 66543322211111100 0000 01123456788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
++++||||
T Consensus 277 ~~l~~~~f 284 (284)
T cd07836 277 DALQHPWF 284 (284)
T ss_pred HHhcCCCC
Confidence 99999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=263.13 Aligned_cols=211 Identities=15% Similarity=0.146 Sum_probs=150.8
Q ss_pred ecccccccCCCCCCcccccccc------------cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhh
Q 002801 32 LTHGDHLRNQGGLSGVCENEAA------------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
+...+|++++..+. .+.+... ...|++|||+. ++|.+++.. ..+++..++.++.||+.||.|||
T Consensus 56 l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH 131 (342)
T cd07854 56 IRRLDHDNIVKVYE-VLGPSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIH 131 (342)
T ss_pred HHhcCCCcchhhHh-hhcccccccccccccccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH
Confidence 44457777776665 2222211 24689999996 599998854 35899999999999999999999
Q ss_pred hcCcccccCCCcceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 100 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 100 s~givHrDlKP~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
++||+||||||+||+++. ++.+|++|||+++.........+
T Consensus 132 ~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~-------------------------------------- 173 (342)
T cd07854 132 SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKG-------------------------------------- 173 (342)
T ss_pred hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccccc--------------------------------------
Confidence 999999999999999974 55789999999865311100000
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchh
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYR 257 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwS 257 (879)
......|+.+|+|||.+.+ ..++.++||||
T Consensus 174 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwS 204 (342)
T cd07854 174 -------------------------------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAIDMWA 204 (342)
T ss_pred -------------------------------------------------ccccccccccccCHHHHhCccccCchhhHHH
Confidence 0011257889999998755 45889999999
Q ss_pred HHHHHHHhhc---CCCCChhhHhHHhhhccc----------------------C----CC--chhhccChhhHHHHHHhc
Q 002801 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHR----------------------V----LP--PQLLLKFPKEASFCLWLL 306 (879)
Q Consensus 258 lGvil~ell~---pf~~~~~~~~~~~~~~~~----------------------~----~~--~~~~~~~~~~~~li~~~L 306 (879)
|||++|||++ ||............+... . .+ .........+.+|+.+||
T Consensus 205 lGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 284 (342)
T cd07854 205 AGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQIL 284 (342)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHh
Confidence 9999999999 775443322222111100 0 00 111234567889999999
Q ss_pred CCCCCCCCCHHHHhhcccccCCcCchH
Q 002801 307 HPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 307 ~~dP~~Rpt~~evl~hp~~~~~~~~~~ 333 (879)
..||.+|||+.+++.||||+....+..
T Consensus 285 ~~dP~~R~t~~ell~h~~~~~~~~~~~ 311 (342)
T cd07854 285 TFNPMDRLTAEEALMHPYMSCYSCPFD 311 (342)
T ss_pred CCCchhccCHHHHhCCCccccccCCcc
Confidence 999999999999999999986544433
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.9e-27 Score=247.68 Aligned_cols=205 Identities=21% Similarity=0.183 Sum_probs=160.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+......|++|||+.+++|.+++.... .+++.++..++.|++.||.|||+.|++|+||+|
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p 129 (260)
T cd06606 52 ILSSLQHPNIVRYYG-SERDEEKNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKG 129 (260)
T ss_pred HHHHcCCCCEeeEEE-EEecCCCCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence 344556888887666 444332356899999999999999996553 789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++|+|||.+.........
T Consensus 130 ~ni~i~~~~~~~l~d~~~~~~~~~~~~~---------------------------------------------------- 157 (260)
T cd06606 130 ANILVDSDGVVKLADFGCAKRLGDIETG---------------------------------------------------- 157 (260)
T ss_pred HHEEEcCCCCEEEcccccEEeccccccc----------------------------------------------------
Confidence 9999999999999999998664221000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 158 ------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~ 201 (260)
T cd06606 158 ------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKP 201 (260)
T ss_pred ------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 00012367888999999988889999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc-cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||.........+..+.. ...+......+..+.+++.+||..+|.+||++.++++||||
T Consensus 202 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 202 PWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred CCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 77555433333333332 22333334456788999999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-27 Score=249.03 Aligned_cols=197 Identities=18% Similarity=0.180 Sum_probs=155.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+....|++++..++ .+. ....+|++|||+++++|.+++.. ....+++..++.++.||+.||.|||++||+|+||||
T Consensus 52 l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p 128 (255)
T cd08219 52 LAKMKHPNIVAFKE-SFE--ADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKS 128 (255)
T ss_pred HHhCCCCCcceEEE-EEE--ECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCc
Confidence 44556777777666 332 34578999999999999999854 334689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 129 ~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 155 (255)
T cd08219 129 KNIFLTQNGKVKLGDFGSARLLTSPGA----------------------------------------------------- 155 (255)
T ss_pred ceEEECCCCcEEEcccCcceeeccccc-----------------------------------------------------
Confidence 999999999999999999865321100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|++.|+|||++.+..++.++|||||||++|+|++
T Consensus 156 -------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~ 198 (255)
T cd08219 156 -------------------------------------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKH 198 (255)
T ss_pred -------------------------------------ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccC
Confidence 0012467889999999988889999999999999999998
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||........ ...+.....++.....+..+.+|+.+||..||.+||++.+++.-
T Consensus 199 p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 199 PFQANSWKNL-ILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCCCCHHHH-HHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 7765443332 33334444444444566788999999999999999999999864
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3e-27 Score=260.74 Aligned_cols=210 Identities=19% Similarity=0.230 Sum_probs=156.6
Q ss_pred eecccccccCCCCCCccccccc---ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++..++ ++.+.. ....|++|||+. ++|.+++.+. ..+++..++.++.||+.||+|||++||+|+|
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~-~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~d 128 (330)
T cd07834 52 LLRHLRHENIIGLLD-ILRPPSPEDFNDVYIVTELME-TDLHKVIKSP-QPLTDDHIQYFLYQILRGLKYLHSANVIHRD 128 (330)
T ss_pred HHHhcCCcchhhhhh-hhcccCcccccceEEEecchh-hhHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 344556777777665 444332 236799999997 5899999655 4799999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++.++.++++|||++.........
T Consensus 129 lkp~nili~~~~~~~L~dfg~~~~~~~~~~~------------------------------------------------- 159 (330)
T cd07834 129 LKPSNILVNSNCDLKICDFGLARGVDPDEDE------------------------------------------------- 159 (330)
T ss_pred CCHHHEEEcCCCCEEEcccCceEeecccccc-------------------------------------------------
Confidence 9999999999999999999998654221000
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell 266 (879)
+.......++.+|+|||.+.+. .++.++|||||||++|+|+
T Consensus 160 --------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~ 201 (330)
T cd07834 160 --------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL 201 (330)
T ss_pred --------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHH
Confidence 0001224679999999999887 7999999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc--C----------------------------CCchhhccChhhHHHHHHhcCCCCCCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR--V----------------------------LPPQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~--~----------------------------~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
+ ||........ ...+... . ........++.+.+++.+||+.+|.+|
T Consensus 202 ~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 280 (330)
T cd07834 202 TRKPLFPGRDYIDQ-LNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKR 280 (330)
T ss_pred cCCCCcCCCCHHHH-HHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhC
Confidence 9 6644332111 1111100 0 000112245678899999999999999
Q ss_pred CCHHHHhhcccccCCcCc
Q 002801 314 PKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 314 pt~~evl~hp~~~~~~~~ 331 (879)
|+++++++||||.....+
T Consensus 281 pt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 281 ITADEALAHPYLAQLHDP 298 (330)
T ss_pred CCHHHHHhCccHHhhccc
Confidence 999999999999876544
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.3e-27 Score=261.61 Aligned_cols=204 Identities=18% Similarity=0.235 Sum_probs=152.3
Q ss_pred ecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 32 LTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+....|++++.... +...+ .....|+++||+ |++|.+++.. ..+++.+++.++.||+.||+|||+.||+|||
T Consensus 68 l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~d 143 (343)
T cd07851 68 LKHMDHENVIGLLD-VFTPASSLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRD 143 (343)
T ss_pred HHhccCCCHHHHHH-HhhccccccccccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 34456777766544 22221 123579999998 7799999965 4689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.++|+|||++......
T Consensus 144 lkp~Nill~~~~~~kL~dfg~~~~~~~~---------------------------------------------------- 171 (343)
T cd07851 144 LKPSNIAVNEDCELKILDFGLARHTDDE---------------------------------------------------- 171 (343)
T ss_pred CCHHHeEECCCCCEEEcccccccccccc----------------------------------------------------
Confidence 9999999999999999999998653111
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhh
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell 266 (879)
.....++.+|+|||.+.+. .++.++|||||||++|||+
T Consensus 172 -----------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ell 210 (343)
T cd07851 172 -----------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred -----------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHH
Confidence 0123668899999998663 5889999999999999999
Q ss_pred c---CCCCChhhHhHHhhhccc-C----------------------------CCchhhccChhhHHHHHHhcCCCCCCCC
Q 002801 267 C---PFSTGEEKTRTMSSLRHR-V----------------------------LPPQLLLKFPKEASFCLWLLHPEPSGRP 314 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~~~~~-~----------------------------~~~~~~~~~~~~~~li~~~L~~dP~~Rp 314 (879)
+ ||............+... . +.......++.+.+|+.+||..+|.+||
T Consensus 211 tg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rp 290 (343)
T cd07851 211 TGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRI 290 (343)
T ss_pred hCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCC
Confidence 9 665443322111111000 0 0011123467788999999999999999
Q ss_pred CHHHHhhcccccCCcCch
Q 002801 315 KMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 315 t~~evl~hp~~~~~~~~~ 332 (879)
|+.++++||||.....+.
T Consensus 291 t~~ell~h~~~~~~~~~~ 308 (343)
T cd07851 291 TAAEALAHPYLAEYHDPE 308 (343)
T ss_pred CHHHHhcCCCccccCCCc
Confidence 999999999998765443
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.1e-27 Score=254.89 Aligned_cols=200 Identities=19% Similarity=0.242 Sum_probs=150.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ ++. .....|++|||+++++|.++.... ..+++.+++.++.||+.||+|||++||+|+||+|
T Consensus 53 ~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p 128 (286)
T cd07846 53 MLKQLRHENLVNLIE-VFR--RKKRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKP 128 (286)
T ss_pred HHHhcCCcchhhHHH-hcc--cCCeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCH
Confidence 445567777777666 443 344689999999999999887544 4589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||++........
T Consensus 129 ~ni~~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 155 (286)
T cd07846 129 ENILVSQSGVVKLCDFGFARTLAAPGE----------------------------------------------------- 155 (286)
T ss_pred HHEEECCCCcEEEEeeeeeeeccCCcc-----------------------------------------------------
Confidence 999999999999999999865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~-- 267 (879)
......++.+|+|||.+.+. .++.++|||||||++|||++
T Consensus 156 -------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~ 198 (286)
T cd07846 156 -------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGE 198 (286)
T ss_pred -------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCC
Confidence 00123678899999998764 47899999999999999999
Q ss_pred -CCCCChhhHhHHhhhcc---------------------cCCC---------chhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 268 -PFSTGEEKTRTMSSLRH---------------------RVLP---------PQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~---------------------~~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
||....... ....+.. ...+ ......+..+.+|+.+||..+|.+||++
T Consensus 199 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~ 277 (286)
T cd07846 199 PLFPGDSDID-QLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSS 277 (286)
T ss_pred CCCCCCchHH-HHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhH
Confidence 453322211 1100000 0000 0122345678899999999999999999
Q ss_pred HHHhhcccc
Q 002801 317 GELLQSEFL 325 (879)
Q Consensus 317 ~evl~hp~~ 325 (879)
.++++||||
T Consensus 278 ~~il~~~~~ 286 (286)
T cd07846 278 SQLLHHEFF 286 (286)
T ss_pred HHHhcCCCC
Confidence 999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-27 Score=247.73 Aligned_cols=197 Identities=12% Similarity=0.087 Sum_probs=151.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+....|++++..++ .+. ....|++|||+.+++|.+++... ...+++..+..++.||+.||.|||+.||+|+|||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~ 129 (260)
T cd05069 54 IMKKLRHDKLVPLYA-VVS---EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLR 129 (260)
T ss_pred HHHhCCCCCeeeEEE-EEc---CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence 345567888777665 443 23579999999999999999543 3457899999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++|+|||+++........
T Consensus 130 ~~Nill~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 158 (260)
T cd05069 130 AANILVGDNLVCKIADFGLARLIEDNEYT--------------------------------------------------- 158 (260)
T ss_pred cceEEEcCCCeEEECCCccceEccCCccc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g 200 (260)
T cd05069 159 --------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKG 200 (260)
T ss_pred --------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCC
Confidence 0011234667999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++.....+..+.+++.+||.+||.+||++.++++
T Consensus 201 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 201 RVPYPGMVN-REVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred CCCCCCCCH-HHHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 6654333 3333334444334444456678899999999999999999999865
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-27 Score=254.86 Aligned_cols=194 Identities=15% Similarity=0.137 Sum_probs=148.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ +|.+ ....|++|||+.+++|.+++... ...+++.++..++.||+.||.|||+
T Consensus 76 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 152 (314)
T cd05099 76 KHKNIINLLG-VCTQ--EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES 152 (314)
T ss_pred CCCCeeeEEE-EEcc--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 5888877666 5543 34579999999999999999542 1357889999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.+|++|||+++.........
T Consensus 153 ~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------------- 191 (314)
T cd05099 153 RRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK----------------------------------------- 191 (314)
T ss_pred CCeeeccccceeEEEcCCCcEEEcccccccccccccccc-----------------------------------------
Confidence 999999999999999999999999999997642110000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||.+.+..++.++|||||||
T Consensus 192 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~ 224 (314)
T cd05099 192 -----------------------------------------------KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGI 224 (314)
T ss_pred -----------------------------------------------ccccCCCCccccCHHHHccCCcCccchhhHHHH
Confidence 000012345799999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++|||++ ||.... .......+.....++.....+..+.+++.+||..+|++||++.++++
T Consensus 225 ~l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 225 LMWEIFTLGGSPYPGIP-VEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred HHHHHHhCCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999997 564332 23333333333333333455678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=236.84 Aligned_cols=280 Identities=19% Similarity=0.298 Sum_probs=219.0
Q ss_pred CCCceecccccCceEEEeecCcEE----EEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCccc-----C
Q 002801 532 RRSGWINPFLEGLCKYLSFSKLRV----KADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII-----N 602 (879)
Q Consensus 532 ~~~~~~~~~~d~~i~~w~~~~~~~----~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~-----~ 602 (879)
.+..|++|+.|..|++||+..+.. .+.|+. .....|+++.|++.|..|++.+..-.++|+|-+... .
T Consensus 178 ~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P----~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~K 253 (641)
T KOG0772|consen 178 SGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQP----CETHQINSLQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSK 253 (641)
T ss_pred CCceeeeccccceEEEEecccccccchhhhccCc----ccccccceeeecCCCCeEEEEecCcceeEEccCCceeeeeec
Confidence 367789999999999999986432 233322 345789999999999999988888899999977521 1
Q ss_pred cCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCe-EEEEec-----cCCCcEEEEEEecCCCCEE
Q 002801 603 ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ-VLTEMR-----EHERRVWSIDFSSADPTLL 676 (879)
Q Consensus 603 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~-~~~~~~-----~h~~~v~sv~~sp~~~~~l 676 (879)
....+.......+|...++|.+|+|.+++.++++++||+++|||++..+ ....++ +-.-++++++|++ +++.|
T Consensus 254 GDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nr-dg~~i 332 (641)
T KOG0772|consen 254 GDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNR-DGKLI 332 (641)
T ss_pred cchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCC-Ccchh
Confidence 1222222333456888999999999999999999999999999997653 222332 2334789999999 99999
Q ss_pred EEEeCCCcEEEEeCCCCce--EEEEe--c--CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC--CCC
Q 002801 677 ASGSDDGSVKLWSINQGVS--IGTIK--T--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH--NKT 748 (879)
Q Consensus 677 asgs~Dg~V~iwd~~~~~~--i~~~~--~--~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h--~~~ 748 (879)
|+|+.||+|.+||.+.... ...+. | ...|+||.|+++ |++|++-+.|+++++||||+.+.|+.+..+- ..+
T Consensus 333 Aagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~d-g~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~ 411 (641)
T KOG0772|consen 333 AAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYD-GNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFP 411 (641)
T ss_pred hhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccc-cchhhhccCCCceeeeeccccccchhhhcCCCccCC
Confidence 9999999999999865422 22222 2 236999999999 9999999999999999999999888877653 345
Q ss_pred EEEEEEc-CCCEEEEEE------cCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEe
Q 002801 749 VSYVKFV-DATTLVSAS------TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 749 V~~v~fs-~~~~l~s~s------~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~ 821 (879)
-+.++|+ +.++|+||+ ..++|.+||..+. ..+..+.-.+..|..+.|+|.=+.|..|+.||.++||.
T Consensus 412 ~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~------d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 412 GTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTL------DTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVYY 485 (641)
T ss_pred CCccccCCCceEEEecccccCCCCCceEEEEeccce------eeEEEecCCCceEEEEeecchhhheeeecCCCceEEEE
Confidence 6788999 888898875 3578999999886 55666666677888999999988888899999999997
Q ss_pred cC
Q 002801 822 KA 823 (879)
Q Consensus 822 ~~ 823 (879)
-.
T Consensus 486 dp 487 (641)
T KOG0772|consen 486 DP 487 (641)
T ss_pred Cc
Confidence 43
|
|
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.4e-27 Score=251.27 Aligned_cols=198 Identities=16% Similarity=0.092 Sum_probs=151.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC--------------CCCChhHHHHHHHHHHHHHHh
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------------RSVDVYECLHIFRQIVEIVYA 97 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------------~~l~~~~~~~i~~qi~~~l~~ 97 (879)
+....|++++..++ .+.+ ....|++|||+.+++|.+++.... ..+++..++.++.||+.||+|
T Consensus 61 l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~ 137 (280)
T cd05092 61 LTVLQHQHIVRFYG-VCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVY 137 (280)
T ss_pred HhcCCCCCCceEEE-EEec--CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHH
Confidence 34457788877665 4443 345799999999999999985432 247899999999999999999
Q ss_pred hhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCC
Q 002801 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (879)
Q Consensus 98 lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (879)
||++||+||||||+|||++.++.+|++|||+++........
T Consensus 138 LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~--------------------------------------- 178 (280)
T cd05092 138 LASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY--------------------------------------- 178 (280)
T ss_pred HHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCcee---------------------------------------
Confidence 99999999999999999999999999999998653111000
Q ss_pred CcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchh
Q 002801 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (879)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwS 257 (879)
.......+++.|+|||.+.+..++.++||||
T Consensus 179 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 209 (280)
T cd05092 179 -------------------------------------------------RVGGRTMLPIRWMPPESILYRKFTTESDIWS 209 (280)
T ss_pred -------------------------------------------------ecCCCccccccccCHHHhccCCcCchhhHHH
Confidence 0001124467899999999888999999999
Q ss_pred HHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 258 lGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|||++|||++ ||......... ........++.....++.+.+++.+||+.||.+||++.++++
T Consensus 210 lG~il~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 210 FGVVLWEIFTYGKQPWYQLSNTEAI-ECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HHHHHHHHHcCCCCCCccCCHHHHH-HHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999986 66444333332 223333233334456788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-27 Score=250.85 Aligned_cols=200 Identities=21% Similarity=0.220 Sum_probs=154.1
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
...+...+|++++..++ .+.+ ....|++|||+++++|.+++. .....+++..++.++.||+.||+|||++||+|
T Consensus 53 ~~~l~~l~h~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H 129 (267)
T cd08228 53 IDLLKQLNHPNVIKYLD-SFIE--DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMH 129 (267)
T ss_pred HHHHHhCCCcceeeeee-eEEE--CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeC
Confidence 33455667888887776 3332 346899999999999998883 23345899999999999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
+||||+||+++.++.++++|||++........
T Consensus 130 ~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------ 161 (267)
T cd08228 130 RDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------------ 161 (267)
T ss_pred CCCCHHHEEEcCCCCEEECccccceeccchhH------------------------------------------------
Confidence 99999999999999999999999865321100
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
......|+..|+|||.+.+..++.++|||||||++|||
T Consensus 162 ------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el 199 (267)
T cd08228 162 ------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred ------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHH
Confidence 00123678889999999888899999999999999999
Q ss_pred hc---CCCCChhh-HhHHhhhcccCCCchh-hccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 266 FC---PFSTGEEK-TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 266 l~---pf~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++ ||...... ......+.....++.. ...+..+.+++.+||..+|++||++.++++
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 200 AALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred hcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 98 77544322 2233333333333332 245567899999999999999999999987
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.3e-27 Score=249.91 Aligned_cols=200 Identities=14% Similarity=0.131 Sum_probs=154.2
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+.+|++++..++ .+. .....|++|||++|++|.+++.+....+++.+++.|+.||+.||+|||++||+||||||
T Consensus 58 ~l~~l~h~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp 134 (267)
T cd05066 58 IMGQFDHPNIIHLEG-VVT--KSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAA 134 (267)
T ss_pred HHHhCCCCCcceEEE-EEe--cCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhch
Confidence 445567888888766 443 23468999999999999999976656789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++.++.++++|||+++........ .
T Consensus 135 ~nili~~~~~~~l~dfg~~~~~~~~~~~--~------------------------------------------------- 163 (267)
T cd05066 135 RNILVNSNLVCKVSDFGLSRVLEDDPEA--A------------------------------------------------- 163 (267)
T ss_pred hcEEECCCCeEEeCCCCcccccccccce--e-------------------------------------------------
Confidence 9999999999999999999764211000 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 164 ------------------------------------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~ 207 (267)
T cd05066 164 ------------------------------------YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 207 (267)
T ss_pred ------------------------------------eecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCC
Confidence 00011133567999999998889999999999999999875
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||....... ....+.....++.....++.+.+++.+||+++|.+||++.++++
T Consensus 208 ~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 208 RPYWEMSNQD-VIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred CCcccCCHHH-HHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 665443322 22333333334444556778899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-27 Score=248.93 Aligned_cols=191 Identities=14% Similarity=0.124 Sum_probs=145.9
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC---------------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~---------------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ .+.. ...+|++|||+.+++|.+++.... ..+++..++.++.||+.||+|||+
T Consensus 54 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~ 130 (270)
T cd05047 54 HHPNIINLLG-ACEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ 130 (270)
T ss_pred cCCCeeeEEE-EEec--CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6777777666 4443 345899999999999999985421 247899999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
.||+||||||+||+++.++.+|++|||+++..... .
T Consensus 131 ~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--~------------------------------------------ 166 (270)
T cd05047 131 KQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--V------------------------------------------ 166 (270)
T ss_pred CCEeecccccceEEEcCCCeEEECCCCCccccchh--h------------------------------------------
Confidence 99999999999999999999999999997531000 0
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
.......+..|+|||++.+..++.++|||||||
T Consensus 167 -----------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~ 199 (270)
T cd05047 167 -----------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGV 199 (270)
T ss_pred -----------------------------------------------hccCCCCccccCChHHHccCCCCchhhHHHHHH
Confidence 000012255699999998888999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++|||++ ||..... ......+......+.....+..+.+++.+||..+|.+|||+.++++
T Consensus 200 il~el~~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 200 LLWEIVSLGGTPYCGMTC-AELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred HHHHHHcCCCCCccccCH-HHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 9999995 7744332 2223333333233333445677889999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.3e-27 Score=246.66 Aligned_cols=200 Identities=22% Similarity=0.249 Sum_probs=158.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
+...+|++++...+. ..+ ....+++|||++|++|.+++... ...+++.++..++.||+.||.|||++||+|+||
T Consensus 53 l~~l~~~~~~~~~~~-~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl 129 (258)
T cd08215 53 LKKLNHPNIIKYYES-FEE--KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDI 129 (258)
T ss_pred HHhcCCCChhheEEE-Eec--CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccC
Confidence 444567777776652 222 25789999999999999999553 367899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
+|+||+++.++.++++|||.+........
T Consensus 130 ~~~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------------- 158 (258)
T cd08215 130 KPQNIFLTSNGLVKLGDFGISKVLSSTVD--------------------------------------------------- 158 (258)
T ss_pred ChHHeEEcCCCcEEECCccceeecccCcc---------------------------------------------------
Confidence 99999999999999999999865322100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
......|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g 199 (258)
T cd08215 159 ---------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTL 199 (258)
T ss_pred ---------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcC
Confidence 0012367888999999988889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..... ......+.....++.....+..+.+++.+||..+|++||++.++++||||
T Consensus 200 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 200 KHPFEGENL-LELALKILKGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred CCCCCCCcH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 6654432 33333333333444444566788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=253.66 Aligned_cols=214 Identities=14% Similarity=0.161 Sum_probs=150.5
Q ss_pred eecccccccCCCCCCccccccc------ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
.+...+|++++..++ .+.+.. ...+|++|||+.+ +|..++......+++.+++.++.||++||+|||++||+
T Consensus 60 ~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~ 137 (311)
T cd07866 60 ILKKLKHPNVVPLID-MAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHIL 137 (311)
T ss_pred HHHhcCCCCccchhh-heecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 344557777777665 332222 2357999999865 67777755556799999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
|+||||+||+++.++.++++|||+++...........
T Consensus 138 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------------------------------------------- 174 (311)
T cd07866 138 HRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG------------------------------------------- 174 (311)
T ss_pred cCCCCHHHEEECCCCCEEECcCccchhccCCCccccc-------------------------------------------
Confidence 9999999999999999999999999764221100000
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ 263 (879)
.........+...|++.|+|||.+.+. .++.++|||||||++|
T Consensus 175 ------------------------------------~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 218 (311)
T cd07866 175 ------------------------------------GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFA 218 (311)
T ss_pred ------------------------------------CCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHH
Confidence 000000012345789999999988764 4899999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhh--ccc----------------------CCCc----hhhccChhhHHHHHHhcCCCCCC
Q 002801 264 ELFC---PFSTGEEKTRTMSSL--RHR----------------------VLPP----QLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~--~~~----------------------~~~~----~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
||++ ||............. ... ..++ .+....+.+.+||.+||..||.+
T Consensus 219 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~ 298 (311)
T cd07866 219 EMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYK 298 (311)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCccc
Confidence 9999 553332211111100 000 0011 11223456789999999999999
Q ss_pred CCCHHHHhhcccc
Q 002801 313 RPKMGELLQSEFL 325 (879)
Q Consensus 313 Rpt~~evl~hp~~ 325 (879)
|||+.+++.||||
T Consensus 299 R~t~~ell~~~~f 311 (311)
T cd07866 299 RLTASDALEHPYF 311 (311)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.5e-27 Score=250.39 Aligned_cols=202 Identities=18% Similarity=0.194 Sum_probs=157.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ....|+||||+.+++|.+++.. ..+++..+..++.||+.||.|||+.||+|+||||
T Consensus 55 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p 129 (277)
T cd06641 55 VLSQCDSPYVTKYYG-SYLK--DTKLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKA 129 (277)
T ss_pred HHHhcCCCCEeEEEE-EEEe--CCeEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCH
Confidence 445567888877766 3332 3468999999999999999954 3589999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||+++.......
T Consensus 130 ~Ni~i~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------------- 156 (277)
T cd06641 130 ANVLLSEHGEVKLADFGVAGQLTDTQI----------------------------------------------------- 156 (277)
T ss_pred HhEEECCCCCEEEeecccceecccchh-----------------------------------------------------
Confidence 999999999999999998865311100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......|+.+|+|||.+.+..++.++|||||||++|||++
T Consensus 157 -------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 199 (277)
T cd06641 157 -------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEP 199 (277)
T ss_pred -------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 0012367889999999988888999999999999999999
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
||..... ......+.....+......+..+.+++.+||..+|.+||++.++++||||...
T Consensus 200 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 200 PHSELHP-MKVLFLIPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred CCCccch-HHHHHHHhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 6643332 22222222232333333456778999999999999999999999999999863
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-27 Score=253.99 Aligned_cols=198 Identities=15% Similarity=0.117 Sum_probs=148.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC----------CCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----------~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
+....|++++..++ .+.++ ...+++|||+.+++|.++|.+.. ..+++..++.++.||+.||+|||++
T Consensus 73 l~~l~~~~i~~~~~-~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~ 149 (296)
T cd05051 73 LSRLSDPNIARLLG-VCTVD--PPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL 149 (296)
T ss_pred HHhcCCCCEeEEEE-EEecC--CCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc
Confidence 44456777777665 44433 56899999999999999995432 2689999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.++++|||+++........
T Consensus 150 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------- 186 (296)
T cd05051 150 NFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYY------------------------------------------- 186 (296)
T ss_pred CccccccchhceeecCCCceEEccccceeecccCcce-------------------------------------------
Confidence 9999999999999999999999999998653111000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
.......++..|+|||.+.+..++.++|||||||+
T Consensus 187 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 221 (296)
T cd05051 187 ---------------------------------------------RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVT 221 (296)
T ss_pred ---------------------------------------------eecCcCCCCceecCHHHhhcCCCCccchhhhhHHH
Confidence 00012355778999999988889999999999999
Q ss_pred HHHhhc-----CCCCChhhHhHHhhhcc-------cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 262 LFELFC-----PFSTGEEKTRTMSSLRH-------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 262 l~ell~-----pf~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||++ ||....... ....+.. ....+.....++.+.+++.+||..||.+|||+.++++
T Consensus 222 l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 222 LWEILTLCREQPYEHLTDQQ-VIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred HHHHHhcCCCCCCCCcChHH-HHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 999986 554332222 2222111 1112223344578899999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=245.91 Aligned_cols=196 Identities=15% Similarity=0.138 Sum_probs=153.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
+...+|++++..++ .+.+ ....|++|||+++++|.+++.+ ....+++..++.++.||+.||.|||++||+|+||||
T Consensus 56 l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~ 132 (261)
T cd05148 56 LKRLRHKHLISLFA-VCSV--GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAA 132 (261)
T ss_pred HhcCCCcchhheee-eEec--CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCc
Confidence 44557888877666 4433 3467999999999999999955 335689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||.+.........
T Consensus 133 ~nilv~~~~~~kl~d~g~~~~~~~~~~~---------------------------------------------------- 160 (261)
T cd05148 133 RNILVGEDLVCKVADFGLARLIKEDVYL---------------------------------------------------- 160 (261)
T ss_pred ceEEEcCCceEEEccccchhhcCCcccc----------------------------------------------------
Confidence 9999999999999999998654211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.....++..|+|||.+.+..++.++|||||||++|+|++
T Consensus 161 --------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~ 202 (261)
T cd05148 161 --------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQ 202 (261)
T ss_pred --------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCC
Confidence 001234667999999988889999999999999999996
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+.....++.....++.+.+++.+||..||.+|||+.++++
T Consensus 203 ~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 203 VPYPGMNN-HEVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred CCCCcCCH-HHHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 6644332 2233333333344445566788999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-27 Score=259.60 Aligned_cols=205 Identities=16% Similarity=0.228 Sum_probs=151.9
Q ss_pred ceeecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
...+....|++++..++ ++.... ....|++|||+. .+|..++. ..+++.++..++.||+.||+|||++||+
T Consensus 65 ~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~ 139 (342)
T cd07879 65 LTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGII 139 (342)
T ss_pred HHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 33455567888877666 443221 124589999985 47877763 3589999999999999999999999999
Q ss_pred cccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccc
Q 002801 105 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 184 (879)
Q Consensus 105 HrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (879)
||||||+||+++.++.+|++|||+++.....
T Consensus 140 H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~------------------------------------------------- 170 (342)
T cd07879 140 HRDLKPGNLAVNEDCELKILDFGLARHADAE------------------------------------------------- 170 (342)
T ss_pred cCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-------------------------------------------------
Confidence 9999999999999999999999998652110
Q ss_pred cccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHH
Q 002801 185 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 263 (879)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ 263 (879)
.....|+++|+|||.+.+ ..++.++|||||||+||
T Consensus 171 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~ 206 (342)
T cd07879 171 --------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMA 206 (342)
T ss_pred --------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHHHH
Confidence 012367889999999876 45899999999999999
Q ss_pred Hhhc---CCCCChhhHhHHhhhcc------------------------cCCC-----chhhccChhhHHHHHHhcCCCCC
Q 002801 264 ELFC---PFSTGEEKTRTMSSLRH------------------------RVLP-----PQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 264 ell~---pf~~~~~~~~~~~~~~~------------------------~~~~-----~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
||++ ||............+.. ...+ ..+...++.+.+||.+||+.||.
T Consensus 207 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~ 286 (342)
T cd07879 207 EMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVD 286 (342)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChh
Confidence 9999 77544322111111100 0000 11123456788999999999999
Q ss_pred CCCCHHHHhhcccccCCcCc
Q 002801 312 GRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 312 ~Rpt~~evl~hp~~~~~~~~ 331 (879)
+||++.+++.||||......
T Consensus 287 ~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 287 KRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hCcCHHHHhcCcchhhcccc
Confidence 99999999999999886543
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.1e-26 Score=251.01 Aligned_cols=202 Identities=16% Similarity=0.160 Sum_probs=149.7
Q ss_pred eccc-ccccCCCCCCcccccccccCceEEEEeeCCcchhhh---h-cCCCCCCChhHHHHHHHHHHHHHHhhhhc-Cccc
Q 002801 32 LTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQW---L-DKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 105 (879)
Q Consensus 32 ~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~---l-~~~~~~l~~~~~~~i~~qi~~~l~~lHs~-givH 105 (879)
+.+. +|++++..++ .+.+ ....|++|||+.+ +|.++ + ......+++..+..++.|++.||+|||+. ||+|
T Consensus 56 l~~~~~~~~iv~~~~-~~~~--~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H 131 (288)
T cd06616 56 VMRSSDCPYIVKFYG-ALFR--EGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIH 131 (288)
T ss_pred HHHhcCCCCEeeeee-EEec--CCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeec
Confidence 3343 4788877776 4433 3467999999854 54443 3 12235789999999999999999999975 9999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++.++.+|++|||+++......
T Consensus 132 ~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 162 (288)
T cd06616 132 RDVKPSNILLDRNGNIKLCDFGISGQLVDSI------------------------------------------------- 162 (288)
T ss_pred cCCCHHHEEEccCCcEEEeecchhHHhccCC-------------------------------------------------
Confidence 9999999999999999999999986531110
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC---CCCccCcchhHHHHH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 262 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDIwSlGvil 262 (879)
......|+..|+|||++.+. .++.++|||||||++
T Consensus 163 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il 200 (288)
T cd06616 163 ------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITL 200 (288)
T ss_pred ------------------------------------------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHH
Confidence 00113578889999999876 589999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhhhcccCCCc----hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
|||++ ||.........+........+. .....++.+.+|+.+||..+|++|||+.+++.||||...
T Consensus 201 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 201 YEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred HHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 99998 7754432222222222221111 112356788999999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.6e-27 Score=251.54 Aligned_cols=201 Identities=16% Similarity=0.209 Sum_probs=151.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+.+.+|++++..++ .+.+ ....|++|||+. ++|.+++.... ..+++..++.++.||+.||+|||++|++|+||+
T Consensus 51 ~l~~l~~~~iv~~~~-~~~~--~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~ 126 (283)
T cd07835 51 LLKELNHPNIVRLLD-VVHS--ENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLK 126 (283)
T ss_pred HHHhcCCCCccCHhh-eecc--CCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence 345567888877776 4443 356899999994 68999985543 368999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||+++.......
T Consensus 127 p~nil~~~~~~~~l~df~~~~~~~~~~~---------------------------------------------------- 154 (283)
T cd07835 127 PQNLLIDREGALKLADFGLARAFGVPVR---------------------------------------------------- 154 (283)
T ss_pred HHHEEEcCCCcEEEeecccccccCCCcc----------------------------------------------------
Confidence 9999999999999999999865321100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~- 267 (879)
......++..|+|||.+.+. .++.++|||||||++|||++
T Consensus 155 --------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 196 (283)
T cd07835 155 --------------------------------------TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNR 196 (283)
T ss_pred --------------------------------------ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhC
Confidence 00112557889999988765 47999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcc------------------------c---CCCchhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 --PFSTGEEKTRTMSSLRH------------------------R---VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~------------------------~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||.............+. . .........++.+.++|.+||+.+|.+|||+.|
T Consensus 197 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 276 (283)
T cd07835 197 RPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKA 276 (283)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHH
Confidence 66544332222111110 0 000112234467889999999999999999999
Q ss_pred Hhhcccc
Q 002801 319 LLQSEFL 325 (879)
Q Consensus 319 vl~hp~~ 325 (879)
+++||||
T Consensus 277 il~~~~~ 283 (283)
T cd07835 277 ALQHPYF 283 (283)
T ss_pred HhcCCCC
Confidence 9999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=247.39 Aligned_cols=194 Identities=14% Similarity=0.109 Sum_probs=151.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|.++++... ..+++..+..++.|++.||.|||++||+|+|||
T Consensus 53 ~l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~ 129 (256)
T cd05039 53 VMTTLRHPNLVQLLG-VVLQ--GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLA 129 (256)
T ss_pred HHHhcCCcceeeeEE-EEcC--CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcc
Confidence 344556778777666 4443 456899999999999999995443 368999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||.++......
T Consensus 130 p~Nili~~~~~~~l~d~g~~~~~~~~~----------------------------------------------------- 156 (256)
T cd05039 130 ARNVLVSEDLVAKVSDFGLAKEASQGQ----------------------------------------------------- 156 (256)
T ss_pred cceEEEeCCCCEEEccccccccccccc-----------------------------------------------------
Confidence 999999999999999999986531100
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ----------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g 196 (256)
T cd05039 157 ----------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFG 196 (256)
T ss_pred ----------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcC
Confidence 00123456999999988889999999999999999986
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||... ........+.....+......++.+.+++.+||..+|++||++.++++
T Consensus 197 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 197 RVPYPRI-PLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CCCCCCC-CHHHHHHHHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 66443 223333333333333333455678899999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-27 Score=254.39 Aligned_cols=198 Identities=17% Similarity=0.109 Sum_probs=152.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|+|++..++ .|... ..++++||+.+|+|.+++......+++..+..++.||+.||.|||++||+||||||
T Consensus 62 ~~~~l~h~niv~~~~-~~~~~---~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp 137 (303)
T cd05110 62 IMASMDHPHLVRLLG-VCLSP---TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAA 137 (303)
T ss_pred HHHhCCCCCcccEEE-EEcCC---CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeecccccc
Confidence 345567888888776 55432 46799999999999999976656789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||+++........
T Consensus 138 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~---------------------------------------------------- 165 (303)
T cd05110 138 RNVLVKSPNHVKITDFGLARLLEGDEKE---------------------------------------------------- 165 (303)
T ss_pred ceeeecCCCceEEccccccccccCcccc----------------------------------------------------
Confidence 9999999999999999999754211000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
.......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 ------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~ 209 (303)
T cd05110 166 ------------------------------------YNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 209 (303)
T ss_pred ------------------------------------cccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCC
Confidence 00011244678999999998889999999999999999985
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++........+.+++.+||..+|++||++.++++
T Consensus 210 ~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 210 KPYDGIP-TREIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred CCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 664432 22222333333333334455678899999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=244.94 Aligned_cols=198 Identities=17% Similarity=0.188 Sum_probs=150.5
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|++|||+.|++|.+++.+....+++..++.++.|++.||+|||++||+||||||+
T Consensus 46 l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~ 122 (251)
T cd05041 46 LKQYDHPNIVKLIG-VCVQ--KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAAR 122 (251)
T ss_pred HHhCCCCCeEEEEE-EEec--CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcc
Confidence 44557777766555 4433 34689999999999999999665567899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||+++........ .
T Consensus 123 nili~~~~~~~l~d~g~~~~~~~~~~~--~-------------------------------------------------- 150 (251)
T cd05041 123 NCLVGENNVLKISDFGMSREEEGGIYT--V-------------------------------------------------- 150 (251)
T ss_pred eEEEcCCCcEEEeeccccccccCCcce--e--------------------------------------------------
Confidence 999999999999999998653211000 0
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 151 ------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~ 194 (251)
T cd05041 151 ------------------------------------SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDT 194 (251)
T ss_pred ------------------------------------ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCC
Confidence 0000122456999999988889999999999999999997
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.....+..+.+++.+||..+|.+||++.|+++
T Consensus 195 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 195 PYPGMSN-QQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred CCccCCH-HHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 5644332 2222233332222333455678899999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.9e-27 Score=267.61 Aligned_cols=206 Identities=18% Similarity=0.194 Sum_probs=169.5
Q ss_pred cccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-------------CCCCChhHHHHH
Q 002801 21 FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-------------KRSVDVYECLHI 87 (879)
Q Consensus 21 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-------------~~~l~~~~~~~i 87 (879)
..||+|.+ .++..+|+|+|.+++ +|.+ +.-++||.|||..|+|.++|+.. +.+|+..+.++|
T Consensus 534 ~dF~REae--Lla~l~H~nIVrLlG-VC~~--~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~i 608 (774)
T KOG1026|consen 534 QDFRREAE--LLAELQHPNIVRLLG-VCRE--GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHI 608 (774)
T ss_pred HHHHHHHH--HHHhccCCCeEEEEE-EEcc--CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHH
Confidence 45776655 467789999999888 9975 34579999999999999999421 123888999999
Q ss_pred HHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcc
Q 002801 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (879)
Q Consensus 88 ~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (879)
+.||+.|++||-++.+|||||-..|.|+.+.-.|||+|||++++.-+...- |..
T Consensus 609 A~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYY--------------------------k~~ 662 (774)
T KOG1026|consen 609 ATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYY--------------------------KVR 662 (774)
T ss_pred HHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhh--------------------------ccc
Confidence 999999999999999999999999999999999999999999885221110 000
Q ss_pred ccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC
Q 002801 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (879)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (879)
.. -+=...|||||.|..+
T Consensus 663 ~~--------------------------------------------------------------t~lPIRWMppEsIly~ 680 (774)
T KOG1026|consen 663 GN--------------------------------------------------------------TLLPIRWMPPESILYG 680 (774)
T ss_pred CC--------------------------------------------------------------ceeeeecCCHHHhhcC
Confidence 00 0114469999999999
Q ss_pred CCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 248 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 248 ~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
.|+++|||||+||+|||+++ ||+.. .+.+.+..++.+..-+.+..++.++..|+..||+.+|++||++.||-
T Consensus 681 kFTteSDVWs~GVvLWEIFsyG~QPy~gl-Sn~EVIe~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 681 KFTTESDVWSFGVVLWEIFSYGKQPYYGL-SNQEVIECIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred cccchhhhhhhhhhhhhhhccccCccccc-chHHHHHHHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 99999999999999999999 88654 45566777777777788888999999999999999999999999984
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=249.70 Aligned_cols=201 Identities=15% Similarity=0.173 Sum_probs=149.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ .+.+ ....|++|||++++.|..++++. ..+++.++..++.||+.||.|||++||+|+||||+
T Consensus 54 l~~l~~~~i~~~~~-~~~~--~~~~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ 129 (288)
T cd07833 54 LRQLRHENIVNLKE-AFRR--KGRLYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPE 129 (288)
T ss_pred HHhcCCCCeeehhh-eEEE--CCEEEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence 33445777766665 4433 44689999999987777666443 56899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+||+|||++.........
T Consensus 130 ni~~~~~~~~kl~d~g~~~~~~~~~~~----------------------------------------------------- 156 (288)
T cd07833 130 NILVSESGVLKLCDFGFARALRARPAS----------------------------------------------------- 156 (288)
T ss_pred HeEECCCCCEEEEeeecccccCCCccc-----------------------------------------------------
Confidence 999999999999999998664211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~--- 267 (879)
......++.+|+|||++.+. .++.++|||||||+||||++
T Consensus 157 ------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~ 200 (288)
T cd07833 157 ------------------------------------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEP 200 (288)
T ss_pred ------------------------------------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCC
Confidence 00224678999999999888 78999999999999999999
Q ss_pred CCCCChhhHhHHhhhc--c-----------------c-CCCc----------hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 PFSTGEEKTRTMSSLR--H-----------------R-VLPP----------QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~--~-----------------~-~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.............. . . ..++ .....++.+.+||.+||..+|++||+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ 280 (288)
T cd07833 201 LFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCD 280 (288)
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHH
Confidence 5543322221111000 0 0 0000 0011256788999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
++++||||
T Consensus 281 ~il~~~~f 288 (288)
T cd07833 281 ELLQHPYF 288 (288)
T ss_pred HHhcCCCC
Confidence 99999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2e-26 Score=246.30 Aligned_cols=198 Identities=16% Similarity=0.125 Sum_probs=144.8
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---CCCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
+...+|++++..++ .|.+ ....|++|||+.+++|.+++.+. ...+++..++.++.||+.||+|||++||+||||
T Consensus 49 ~~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~di 125 (268)
T cd05086 49 YRILQHPNILQCLG-QCVE--AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDL 125 (268)
T ss_pred HhccCCcchhheEE-EecC--CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 34467888888776 5543 34679999999999999999543 234677788999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+|||++.++.+|++|||++.........
T Consensus 126 kp~nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------------------------- 155 (268)
T cd05086 126 ALRNCFLTSDLTVKVGDYGIGPSRYKEDYI-------------------------------------------------- 155 (268)
T ss_pred ccceEEEcCCccEEecccccccccCcchhh--------------------------------------------------
Confidence 999999999999999999987532100000
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-------CCCCccCcchhHHHH
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDIYRLGVL 261 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDIwSlGvi 261 (879)
.......|+..|+|||++.. ..++.++|||||||+
T Consensus 156 --------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~ 197 (268)
T cd05086 156 --------------------------------------ETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVT 197 (268)
T ss_pred --------------------------------------hcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHH
Confidence 00012367888999998853 235789999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccC---C-CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRV---L-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
+|||++ ||............+.... . +.......+.+.+++..|| .+|.+||++.++++
T Consensus 198 l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 198 LWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 999986 6654443333332222221 1 2222345567889999999 67999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.6e-27 Score=251.81 Aligned_cols=201 Identities=19% Similarity=0.262 Sum_probs=152.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ .+.+ ...+|++|||+++ +|.+++......+++.+++.++.||+.||.|||++||+|+||||
T Consensus 51 ~l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p 126 (283)
T cd05118 51 LLKELNHPNIIKLLD-VFRH--KGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKP 126 (283)
T ss_pred HHHHhcCCCcchHHH-hhcc--CCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCH
Confidence 344556777777666 4443 3578999999975 88888866556899999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+........
T Consensus 127 ~nili~~~~~~~l~df~~~~~~~~~~~----------------------------------------------------- 153 (283)
T cd05118 127 ENLLINTEGVLKLADFGLARSFGSPVR----------------------------------------------------- 153 (283)
T ss_pred HHEEECCCCcEEEeeeeeeEecCCCcc-----------------------------------------------------
Confidence 999999999999999999865422100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~-- 267 (879)
......++.+|+|||.+.+. .++.++|||||||++|+|++
T Consensus 154 -------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~ 196 (283)
T cd05118 154 -------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRR 196 (283)
T ss_pred -------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCC
Confidence 00113568899999999876 68999999999999999999
Q ss_pred -CCCCChhhHhHHhhhccc----------------------------CCCchhhccChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 -PFSTGEEKTRTMSSLRHR----------------------------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||................ .........+.++.+||.+||.+||.+||++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 276 (283)
T cd05118 197 PLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQ 276 (283)
T ss_pred CCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHH
Confidence 564433222111111000 000112235677889999999999999999999
Q ss_pred Hhhcccc
Q 002801 319 LLQSEFL 325 (879)
Q Consensus 319 vl~hp~~ 325 (879)
++.||||
T Consensus 277 ll~~~~~ 283 (283)
T cd05118 277 ALAHPYF 283 (283)
T ss_pred HhhCCCC
Confidence 9999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.1e-27 Score=252.41 Aligned_cols=199 Identities=23% Similarity=0.234 Sum_probs=150.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-CCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|+|++..++ +|.+ ....++||||+.+|+|.++|... ...+++..+..|+.||+.||.|||+++|+|+||+
T Consensus 54 ~l~~l~h~ni~~~~g-~~~~--~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~ 130 (259)
T PF07714_consen 54 ILRKLRHPNIVKLYG-FCIE--NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLS 130 (259)
T ss_dssp HHHTHSBTTBE-EEE-EEES--SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred ccccccccccccccc-cccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 444568888888776 6762 33489999999999999999654 5678999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+||+|||+++........
T Consensus 131 ~~nill~~~~~~Kl~~f~~~~~~~~~~~~--------------------------------------------------- 159 (259)
T PF07714_consen 131 PSNILLDSNGQVKLSDFGLSRPISEKSKY--------------------------------------------------- 159 (259)
T ss_dssp GGGEEEETTTEEEEESTTTGEETTTSSSE---------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccc---------------------------------------------------
Confidence 99999999999999999998653111000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
.......+...|+|||.+.+..++.++||||||+++|||++
T Consensus 160 -------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~ 202 (259)
T PF07714_consen 160 -------------------------------------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLG 202 (259)
T ss_dssp -------------------------------------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTS
T ss_pred -------------------------------------ccccccccccccccccccccccccccccccccccccccccccc
Confidence 00011245677999999988889999999999999999999
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||... ........+.....++.....+..+.+++..||..+|.+||++.++++
T Consensus 203 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 203 KFPFSDY-DNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp SGTTTTS-CHHHHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccc-ccccccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 66554 333344444444444455556788999999999999999999999975
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=249.86 Aligned_cols=200 Identities=19% Similarity=0.213 Sum_probs=148.9
Q ss_pred cccccccCCCCCCcccccccc---cCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 33 THGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~---~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
...+|++++..++ .+.+... ...|++|||+.+ +|.+++.... ..+++..++.++.||+.||.|||+.||+|+||
T Consensus 56 ~~~~h~~i~~~~~-~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l 133 (287)
T cd07838 56 ESFEHPNIVRLLD-VCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDL 133 (287)
T ss_pred hccCCCCcceEEE-EEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccC
Confidence 3346888877766 4433221 248999999975 8999885432 36899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.+|++|||.+........
T Consensus 134 ~~~nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------------- 162 (287)
T cd07838 134 KPQNILVTSDGQVKIADFGLARIYSFEMA--------------------------------------------------- 162 (287)
T ss_pred ChhhEEEccCCCEEEeccCcceeccCCcc---------------------------------------------------
Confidence 99999999999999999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc-
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~- 267 (879)
.....++..|+|||.+.+..++.++|||||||++|||++
T Consensus 163 ----------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~ 202 (287)
T cd07838 163 ----------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRR 202 (287)
T ss_pred ----------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhC
Confidence 011246888999999999889999999999999999998
Q ss_pred --CCCCChhhHhHHhhhcc-----------------cCC----C----chhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 268 --PFSTGEEKTRTMSSLRH-----------------RVL----P----PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~-----------------~~~----~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
||............... ... + .......+.+.++|.+||..||.+||++.+++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il 282 (287)
T cd07838 203 RPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEAL 282 (287)
T ss_pred CCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHh
Confidence 55433222211111110 000 0 01122346678999999999999999999999
Q ss_pred hcccc
Q 002801 321 QSEFL 325 (879)
Q Consensus 321 ~hp~~ 325 (879)
+||||
T Consensus 283 ~~~~~ 287 (287)
T cd07838 283 QHPYF 287 (287)
T ss_pred cCcCC
Confidence 99997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=247.01 Aligned_cols=200 Identities=12% Similarity=0.142 Sum_probs=153.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+.+..|++++..++ .+.+ ...+|++|||+.+++|.+++......+++.+++.++.|++.||+|||+.||+||||||
T Consensus 59 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp 135 (268)
T cd05063 59 IMGQFSHHNIIRLEG-VVTK--FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAA 135 (268)
T ss_pred HHhcCCCCCeeEEEE-EEcc--CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccch
Confidence 345567787777665 4433 3468999999999999999976556789999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.+|++|||++..........
T Consensus 136 ~Nili~~~~~~kl~dfg~~~~~~~~~~~~--------------------------------------------------- 164 (268)
T cd05063 136 RNILVNSNLECKVSDFGLSRVLEDDPEGT--------------------------------------------------- 164 (268)
T ss_pred hhEEEcCCCcEEECCCccceecccccccc---------------------------------------------------
Confidence 99999999999999999986532110000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
+ .......+..|+|||++.+..++.++|||||||++|||++
T Consensus 165 ----------------------------------~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~ 208 (268)
T cd05063 165 ----------------------------------Y--TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGE 208 (268)
T ss_pred ----------------------------------e--eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCC
Confidence 0 0000122456999999988889999999999999999886
Q ss_pred -CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.....+..+.+++.+||..+|++||++.++++
T Consensus 209 ~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 209 RPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred CCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 7754333 3344444444344444556788899999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=268.05 Aligned_cols=200 Identities=16% Similarity=0.232 Sum_probs=151.1
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCC--CC-ChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKR--SV-DVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~--~l-~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.-.|+|+|.+|| .+......||..|+| ..+|.++++.... .. ...+.+.++.|++.||++||+.+||||||||
T Consensus 559 SD~H~NviRyyc---~E~d~qF~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkP 634 (903)
T KOG1027|consen 559 SDEHPNVIRYYC---SEQDRQFLYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKP 634 (903)
T ss_pred ccCCCceEEEEe---eccCCceEEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCC
Confidence 458999999887 333455789999999 6799999966311 11 1145688999999999999999999999999
Q ss_pred cceeecc---C--CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 111 SCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 111 ~NIll~~---~--~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
.||||+. . ..++|.|||+|+.+......
T Consensus 635 QNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS----------------------------------------------- 667 (903)
T KOG1027|consen 635 QNILISVPSADGTLRAKISDFGLSKKLAGGKSS----------------------------------------------- 667 (903)
T ss_pred ceEEEEccCCCcceeEEecccccccccCCCcch-----------------------------------------------
Confidence 9999975 2 36899999999886433110
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHh
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~el 265 (879)
+. +.....||..|+|||++....-+.++||+||||++|+.
T Consensus 668 ---------------------------------------~~-r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYv 707 (903)
T KOG1027|consen 668 ---------------------------------------FS-RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYV 707 (903)
T ss_pred ---------------------------------------hh-cccCCCCcccccCHHHHhccccCcccchhhcCceEEEE
Confidence 00 11335789999999999999888899999999999999
Q ss_pred hc----CCCCChhhHhHHhhhcccCCCchhhccCh--hhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 266 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 266 l~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
++ ||........ .+..+...-......+ .+.+||.+|++++|..||+|.+||.||||-.
T Consensus 708 ltgG~HpFGd~~~R~~---NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~ 772 (903)
T KOG1027|consen 708 LTGGSHPFGDSLERQA---NILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWD 772 (903)
T ss_pred ecCCccCCCchHHhhh---hhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence 99 8865443322 2222211111111112 7889999999999999999999999999975
|
|
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-26 Score=250.58 Aligned_cols=200 Identities=18% Similarity=0.214 Sum_probs=151.2
Q ss_pred cccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCCCcce
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCF 113 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlKP~NI 113 (879)
..|++++..++ .|.+ ....|++|||+. ++|..++......+++..+..++.||+.||.|||+ .||+||||||+||
T Consensus 71 ~~~~~i~~~~~-~~~~--~~~~~~v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~ni 146 (296)
T cd06618 71 HDCPYIVKCYG-YFIT--DSDVFICMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNI 146 (296)
T ss_pred cCCCchHhhhe-eeec--CCeEEEEeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHE
Confidence 35788887776 5543 346899999984 57777775544578999999999999999999997 5999999999999
Q ss_pred eeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccccc
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
+++.++.+||+|||++.......
T Consensus 147 ll~~~~~~kL~dfg~~~~~~~~~--------------------------------------------------------- 169 (296)
T cd06618 147 LLDASGNVKLCDFGISGRLVDSK--------------------------------------------------------- 169 (296)
T ss_pred EEcCCCCEEECccccchhccCCC---------------------------------------------------------
Confidence 99999999999999986531110
Q ss_pred CcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC----CCccCcchhHHHHHHHhhc--
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 170 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~ 215 (296)
T cd06618 170 ----------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215 (296)
T ss_pred ----------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCC
Confidence 001124677899999987553 8899999999999999999
Q ss_pred -CCCCChhhHhHHhhhcccCCC--chhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~ 329 (879)
||..................+ +........+.+|+.+||..||.+||++.++++||||....
T Consensus 216 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 280 (296)
T cd06618 216 FPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE 280 (296)
T ss_pred CCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence 775533322222222222111 12223567789999999999999999999999999998644
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.6e-26 Score=255.31 Aligned_cols=195 Identities=16% Similarity=0.142 Sum_probs=149.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------CCCCChhHHHHHHHHHHHHHHhhhh
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------~~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ .|.+ ....|++|||+.+++|.++|.+. ...+++.+++.++.||+.||+|||+
T Consensus 76 ~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~ 152 (334)
T cd05100 76 KHKNIINLLG-ACTQ--DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS 152 (334)
T ss_pred CCCCeeeeeE-EEcc--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 6788877666 5543 33679999999999999998542 1247888999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.+||+|||+++.........
T Consensus 153 ~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------------- 191 (334)
T cd05100 153 QKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK----------------------------------------- 191 (334)
T ss_pred CCeeccccccceEEEcCCCcEEECCcccceecccccccc-----------------------------------------
Confidence 999999999999999999999999999986532110000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
......++..|+|||++.+..++.++|||||||
T Consensus 192 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 224 (334)
T cd05100 192 -----------------------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGV 224 (334)
T ss_pred -----------------------------------------------cccCCCcCceEcCHHHhccCCcCchhhhHHHHH
Confidence 001113356799999999988999999999999
Q ss_pred HHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+||||++ ||... ........+.....++.....+..+.+++.+||+.+|.+||++.+++++
T Consensus 225 il~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~ 289 (334)
T cd05100 225 LLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED 289 (334)
T ss_pred HHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence 9999986 56433 3333333333333334444566788999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=245.87 Aligned_cols=198 Identities=14% Similarity=0.141 Sum_probs=151.1
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ .+.+ ....|++|||+.+++|.+++......+++..++.++.|++.||+|||+.||+|+||||+
T Consensus 53 l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ 129 (256)
T cd05112 53 MMKLSHPKLVQLYG-VCTE--RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAAR 129 (256)
T ss_pred HHhCCCCCeeeEEE-EEcc--CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccc
Confidence 34457778777666 4433 34679999999999999999665567899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||+++........
T Consensus 130 ni~i~~~~~~~l~d~g~~~~~~~~~~~----------------------------------------------------- 156 (256)
T cd05112 130 NCLVGENQVVKVSDFGMTRFVLDDQYT----------------------------------------------------- 156 (256)
T ss_pred eEEEcCCCeEEECCCcceeecccCccc-----------------------------------------------------
Confidence 999999999999999998653211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 157 ------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~ 200 (256)
T cd05112 157 ------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKT 200 (256)
T ss_pred ------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCC
Confidence 0001134567999999988889999999999999999997
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||..... ......+.....+......+..+.+|+.+||..+|++||++.++++.
T Consensus 201 p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 201 PYENRSN-SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred CCCcCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 6644332 23333333322222222345778899999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >KOG0294 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.94 E-value=9e-25 Score=217.52 Aligned_cols=242 Identities=17% Similarity=0.309 Sum_probs=205.0
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCC-CCCeEEEeeCCCcE
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSY-IKSQIASSNFEGVV 642 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~-~~~~l~s~~~dg~V 642 (879)
+..|.+.|++++.+ |.++|+||.|-+|+|||+....... ....|.+.|+++.|.+. ..++|++|+.||.|
T Consensus 39 ~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg-------~ll~HagsitaL~F~~~~S~shLlS~sdDG~i 109 (362)
T KOG0294|consen 39 FSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLG-------ILLSHAGSITALKFYPPLSKSHLLSGSDDGHI 109 (362)
T ss_pred ccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhc-------ceeccccceEEEEecCCcchhheeeecCCCcE
Confidence 45799999999996 8899999999999999998632211 22458899999999763 24599999999999
Q ss_pred EEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEe
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 643 ~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs 722 (879)
.+|+.....++..++.|.+.|+.++.+| .+++.++.+.|+.+++||+-.|+.-.....+...+.|.|+|. |.+++.++
T Consensus 110 ~iw~~~~W~~~~slK~H~~~Vt~lsiHP-S~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~-Gd~F~v~~ 187 (362)
T KOG0294|consen 110 IIWRVGSWELLKSLKAHKGQVTDLSIHP-SGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQ-GDHFVVSG 187 (362)
T ss_pred EEEEcCCeEEeeeecccccccceeEecC-CCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCC-CCEEEEEe
Confidence 9999999999999999999999999999 999999999999999999999987776666666677999999 77777766
Q ss_pred CCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEE-
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGL- 801 (879)
Q Consensus 723 ~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~- 801 (879)
.+ .|-+|.+.+... .........+.++.|.++.+|++|..|+.|++||..+. .+...+.+|.+.|-.+.+
T Consensus 188 ~~-~i~i~q~d~A~v--~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~------~~~~~~~AH~~RVK~i~~~ 258 (362)
T KOG0294|consen 188 RN-KIDIYQLDNASV--FREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSD------TPLTEFLAHENRVKDIASY 258 (362)
T ss_pred cc-EEEEEecccHhH--hhhhhccccceeeeecCCceEEEecCCceEEEeccCCC------ccceeeecchhheeeeEEE
Confidence 54 588999887762 22222336688999999999999999999999999985 789999999999998874
Q ss_pred -ecCCCEEEEEeCCCcEEEEecCCC
Q 002801 802 -SVWDGYVATGSETNEVFVYHKAFP 825 (879)
Q Consensus 802 -sp~~~~lasgs~Dg~v~vw~~~~~ 825 (879)
.|++.||+|+|.||.|+|||++..
T Consensus 259 ~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 259 TNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ecCCceEEEEeccCceEEEEEcccc
Confidence 455779999999999999999865
|
|
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.8e-27 Score=227.85 Aligned_cols=192 Identities=15% Similarity=0.215 Sum_probs=150.3
Q ss_pred cCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCC
Q 002801 54 IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 133 (879)
Q Consensus 54 ~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~ 133 (879)
..+|+|+.+| ..+|.-+|.....+++..++..++.+++.||.|+|...|+|||+||+|+||+.+|.+||+|||+++.+.
T Consensus 97 ~t~ylVf~~c-ehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs 175 (376)
T KOG0669|consen 97 ATFYLVFDFC-EHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFS 175 (376)
T ss_pred ceeeeeHHHh-hhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccccccee
Confidence 3589999999 458999997766789999999999999999999999999999999999999999999999999997753
Q ss_pred CCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeecccccccccccccc
Q 002801 134 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 213 (879)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 213 (879)
...-.
T Consensus 176 ~~~n~--------------------------------------------------------------------------- 180 (376)
T KOG0669|consen 176 TSKNV--------------------------------------------------------------------------- 180 (376)
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 22110
Q ss_pred chhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--CCCCChhhHhHHhh---hcccCC
Q 002801 214 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSS---LRHRVL 287 (879)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~--pf~~~~~~~~~~~~---~~~~~~ 287 (879)
.+.+.+..+-|.||++||.+.|.. |+++.|||..|||+.||.+ |...+......... +....-
T Consensus 181 -----------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 181 -----------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred -----------CCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 000224457799999999999866 9999999999999999999 77665544433322 222211
Q ss_pred Cchh-------------------------------hccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCCcCch
Q 002801 288 PPQL-------------------------------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 288 ~~~~-------------------------------~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~~~~~ 332 (879)
+..| ....+.+.+|+.++|..||.+||.+.+++.|.||..-..+.
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~pq 325 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMPQ 325 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcch
Confidence 1110 01123578999999999999999999999999998755553
|
|
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=247.98 Aligned_cols=200 Identities=18% Similarity=0.186 Sum_probs=155.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+.+.+|++++..++ .+.+ ....+++|||+.+++|..++. .....+++.+++.++.|++.||.|||++||+|+|
T Consensus 55 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~ 131 (260)
T cd08222 55 LLSKLDHPAIVKFHA-SFLE--RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRD 131 (260)
T ss_pred HHHhCCCCcHHHHHH-HHhc--CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccC
Confidence 445667888887776 3433 335799999999999998884 2345789999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++. +.++++|||+++.......
T Consensus 132 l~~~nili~~-~~~~l~d~g~~~~~~~~~~-------------------------------------------------- 160 (260)
T cd08222 132 LKAKNIFLKN-NLLKIGDFGVSRLLMGSCD-------------------------------------------------- 160 (260)
T ss_pred CChhheEeec-CCEeecccCceeecCCCcc--------------------------------------------------
Confidence 9999999974 6799999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......|++.|+|||.+.+..++.++|+||||+++|+|++
T Consensus 161 ----------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~ 200 (260)
T cd08222 161 ----------------------------------------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC 200 (260)
T ss_pred ----------------------------------------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHh
Confidence 0011356888999999988889999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..... ......+.....+......+..+.+++.+||..+|++||++.++++||||
T Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 201 LAHAFEGQNF-LSVVLRIVEGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CCCCCCCccH-HHHHHHHHcCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 6644333 23333333333444444566788999999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.5e-26 Score=244.69 Aligned_cols=199 Identities=18% Similarity=0.226 Sum_probs=157.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+.+..|++++..+. .+.+ ....|++|||+++++|.+++... ..+++..+..++.|++.||.|||+.||+|+||||+
T Consensus 53 l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ 128 (254)
T cd06627 53 LKNLKHPNIVKYIG-SIET--SDSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAA 128 (254)
T ss_pred HHhCCCCCccEEEE-EEEe--CCEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHH
Confidence 34456777666555 3333 35689999999999999999655 57899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++|+|||.+.........
T Consensus 129 ni~i~~~~~~~l~d~~~~~~~~~~~~~----------------------------------------------------- 155 (254)
T cd06627 129 NILTTKDGVVKLADFGVATKLNDVSKD----------------------------------------------------- 155 (254)
T ss_pred HEEECCCCCEEEeccccceecCCCccc-----------------------------------------------------
Confidence 999999999999999998664211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
.....|+..|+|||.+.+..++.++||||||+++|+|++ |
T Consensus 156 -------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p 198 (254)
T cd06627 156 -------------------------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPP 198 (254)
T ss_pred -------------------------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCC
Confidence 011356888999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
|........ +........++......+.+.+++.+||..+|++||++.+++.||||
T Consensus 199 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 199 YYDLNPMAA-LFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CCCccHHHH-HHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 755443222 22222333344444566788999999999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-26 Score=246.44 Aligned_cols=201 Identities=13% Similarity=0.147 Sum_probs=152.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|+|++..++ .+. .....|++|||+++++|.++++...+.+++.+++.++.|++.||+|||++||+|+||||+
T Consensus 59 l~~l~h~ni~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~ 135 (269)
T cd05065 59 MGQFDHPNIIHLEG-VVT--KSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAAR 135 (269)
T ss_pred HHhCCCcCcceEEE-EEC--CCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChh
Confidence 44567888877666 443 234579999999999999999766567899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||+++...........
T Consensus 136 nili~~~~~~kl~dfg~~~~~~~~~~~~~~-------------------------------------------------- 165 (269)
T cd05065 136 NILVNSNLVCKVSDFGLSRFLEDDTSDPTY-------------------------------------------------- 165 (269)
T ss_pred eEEEcCCCcEEECCCccccccccCcccccc--------------------------------------------------
Confidence 999999999999999998653211000000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---- 267 (879)
. .......+..|+|||.+.+..++.++|||||||++|||++
T Consensus 166 ----------------------------------~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~ 210 (269)
T cd05065 166 ----------------------------------T-SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 210 (269)
T ss_pred ----------------------------------c-cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCC
Confidence 0 0000112457999999998889999999999999999875
Q ss_pred CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+......+.....++.+.+++.+||..+|.+||++.+++.
T Consensus 211 p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 211 PYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 77544333 222233333333334456678899999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=251.62 Aligned_cols=200 Identities=16% Similarity=0.133 Sum_probs=148.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-----------CCCChhHHHHHHHHHHHHHHhhh
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-----------RSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-----------~~l~~~~~~~i~~qi~~~l~~lH 99 (879)
.+...+|++++..++ .+.. ....|++|||+.+++|.+++.... ..+++..++.++.||+.||.|||
T Consensus 70 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 146 (295)
T cd05097 70 IMSRLKNPNIIRLLG-VCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA 146 (295)
T ss_pred HHHhCCCCCcCeEEE-EEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence 345567888877776 4432 346899999999999999984321 23688899999999999999999
Q ss_pred hcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCc
Q 002801 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 100 s~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
++||+||||||+||+++.++.+|++|||++.........
T Consensus 147 ~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------- 185 (295)
T cd05097 147 SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYY----------------------------------------- 185 (295)
T ss_pred hcCeeccccChhhEEEcCCCcEEecccccccccccCcce-----------------------------------------
Confidence 999999999999999999999999999998653111000
Q ss_pred ccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHH
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (879)
.......++..|+|||++.+..++.++||||||
T Consensus 186 -----------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG 218 (295)
T cd05097 186 -----------------------------------------------RIQGRAVLPIRWMAWESILLGKFTTASDVWAFG 218 (295)
T ss_pred -----------------------------------------------eccCcCcCceeecChhhhccCCcCchhhHHHHH
Confidence 000112456789999999888899999999999
Q ss_pred HHHHHhhc-----CCCCChhhHhHHhh---hc---ccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 260 VLLFELFC-----PFSTGEEKTRTMSS---LR---HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 260 vil~ell~-----pf~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|++|||++ ||............ .. ...........++.+.+|+.+||..+|.+||++.+|++
T Consensus 219 ~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 219 VTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred HHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99999987 66443322211111 01 11112223345678999999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=249.87 Aligned_cols=200 Identities=19% Similarity=0.226 Sum_probs=150.1
Q ss_pred eecccc-cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccC
Q 002801 31 ELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 108 (879)
Q Consensus 31 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDl 108 (879)
.+.... |++++..++ .+.+ ....|++|||+ +++|.+++.... ..+++.+++.++.||+.+|.|||++||+|+||
T Consensus 50 ~l~~~~~h~~i~~~~~-~~~~--~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl 125 (283)
T cd07830 50 SLRKLNEHPNIVKLKE-VFRE--NDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDL 125 (283)
T ss_pred HHHhccCCCCchhHHH-Hhhc--CCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCC
Confidence 344445 788777666 4544 55789999999 889999885543 47899999999999999999999999999999
Q ss_pred CCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 109 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 109 KP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
||+||+++.++.++++|||+++......
T Consensus 126 ~~~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------------------------- 153 (283)
T cd07830 126 KPENLLVSGPEVVKIADFGLAREIRSRP---------------------------------------------------- 153 (283)
T ss_pred ChhhEEEcCCCCEEEeecccceeccCCC----------------------------------------------------
Confidence 9999999999999999999986531110
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||++.+ ..++.++|||||||++|||++
T Consensus 154 ---------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~ 194 (283)
T cd07830 154 ---------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYT 194 (283)
T ss_pred ---------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHh
Confidence 0012367889999998865 448999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhc--c------------------cCC--------CchhhccChhhHHHHHHhcCCCCCCCCCH
Q 002801 268 ---PFSTGEEKTRTMSSLR--H------------------RVL--------PPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~--~------------------~~~--------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
||.............. . ... ........+.+.++|.+||..+|++|||+
T Consensus 195 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~ 274 (283)
T cd07830 195 LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTA 274 (283)
T ss_pred CCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCH
Confidence 5543322221111100 0 000 01111234678899999999999999999
Q ss_pred HHHhhcccc
Q 002801 317 GELLQSEFL 325 (879)
Q Consensus 317 ~evl~hp~~ 325 (879)
.|++.||||
T Consensus 275 ~ei~~~~~~ 283 (283)
T cd07830 275 SQALQHPYF 283 (283)
T ss_pred HHHhhCCCC
Confidence 999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=246.08 Aligned_cols=197 Identities=13% Similarity=0.116 Sum_probs=151.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ +.. ....|++|||+.+++|.+++.. ....+++.+++.++.||+.||+|||+.||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~---~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~ 129 (260)
T cd05067 54 LMKQLQHPRLVRLYA-VVT---QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLR 129 (260)
T ss_pred HHHhcCCcCeeeEEE-EEc---cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeeccccc
Confidence 344557888877666 332 2358999999999999999854 33568999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.++++|||++.........
T Consensus 130 p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------- 158 (260)
T cd05067 130 AANILVSETLCCKIADFGLARLIEDNEYT--------------------------------------------------- 158 (260)
T ss_pred HHhEEEcCCCCEEEccCcceeecCCCCcc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g 200 (260)
T cd05067 159 --------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYG 200 (260)
T ss_pred --------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCC
Confidence 0011244677999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+.....++.....+..+.+++.+||..+|++||++++++.
T Consensus 201 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 201 RIPYPGMT-NPEVIQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred CCCCCCCC-hHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 664433 23333333333333444455678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-26 Score=249.53 Aligned_cols=199 Identities=15% Similarity=0.129 Sum_probs=152.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC-----------------------CCCCChhHHHHH
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----------------------KRSVDVYECLHI 87 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~-----------------------~~~l~~~~~~~i 87 (879)
.+...+|++++..++ .|.. ....|++|||+.+++|.+++... ...+++..++.+
T Consensus 56 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 132 (290)
T cd05045 56 LLKQVNHPHVIKLYG-ACSQ--DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISF 132 (290)
T ss_pred HHhhCCCCCEeeEEE-EEec--CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHH
Confidence 345567888887666 4433 34589999999999999987431 135788999999
Q ss_pred HHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhcc
Q 002801 88 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 167 (879)
Q Consensus 88 ~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (879)
+.||+.||.|||++||+||||||+|||++.++.+|++|||+++........
T Consensus 133 ~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~----------------------------- 183 (290)
T cd05045 133 AWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY----------------------------- 183 (290)
T ss_pred HHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccch-----------------------------
Confidence 999999999999999999999999999999999999999998653111000
Q ss_pred ccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC
Q 002801 168 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 247 (879)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~ 247 (879)
.......++..|+|||.+.+.
T Consensus 184 -----------------------------------------------------------~~~~~~~~~~~y~apE~~~~~ 204 (290)
T cd05045 184 -----------------------------------------------------------VKRSKGRIPVKWMAIESLFDH 204 (290)
T ss_pred -----------------------------------------------------------hcccCCCCCccccCHHHHccC
Confidence 000112446679999999888
Q ss_pred CCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 248 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 248 ~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
.++.++|||||||++|||++ ||... ........+.....++.....+..+.+++.+||+.+|.+||++.++++
T Consensus 205 ~~~~~~Di~slG~~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 205 IYTTQSDVWSFGVLLWEIVTLGGNPYPGI-APERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CcchHhHHHHHHHHHHHHHhcCCCCCCCC-CHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 89999999999999999997 66433 333334444443333444556678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=257.42 Aligned_cols=206 Identities=17% Similarity=0.227 Sum_probs=152.4
Q ss_pred eecccccccCCCCCCcccccc----cccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
.+.+.+|++++..++ ++... .....|++++++ |++|.++++.. .+++..++.++.||+.||+|||++||+||
T Consensus 69 ~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 144 (345)
T cd07877 69 LLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHR 144 (345)
T ss_pred HHHHcCCCcccceee-eeeecccccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 445567888877666 44321 123467788776 88999988543 58999999999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||+||+++.++.+|++|||+++.....
T Consensus 145 dlkp~NIll~~~~~~kl~dfg~~~~~~~~--------------------------------------------------- 173 (345)
T cd07877 145 DLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------------------- 173 (345)
T ss_pred CCChHHEEEcCCCCEEEeccccccccccc---------------------------------------------------
Confidence 99999999999999999999998642110
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHh
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~el 265 (879)
.....|+.+|+|||.+.+ ..++.++|||||||++|||
T Consensus 174 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el 211 (345)
T cd07877 174 ------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 211 (345)
T ss_pred ------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHH
Confidence 012367889999999876 4589999999999999999
Q ss_pred hc---CCCCChhhHhHHhhhc--cc----------------------CCC-----chhhccChhhHHHHHHhcCCCCCCC
Q 002801 266 FC---PFSTGEEKTRTMSSLR--HR----------------------VLP-----PQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 266 l~---pf~~~~~~~~~~~~~~--~~----------------------~~~-----~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
++ ||............+. .. ..+ ......++.+.+||.+||++||.+|
T Consensus 212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 291 (345)
T cd07877 212 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 291 (345)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhc
Confidence 98 6643322111111100 00 000 0112345678899999999999999
Q ss_pred CCHHHHhhcccccCCcCchH
Q 002801 314 PKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 314 pt~~evl~hp~~~~~~~~~~ 333 (879)
|++.+++.||||.....+..
T Consensus 292 ~t~~e~l~h~~f~~~~~~~~ 311 (345)
T cd07877 292 ITAAQALAHAYFAQYHDPDD 311 (345)
T ss_pred CCHHHHhcChhhhhcCCCCc
Confidence 99999999999987554443
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=260.66 Aligned_cols=157 Identities=13% Similarity=0.138 Sum_probs=121.8
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcc
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
.+++..++.|+.||+.||+|||++||+||||||+|||++..+.+|++|||+++........
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~------------------- 295 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY------------------- 295 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccccc-------------------
Confidence 3567788999999999999999999999999999999999999999999998653111000
Q ss_pred hhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccc
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
.......++..
T Consensus 296 ---------------------------------------------------------------------~~~~~~~~~~~ 306 (401)
T cd05107 296 ---------------------------------------------------------------------ISKGSTFLPLK 306 (401)
T ss_pred ---------------------------------------------------------------------ccCCCcCCCCc
Confidence 00011256788
Q ss_pred eeccccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCC
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 238 Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
|+|||.+.+..++.++|||||||+||||++ ||............+.....++.+...+..+.+|+.+||..+|.+|
T Consensus 307 y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~R 386 (401)
T cd05107 307 WMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIR 386 (401)
T ss_pred eeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHC
Confidence 999999988889999999999999999996 6654433333333333333333444567889999999999999999
Q ss_pred CCHHHHhhc
Q 002801 314 PKMGELLQS 322 (879)
Q Consensus 314 pt~~evl~h 322 (879)
|++.++++.
T Consensus 387 Ps~~ell~~ 395 (401)
T cd05107 387 PDFSQLVHL 395 (401)
T ss_pred cCHHHHHHH
Confidence 999999863
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=250.76 Aligned_cols=200 Identities=15% Similarity=0.088 Sum_probs=152.4
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC---------------------CCCCChhHHHHHH
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------------KRSVDVYECLHIF 88 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~---------------------~~~l~~~~~~~i~ 88 (879)
..+...+|++++..++ +|.+ ....|++|||+.+++|.+++... ...+++.+++.++
T Consensus 60 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (288)
T cd05050 60 ALMAEFDHPNIVKLLG-VCAV--GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIA 136 (288)
T ss_pred HHHHhcCCCchheEEE-EEcC--CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHH
Confidence 3455667888887766 5544 34679999999999999998532 1247888999999
Q ss_pred HHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccc
Q 002801 89 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 168 (879)
Q Consensus 89 ~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (879)
.||+.||+|||++||+||||||+||+++.++.++++|||+++.........
T Consensus 137 ~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~----------------------------- 187 (288)
T cd05050 137 KQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK----------------------------- 187 (288)
T ss_pred HHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcccc-----------------------------
Confidence 999999999999999999999999999999999999999986532110000
Q ss_pred cccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC
Q 002801 169 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 248 (879)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 248 (879)
.......+..|+|||.+.+..
T Consensus 188 -----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 208 (288)
T cd05050 188 -----------------------------------------------------------ASENDAIPIRWMPPESIFYNR 208 (288)
T ss_pred -----------------------------------------------------------ccCCCccChhhcCHHHHhcCC
Confidence 000113356699999998888
Q ss_pred CCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 249 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 249 ~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++.++|||||||++|||++ ||...... .....+.....++.....+..+.+|+.+||..+|.+|||+.|+++
T Consensus 209 ~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 209 YTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR 284 (288)
T ss_pred CCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9999999999999999986 66544332 333334444333334456678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-23 Score=199.92 Aligned_cols=293 Identities=17% Similarity=0.272 Sum_probs=230.2
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCc---Cccccc-ceE----EeccCCCeeEEEEeCCCCCeEEEee
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE---NRDIHY-PVV----EMASRSKLSSICWNSYIKSQIASSN 637 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~---~~~~~~-~~~----~~~~~~~i~~l~~~~~~~~~l~s~~ 637 (879)
..+..|.+++|+|.|.+.|.|+..++++|-.+...... .....+ |.+ ...|++.|.|.+|+|. +++|++|+
T Consensus 30 ~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~-geliatgs 108 (350)
T KOG0641|consen 30 EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC-GELIATGS 108 (350)
T ss_pred cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc-cCeEEecC
Confidence 44678999999999999999999999999877653322 111112 222 2358899999999995 99999999
Q ss_pred CCCcEEEEEcCCCeE-----EEEeccCCCcEEEEEEec---CCCCEEEEEe-CCCcEEEEeCCCCceEEEEecCC-ceEE
Q 002801 638 FEGVVQVWDVSRSQV-----LTEMREHERRVWSIDFSS---ADPTLLASGS-DDGSVKLWSINQGVSIGTIKTKA-NVCC 707 (879)
Q Consensus 638 ~dg~V~vwd~~~~~~-----~~~~~~h~~~v~sv~~sp---~~~~~lasgs-~Dg~V~iwd~~~~~~i~~~~~~~-~v~~ 707 (879)
.|.+|++.-.+...+ -.++.-|.+.|..++|-. ..+.+|++++ .|+.|++-|...|+...-+..+. .|.+
T Consensus 109 ndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghila 188 (350)
T KOG0641|consen 109 NDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILA 188 (350)
T ss_pred CCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEE
Confidence 999999986654322 245677999999999964 1245677754 57889999999999988887554 4544
Q ss_pred EEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc--C-----CCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcc
Q 002801 708 VQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG--H-----NKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTS 779 (879)
Q Consensus 708 v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~--h-----~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~ 779 (879)
+ ++ +++..+++|+.|.+|++||+|-... +.++.. | .++|.+|+.. .|.+|++|-.|....+||++.+
T Consensus 189 l-ys-wn~~m~~sgsqdktirfwdlrv~~~-v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~-- 263 (350)
T KOG0641|consen 189 L-YS-WNGAMFASGSQDKTIRFWDLRVNSC-VNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGG-- 263 (350)
T ss_pred E-EE-ecCcEEEccCCCceEEEEeeeccce-eeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCC--
Confidence 4 22 2378999999999999999998763 655532 2 3679999998 9999999999999999999987
Q ss_pred cccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCC
Q 002801 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQ 859 (879)
Q Consensus 780 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~ 859 (879)
++++.|-.|+..|.+|.|||...|+.+||.|..|++-|+...- ...+ +......|...+-.+.|+|+
T Consensus 264 ----r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdl-a~el--------~~~vv~ehkdk~i~~rwh~~ 330 (350)
T KOG0641|consen 264 ----RMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDL-AHEL--------PIMVVAEHKDKAIQCRWHPQ 330 (350)
T ss_pred ----ceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccch-hhcC--------ceEEEEeccCceEEEEecCc
Confidence 8899999999999999999999999999999999999986421 1000 01112568888999999999
Q ss_pred CCcEEEEEeCCCcEEEEEe
Q 002801 860 SSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 860 ~~~~l~s~~~Dg~I~vw~l 878 (879)
.- .+++.+.|.++.+|-+
T Consensus 331 d~-sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 331 DF-SFISSSADKTATLWAL 348 (350)
T ss_pred cc-eeeeccCcceEEEecc
Confidence 87 8999999999999965
|
|
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-26 Score=247.79 Aligned_cols=199 Identities=13% Similarity=0.117 Sum_probs=144.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC----CCCChhHHHHHHHHHHHHHHhhhhcCcccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHSQGIVVH 106 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----~~l~~~~~~~i~~qi~~~l~~lHs~givHr 106 (879)
.+...+|+|++..++ .|.+ ....|++|||+.+++|.++|.... ...++..++.++.||+.||+|||++||+||
T Consensus 48 ~~~~l~h~nii~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~ 124 (269)
T cd05042 48 PYRELNHPNVLQCLG-QCIE--SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHS 124 (269)
T ss_pred HHHhCCCCCcceEEE-EECC--CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecc
Confidence 344567888888776 5543 346899999999999999995432 234677889999999999999999999999
Q ss_pred cCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 107 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 107 DlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||+|||++.++.+|++|||+++........
T Consensus 125 dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------------------------------------------ 156 (269)
T cd05042 125 DLALRNCQLTADLSVKIGDYGLALEQYPEDYY------------------------------------------------ 156 (269)
T ss_pred cccHhheEecCCCcEEEeccccccccccchhe------------------------------------------------
Confidence 99999999999999999999998652111000
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-------CCCCccCcchhHH
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDIYRLG 259 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDIwSlG 259 (879)
.......++..|+|||++.. ..++.++||||||
T Consensus 157 ----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG 196 (269)
T cd05042 157 ----------------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLG 196 (269)
T ss_pred ----------------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHH
Confidence 00011245677999998743 3478899999999
Q ss_pred HHHHHhhc----CCCCChhhHhHHhhhcccCC----CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVL----PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 260 vil~ell~----pf~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|++|||++ ||............+..... +......++....++..|+ .||++|||+++|++
T Consensus 197 ~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 197 VTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 99999997 56544433333332322211 1122234566778888888 59999999999875
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.8e-24 Score=236.58 Aligned_cols=264 Identities=17% Similarity=0.239 Sum_probs=227.6
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+.+...+.+++|+.+++++.+++.. +.+.+..|-|.++++++|...|.+.+||+.+...-... ..|
T Consensus 388 ~~Sga~~SikiWn~~t~kciRTi~~-------~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti-------~AH 453 (888)
T KOG0306|consen 388 LASGAGESIKIWNRDTLKCIRTITC-------GYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETI-------RAH 453 (888)
T ss_pred eeecCCCcEEEEEccCcceeEEecc-------ccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhh-------hcc
Confidence 4445577999999999999998764 37889999999999999999999999999874332211 258
Q ss_pred CCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC-----Ce--EEEEec-----cCCCcEEEEEEecCCCCEEEEEeCCCc
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-----SQ--VLTEMR-----EHERRVWSIDFSSADPTLLASGSDDGS 684 (879)
Q Consensus 617 ~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~-----~~--~~~~~~-----~h~~~v~sv~~sp~~~~~lasgs~Dg~ 684 (879)
.+.|++++..|. +..+++|+.|.+|++||..- +. .+..+. +-+..|.|+.+|| |+.+||.+--|.+
T Consensus 454 dgaIWsi~~~pD-~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Sp-dgk~LaVsLLdnT 531 (888)
T KOG0306|consen 454 DGAIWSISLSPD-NKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSP-DGKLLAVSLLDNT 531 (888)
T ss_pred ccceeeeeecCC-CCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcC-CCcEEEEEeccCe
Confidence 999999999995 88999999999999999631 11 111111 2356899999999 9999999999999
Q ss_pred EEEEeCCCCceEEEEe-cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEE
Q 002801 685 VKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVS 762 (879)
Q Consensus 685 V~iwd~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s 762 (879)
|+||-+.+-+-..++. |+-+|.|+..+|+ +++++|||+|.+|++|-+.-+.+ ...+.+|...|.+|.|. ....+.|
T Consensus 532 VkVyflDtlKFflsLYGHkLPV~smDIS~D-SklivTgSADKnVKiWGLdFGDC-HKS~fAHdDSvm~V~F~P~~~~FFt 609 (888)
T KOG0306|consen 532 VKVYFLDTLKFFLSLYGHKLPVLSMDISPD-SKLIVTGSADKNVKIWGLDFGDC-HKSFFAHDDSVMSVQFLPKTHLFFT 609 (888)
T ss_pred EEEEEecceeeeeeecccccceeEEeccCC-cCeEEeccCCCceEEeccccchh-hhhhhcccCceeEEEEcccceeEEE
Confidence 9999999988766665 5678999999999 89999999999999999998884 78888999999999998 7788999
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCC
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~ 824 (879)
+|.|+.|+-||-... ..+..+.+|...|++++.+|+|.|++++|.|.+|++|....
T Consensus 610 ~gKD~kvKqWDg~kF------e~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKF------EEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred ecCcceEEeechhhh------hhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccC
Confidence 999999999999886 78999999999999999999999999999999999998764
|
|
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.7e-26 Score=244.96 Aligned_cols=195 Identities=19% Similarity=0.222 Sum_probs=152.4
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCC-CChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~-l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
..+|++++..+. .+.+. ...|++|||+.+++|.+++...... +++..++.++.||+.||+|||+.||+|+||||+|
T Consensus 57 ~l~~~~i~~~~~-~~~~~--~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~n 133 (258)
T smart00219 57 KLDHPNIVKLLG-VCTEE--EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARN 133 (258)
T ss_pred hcCCCchheEEE-EEcCC--CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccce
Confidence 347778877776 44433 4689999999999999999654333 8999999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
|+++.++.++++|||+++........
T Consensus 134 il~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------------------ 159 (258)
T smart00219 134 CLVGENLVVKISDFGLSRDLYDDDYY------------------------------------------------------ 159 (258)
T ss_pred EEEccCCeEEEcccCCceeccccccc------------------------------------------------------
Confidence 99999999999999998664211000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc----C
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----P 268 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~----p 268 (879)
......+++.|+|||.+.+..++.++|||||||++|||++ |
T Consensus 160 -----------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p 204 (258)
T smart00219 160 -----------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESP 204 (258)
T ss_pred -----------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCC
Confidence 0000125778999999988889999999999999999987 5
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|.. .........+.....++.....+..+.+++.+||..+|.+|||+.++++
T Consensus 205 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 205 YPG-MSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred CCC-CCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 533 3333334444444444444456788999999999999999999999976
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.3e-26 Score=248.14 Aligned_cols=203 Identities=18% Similarity=0.197 Sum_probs=151.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..++ ++.+......|++|||+++ +|.+++......+++.+++.++.||+.||+|||++|++|+||||+
T Consensus 52 l~~l~~~~i~~~~~-~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~ 129 (287)
T cd07840 52 LQKLRHPNIVRLKE-IVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGS 129 (287)
T ss_pred HHhccCCCeeehee-eEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHH
Confidence 34445777777666 4544324578999999975 899998665567999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.+|++|||++.........
T Consensus 130 nil~~~~~~~~l~d~g~~~~~~~~~~~----------------------------------------------------- 156 (287)
T cd07840 130 NILINNDGVLKLADFGLARPYTKRNSA----------------------------------------------------- 156 (287)
T ss_pred HeEEcCCCCEEEccccceeeccCCCcc-----------------------------------------------------
Confidence 999999999999999998654211000
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~--- 267 (879)
..+...++..|+|||.+.+. .++.++|||||||++|||++
T Consensus 157 ------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~ 200 (287)
T cd07840 157 ------------------------------------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKP 200 (287)
T ss_pred ------------------------------------cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCC
Confidence 00113567889999987754 58999999999999999999
Q ss_pred CCCCChhhHhHHhhhcc--c----------------------CCC----chhhc-cChhhHHHHHHhcCCCCCCCCCHHH
Q 002801 268 PFSTGEEKTRTMSSLRH--R----------------------VLP----PQLLL-KFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~~--~----------------------~~~----~~~~~-~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
||............... . ..+ ..... .++.+.+++.+||..+|.+||++.+
T Consensus 201 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 280 (287)
T cd07840 201 IFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQ 280 (287)
T ss_pred CCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 66544322211111000 0 000 01112 2667889999999999999999999
Q ss_pred Hhhcccc
Q 002801 319 LLQSEFL 325 (879)
Q Consensus 319 vl~hp~~ 325 (879)
+++||||
T Consensus 281 ~l~~~~~ 287 (287)
T cd07840 281 ALQHEYF 287 (287)
T ss_pred HhhCcCC
Confidence 9999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=245.09 Aligned_cols=198 Identities=20% Similarity=0.228 Sum_probs=153.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++..+. .+.+ ....|++|||++|++|.+++.. ....+++..++.++.||+.||.|||+.||+|+|
T Consensus 55 ~l~~~~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~d 131 (267)
T cd08224 55 LLKQLDHPNVIKYLA-SFIE--NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRD 131 (267)
T ss_pred HHHhCCCCCeeeeee-eeec--CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 345567777777766 3333 3467999999999999998842 345689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.++++|||+++.......
T Consensus 132 l~p~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------------- 161 (267)
T cd08224 132 IKPANVFITATGVVKLGDLGLGRFFSSKTT-------------------------------------------------- 161 (267)
T ss_pred cChhhEEECCCCcEEEeccceeeeccCCCc--------------------------------------------------
Confidence 999999999999999999999865311100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 ----------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~ 201 (267)
T cd08224 162 ----------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred ----------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHH
Confidence 0011357888999999998889999999999999999999
Q ss_pred ---CCCCChh-hHhHHhhhcccCCCchhh-ccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 ---PFSTGEE-KTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 ---pf~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... .......+.....++.+. ..+..+.++|.+||..+|++||++.++++
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 202 LQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred CCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 7744332 222333444444444433 45567889999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-26 Score=247.76 Aligned_cols=201 Identities=14% Similarity=0.097 Sum_probs=154.6
Q ss_pred CceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 28 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
+...+...+|++++..++ .|.. ...+++|||+.+++|.+++......+++..+..++.||+.||+|||++||+|||
T Consensus 59 e~~~l~~l~h~~i~~~~~-~~~~---~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~d 134 (279)
T cd05057 59 EAYVMASVDHPHVVRLLG-ICLS---SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRD 134 (279)
T ss_pred HHHHHHhCCCCCcceEEE-EEec---CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecc
Confidence 333455567888877776 5554 578999999999999999977666799999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.+|++|||+++........ .
T Consensus 135 i~p~nil~~~~~~~kL~dfg~~~~~~~~~~~--~---------------------------------------------- 166 (279)
T cd05057 135 LAARNVLVKTPQHVKITDFGLAKLLDVDEKE--Y---------------------------------------------- 166 (279)
T ss_pred cCcceEEEcCCCeEEECCCcccccccCcccc--e----------------------------------------------
Confidence 9999999999999999999999764211000 0
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......++..|+|||.+....++.++|||||||++|||++
T Consensus 167 ----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~ 206 (279)
T cd05057 167 ----------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMT 206 (279)
T ss_pred ----------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhc
Confidence 0000123557999999988889999999999999999986
Q ss_pred ----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 ----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 ----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... .....+......+.+......+.+++.+||..+|.+||++.++++
T Consensus 207 ~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 207 FGAKPYEGIPAV-EIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred CCCCCCCCCCHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 66544332 223333333333334445678889999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-26 Score=244.00 Aligned_cols=197 Identities=12% Similarity=0.105 Sum_probs=152.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+.+ ...|++|||+.+++|.+++.+ ....+++..++.++.||+.||.|||+.||+|+|||
T Consensus 54 ~l~~l~~~~i~~~~~-~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~ 129 (260)
T cd05073 54 VMKTLQHDKLVKLHA-VVTK---EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 129 (260)
T ss_pred HHHhcCCCCcceEEE-EEcC---CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence 345567888877766 3333 467999999999999999954 33467889999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++..+.+|++|||.+.........
T Consensus 130 p~ni~i~~~~~~~l~d~~~~~~~~~~~~~--------------------------------------------------- 158 (260)
T cd05073 130 AANILVSASLVCKIADFGLARVIEDNEYT--------------------------------------------------- 158 (260)
T ss_pred cceEEEcCCCcEEECCCcceeeccCCCcc---------------------------------------------------
Confidence 99999999999999999998653211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||++.+..++.++|||||||++|||++
T Consensus 159 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g 200 (260)
T cd05073 159 --------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYG 200 (260)
T ss_pred --------------------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcC
Confidence 0011234567999999988889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||.... .......+......+.....+..+.+++.+||+.+|++||++.+++.
T Consensus 201 ~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 201 RIPYPGMS-NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred CCCCCCCC-HHHHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 665433 23333334444333444556678899999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-26 Score=250.77 Aligned_cols=204 Identities=17% Similarity=0.179 Sum_probs=150.4
Q ss_pred eecccccccCCCCCCccccccc--------ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA--------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
.+.+.+|++++..++ ++.++. ....|++|||+++ +|..++......+++.+++.++.||+.||.|||+.|
T Consensus 59 ~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 136 (302)
T cd07864 59 ILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKN 136 (302)
T ss_pred HHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 344567888877666 444332 3368999999976 777777555557899999999999999999999999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+|+||||+||+++.++.+||+|||++.........
T Consensus 137 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~-------------------------------------------- 172 (302)
T cd07864 137 FLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESR-------------------------------------------- 172 (302)
T ss_pred eecCCCCHHHEEECCCCcEEeCcccccccccCCccc--------------------------------------------
Confidence 999999999999999999999999998654211000
Q ss_pred cccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHH
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 261 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvi 261 (879)
......++..|+|||.+.+. .++.++|||||||+
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~ 207 (302)
T cd07864 173 ---------------------------------------------PYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCI 207 (302)
T ss_pred ---------------------------------------------ccccceeccCccChHHhcCCCCCCchhHHHHHHHH
Confidence 00112457789999988754 47899999999999
Q ss_pred HHHhhc---CCCCChhhHhHHh--hhcccCCC--------------------------chhhccChhhHHHHHHhcCCCC
Q 002801 262 LFELFC---PFSTGEEKTRTMS--SLRHRVLP--------------------------PQLLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 262 l~ell~---pf~~~~~~~~~~~--~~~~~~~~--------------------------~~~~~~~~~~~~li~~~L~~dP 310 (879)
+|||++ ||........... .......+ ..+...++.+.+++.+||..+|
T Consensus 208 ~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 287 (302)
T cd07864 208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDP 287 (302)
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCCh
Confidence 999999 5644332221111 11111000 1122346778899999999999
Q ss_pred CCCCCHHHHhhcccc
Q 002801 311 SGRPKMGELLQSEFL 325 (879)
Q Consensus 311 ~~Rpt~~evl~hp~~ 325 (879)
.+||++.+++.||||
T Consensus 288 ~~Rp~~~~il~~~~~ 302 (302)
T cd07864 288 SKRCTAEEALNSPWL 302 (302)
T ss_pred hhCCCHHHHhcCCCC
Confidence 999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-26 Score=242.95 Aligned_cols=199 Identities=20% Similarity=0.215 Sum_probs=157.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++..++ .+.+ ....|++|||+++++|.+++.+ ....+++..++.++.|++.||+|||+.||+|+|
T Consensus 52 ~l~~l~~~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~ 128 (256)
T cd08530 52 ILASVNHPNIISYKE-AFLD--GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRD 128 (256)
T ss_pred HHHhCCCCCchhhhh-hhcc--CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCC
Confidence 445556777777665 3332 2568999999999999999844 235689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|+|+||+++.++.+|++|||++...... .
T Consensus 129 l~~~ni~~~~~~~~kl~d~g~~~~~~~~-~-------------------------------------------------- 157 (256)
T cd08530 129 LKSANILLVANDLVKIGDLGISKVLKKN-M-------------------------------------------------- 157 (256)
T ss_pred CCcceEEEecCCcEEEeeccchhhhccC-C--------------------------------------------------
Confidence 9999999999999999999998653211 0
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
.....|+..|+|||.+.+..++.++|+||||+++|||++
T Consensus 158 -----------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~ 196 (256)
T cd08530 158 -----------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMAT 196 (256)
T ss_pred -----------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHh
Confidence 011256888999999998889999999999999999998
Q ss_pred ---CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccc
Q 002801 268 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 325 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~ 325 (879)
||..... ............++.....+..+.+++.+||..+|.+||++.++++||++
T Consensus 197 g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 197 FAPPFEARSM-QDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred CCCCCCCCCH-HHHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 7754433 22333334444444444667889999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-26 Score=244.27 Aligned_cols=198 Identities=17% Similarity=0.205 Sum_probs=151.8
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC---CCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~---~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
.+...+|++++..+. .+.+ ...+|++|||++|++|.++++. ....+++..++.++.||+.||.|||++||+|+|
T Consensus 55 ~l~~~~h~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~d 131 (267)
T cd08229 55 LLKQLNHPNVIKYYA-SFIE--DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRD 131 (267)
T ss_pred HHHHccCCchhhhhh-eeEe--CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCC
Confidence 445567888877776 3332 3468999999999999998842 234689999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+||+++.++.++++|||++........
T Consensus 132 l~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------------- 161 (267)
T cd08229 132 IKPANVFITATGVVKLGDLGLGRFFSSKTT-------------------------------------------------- 161 (267)
T ss_pred CCHHHEEEcCCCCEEECcchhhhccccCCc--------------------------------------------------
Confidence 999999999999999999999865321100
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~ 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 162 ----------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~ 201 (267)
T cd08229 162 ----------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 201 (267)
T ss_pred ----------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHh
Confidence 0011367889999999988889999999999999999999
Q ss_pred ---CCCCChhh-HhHHhhhcccCCCchh-hccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 ---PFSTGEEK-TRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 ---pf~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||...... ......+.....++.. ...++.+.+++.+||..+|.+|||+.+|++
T Consensus 202 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 202 LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred CCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 77543322 2222223222223222 245678899999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-26 Score=246.44 Aligned_cols=199 Identities=18% Similarity=0.178 Sum_probs=151.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC--------CCCChhHHHHHHHHHHHHHHhhhhcC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~--------~~l~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
.+....|++++..+. .+.+ ....|++|||+++++|.+++.... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~ 137 (275)
T cd05046 61 MFRKLSHKNVVRLLG-LCRE--AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR 137 (275)
T ss_pred HHHhcCCcceeeeEE-EECC--CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC
Confidence 345567778777666 5543 346799999999999999995432 15899999999999999999999999
Q ss_pred cccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccc
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+||||||+||+++..+.++++|||+++........
T Consensus 138 i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~-------------------------------------------- 173 (275)
T cd05046 138 FVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY-------------------------------------------- 173 (275)
T ss_pred cccCcCccceEEEeCCCcEEEcccccccccCccccc--------------------------------------------
Confidence 999999999999999999999999998643111000
Q ss_pred cccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHH
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil 262 (879)
......++..|+|||.+.+..++.++|||||||++
T Consensus 174 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 208 (275)
T cd05046 174 ---------------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLM 208 (275)
T ss_pred ---------------------------------------------ccCCceeEEeecChhhhccCCCCchhhHHHHHHHH
Confidence 00112456779999999888899999999999999
Q ss_pred HHhhc----CCCCChhhHhHHhhhcccCC-CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 263 FELFC----PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 263 ~ell~----pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
|||++ ||...... ........... .+.....+..+.+++.+||..+|.+||++.+++..
T Consensus 209 ~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 209 WEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred HHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 99996 66443332 22333332221 22233456778899999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-27 Score=247.67 Aligned_cols=186 Identities=17% Similarity=0.184 Sum_probs=155.5
Q ss_pred ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCC
Q 002801 53 AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 53 ~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~ 132 (879)
....||.||-|-||.|...|++. +.|+...++.|+.-+++|++|||++|||.|||||+|.||+..|-+||.|||.|+.+
T Consensus 492 ~kyvYmLmEaClGGElWTiLrdR-g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki 570 (732)
T KOG0614|consen 492 SKYVYMLMEACLGGELWTILRDR-GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI 570 (732)
T ss_pred chhhhhhHHhhcCchhhhhhhhc-CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh
Confidence 44689999999999999999665 68999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccc
Q 002801 133 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 212 (879)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 212 (879)
+...
T Consensus 571 ~~g~---------------------------------------------------------------------------- 574 (732)
T KOG0614|consen 571 GSGR---------------------------------------------------------------------------- 574 (732)
T ss_pred ccCC----------------------------------------------------------------------------
Confidence 3321
Q ss_pred cchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCc
Q 002801 213 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289 (879)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~ 289 (879)
+.-.+||||.|.|||++....-+.++|+||||+++||||+ ||........+-.++..-....
T Consensus 575 ---------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~ 639 (732)
T KOG0614|consen 575 ---------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIE 639 (732)
T ss_pred ---------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhh
Confidence 2245799999999999999999999999999999999999 7765555444444444332222
Q ss_pred hhhccChhhHHHHHHhcCCCCCCCCC-----HHHHhhcccccCCcC
Q 002801 290 QLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPRD 330 (879)
Q Consensus 290 ~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~evl~hp~~~~~~~ 330 (879)
.+......+.+||.+++..+|.+|.. +.+|..|-||.+...
T Consensus 640 ~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 640 FPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred cccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 33344566789999999999999966 799999999987654
|
|
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-26 Score=244.25 Aligned_cols=199 Identities=14% Similarity=0.123 Sum_probs=150.5
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC------CCCCCChhHHHHHHHHHHHHHHhhhhcCcc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 104 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~------~~~~l~~~~~~~i~~qi~~~l~~lHs~giv 104 (879)
.+...+|++++..++ +|.+ ....|++|||++|++|.+++.+ ....+++.+++.++.||+.||.|||++||+
T Consensus 52 ~l~~l~h~~i~~~~~-~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 128 (269)
T cd05044 52 LMSNFNHPNIVKLLG-VCLL--NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFI 128 (269)
T ss_pred HHHhcCCCCeeeEee-eecC--CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 345567888877666 5543 3468999999999999999943 223478899999999999999999999999
Q ss_pred cccCCCcceeeccCC-----CeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCc
Q 002801 105 VHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 105 HrDlKP~NIll~~~~-----~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
|+||||+||+++..+ .++++|||+++.........
T Consensus 129 H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------------------- 168 (269)
T cd05044 129 HRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYR---------------------------------------- 168 (269)
T ss_pred cCCCChheEEEecCCCCCCcceEECCcccccccccccccc----------------------------------------
Confidence 999999999999877 89999999986532110000
Q ss_pred ccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHH
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlG 259 (879)
......++..|+|||.+.+..++.++||||||
T Consensus 169 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 200 (269)
T cd05044 169 ------------------------------------------------KEGEGLLPVRWMAPESLLDGKFTTQSDVWSFG 200 (269)
T ss_pred ------------------------------------------------cCcccCCCccccCHHHHccCCcccchhHHHHH
Confidence 00112446779999999988899999999999
Q ss_pred HHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 260 VLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 260 vil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|++|||++ ||..... ......+.....+......++.+.+++.+||..+|.+||++.++++
T Consensus 201 ~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 201 VLMWEILTLGQQPYPALNN-QEVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred HHHHHHHHcCCCCCcccCH-HHHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999986 6644333 2233333333233333445677889999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.4e-26 Score=247.41 Aligned_cols=200 Identities=18% Similarity=0.185 Sum_probs=151.6
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..+. .+. .....|++|||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 63 ~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~ 138 (290)
T cd05613 63 QSPFLVTLHY-AFQ--TDTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL 138 (290)
T ss_pred cCCChhceee-Eee--cCCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE
Confidence 4666666554 332 234679999999999999999654 468999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+|++|||+++........
T Consensus 139 ~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------------------- 161 (290)
T cd05613 139 DSNGHVVLTDFGLSKEFHEDEVE--------------------------------------------------------- 161 (290)
T ss_pred CCCCCEEEeeCccceeccccccc---------------------------------------------------------
Confidence 99999999999998653211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--CCCccCcchhHHHHHHHhhc---CCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......|+..|+|||.+.+. .++.++|||||||++|+|++ ||.
T Consensus 162 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 162 --------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred --------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 00123678899999998753 47889999999999999999 664
Q ss_pred CChh---hHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCC-----CHHHHhhcccccCCc
Q 002801 271 TGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~evl~hp~~~~~~ 329 (879)
.... .......+.. ..++......+.+.+++.+||..+|.+|| ++.+++.||||....
T Consensus 210 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 210 VDGEKNSQAEISRRILK-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred cCCccccHHHHHHHhhc-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 2211 1111111111 12233334567788999999999999997 889999999998764
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-26 Score=274.33 Aligned_cols=218 Identities=17% Similarity=0.201 Sum_probs=151.5
Q ss_pred ceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----------CCCCChhHHHHHHHHHHHHHHhh
Q 002801 29 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----------KRSVDVYECLHIFRQIVEIVYAA 98 (879)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----------~~~l~~~~~~~i~~qi~~~l~~l 98 (879)
...+...+|++++..++ ++.+ ....|++|||++|++|.+++... ...++...++.++.||+.||+||
T Consensus 53 i~ILs~L~HPNIVkl~~-v~~d--~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yL 129 (932)
T PRK13184 53 AKIAADLIHPGIVPVYS-ICSD--GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYV 129 (932)
T ss_pred HHHHHhCCCcCcCeEEE-EEee--CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHH
Confidence 34456678888888776 5543 34679999999999999988431 12356678899999999999999
Q ss_pred hhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCC
Q 002801 99 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 178 (879)
Q Consensus 99 Hs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (879)
|++||+||||||+|||++.++.+|++|||+++............ ..
T Consensus 130 Hs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l--------------------------------~~-- 175 (932)
T PRK13184 130 HSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDI--------------------------------DV-- 175 (932)
T ss_pred HHCCccccCCchheEEEcCCCCEEEEecCcceeccccccccccc--------------------------------cc--
Confidence 99999999999999999999999999999997642110000000 00
Q ss_pred cccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhH
Q 002801 179 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 258 (879)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSl 258 (879)
..... ...........+||+.|||||++.+..++.++|||||
T Consensus 176 -------~~~~s-------------------------------~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSL 217 (932)
T PRK13184 176 -------DERNI-------------------------------CYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYAL 217 (932)
T ss_pred -------ccccc-------------------------------cccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHH
Confidence 00000 0000001123579999999999999999999999999
Q ss_pred HHHHHHhhc---CCCCChhhHhHHhhhc-ccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 259 GVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 259 Gvil~ell~---pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||++|||++ ||.............. ...........++.+.+++.+||..||++||+..+.+.
T Consensus 218 GVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 218 GVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred HHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999 7755332222111111 11111112345677889999999999999987666554
|
|
| >KOG0270 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-25 Score=229.02 Aligned_cols=255 Identities=22% Similarity=0.349 Sum_probs=204.5
Q ss_pred EEEEEEcC-------CCCEEEEEeCCCcEEEEecCcccCcCc--------------ccccceEEeccCCCeeEEEEeCCC
Q 002801 571 VCSLSFDR-------DGELFAAAGVNKKIKVFECDAIINENR--------------DIHYPVVEMASRSKLSSICWNSYI 629 (879)
Q Consensus 571 V~~l~fsp-------dg~~lat~~~dg~I~iwd~~~~~~~~~--------------~~~~~~~~~~~~~~i~~l~~~~~~ 629 (879)
..|++|.. -|.++|.|+.|..|.|||+.-...... ..........|+..|..++|+...
T Consensus 176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~ 255 (463)
T KOG0270|consen 176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF 255 (463)
T ss_pred chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence 35666643 367999999999999999864211000 000111122477788899999988
Q ss_pred CCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEecCCceEEE
Q 002801 630 KSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG-VSIGTIKTKANVCCV 708 (879)
Q Consensus 630 ~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~-~~i~~~~~~~~v~~v 708 (879)
.+.||||+.|.+|++||+.++++...+..|.+.|.++.|+|..+..|++||.|++|.+.|++.. ..-..++..+.|..+
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv 335 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKV 335 (463)
T ss_pred ceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEE
Confidence 9999999999999999999999999999999999999999989999999999999999999953 334566778999999
Q ss_pred EeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc--CCCEEEEEEcCCcEEEEecCCCcccccCCce
Q 002801 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPL 786 (879)
Q Consensus 709 ~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs--~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 786 (879)
+|+|.+.+.++++..||+|+.+|+|+...|+.++++|...|++|+++ ...+|+|+|.|+.+++|++..........
T Consensus 336 ~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~-- 413 (463)
T KOG0270|consen 336 AWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKE-- 413 (463)
T ss_pred EecCCCceeEEEecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCccccc--
Confidence 99999889999999999999999999988999999999999999998 77899999999999999998764321111
Q ss_pred EEEeCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecCCCCCce
Q 002801 787 HSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPMPAL 829 (879)
Q Consensus 787 ~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~~~~~~~ 829 (879)
+.+. -+...|.++.|+-. .+|.||..+.++|||+.+..++.
T Consensus 414 ~~~~--~~rl~c~~~~~~~a~~la~GG~k~~~~vwd~~~~~~V~ 455 (463)
T KOG0270|consen 414 HSFK--LGRLHCFALDPDVAFTLAFGGEKAVLRVWDIFTNSPVR 455 (463)
T ss_pred cccc--ccceeecccCCCcceEEEecCccceEEEeecccChhHH
Confidence 1111 12245667777654 67888888899999998766554
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-26 Score=248.92 Aligned_cols=200 Identities=15% Similarity=0.111 Sum_probs=147.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC----------CCCChhHHHHHHHHHHHHHHhhhh
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~----------~~l~~~~~~~i~~qi~~~l~~lHs 100 (879)
.+....|++++..++ .+.+ ....|++|||+.+++|.+++.... ..+++..+..++.||+.||+|||+
T Consensus 72 ~l~~l~~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~ 148 (296)
T cd05095 72 IMSRLKDPNIIRLLA-VCIT--SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS 148 (296)
T ss_pred HHHhCCCCCcceEEE-EEec--CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 344567788877666 4433 345799999999999999985421 236778999999999999999999
Q ss_pred cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcc
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+||+||||||+|||++.++.++++|||+++........
T Consensus 149 ~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------------------------------------ 186 (296)
T cd05095 149 LNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY------------------------------------------ 186 (296)
T ss_pred CCeecccCChheEEEcCCCCEEeccCcccccccCCcce------------------------------------------
Confidence 99999999999999999999999999998653211000
Q ss_pred cccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHH
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGv 260 (879)
.......++..|+|||+..+..++.++|||||||
T Consensus 187 ----------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~ 220 (296)
T cd05095 187 ----------------------------------------------RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGV 220 (296)
T ss_pred ----------------------------------------------eccCcCcCccccCCHHHHhcCCccchhhhhHHHH
Confidence 0001123466799999988888999999999999
Q ss_pred HHHHhhc-----CCCCChhhHhHHhh------hcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 261 LLFELFC-----PFSTGEEKTRTMSS------LRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 261 il~ell~-----pf~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
++|||++ ||............ .......+....+++.+.+|+.+||+.||.+||++.++++
T Consensus 221 ~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 221 TLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999986 66433222211110 0111122333345678889999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-26 Score=273.30 Aligned_cols=97 Identities=10% Similarity=0.074 Sum_probs=84.0
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+....|++++..+. ++. .....||||||+.|++|.+++... +.+++..++.|+.||+.||+|||++|||||||||+
T Consensus 58 l~~l~hp~Iv~~~~-~~~--~~~~~~lVmEy~~g~~L~~li~~~-~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~ 133 (669)
T cd05610 58 LALSKSPFIVHLYY-SLQ--SANNVYLVMEYLIGGDVKSLLHIY-GYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPD 133 (669)
T ss_pred HHhcCCCCcCeEEE-EEE--ECCEEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHH
Confidence 44567888887775 333 234689999999999999999654 46899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCC
Q 002801 112 CFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~ 132 (879)
||||+.++.+||+|||+++..
T Consensus 134 NILl~~~g~vkL~DFGls~~~ 154 (669)
T cd05610 134 NMLISNEGHIKLTDFGLSKVT 154 (669)
T ss_pred HEEEcCCCCEEEEeCCCCccc
Confidence 999999999999999999854
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.1e-26 Score=248.23 Aligned_cols=205 Identities=18% Similarity=0.222 Sum_probs=150.6
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+.+ ....|+||||++ ++|.+++.. ....+++..+..++.||+.||+|||++||+|||||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~--~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~ 129 (294)
T PLN00009 54 LLKEMQHGNIVRLQD-VVHS--EKRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLK 129 (294)
T ss_pred HHHhccCCCEeeEEE-EEec--CCeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence 444557788877776 4433 347899999995 578887743 33346888999999999999999999999999999
Q ss_pred Ccceeecc-CCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccc
Q 002801 110 PSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 188 (879)
Q Consensus 110 P~NIll~~-~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (879)
|+||+++. .+.+|++|||++...+....
T Consensus 130 p~nill~~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------------- 158 (294)
T PLN00009 130 PQNLLIDRRTNALKLADFGLARAFGIPVR--------------------------------------------------- 158 (294)
T ss_pred cceEEEECCCCEEEEcccccccccCCCcc---------------------------------------------------
Confidence 99999985 45799999999865321100
Q ss_pred cccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc
Q 002801 189 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~ 267 (879)
..+...|++.|+|||.+.+. .++.++|||||||++|+|++
T Consensus 159 ---------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~t 199 (294)
T PLN00009 159 ---------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN 199 (294)
T ss_pred ---------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh
Confidence 00123568899999998764 47999999999999999999
Q ss_pred ---CCCCChhhHhHHhhhc--ccC---------------------CCc----hhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 ---PFSTGEEKTRTMSSLR--HRV---------------------LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~~~--~~~---------------------~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.............. ... .+. .....++.+.+++.+||..+|++||++.
T Consensus 200 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ 279 (294)
T PLN00009 200 QKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITAR 279 (294)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHH
Confidence 6654433322222111 000 000 1123456788999999999999999999
Q ss_pred HHhhcccccCCc
Q 002801 318 ELLQSEFLNEPR 329 (879)
Q Consensus 318 evl~hp~~~~~~ 329 (879)
++++||||....
T Consensus 280 ~~l~~~~~~~~~ 291 (294)
T PLN00009 280 AALEHEYFKDLG 291 (294)
T ss_pred HHhcCchHhHHh
Confidence 999999998653
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.1e-26 Score=242.66 Aligned_cols=198 Identities=13% Similarity=0.121 Sum_probs=152.1
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-CCCChhHHHHHHHHHHHHHHhhhhcCcccccCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlK 109 (879)
.+...+|++++..++ .+. .....|++|||+++++|.+++.... ..+++..++.++.||+.||.|||++||+|+|||
T Consensus 54 ~l~~l~h~~i~~~~~-~~~--~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~ 130 (261)
T cd05034 54 IMKKLRHDKLVQLYA-VCS--EEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLA 130 (261)
T ss_pred HHhhCCCCCEeeeee-eee--cCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence 344567888877766 333 2346899999999999999995533 468999999999999999999999999999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||++.........
T Consensus 131 p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------------------------------------------- 159 (261)
T cd05034 131 ARNILVGENLVCKIADFGLARLIEDDEYT--------------------------------------------------- 159 (261)
T ss_pred hheEEEcCCCCEEECccccceeccchhhh---------------------------------------------------
Confidence 99999999999999999998654211000
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 160 --------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g 201 (261)
T cd05034 160 --------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYG 201 (261)
T ss_pred --------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCC
Confidence 0000123557999999998889999999999999999997
Q ss_pred --CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 --pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||..... ......+......+.....+..+.+++.+||..+|.+||++.++++
T Consensus 202 ~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 202 RVPYPGMTN-REVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred CCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 6644333 3333333333333344455678899999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >KOG0641 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.4e-23 Score=197.54 Aligned_cols=251 Identities=20% Similarity=0.274 Sum_probs=206.5
Q ss_pred ccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE-eccCCCeeEEEEeC--CC-CCeEEEee-C
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNS--YI-KSQIASSN-F 638 (879)
Q Consensus 564 l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~l~~~~--~~-~~~l~s~~-~ 638 (879)
-.+|.+.|+|.+|+|+|++||||+.|++|++.-++...+.... +-.+ .-|.+.|..++|-. .. +.+|++++ .
T Consensus 85 ~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g---~dle~nmhdgtirdl~fld~~~s~~~il~s~gag 161 (350)
T KOG0641|consen 85 NKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATG---HDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG 161 (350)
T ss_pred ccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccC---cceeeeecCCceeeeEEecCCCcCceEEEecCCC
Confidence 3589999999999999999999999999999888764332221 1222 23789999999943 22 34566554 3
Q ss_pred CCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEec--------CCceEEEEe
Q 002801 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT--------KANVCCVQF 710 (879)
Q Consensus 639 dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~--------~~~v~~v~~ 710 (879)
|-.|++-|..+++....+.+|++-|.++--- ++-+|++||.|.+|+.||++-..++.++.. .+.|.+|+.
T Consensus 162 dc~iy~tdc~~g~~~~a~sghtghilalysw--n~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 162 DCKIYITDCGRGQGFHALSGHTGHILALYSW--NGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred cceEEEeecCCCCcceeecCCcccEEEEEEe--cCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE
Confidence 5566666888999999999999999887432 688999999999999999999999988863 245999999
Q ss_pred eCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEE
Q 002801 711 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 789 (879)
Q Consensus 711 ~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~ 789 (879)
.|. |++|++|..|....+||+|.++ ++..|..|...|.+|.|+ .-.+++++|.|.+|++-|+...-.. ..++...
T Consensus 240 dps-grll~sg~~dssc~lydirg~r-~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~--el~~~vv 315 (350)
T KOG0641|consen 240 DPS-GRLLASGHADSSCMLYDIRGGR-MIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAH--ELPIMVV 315 (350)
T ss_pred CCC-cceeeeccCCCceEEEEeeCCc-eeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhh--cCceEEE
Confidence 999 9999999999999999999988 589999999999999999 6788999999999999998764211 1345566
Q ss_pred eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecC
Q 002801 790 TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 790 ~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~ 823 (879)
..|...+..+.|+|.+--+++.|.|.++.+|-+.
T Consensus 316 ~ehkdk~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 316 AEHKDKAIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EeccCceEEEEecCccceeeeccCcceEEEeccC
Confidence 6788889999999999889999999999999653
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-26 Score=246.83 Aligned_cols=200 Identities=20% Similarity=0.179 Sum_probs=153.3
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCC-------CCCChhHHHHHHHHHHHHHHhhhhcCc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~-------~~l~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
.+...+|++++..++ .+.++ ....|+++||+.+++|.++|.... ..+++..++.++.||+.||+|||++||
T Consensus 61 ~l~~l~h~ni~~~~~-~~~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i 138 (280)
T cd05043 61 LLYGLSHQNILPILH-VCIED-GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGV 138 (280)
T ss_pred HHHhCCCCCCCeEEE-EEecC-CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 344568888888766 44433 456899999999999999985421 458999999999999999999999999
Q ss_pred ccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccc
Q 002801 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 183 (879)
Q Consensus 104 vHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (879)
+||||||+||+++.++.+|++|||+++.+.......
T Consensus 139 ~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~-------------------------------------------- 174 (280)
T cd05043 139 IHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHC-------------------------------------------- 174 (280)
T ss_pred eecccCHhhEEEcCCCcEEECCCCCcccccCCceEE--------------------------------------------
Confidence 999999999999999999999999997642110000
Q ss_pred ccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHH
Q 002801 184 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 263 (879)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ 263 (879)
......++..|+|||++.+..++.++|||||||++|
T Consensus 175 --------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~ 210 (280)
T cd05043 175 --------------------------------------------LGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLW 210 (280)
T ss_pred --------------------------------------------eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHH
Confidence 000113466799999998888999999999999999
Q ss_pred Hhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 264 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 264 ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|+++ ||..... ......+.....++.....++.+.+++.+||..||++|||+.++++
T Consensus 211 el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 211 ELMTLGQTPYVEIDP-FEMAAYLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HHhcCCCCCcCcCCH-HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9996 6654332 2333333333333334455678899999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >KOG0300 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=216.13 Aligned_cols=279 Identities=18% Similarity=0.287 Sum_probs=230.6
Q ss_pred eecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecC------cc---------
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD------AI--------- 600 (879)
Q Consensus 536 ~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~------~~--------- 600 (879)
+-+++.|.+..+|.+.++++...+. ||.+.|++|+|++.+.+++|++.|++-.||... ..
T Consensus 163 ~gtASADhTA~iWs~Esg~CL~~Y~-----GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsE 237 (481)
T KOG0300|consen 163 CGTASADHTARIWSLESGACLATYT-----GHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSE 237 (481)
T ss_pred eeecccccceeEEeeccccceeeec-----ccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCch
Confidence 3577889999999999999987764 999999999999999999999999999999731 10
Q ss_pred -----------------cCcCcccccceEEe-ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCc
Q 002801 601 -----------------INENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERR 662 (879)
Q Consensus 601 -----------------~~~~~~~~~~~~~~-~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~ 662 (879)
..+...+..|+..+ +|.+.|.+..|.. .+..+++++.|.+..+||+++++.+..+.+|...
T Consensus 238 eE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~-gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~E 316 (481)
T KOG0300|consen 238 EEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLA-GGQQMVTASWDRTANLWDVETGEVVNILTGHDSE 316 (481)
T ss_pred hhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhc-CcceeeeeeccccceeeeeccCceeccccCcchh
Confidence 00001122344443 5888999999987 4899999999999999999999999999999999
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEeCCCC-ceEEEEecC-CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeE
Q 002801 663 VWSIDFSSADPTLLASGSDDGSVKLWSINQG-VSIGTIKTK-ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLC 740 (879)
Q Consensus 663 v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~-~~i~~~~~~-~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~ 740 (879)
.+.++-+| +..++++.|.|.+.++||++.. ..+..|+.+ ..|+++.|..+ ..+++|+.|.+|++||+++++.|+.
T Consensus 317 LtHcstHp-tQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~d--d~vVSgSDDrTvKvWdLrNMRsplA 393 (481)
T KOG0300|consen 317 LTHCSTHP-TQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTD--DRVVSGSDDRTVKVWDLRNMRSPLA 393 (481)
T ss_pred ccccccCC-cceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecC--CceeecCCCceEEEeeeccccCcce
Confidence 99999999 8899999999999999999844 456667754 56999999987 5689999999999999999999999
Q ss_pred EEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC--CEEEEEeCCCcE
Q 002801 741 TLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD--GYVATGSETNEV 817 (879)
Q Consensus 741 ~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~--~~lasgs~Dg~v 817 (879)
++.. .++++.+..+ .+.+|+.-.....|++||++..... ..|...-+||...|.|++|..+- .-|.+||-|..+
T Consensus 394 TIRt-dS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~Rla--RlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v 470 (481)
T KOG0300|consen 394 TIRT-DSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLA--RLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMV 470 (481)
T ss_pred eeec-CCccceeEeecCCceEEeccCCceEEEEecCCCccc--cCCcccccccceeeeeeeccccCccccccccccccee
Confidence 8864 5688999999 5557777777889999999875321 23444667999999999998653 368899999999
Q ss_pred EEEecCCCC
Q 002801 818 FVYHKAFPM 826 (879)
Q Consensus 818 ~vw~~~~~~ 826 (879)
.-|.+..++
T Consensus 471 ~gW~in~p~ 479 (481)
T KOG0300|consen 471 AGWKINTPT 479 (481)
T ss_pred eeeEecccC
Confidence 999988654
|
|
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-26 Score=245.81 Aligned_cols=200 Identities=19% Similarity=0.249 Sum_probs=150.2
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..++ ++.+ ....|++|||+. ++|.+++.+....+++..++.++.||+.||.|||++||+|+||+|+
T Consensus 52 l~~~~~~~i~~~~~-~~~~--~~~~~~v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ 127 (282)
T cd07829 52 LKELKHPNIVKLLD-VIHT--ERKLYLVFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQ 127 (282)
T ss_pred HHhcCCCCHHHHHh-hhhc--CCceEEEecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChh
Confidence 34445777776665 3433 357899999997 5999999765457999999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++|+|||.++.......
T Consensus 128 ni~~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------------ 153 (282)
T cd07829 128 NILINRDGVLKLADFGLARAFGIPLR------------------------------------------------------ 153 (282)
T ss_pred eEEEcCCCCEEEecCCcccccCCCcc------------------------------------------------------
Confidence 99999999999999999865421100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-CCCccCcchhHHHHHHHhhc---
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDIwSlGvil~ell~--- 267 (879)
......++.+|+|||.+.+. .++.++|||||||++|||++
T Consensus 154 ------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~ 197 (282)
T cd07829 154 ------------------------------------TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKP 197 (282)
T ss_pred ------------------------------------ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCC
Confidence 00112457789999999776 68999999999999999999
Q ss_pred CCCCChhhHhHHhhhc-------------------ccCCC--------chhhccChhhHHHHHHhcCCCCCCCCCHHHHh
Q 002801 268 PFSTGEEKTRTMSSLR-------------------HRVLP--------PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 268 pf~~~~~~~~~~~~~~-------------------~~~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl 320 (879)
||.............. ....+ ......+..+.+++.+||..+|++||++.+++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l 277 (282)
T cd07829 198 LFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEAL 277 (282)
T ss_pred CCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHh
Confidence 5544322211111000 00000 11122356788999999999999999999999
Q ss_pred hcccc
Q 002801 321 QSEFL 325 (879)
Q Consensus 321 ~hp~~ 325 (879)
.||||
T Consensus 278 ~~p~~ 282 (282)
T cd07829 278 KHPYF 282 (282)
T ss_pred hCcCC
Confidence 99997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-26 Score=247.12 Aligned_cols=203 Identities=20% Similarity=0.180 Sum_probs=152.7
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++.+......|++|||+++++|.+++......+++..++.++.||+.||.|||++||+|+||||
T Consensus 59 ~l~~l~~~~i~~~~~-~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p 137 (284)
T cd05038 59 ILRTLDHENIVKYKG-VCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAA 137 (284)
T ss_pred HHHhCCCCChheEEe-eeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence 344567777777655 6666556678999999999999999966555689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+...........
T Consensus 138 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-------------------------------------------------- 167 (284)
T cd05038 138 RNILVESEDLVKISDFGLAKVLPEDKDYYY-------------------------------------------------- 167 (284)
T ss_pred HhEEEcCCCCEEEcccccccccccCCccee--------------------------------------------------
Confidence 999999999999999999876421100000
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~--- 267 (879)
......++..|+|||.+.+..++.++|||||||++|||++
T Consensus 168 -------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~ 210 (284)
T cd05038 168 -------------------------------------VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD 210 (284)
T ss_pred -------------------------------------ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCC
Confidence 0001133556999999988889999999999999999999
Q ss_pred CCCCChhhH--------------hHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 268 PFSTGEEKT--------------RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 pf~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
|+....... .....+......+.....+..+.+++.+||..+|.+|||+.|+++
T Consensus 211 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 211 PSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred CcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 554322111 111111222222233345577889999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.6e-24 Score=210.37 Aligned_cols=237 Identities=22% Similarity=0.348 Sum_probs=205.6
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEE--eccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCC
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE--MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~--~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~ 692 (879)
.|..++.+|+|+. ++..|++|+.|+++.+|+++..+.... +.+|.+.|-.++|+|..+.+|++++.|.+|++||+++
T Consensus 18 ~~~~~v~Sv~wn~-~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~ 96 (313)
T KOG1407|consen 18 GHVQKVHSVAWNC-DGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRS 96 (313)
T ss_pred hhhhcceEEEEcc-cCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEecc
Confidence 4678999999998 499999999999999999987754433 4689999999999998899999999999999999999
Q ss_pred CceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEE
Q 002801 693 GVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKL 771 (879)
Q Consensus 693 ~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~l 771 (879)
++++..+.....-.-+.|+|+ +.++++|+.|..|.+.|.|+.+. +... .....+.-+.|+ ++++++....-|+|.|
T Consensus 97 ~k~~~~i~~~~eni~i~wsp~-g~~~~~~~kdD~it~id~r~~~~-~~~~-~~~~e~ne~~w~~~nd~Fflt~GlG~v~I 173 (313)
T KOG1407|consen 97 GKCTARIETKGENINITWSPD-GEYIAVGNKDDRITFIDARTYKI-VNEE-QFKFEVNEISWNNSNDLFFLTNGLGCVEI 173 (313)
T ss_pred CcEEEEeeccCcceEEEEcCC-CCEEEEecCcccEEEEEecccce-eehh-cccceeeeeeecCCCCEEEEecCCceEEE
Confidence 999999998888778999999 89999999999999999999873 4333 234567888998 7777777777799999
Q ss_pred EecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCE
Q 002801 772 WDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFI 851 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 851 (879)
-..... +++.+++.|.....||.|+|+|+|+|+||.|-.+.+||+..--.+.. +.-+.-+|
T Consensus 174 LsypsL------kpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~-------------isRldwpV 234 (313)
T KOG1407|consen 174 LSYPSL------KPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERC-------------ISRLDWPV 234 (313)
T ss_pred Eecccc------ccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhhee-------------eccccCce
Confidence 998876 89999999999999999999999999999999999999875333322 24457789
Q ss_pred EEEEEeCCCCcEEEEEeCCCcEEE
Q 002801 852 SSVCWRGQSSNTLVAANSSGNIKI 875 (879)
Q Consensus 852 ~~v~~~p~~~~~l~s~~~Dg~I~v 875 (879)
+.+.|+-+|. +||+|+.|..|-|
T Consensus 235 RTlSFS~dg~-~lASaSEDh~IDI 257 (313)
T KOG1407|consen 235 RTLSFSHDGR-MLASASEDHFIDI 257 (313)
T ss_pred EEEEeccCcc-eeeccCccceEEe
Confidence 9999999999 9999999999865
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-26 Score=253.34 Aligned_cols=219 Identities=16% Similarity=0.157 Sum_probs=156.0
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+...+|++++..++ ++.. ....|++|||+. ++|.+++... ..+++..+..++.||+.||.|||++||+|+||||
T Consensus 73 ~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~ 147 (335)
T PTZ00024 73 IMNEIKHENIMGLVD-VYVE--GDFINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSP 147 (335)
T ss_pred HHHhCCCcceeeeeE-EEec--CCcEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence 455567888877666 4433 346799999996 5899999554 4689999999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++..+.++++|||+++....+......... . .
T Consensus 148 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~--------------------------~----~-------------- 183 (335)
T PTZ00024 148 ANIFINSKGICKIADFGLARRYGYPPYSDTLSKD--------------------------E----T-------------- 183 (335)
T ss_pred HHeEECCCCCEEECCccceeeccccccccccccc--------------------------c----c--------------
Confidence 9999999999999999999765432111000000 0 0
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~-- 267 (879)
. ..........++..|+|||.+.+.. ++.++|||||||++|||++
T Consensus 184 ---------------------------~-----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~ 231 (335)
T PTZ00024 184 ---------------------------M-----QRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGK 231 (335)
T ss_pred ---------------------------c-----cccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 0 0000012235688999999997654 7999999999999999999
Q ss_pred -CCCCChhhHhHHhhhcc---cC--------------------CCc----hhhccChhhHHHHHHhcCCCCCCCCCHHHH
Q 002801 268 -PFSTGEEKTRTMSSLRH---RV--------------------LPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~---~~--------------------~~~----~~~~~~~~~~~li~~~L~~dP~~Rpt~~ev 319 (879)
||....... .+..+.. .. .++ .....+..+.++|.+||..+|++||+++++
T Consensus 232 ~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~ 310 (335)
T PTZ00024 232 PLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEA 310 (335)
T ss_pred CCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHH
Confidence 554433322 1111100 00 000 112235668899999999999999999999
Q ss_pred hhcccccCCcCc
Q 002801 320 LQSEFLNEPRDS 331 (879)
Q Consensus 320 l~hp~~~~~~~~ 331 (879)
+.||||+.....
T Consensus 311 l~~~~~~~~~~~ 322 (335)
T PTZ00024 311 LKHEYFKSDPLP 322 (335)
T ss_pred hcCcccCCCCCC
Confidence 999999875443
|
|
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.3e-26 Score=240.03 Aligned_cols=198 Identities=19% Similarity=0.209 Sum_probs=155.7
Q ss_pred ecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCc
Q 002801 32 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 111 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~ 111 (879)
+...+|++++..+. .+. ....+|++|||+.+++|.+++... ..+++.++..++.||+.||.|||++|++|+||||+
T Consensus 47 l~~l~h~~i~~~~~-~~~--~~~~~~~v~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ 122 (250)
T cd05123 47 LSRINHPFIVKLHY-AFQ--TEEKLYLVLEYAPGGELFSHLSKE-GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPE 122 (250)
T ss_pred HHHcCCCcHHHHHH-Hee--cCCeeEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcc
Confidence 34456777777665 332 355789999999999999999655 46899999999999999999999999999999999
Q ss_pred ceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccccc
Q 002801 112 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 191 (879)
Q Consensus 112 NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (879)
||+++.++.++++|||++........
T Consensus 123 ni~~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------------------ 148 (250)
T cd05123 123 NILLDADGHIKLTDFGLAKELSSEGS------------------------------------------------------ 148 (250)
T ss_pred eEEEcCCCcEEEeecCcceecccCCC------------------------------------------------------
Confidence 99999999999999999865311100
Q ss_pred ccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---C
Q 002801 192 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---P 268 (879)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---p 268 (879)
......|+..|+|||.+.+...+.++|+||||+++|||++ |
T Consensus 149 ------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p 192 (250)
T cd05123 149 ------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPP 192 (250)
T ss_pred ------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 0012367888999999988889999999999999999999 7
Q ss_pred CCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH---HHHhhcccc
Q 002801 269 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 325 (879)
Q Consensus 269 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~---~evl~hp~~ 325 (879)
|........ ...+... ..+.....+..+.+++.+||..||.+||++ +++++||||
T Consensus 193 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 193 FYAEDRKEI-YEKILKD-PLRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred CCCCCHHHH-HHHHhcC-CCCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 755443222 2222221 222333346788999999999999999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.8e-26 Score=245.43 Aligned_cols=213 Identities=18% Similarity=0.178 Sum_probs=155.6
Q ss_pred cccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeec
Q 002801 37 HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 116 (879)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~ 116 (879)
|++++..++ ++.+ ....|++||++.+++|.+++.+. +.+++..++.|+.||+.||.|||+.|++|+||||+||+++
T Consensus 61 ~~~i~~~~~-~~~~--~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~ 136 (280)
T cd05581 61 HPGIIKLYY-TFQD--EENLYFVLEYAPNGELLQYIRKY-GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD 136 (280)
T ss_pred CCCchhHHH-HhcC--CceEEEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC
Confidence 888877666 4433 34689999999999999999665 4799999999999999999999999999999999999999
Q ss_pred cCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcc
Q 002801 117 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 196 (879)
Q Consensus 117 ~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (879)
.++.++++|||++............... .. .
T Consensus 137 ~~~~~~l~df~~~~~~~~~~~~~~~~~~-------------~~---------------------------~--------- 167 (280)
T cd05581 137 KDMHIKITDFGTAKVLDPNSSPESNKGD-------------AT---------------------------N--------- 167 (280)
T ss_pred CCCCEEecCCccccccCCccccccCCCC-------------Cc---------------------------c---------
Confidence 9999999999999765332111000000 00 0
Q ss_pred eeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCCh
Q 002801 197 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 273 (879)
Q Consensus 197 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~ 273 (879)
++. .............|+..|+|||.+.+..++.++|||||||++|+|++ ||....
T Consensus 168 -------------~~~--------~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 168 -------------IDS--------QIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred -------------ccc--------cccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 000 00000001123478899999999988889999999999999999999 665443
Q ss_pred hhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCH----HHHhhcccc
Q 002801 274 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFL 325 (879)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~----~evl~hp~~ 325 (879)
......... .. ........++.+.+|+.+||..+|.+||++ +++++||||
T Consensus 227 ~~~~~~~~~-~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 227 EYLTFQKIL-KL-EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHHHHHHHH-hc-CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 322222222 11 111222346788999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.1e-26 Score=243.21 Aligned_cols=200 Identities=14% Similarity=0.109 Sum_probs=144.4
Q ss_pred eeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCC----CCCCChhHHHHHHHHHHHHHHhhhhcCccc
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQGIVV 105 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~----~~~l~~~~~~~i~~qi~~~l~~lHs~givH 105 (879)
..+.+..|++++..++ .+.+ ....|++|||+++++|.++|... ...+++..++.++.||+.||+|||+.||+|
T Consensus 47 ~~l~~l~h~~iv~~~~-~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H 123 (269)
T cd05087 47 QPYRSLQHSNLLQCLG-QCTE--VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIH 123 (269)
T ss_pred HHHHhCCCCCEeeEEE-EEcC--CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 3445667888877665 4443 34579999999999999999532 124567788899999999999999999999
Q ss_pred ccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccc
Q 002801 106 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 106 rDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
|||||+||+++.++.+|++|||+++........
T Consensus 124 ~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~----------------------------------------------- 156 (269)
T cd05087 124 SDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY----------------------------------------------- 156 (269)
T ss_pred cccCcceEEEcCCCcEEECCccccccccCccee-----------------------------------------------
Confidence 999999999999999999999998642111000
Q ss_pred ccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-------CCCccCcchhH
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSCASDIYRL 258 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~~~~sDIwSl 258 (879)
.......|+..|+|||++.+. .++.++|||||
T Consensus 157 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Diwsl 195 (269)
T cd05087 157 -----------------------------------------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSL 195 (269)
T ss_pred -----------------------------------------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHH
Confidence 000123567889999998642 35889999999
Q ss_pred HHHHHHhhc----CCCCChhhHhHHhhhccc---CC-CchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 259 GVLLFELFC----PFSTGEEKTRTMSSLRHR---VL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 259 Gvil~ell~----pf~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
||++|||++ ||................ .. +......++.+.+++..|+ .+|++|||+++++.
T Consensus 196 G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 196 GVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred HHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 999999985 775443333222222211 11 1112234566789999998 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.5e-24 Score=212.20 Aligned_cols=249 Identities=20% Similarity=0.303 Sum_probs=198.2
Q ss_pred cCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC-CeE-EEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-SQV-LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 616 ~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~-~~~-~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
....|++|+|+|.....+++|+.||+|++|+++. ++. .+....|.++|.+++|+. +|+.+++|+.|+.+++||+.++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~Wsd-dgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSD-DGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEcc-CCceEEeeccCCceEEEEccCC
Confidence 5678999999997788899999999999999976 332 244567999999999998 9999999999999999999999
Q ss_pred ceEEEEecCCceEEEEeeCCCCC--EEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEcCCCEEEEEEcCCcEEE
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGR--SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKL 771 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~--~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs~~~~l~s~s~D~~i~l 771 (879)
+....-.|.++|.++.|-+. .. .|+|||.|.+|++||+|... ++.++.-. ..|+++.. -...++.+..++.|.+
T Consensus 105 Q~~~v~~Hd~pvkt~~wv~~-~~~~cl~TGSWDKTlKfWD~R~~~-pv~t~~LP-eRvYa~Dv-~~pm~vVata~r~i~v 180 (347)
T KOG0647|consen 105 QVSQVAAHDAPVKTCHWVPG-MNYQCLVTGSWDKTLKFWDTRSSN-PVATLQLP-ERVYAADV-LYPMAVVATAERHIAV 180 (347)
T ss_pred CeeeeeecccceeEEEEecC-CCcceeEecccccceeecccCCCC-eeeeeecc-ceeeehhc-cCceeEEEecCCcEEE
Confidence 88777778889999999876 44 79999999999999999877 57776543 34454433 3457888889999999
Q ss_pred EecCCCcccccCCceEEE-eCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCC
Q 002801 772 WDLSMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
|++.++.. ..+.. ..-.-.+.+|+..++....|.||-.|.+.|.++..+.+...+.|.......+ ..+.-..
T Consensus 181 ynL~n~~t-----e~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~--~~~~VYa 253 (347)
T KOG0647|consen 181 YNLENPPT-----EFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNS--VNDDVYA 253 (347)
T ss_pred EEcCCCcc-----hhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCC--CCCceEE
Confidence 99987631 11111 1122357899999998888999999999999999987766666554332111 2233578
Q ss_pred EEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 851 ISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
|++|+|+|.-. +|+|+|+||++.+||
T Consensus 254 VNsi~FhP~hg-tlvTaGsDGtf~FWD 279 (347)
T KOG0647|consen 254 VNSIAFHPVHG-TLVTAGSDGTFSFWD 279 (347)
T ss_pred ecceEeecccc-eEEEecCCceEEEec
Confidence 99999999888 999999999999998
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.8e-26 Score=244.36 Aligned_cols=201 Identities=19% Similarity=0.183 Sum_probs=151.3
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
+|++++..++ ... .....|+||||+.|++|.+++.+. ..+++.+++.++.|++.||+|||+.|++||||||+||++
T Consensus 63 ~~~~i~~~~~-~~~--~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~ 138 (288)
T cd05583 63 RCPFLVTLHY-AFQ--TDTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILL 138 (288)
T ss_pred CCcchhhhhe-eee--cCCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE
Confidence 5667766555 222 234679999999999999999654 468999999999999999999999999999999999999
Q ss_pred ccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCc
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.++++|||+++........
T Consensus 139 ~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------------------- 161 (288)
T cd05583 139 DSEGHVVLTDFGLSKEFLAEEEE--------------------------------------------------------- 161 (288)
T ss_pred CCCCCEEEEECcccccccccccc---------------------------------------------------------
Confidence 99999999999998653211000
Q ss_pred ceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC--CCccCcchhHHHHHHHhhc---CCC
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 196 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDIwSlGvil~ell~---pf~ 270 (879)
......|+..|+|||.+.+.. .+.++||||||+++|||++ ||.
T Consensus 162 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 162 --------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred --------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 001135788999999987765 7889999999999999999 664
Q ss_pred CChhh---HhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCC---HHHHhhcccccCCcC
Q 002801 271 TGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPRD 330 (879)
Q Consensus 271 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt---~~evl~hp~~~~~~~ 330 (879)
..... .......... .++......+.+.+++.+||..+|++||| +.++|+||||+....
T Consensus 210 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 210 VDGEQNSQSEISRRILKS-KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred cCcccchHHHHHHHHHcc-CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 32111 1111111111 22333345678899999999999999998 467799999987654
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG2055 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=8.3e-24 Score=220.24 Aligned_cols=292 Identities=16% Similarity=0.265 Sum_probs=237.3
Q ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEE
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd 646 (879)
..++|++|.|+|...++++||.||+++||.++...+...... .-...+|.+.+|.|...+.+++++.-...+.||
T Consensus 212 s~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~-----~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyD 286 (514)
T KOG2055|consen 212 SHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSI-----HLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYD 286 (514)
T ss_pred CcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheee-----eeccCccceeeecCCCceEEEecccceEEEEee
Confidence 457899999999999999999999999999987444311110 113568999999997555999999999999999
Q ss_pred cCCCeEE--EEeccCC-CcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeC
Q 002801 647 VSRSQVL--TEMREHE-RRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 647 ~~~~~~~--~~~~~h~-~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~ 723 (879)
+.+.+.. ....++. ..+.....+| ++++++..+..|.|.|....+++.+.+++..+.|..++|+.+ +..|++++.
T Consensus 287 le~ak~~k~~~~~g~e~~~~e~FeVSh-d~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~~fsSd-sk~l~~~~~ 364 (514)
T KOG2055|consen 287 LETAKVTKLKPPYGVEEKSMERFEVSH-DSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDFTFSSD-SKELLASGG 364 (514)
T ss_pred ccccccccccCCCCcccchhheeEecC-CCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeEEEecC-CcEEEEEcC
Confidence 9988753 3344444 4577778888 899999999999999999999999999999999999999988 688888888
Q ss_pred CCeEEEEEcCCCceeeEEEccCCCCE--EEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEE
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTV--SYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 724 d~~I~iwDl~~~~~~~~~~~~h~~~V--~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
+|.|++||++.... ++.+.. .+.| ++++-+ ++.+||+||..|.|.|||.++.......+|+..+..-+..|+++.
T Consensus 365 ~GeV~v~nl~~~~~-~~rf~D-~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~ 442 (514)
T KOG2055|consen 365 TGEVYVWNLRQNSC-LHRFVD-DGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQ 442 (514)
T ss_pred CceEEEEecCCcce-EEEEee-cCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeee
Confidence 99999999999864 776653 3344 455556 999999999999999999887654445688888888888999999
Q ss_pred EecCCCEEEEEeC--CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 801 LSVWDGYVATGSE--TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 801 ~sp~~~~lasgs~--Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
|+++++.||.+|. ++.+++-++.+-..-. .|+... ..-+.|+|++|+|.|. +||.|+.+|.+.+|.|
T Consensus 443 Fn~d~qiLAiaS~~~knalrLVHvPS~TVFs--NfP~~n--------~~vg~vtc~aFSP~sG-~lAvGNe~grv~l~kL 511 (514)
T KOG2055|consen 443 FNHDAQILAIASRVKKNALRLVHVPSCTVFS--NFPTSN--------TKVGHVTCMAFSPNSG-YLAVGNEAGRVHLFKL 511 (514)
T ss_pred eCcchhhhhhhhhccccceEEEeccceeeec--cCCCCC--------CcccceEEEEecCCCc-eEEeecCCCceeeEee
Confidence 9999998888775 6889999987543322 232222 2356799999999999 9999999999999986
|
|
| >KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-25 Score=229.30 Aligned_cols=263 Identities=21% Similarity=0.303 Sum_probs=223.5
Q ss_pred cCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc-CCCe
Q 002801 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKL 620 (879)
Q Consensus 542 d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~i 620 (879)
-|-|||||++.-.-..-..+-++..-.+-|.++.+.|||+.|++||.-.++.|||+......-. .++.. .-.+
T Consensus 439 kgcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDLAapTprik------aeltssapaC 512 (705)
T KOG0639|consen 439 KGCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPRIK------AELTSSAPAC 512 (705)
T ss_pred CCeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeeccCCCcchh------hhcCCcchhh
Confidence 7899999998754443344456667788999999999999999999999999999986322111 11112 2346
Q ss_pred eEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe
Q 002801 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK 700 (879)
Q Consensus 621 ~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~ 700 (879)
..++.+|. .+..+++..||.|.|||+.+...++.|.+|+..+.||++++ +|..|.||+-|.+|+.||++++..+....
T Consensus 513 yALa~spD-akvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~-dGtklWTGGlDntvRcWDlregrqlqqhd 590 (705)
T KOG0639|consen 513 YALAISPD-AKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISK-DGTKLWTGGLDNTVRCWDLREGRQLQQHD 590 (705)
T ss_pred hhhhcCCc-cceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecC-CCceeecCCCccceeehhhhhhhhhhhhh
Confidence 67888884 78888888899999999999999999999999999999999 99999999999999999999999998888
Q ss_pred cCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcc
Q 002801 701 TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTS 779 (879)
Q Consensus 701 ~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~ 779 (879)
..+.|.++.+.|. +.++++|-.++.|.+....... ...+..|.+.|.+++|. -|+++++.+.|+.+..|.+..+
T Consensus 591 F~SQIfSLg~cP~-~dWlavGMens~vevlh~skp~--kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyG-- 665 (705)
T KOG0639|consen 591 FSSQIFSLGYCPT-GDWLAVGMENSNVEVLHTSKPE--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG-- 665 (705)
T ss_pred hhhhheecccCCC-ccceeeecccCcEEEEecCCcc--ceeecccccEEEEEEecccCceeeecCchhhhhhccCccc--
Confidence 8999999999999 8999999999999888877665 45666799999999999 9999999999999999999887
Q ss_pred cccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 780 RVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 780 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
..+...+ ....|.++..|.|++||+|||.|....||.+
T Consensus 666 ----asiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 666 ----ASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ----cceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 3333333 4567999999999999999999999999975
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.6e-24 Score=205.57 Aligned_cols=239 Identities=18% Similarity=0.265 Sum_probs=211.6
Q ss_pred cceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEE
Q 002801 609 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 609 ~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw 688 (879)
.|+...+|..+|+-|.+|.. +++|.+++.|.++.||-..+|+.+.++.+|++.|||++.+. +..++++|+.|.+++||
T Consensus 2 rpi~l~GHERplTqiKyN~e-GDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~-~s~~liTGSAD~t~kLW 79 (327)
T KOG0643|consen 2 RPILLQGHERPLTQIKYNRE-GDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDW-DSKHLITGSADQTAKLW 79 (327)
T ss_pred CccccccCccccceEEecCC-CcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecC-CcceeeeccccceeEEE
Confidence 35667789999999999984 99999999999999999989999999999999999999998 88999999999999999
Q ss_pred eCCCCceEEEEecCCceEEEEeeCCCCCEEEEEeC-----CCeEEEEEcCCC------ceeeEEEccCCCCEEEEEEc-C
Q 002801 689 SINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA-----DHRIYYYDLRNS------KIPLCTLIGHNKTVSYVKFV-D 756 (879)
Q Consensus 689 d~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~-----d~~I~iwDl~~~------~~~~~~~~~h~~~V~~v~fs-~ 756 (879)
|+.+|+++.+++.+..|..+.|+++ +++++.... .+.|.++|++.. +.|+..+..+.+.++.+.|. -
T Consensus 80 Dv~tGk~la~~k~~~~Vk~~~F~~~-gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l 158 (327)
T KOG0643|consen 80 DVETGKQLATWKTNSPVKRVDFSFG-GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL 158 (327)
T ss_pred EcCCCcEEEEeecCCeeEEEeeccC-CcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc
Confidence 9999999999999999999999999 777766643 458999999943 34688888889999999998 9
Q ss_pred CCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCC
Q 002801 757 ATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHA 836 (879)
Q Consensus 757 ~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~ 836 (879)
++.|++|..||.|.+||++++. ..+.+-.-|...|+.+.++++..|++|||.|.+.++||+.+-+.+.++..
T Consensus 159 ~~~ii~Ghe~G~is~~da~~g~-----~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t--- 230 (327)
T KOG0643|consen 159 GETIIAGHEDGSISIYDARTGK-----ELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT--- 230 (327)
T ss_pred CCEEEEecCCCcEEEEEcccCc-----eeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEeee---
Confidence 9999999999999999999973 45666678999999999999999999999999999999998887777652
Q ss_pred CCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCC
Q 002801 837 DPLSGPETDDAAQFISSVCWRGQSSNTLVAANSS 870 (879)
Q Consensus 837 ~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~D 870 (879)
..+|++.+++|... .++.+|..
T Consensus 231 -----------e~PvN~aaisP~~d-~VilgGGq 252 (327)
T KOG0643|consen 231 -----------ERPVNTAAISPLLD-HVILGGGQ 252 (327)
T ss_pred -----------cccccceecccccc-eEEecCCc
Confidence 34699999999887 66655543
|
|
| >KOG1539 consensus WD repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-23 Score=228.38 Aligned_cols=310 Identities=16% Similarity=0.210 Sum_probs=243.7
Q ss_pred ecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEecc
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 ~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+.|+..|-+++|++.+++++.+++ ++.+.|+++.=+|-=+.+|.|..+|+|.||++... ..+..+.+
T Consensus 176 vvGs~~G~lql~Nvrt~K~v~~f~-----~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~d--------kil~sFk~ 242 (910)
T KOG1539|consen 176 VVGSSQGRLQLWNVRTGKVVYTFQ-----EFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFD--------KILMSFKQ 242 (910)
T ss_pred EEeecCCcEEEEEeccCcEEEEec-----ccccceeEeccCCcceEEEEeccCceEEEEEcccC--------cEEEEEEc
Confidence 678999999999999999998887 56689999999998889999999999999998753 23455666
Q ss_pred C-CCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEec-cCCCcEEEEEEecCCCCEEEEEeCCCcEEEE------
Q 002801 617 R-SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLW------ 688 (879)
Q Consensus 617 ~-~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~-~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iw------ 688 (879)
. +.|++++|.......+++|+..|.+.+||++..+.+..+. .|.+.|....|-| ....+++.+.|.++++|
T Consensus 243 d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~-~epVl~ta~~DnSlk~~vfD~~d 321 (910)
T KOG1539|consen 243 DWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLP-GEPVLVTAGADNSLKVWVFDSGD 321 (910)
T ss_pred cccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecC-CCceEeeccCCCceeEEEeeCCC
Confidence 5 9999999988766788888889999999998776654443 4555555555555 44455555555555444
Q ss_pred -----------------------------------------eCCC-----------------------------------
Q 002801 689 -----------------------------------------SINQ----------------------------------- 692 (879)
Q Consensus 689 -----------------------------------------d~~~----------------------------------- 692 (879)
++.+
T Consensus 322 g~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~f 401 (910)
T KOG1539|consen 322 GVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEF 401 (910)
T ss_pred CcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceee
Confidence 2210
Q ss_pred ------------------C-ceEEEE------------ecC------CceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCC
Q 002801 693 ------------------G-VSIGTI------------KTK------ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS 735 (879)
Q Consensus 693 ------------------~-~~i~~~------------~~~------~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~ 735 (879)
+ ....++ .+. ..+.+|+.++- |++.+.|+..|.|-+|++.++
T Consensus 402 a~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~C-GNF~~IG~S~G~Id~fNmQSG 480 (910)
T KOG1539|consen 402 AFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFC-GNFVFIGYSKGTIDRFNMQSG 480 (910)
T ss_pred ecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEecc-CceEEEeccCCeEEEEEcccC
Confidence 0 000111 111 34788888887 899999999999999999988
Q ss_pred ceeeEEE---ccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCccc-------------------------------
Q 002801 736 KIPLCTL---IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSR------------------------------- 780 (879)
Q Consensus 736 ~~~~~~~---~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~------------------------------- 780 (879)
-. ...| ..|.++|+.++.. -++.++|++.+|.+++||.+.....
T Consensus 481 i~-r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~ 559 (910)
T KOG1539|consen 481 IH-RKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIR 559 (910)
T ss_pred ee-ecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEE
Confidence 64 5566 5899999999997 8889999999999999999875310
Q ss_pred ----ccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEE
Q 002801 781 ----VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW 856 (879)
Q Consensus 781 ----~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 856 (879)
...+.++.|.||++.|+.++|||||++|++++.|++|++||+.++..+-.+.+ ..++.++.|
T Consensus 560 vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~v--------------d~~~~sls~ 625 (910)
T KOG1539|consen 560 VVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLV--------------DSPCTSLSF 625 (910)
T ss_pred EEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEec--------------CCcceeeEE
Confidence 11235677889999999999999999999999999999999999988876653 345889999
Q ss_pred eCCCCcEEEEEeCC-CcEEEEE
Q 002801 857 RGQSSNTLVAANSS-GNIKILE 877 (879)
Q Consensus 857 ~p~~~~~l~s~~~D-g~I~vw~ 877 (879)
+|+|+ +|||+..| .-|++|-
T Consensus 626 SPngD-~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 626 SPNGD-FLATVHVDQNGIYLWS 646 (910)
T ss_pred CCCCC-EEEEEEecCceEEEEE
Confidence 99999 99999999 4599994
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.7e-26 Score=248.90 Aligned_cols=206 Identities=18% Similarity=0.214 Sum_probs=152.9
Q ss_pred eecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCC
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP 110 (879)
.+....|++++..++ ++.. .....|++|||+ +++|.++++. ..+++..+..++.||+.||+|||++||+||||||
T Consensus 62 ~l~~l~hpniv~~~~-~~~~-~~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p 136 (328)
T cd07856 62 LLKHLRHENIISLSD-IFIS-PLEDIYFVTELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKP 136 (328)
T ss_pred HHHhcCCCCeeeEee-eEec-CCCcEEEEeehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCH
Confidence 344557788877665 3332 234679999998 6789998854 3578899999999999999999999999999999
Q ss_pred cceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccc
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++.++.++++|||.+......
T Consensus 137 ~Nili~~~~~~~l~dfg~~~~~~~~------------------------------------------------------- 161 (328)
T cd07856 137 SNILINENCDLKICDFGLARIQDPQ------------------------------------------------------- 161 (328)
T ss_pred HHEeECCCCCEEeCccccccccCCC-------------------------------------------------------
Confidence 9999999999999999988542100
Q ss_pred cccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC-CCCCccCcchhHHHHHHHhhc--
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~-- 267 (879)
.....++..|+|||.+.+ ..++.++|||||||++|||++
T Consensus 162 --------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~ 203 (328)
T cd07856 162 --------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGK 203 (328)
T ss_pred --------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCC
Confidence 011356888999999876 558999999999999999999
Q ss_pred -CCCCChhhHhHH--------------------------hhhccc-CCC--chhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 268 -PFSTGEEKTRTM--------------------------SSLRHR-VLP--PQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 268 -pf~~~~~~~~~~--------------------------~~~~~~-~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
||.......... ..+... ..+ .......+.+.++|.+||..+|++||++.
T Consensus 204 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ 283 (328)
T cd07856 204 PLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAA 283 (328)
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHH
Confidence 664332211000 000000 001 01123456788999999999999999999
Q ss_pred HHhhcccccCCcCchHH
Q 002801 318 ELLQSEFLNEPRDSMEE 334 (879)
Q Consensus 318 evl~hp~~~~~~~~~~e 334 (879)
+++.||||.....+..+
T Consensus 284 ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 284 EALAHPYLAPYHDPTDE 300 (328)
T ss_pred HHhcCCccccccCCccc
Confidence 99999999876666544
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-23 Score=206.77 Aligned_cols=295 Identities=22% Similarity=0.293 Sum_probs=221.9
Q ss_pred CCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEecCcccC--cCcccccce------EEeccCCCeeEEEEeCCCCCeEEEe
Q 002801 566 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIIN--ENRDIHYPV------VEMASRSKLSSICWNSYIKSQIASS 636 (879)
Q Consensus 566 ~h~~~V~~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~--~~~~~~~~~------~~~~~~~~i~~l~~~~~~~~~l~s~ 636 (879)
.|.+.|+++..++ .|+++++|+.||.|.+||++.... ........+ .+..|+..|+++-|-|.+..++.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 6789999999998 799999999999999999986321 111111111 1235778899999999999999999
Q ss_pred eCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCC--CCEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCC
Q 002801 637 NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD--PTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLD 713 (879)
Q Consensus 637 ~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~--~~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~ 713 (879)
+.|.+++|||.+|.|..-.|+ .++.|.+-+++|.. ..++|+|..|-.|++.|+.+|..-.++.. ..+|.+|.|+|.
T Consensus 121 SFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~ 199 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPS 199 (397)
T ss_pred cccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccC
Confidence 999999999999999887775 56788888888842 45889999999999999999999999985 567999999999
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeEEE--------------ccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCc
Q 002801 714 SGRSLAFGSADHRIYYYDLRNSKIPLCTL--------------IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCT 778 (879)
Q Consensus 714 ~~~~l~tgs~d~~I~iwDl~~~~~~~~~~--------------~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~ 778 (879)
....|++|+.||.|++||+|...-+...+ ..|.+.|..++|. ++.++++.+.|..+++|+..++.
T Consensus 200 ~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 200 SEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred ceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 88889999999999999999864333333 3566789999998 99999999999999999999885
Q ss_pred ccc--cCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEE
Q 002801 779 SRV--IDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW 856 (879)
Q Consensus 779 ~~~--~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~ 856 (879)
... ..+.++.-..|- ...+. +-+...++---.++.+.++.+-.+..+.-++ .|...|.+.++
T Consensus 280 ntl~~~g~~~~n~~~~~--~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~-------------~h~k~i~c~~~ 343 (397)
T KOG4283|consen 280 NTLREFGPIIHNQTTSF--AVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLS-------------THLKRINCAAY 343 (397)
T ss_pred ccccccccccccccccc--eEEEe-ecccceEEEEecCCeEEEEEccCceEEEeee-------------cccceeeEEee
Confidence 421 001111111110 00111 2222333333345667777766665554432 45566899999
Q ss_pred eCCCCcEEEEEeCCCcEEEEEe
Q 002801 857 RGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 857 ~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
.|+-. .+.++..||.|..|-.
T Consensus 344 ~~~fq-~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 344 RPDFE-QCFTGDMNGNIYMWSP 364 (397)
T ss_pred cCchh-hhhccccCCccccccc
Confidence 99988 8999999999999853
|
|
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.8e-25 Score=235.46 Aligned_cols=287 Identities=20% Similarity=0.317 Sum_probs=227.3
Q ss_pred CCCCCEE---EEEEcC-CCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCc
Q 002801 566 NSSNLVC---SLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 641 (879)
Q Consensus 566 ~h~~~V~---~l~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~ 641 (879)
.|.+.|. ++..+. ++++|.|||.||.|++|++........ ..+....-.|...|+.+..... ++.|+|++.|-+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s-~~~~asme~HsDWVNDiiL~~~-~~tlIS~SsDtT 96 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPS-TPYIASMEHHSDWVNDIILCGN-GKTLISASSDTT 96 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcc-cchhhhhhhhHhHHhhHHhhcC-CCceEEecCCce
Confidence 4566666 666664 677899999999999999876433211 1122233347778888888763 789999999999
Q ss_pred EEEEEcCCC--eEEEEeccCCCcEEEEEE-ecCCCCEEEEEeCCCcEEEEeCCCC--ceEEEEe----------cCCceE
Q 002801 642 VQVWDVSRS--QVLTEMREHERRVWSIDF-SSADPTLLASGSDDGSVKLWSINQG--VSIGTIK----------TKANVC 706 (879)
Q Consensus 642 V~vwd~~~~--~~~~~~~~h~~~v~sv~~-sp~~~~~lasgs~Dg~V~iwd~~~~--~~i~~~~----------~~~~v~ 706 (879)
|++|+...+ -++.++..|..-|.|+++ -+ +..++|||+-|+.|+|||++++ ..+.++. ++..|.
T Consensus 97 VK~W~~~~~~~~c~stir~H~DYVkcla~~ak-~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siY 175 (735)
T KOG0308|consen 97 VKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAK-NNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIY 175 (735)
T ss_pred EEEeecccCcchhHhhhhcccchheeeeeccc-CceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCcccee
Confidence 999999877 578888999999999999 55 8889999999999999999987 2333332 245699
Q ss_pred EEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCc
Q 002801 707 CVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTP 785 (879)
Q Consensus 707 ~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 785 (879)
+++.++. +..|++|+..+.+++||.++.+. +..++||+..|..+..+ ||..++|+|.||+|++||+... +|
T Consensus 176 SLA~N~t-~t~ivsGgtek~lr~wDprt~~k-imkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQ------rC 247 (735)
T KOG0308|consen 176 SLAMNQT-GTIIVSGGTEKDLRLWDPRTCKK-IMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQ------RC 247 (735)
T ss_pred eeecCCc-ceEEEecCcccceEEeccccccc-eeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccc------ce
Confidence 9999998 78999999999999999999986 88899999999999999 9999999999999999999976 89
Q ss_pred eEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEE
Q 002801 786 LHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLV 865 (879)
Q Consensus 786 ~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~ 865 (879)
+.++..|...|+++..+|+=.++.+|+.||.|+.=|+..... ...-|... .+|..+..+.+.. -+-
T Consensus 248 l~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~-~tlick~d------------aPv~~l~~~~~~~-~~W 313 (735)
T KOG0308|consen 248 LATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAK-STLICKED------------APVLKLHLHEHDN-SVW 313 (735)
T ss_pred eeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchh-heEeecCC------------CchhhhhhccccC-Cce
Confidence 999999999999999999989999999999999999987521 11222222 2344444443333 345
Q ss_pred EEeCCCcEEEEE
Q 002801 866 AANSSGNIKILE 877 (879)
Q Consensus 866 s~~~Dg~I~vw~ 877 (879)
++..|+.|+-|.
T Consensus 314 vtTtds~I~rW~ 325 (735)
T KOG0308|consen 314 VTTTDSSIKRWK 325 (735)
T ss_pred eeeccccceecC
Confidence 556666777664
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=238.96 Aligned_cols=194 Identities=15% Similarity=0.212 Sum_probs=150.0
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhc---CCCCCCChhHHHHHHHHHHHHHHhhhh-cCcccccCC
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVR 109 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~---~~~~~l~~~~~~~i~~qi~~~l~~lHs-~givHrDlK 109 (879)
..+|++++..++ .+.+ ....|++|||++|++|.+++. .....+++..++.++.|++.||.|||+ .||+|+|||
T Consensus 65 ~~~h~~i~~~~~-~~~~--~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~ 141 (269)
T cd08528 65 QLRHPNIVRYYK-TFLE--NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLT 141 (269)
T ss_pred cCCCCCeeeEEe-eEcc--CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCC
Confidence 356777777666 4432 446899999999999998872 344568999999999999999999996 789999999
Q ss_pred CcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccccc
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++.++.+|++|||.+.......
T Consensus 142 ~~nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------------- 168 (269)
T cd08528 142 PNNIMLGEDDKVTITDFGLAKQKQPES----------------------------------------------------- 168 (269)
T ss_pred HHHEEECCCCcEEEecccceeeccccc-----------------------------------------------------
Confidence 999999999999999999986532110
Q ss_pred ccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~-- 267 (879)
......|+..|+|||.+.+..++.++|||||||++|||++
T Consensus 169 --------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~ 210 (269)
T cd08528 169 --------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQ 210 (269)
T ss_pred --------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCC
Confidence 0012367888999999998889999999999999999998
Q ss_pred -CCCCChhhHhHHhhhcccCCCch-hhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
||........ ...+......+. ....++.+.+++.+||..||++||++.|+..+
T Consensus 211 ~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 211 PPFYSTNMLSL-ATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred CcccccCHHHH-HHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 7654433322 222222322222 22456789999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.9e-26 Score=244.18 Aligned_cols=221 Identities=19% Similarity=0.178 Sum_probs=176.7
Q ss_pred ccccccc-----ccCCCCCcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCCh
Q 002801 7 RGERFGV-----RGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81 (879)
Q Consensus 7 ~~~~~~~-----~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~ 81 (879)
-|++++| +.|..++..-....+......-+|++++...+ +|.++ ..+||||+++-|.|++||+.+...|+.
T Consensus 415 kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIG-v~~e~---P~WivmEL~~~GELr~yLq~nk~sL~l 490 (974)
T KOG4257|consen 415 KGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIG-VCVEQ---PMWIVMELAPLGELREYLQQNKDSLPL 490 (974)
T ss_pred cCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheee-eeecc---ceeEEEecccchhHHHHHHhccccchH
Confidence 4666655 34444444222223444555678888888777 88754 479999999999999999888888999
Q ss_pred hHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhh
Q 002801 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (879)
Q Consensus 82 ~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (879)
.....++.||+.||.||||..+|||||-..|||+....-||++|||+++-.+.+..-..
T Consensus 491 ~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYka--------------------- 549 (974)
T KOG4257|consen 491 RTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKA--------------------- 549 (974)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhc---------------------
Confidence 99999999999999999999999999999999999999999999999987644322100
Q ss_pred hhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceecc
Q 002801 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (879)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (879)
+..-=..-||||
T Consensus 550 --------------------------------------------------------------------S~~kLPIKWmaP 561 (974)
T KOG4257|consen 550 --------------------------------------------------------------------SRGKLPIKWMAP 561 (974)
T ss_pred --------------------------------------------------------------------cccccceeecCc
Confidence 000002349999
Q ss_pred ccccCCCCCccCcchhHHHHHHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHH
Q 002801 242 EELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 242 E~~~~~~~~~~sDIwSlGvil~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
|.+.-..++.+||||-|||.+||+|. ||..-.+. ..+..+..+...|.+..++|.+..|+.+||.++|.+||.+.
T Consensus 562 ESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs-DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrft 640 (974)
T KOG4257|consen 562 ESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS-DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFT 640 (974)
T ss_pred cccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc-ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHH
Confidence 99999999999999999999999998 99766554 45556677778888889999999999999999999999999
Q ss_pred HHhh
Q 002801 318 ELLQ 321 (879)
Q Consensus 318 evl~ 321 (879)
|+..
T Consensus 641 ei~~ 644 (974)
T KOG4257|consen 641 EIKA 644 (974)
T ss_pred HHHH
Confidence 8754
|
|
| >KOG1408 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.6e-23 Score=227.07 Aligned_cols=320 Identities=16% Similarity=0.257 Sum_probs=252.4
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCC----------C---------CCEEEEEEcCCCCEEEEEeCCCcEEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNS----------S---------NLVCSLSFDRDGELFAAAGVNKKIKV 594 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h----------~---------~~V~~l~fspdg~~lat~~~dg~I~i 594 (879)
+.++.|..+|+|++++..++....++...+..+. . -..-++.|++..+.+.+.-.|..|+|
T Consensus 271 r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~klscVYndhSlYv 350 (1080)
T KOG1408|consen 271 RLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDKLSCVYNDHSLYV 350 (1080)
T ss_pred ceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCceEEEEEcCceEEE
Confidence 4558889999999999998887777654332221 1 12346789998889998999999999
Q ss_pred EecCcccCcCcccccceEEeccCCCeeEEEEeCCC----------CCeEEEeeCCCcEEEEEcCCC---eEEEE------
Q 002801 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYI----------KSQIASSNFEGVVQVWDVSRS---QVLTE------ 655 (879)
Q Consensus 595 wd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~----------~~~l~s~~~dg~V~vwd~~~~---~~~~~------ 655 (879)
||+........ .-..+.|...|+.+.--|++ ...+++++.||+|++||+..+ +..+.
T Consensus 351 WDvrD~~kvgk----~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~ 426 (1080)
T KOG1408|consen 351 WDVRDVNKVGK----CSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSAN 426 (1080)
T ss_pred Eeccccccccc----eeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhh
Confidence 99987432221 12234566777777655521 356899999999999998642 11000
Q ss_pred -----ec-----------------------cCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEe-cCCceE
Q 002801 656 -----MR-----------------------EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVC 706 (879)
Q Consensus 656 -----~~-----------------------~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~-~~~~v~ 706 (879)
+. ...-.+.+++.+| ++.+||+|..-|.++|||+..-.....+. |.+.|.
T Consensus 427 l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp-~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEil 505 (1080)
T KOG1408|consen 427 LSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSP-DGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEIL 505 (1080)
T ss_pred hhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECC-CcceecccCccCceEEEEehhhhhhhheecccceeE
Confidence 00 0223589999999 99999999999999999999887777776 567799
Q ss_pred EEEeeCC--CCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CC--------------------------
Q 002801 707 CVQFPLD--SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DA-------------------------- 757 (879)
Q Consensus 707 ~v~~~p~--~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~-------------------------- 757 (879)
|+.|+-. ..++||+++.|..|++||+...-.++.++.+|...|++|+|. +|
T Consensus 506 cLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~ 585 (1080)
T KOG1408|consen 506 CLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGR 585 (1080)
T ss_pred EEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCce
Confidence 9999743 246899999999999999988776788999999999999996 33
Q ss_pred -----------------------CEEEEEEcCCcEEEEecCCCcccccCCceEEEeC---CCCcEEEEEEecCCCEEEEE
Q 002801 758 -----------------------TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTG---HTNVKNFVGLSVWDGYVATG 811 (879)
Q Consensus 758 -----------------------~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~---h~~~v~~v~~sp~~~~lasg 811 (879)
+++++++.|..|+|||+.++ +..++|+| |.+....|.+.|.|-||||.
T Consensus 586 ~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sg------Kq~k~FKgs~~~eG~lIKv~lDPSgiY~atS 659 (1080)
T KOG1408|consen 586 LFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESG------KQVKSFKGSRDHEGDLIKVILDPSGIYLATS 659 (1080)
T ss_pred eccccccccccceEEEeeeCCCcceEEEEecccceEEEecccc------ceeeeecccccCCCceEEEEECCCccEEEEe
Confidence 14688999999999999998 56677764 55667788999999999999
Q ss_pred eCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 812 SETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 812 s~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..|.++.+||..+++.+... .+|+..|+.+.|.+|.. .|++++.||.|-||.+
T Consensus 660 csdktl~~~Df~sgEcvA~m-------------~GHsE~VTG~kF~nDCk-HlISvsgDgCIFvW~l 712 (1080)
T KOG1408|consen 660 CSDKTLCFVDFVSGECVAQM-------------TGHSEAVTGVKFLNDCK-HLISVSGDGCIFVWKL 712 (1080)
T ss_pred ecCCceEEEEeccchhhhhh-------------cCcchheeeeeecccch-hheeecCCceEEEEEC
Confidence 99999999999998877654 47899999999999999 9999999999999986
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-25 Score=244.13 Aligned_cols=199 Identities=14% Similarity=0.117 Sum_probs=141.0
Q ss_pred cccccCCCCCCccccccc--ccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcc
Q 002801 35 GDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 112 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~--~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~N 112 (879)
..|++++..++ .+.... ....|++|+++ ..++.+.++.. ...++..++.|+.||+.||+|||++||+||||||+|
T Consensus 80 ~~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~N 156 (294)
T PHA02882 80 IDHLGIPKYYG-CGSFKRCRMYYRFILLEKL-VENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPEN 156 (294)
T ss_pred CCCCCCCcEEE-eeeEecCCceEEEEEEehh-ccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 45666666554 222221 12347778877 34666666443 346888999999999999999999999999999999
Q ss_pred eeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccc
Q 002801 113 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 192 (879)
Q Consensus 113 Ill~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (879)
||++..+.++|+|||+++.+.........
T Consensus 157 ill~~~~~~~l~DFGla~~~~~~~~~~~~--------------------------------------------------- 185 (294)
T PHA02882 157 IMVDGNNRGYIIDYGIASHFIIHGKHIEY--------------------------------------------------- 185 (294)
T ss_pred EEEcCCCcEEEEEcCCceeeccCCccccc---------------------------------------------------
Confidence 99999999999999999764221000000
Q ss_pred cCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CC
Q 002801 193 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 269 (879)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf 269 (879)
.........||+.|+|||+..+..++.++|||||||+||||++ ||
T Consensus 186 --------------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~ 233 (294)
T PHA02882 186 --------------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPW 233 (294)
T ss_pred --------------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 0000122468999999999999999999999999999999998 88
Q ss_pred CCChhhHhHH--------hhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhh
Q 002801 270 STGEEKTRTM--------SSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 270 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~ 321 (879)
.......... ..+..... .....++.+.+++..|+..+|.+||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 234 KGFGHNGNLIHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CccccchHHHHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 6542222111 12221111 12334567889999999999999999999875
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.2e-24 Score=243.07 Aligned_cols=279 Identities=19% Similarity=0.237 Sum_probs=221.6
Q ss_pred eeccc--ccCceEEEeecCcE-EE---EE-ec--cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcc----cC
Q 002801 536 WINPF--LEGLCKYLSFSKLR-VK---AD-LN--QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI----IN 602 (879)
Q Consensus 536 ~~~~~--~d~~i~~w~~~~~~-~~---~~-l~--~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~----~~ 602 (879)
+++|. .|+.+.+|+....- .. .. +. -..+..|.+.|+|+.|+|||++||+|+.|+.|.||+.... ..
T Consensus 28 ~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~f 107 (942)
T KOG0973|consen 28 FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVF 107 (942)
T ss_pred EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccc
Confidence 36666 78899999765421 11 01 11 1345689999999999999999999999999999998830 00
Q ss_pred -------cCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCE
Q 002801 603 -------ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675 (879)
Q Consensus 603 -------~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~ 675 (879)
.............|.+.|..++|+| ++.++++++.|++|.||+..+.+.+..+++|...|-.+.|.| -|++
T Consensus 108 gs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp-~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP-~Gky 185 (942)
T KOG0973|consen 108 GSTGGAKNVESWKVVSILRGHDSDVLDVNWSP-DDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDP-IGKY 185 (942)
T ss_pred cccccccccceeeEEEEEecCCCccceeccCC-CccEEEEecccceEEEEccccceeeeeeecccccccceEECC-ccCe
Confidence 0111112333456999999999999 599999999999999999999999999999999999999999 8999
Q ss_pred EEEEeCCCcEEEEeCCCCceEEEEec-------CCceEEEEeeCCCCCEEEEEeC----CCeEEEEEcCCCceeeEEEcc
Q 002801 676 LASGSDDGSVKLWSINQGVSIGTIKT-------KANVCCVQFPLDSGRSLAFGSA----DHRIYYYDLRNSKIPLCTLIG 744 (879)
Q Consensus 676 lasgs~Dg~V~iwd~~~~~~i~~~~~-------~~~v~~v~~~p~~~~~l~tgs~----d~~I~iwDl~~~~~~~~~~~~ 744 (879)
||+=++|++|+||.+......+++.. ..-...+.|+|+ |++|++..+ -.++.|.+-.+.+. -..+.|
T Consensus 186 ~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPD-G~~las~nA~n~~~~~~~IieR~tWk~-~~~LvG 263 (942)
T KOG0973|consen 186 FASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPD-GHHLASPNAVNGGKSTIAIIERGTWKV-DKDLVG 263 (942)
T ss_pred eeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCC-cCeecchhhccCCcceeEEEecCCcee-eeeeec
Confidence 99999999999999887666666652 223888999999 899998754 33788888876663 677889
Q ss_pred CCCCEEEEEEc------CCC------------EEEEEEcCCcEEEEecCCCcccccCCceEEEe-CCCCcEEEEEEecCC
Q 002801 745 HNKTVSYVKFV------DAT------------TLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT-GHTNVKNFVGLSVWD 805 (879)
Q Consensus 745 h~~~V~~v~fs------~~~------------~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~ 805 (879)
|.+++.+++|+ +.. .+|+||.|++|-||..... +|+.... --...|..++|+|||
T Consensus 264 H~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~------RPl~vi~~lf~~SI~DmsWspdG 337 (942)
T KOG0973|consen 264 HSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALP------RPLFVIHNLFNKSIVDMSWSPDG 337 (942)
T ss_pred CCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCC------CchhhhhhhhcCceeeeeEcCCC
Confidence 99999999994 122 6789999999999999765 4443322 123469999999999
Q ss_pred CEEEEEeCCCcEEEEecCC
Q 002801 806 GYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 806 ~~lasgs~Dg~v~vw~~~~ 824 (879)
-.|..||.||+|.+.+++.
T Consensus 338 ~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 338 FSLFACSLDGTVALIHFEE 356 (942)
T ss_pred CeEEEEecCCeEEEEEcch
Confidence 9999999999999999863
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-27 Score=232.88 Aligned_cols=211 Identities=18% Similarity=0.186 Sum_probs=163.1
Q ss_pred ccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcC----CCCCCChhHHHHHHHHHHHHHHh
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYA 97 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~----~~~~l~~~~~~~i~~qi~~~l~~ 97 (879)
+|+.|.+.+ ....+-+++|.+|+ ++.. +.+.+|.||++ ..||..+.+. ....+++.-.-+|..-.++||+|
T Consensus 108 rll~e~d~~-mks~~cp~IVkfyG-a~F~--EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y 182 (361)
T KOG1006|consen 108 RLLMEHDTV-MKSSNCPNIVKFYG-ALFS--EGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY 182 (361)
T ss_pred HHHHHHHHH-HhhcCCcHHHHHhh-hhhc--CCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence 344454433 33457888888888 5543 34679999999 6788765421 23468999999999999999999
Q ss_pred hhh-cCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccC
Q 002801 98 AHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 176 (879)
Q Consensus 98 lHs-~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (879)
|-. ..|||||+||+||||+..|.||+||||+|-++...
T Consensus 183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------------------------------- 221 (361)
T KOG1006|consen 183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------------------------------- 221 (361)
T ss_pred HHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH-----------------------------------------
Confidence 986 48999999999999999999999999999664111
Q ss_pred CCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccC--CCCCccCc
Q 002801 177 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASD 254 (879)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sD 254 (879)
...+.-.|-..|||||.+.. ..|+.+||
T Consensus 222 --------------------------------------------------iAkT~daGCrpYmAPERi~p~~~gyDiRSD 251 (361)
T KOG1006|consen 222 --------------------------------------------------IAKTVDAGCRPYMAPERIDPSDKGYDIRSD 251 (361)
T ss_pred --------------------------------------------------HHhhhccCCccccChhccCCccCCcchhhh
Confidence 01234578889999999964 34999999
Q ss_pred chhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchh-----hccChhhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 255 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 255 IwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
+||||++|||+.| ||..+.........+..+..|... ...+..+..+|.-||.+|-+.||...+++.+||++
T Consensus 252 vWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr 331 (361)
T KOG1006|consen 252 VWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYR 331 (361)
T ss_pred hhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhh
Confidence 9999999999999 887777665555555554443222 23567889999999999999999999999999997
Q ss_pred CC
Q 002801 327 EP 328 (879)
Q Consensus 327 ~~ 328 (879)
..
T Consensus 332 ~y 333 (361)
T KOG1006|consen 332 MY 333 (361)
T ss_pred hh
Confidence 54
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-26 Score=218.50 Aligned_cols=197 Identities=15% Similarity=0.228 Sum_probs=155.5
Q ss_pred ccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceee
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll 115 (879)
.++|++..+. +..|.....+-++.||+.+.+.+++. ..|+..+++.++.|++.||+|+||+||+|||+||.|+||
T Consensus 91 gg~NIi~L~D-iV~Dp~SktpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmI 165 (338)
T KOG0668|consen 91 GGPNIIKLLD-IVKDPESKTPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMI 165 (338)
T ss_pred CCCCeeehhh-hhcCccccCchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeee
Confidence 5889999888 66677777889999999999998876 457899999999999999999999999999999999999
Q ss_pred ccC-CCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccC
Q 002801 116 SSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 194 (879)
Q Consensus 116 ~~~-~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (879)
+.. ..++++|+|+|-..-..
T Consensus 166 dh~~rkLrlIDWGLAEFYHp~----------------------------------------------------------- 186 (338)
T KOG0668|consen 166 DHELRKLRLIDWGLAEFYHPG----------------------------------------------------------- 186 (338)
T ss_pred chhhceeeeeecchHhhcCCC-----------------------------------------------------------
Confidence 954 56999999999654111
Q ss_pred cceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---CCC
Q 002801 195 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 195 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~---pf~ 270 (879)
. .....+-+..|.-||.+..-+ |+.+-|+|||||+|.+|+. ||+
T Consensus 187 --------~------------------------eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF 234 (338)
T KOG0668|consen 187 --------K------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 234 (338)
T ss_pred --------c------------------------eeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence 0 012235577899999998755 8999999999999999998 998
Q ss_pred CChhhHhHHhhhcc---------------cCCCchh---------------------hccChhhHHHHHHhcCCCCCCCC
Q 002801 271 TGEEKTRTMSSLRH---------------RVLPPQL---------------------LLKFPKEASFCLWLLHPEPSGRP 314 (879)
Q Consensus 271 ~~~~~~~~~~~~~~---------------~~~~~~~---------------------~~~~~~~~~li~~~L~~dP~~Rp 314 (879)
.+.......-.+.. -.++|.+ .-.+|++.+|+.++|..|..+|+
T Consensus 235 hG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRl 314 (338)
T KOG0668|consen 235 HGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERL 314 (338)
T ss_pred CCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcccccc
Confidence 77544433211110 0111111 11357889999999999999999
Q ss_pred CHHHHhhcccccCC
Q 002801 315 KMGELLQSEFLNEP 328 (879)
Q Consensus 315 t~~evl~hp~~~~~ 328 (879)
|+.|++.||||...
T Consensus 315 TakEam~HpyF~~~ 328 (338)
T KOG0668|consen 315 TAKEAMAHPYFAPV 328 (338)
T ss_pred chHHHhcCchHHHH
Confidence 99999999999754
|
|
| >KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.7e-24 Score=206.96 Aligned_cols=247 Identities=20% Similarity=0.328 Sum_probs=197.3
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCC---eEEEEeccCCCcEEEEEEe-cCCCCEEEEEeCCCcEEEEeC
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS---QVLTEMREHERRVWSIDFS-SADPTLLASGSDDGSVKLWSI 690 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~---~~~~~~~~h~~~v~sv~~s-p~~~~~lasgs~Dg~V~iwd~ 690 (879)
.|...|.++...-+ +..|++++.|++|+|+.++.. +.+.++.+|.++||.++|. |.-|++||+++.||.|.||.-
T Consensus 9 ~H~D~IHda~lDyy-gkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke 87 (299)
T KOG1332|consen 9 QHEDMIHDAQLDYY-GKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKE 87 (299)
T ss_pred hhhhhhhHhhhhhh-cceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEec
Confidence 46667777766655 899999999999999999654 5678899999999999994 556899999999999999998
Q ss_pred CCCceEEEE---ecCCceEEEEeeCCC-CCEEEEEeCCCeEEEEEcCCCc--eeeEEEccCCCCEEEEEEc----CC---
Q 002801 691 NQGVSIGTI---KTKANVCCVQFPLDS-GRSLAFGSADHRIYYYDLRNSK--IPLCTLIGHNKTVSYVKFV----DA--- 757 (879)
Q Consensus 691 ~~~~~i~~~---~~~~~v~~v~~~p~~-~~~l~tgs~d~~I~iwDl~~~~--~~~~~~~~h~~~V~~v~fs----~~--- 757 (879)
.++.--+.. .+.+.|++|+|-|.. |-.|++++.||.|.+.+.+... ..-.....|.-.|++++|. +|
T Consensus 88 ~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~ 167 (299)
T KOG1332|consen 88 ENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLV 167 (299)
T ss_pred CCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCcccc
Confidence 877322222 246789999999873 5678999999999999988752 2234566899999999996 34
Q ss_pred --------CEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCC----CEEEEEeCCCcEEEEecCCC
Q 002801 758 --------TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD----GYVATGSETNEVFVYHKAFP 825 (879)
Q Consensus 758 --------~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~----~~lasgs~Dg~v~vw~~~~~ 825 (879)
..|+||+-|+.|+||+..+... ..-+++.+|+..|..|+|.|.- .+||+||.||+|.||-....
T Consensus 168 ~~~~~~~~krlvSgGcDn~VkiW~~~~~~w----~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e 243 (299)
T KOG1332|consen 168 DQGPAAKVKRLVSGGCDNLVKIWKFDSDSW----KLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEE 243 (299)
T ss_pred ccCcccccceeeccCCccceeeeecCCcch----hhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCc
Confidence 5699999999999999998632 3445689999999999999974 38999999999999987622
Q ss_pred CCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEE
Q 002801 826 MPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~ 877 (879)
. . +........-...|..+.|+..|. +|+.++.|..|.+|.
T Consensus 244 ~--e--------~wk~tll~~f~~~~w~vSWS~sGn-~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 244 Y--E--------PWKKTLLEEFPDVVWRVSWSLSGN-ILAVSGGDNKVTLWK 284 (299)
T ss_pred c--C--------cccccccccCCcceEEEEEecccc-EEEEecCCcEEEEEE
Confidence 1 1 111222223356799999999999 999999999999995
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.4e-26 Score=224.71 Aligned_cols=158 Identities=18% Similarity=0.204 Sum_probs=124.3
Q ss_pred cchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCccccccccc
Q 002801 66 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 145 (879)
Q Consensus 66 ~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~ 145 (879)
|+|.++++..+..+++.+++.|++||+.||.|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 6899999765667999999999999999999999999 999999999999999 998865311
Q ss_pred ccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCC
Q 002801 146 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 225 (879)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 225 (879)
T Consensus 62 -------------------------------------------------------------------------------- 61 (176)
T smart00750 62 -------------------------------------------------------------------------------- 61 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccccceeccccccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCC------chhhccCh
Q 002801 226 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP------PQLLLKFP 296 (879)
Q Consensus 226 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 296 (879)
....||+.|||||++.+..++.++|||||||++|||++ ||............+.....+ +.......
T Consensus 62 ----~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 62 ----EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred ----ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 01157899999999999999999999999999999999 775443322222222221111 11112222
Q ss_pred --hhHHHHHHhcCCCCCCCCCHHHHhhccccc
Q 002801 297 --KEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 297 --~~~~li~~~L~~dP~~Rpt~~evl~hp~~~ 326 (879)
.+.+++.+||..+|.+||++.|+++|+|+.
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRAL 169 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence 588999999999999999999999999875
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.3e-26 Score=253.67 Aligned_cols=206 Identities=15% Similarity=0.159 Sum_probs=161.3
Q ss_pred ecccccccCCCCCCcccc---cccccCceEEEEeeCCcchhhhhcC-CCCCCChhHHHHHHHHHHHHHHhhhhcCccccc
Q 002801 32 LTHGDHLRNQGGLSGVCE---NEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~---~~~~~~~~lv~e~~~g~sL~~~l~~-~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrD 107 (879)
....+|+|++.+|+ ++. ......++||||||.|||.-++++. .+..+.|..+..|++.++.||.+||...+||||
T Consensus 70 ~~~~~hpnv~~fyg-~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRD 148 (953)
T KOG0587|consen 70 KKYSHHPNVATFYG-AFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRD 148 (953)
T ss_pred HhccCCCCcceEEE-EEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeec
Confidence 34567777777666 332 2345679999999999999999853 256799999999999999999999999999999
Q ss_pred CCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccccccccc
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
||-.||||+.++.||++|||++.++.....
T Consensus 149 ikG~NiLLT~e~~VKLvDFGvSaQldsT~g-------------------------------------------------- 178 (953)
T KOG0587|consen 149 IKGQNVLLTENAEVKLVDFGVSAQLDSTVG-------------------------------------------------- 178 (953)
T ss_pred ccCceEEEeccCcEEEeeeeeeeeeecccc--------------------------------------------------
Confidence 999999999999999999999977532200
Q ss_pred ccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC-----CCCccCcchhHHHHH
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCASDIYRLGVLL 262 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sDIwSlGvil 262 (879)
+....+||+.|||||++.-. .|+..+|+||||++.
T Consensus 179 ----------------------------------------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITa 218 (953)
T KOG0587|consen 179 ----------------------------------------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITA 218 (953)
T ss_pred ----------------------------------------cccCcCCCcccccceeeecccCCCCCcccccchhhcccee
Confidence 22446999999999999632 378899999999999
Q ss_pred HHhhc--CCCCChhhHhHHhhhcccCCCc--hhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccCC
Q 002801 263 FELFC--PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 263 ~ell~--pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~~ 328 (879)
.||-. |....+....++..+...+.|. .+...+.++.+||..||.+|-.+||++.++|+|||+...
T Consensus 219 IEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 219 IEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred ehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 99998 3334444444444333332221 123445678899999999999999999999999999843
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-25 Score=232.27 Aligned_cols=206 Identities=17% Similarity=0.219 Sum_probs=161.2
Q ss_pred ccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhc--CcccccCCCc
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--GIVVHNVRPS 111 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~--givHrDlKP~ 111 (879)
..+|+++|..|+....| ....+-|+|||+|.+|.-||+.. +.+++.+++.|+.||+.||.||.+. -|||-||||.
T Consensus 523 eLDHpRIVKlYDyfslD--tdsFCTVLEYceGNDLDFYLKQh-klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPg 599 (775)
T KOG1151|consen 523 ELDHPRIVKLYDYFSLD--TDSFCTVLEYCEGNDLDFYLKQH-KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPG 599 (775)
T ss_pred ccCcceeeeeeeeeeec--cccceeeeeecCCCchhHHHHhh-hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCc
Confidence 36899999988844333 33567899999999999999766 5789999999999999999999986 5999999999
Q ss_pred ceeec---cCCCeeeeecccccCCCCCCcc--cccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccc
Q 002801 112 CFVMS---SFNHVSFIESASCSDSGSDSHE--EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 112 NIll~---~~~~vkl~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||||. ..|.+||+|||+++..+.++.. +++.
T Consensus 600 NILLv~GtacGeIKITDFGLSKIMdddSy~~vdGme-------------------------------------------- 635 (775)
T KOG1151|consen 600 NILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGME-------------------------------------------- 635 (775)
T ss_pred cEEEecCcccceeEeeecchhhhccCCccCccccee--------------------------------------------
Confidence 99994 5688999999999987665443 1110
Q ss_pred cccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCC--C--CCccCcchhHHHHH
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--P--VSCASDIYRLGVLL 262 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~--~~~~sDIwSlGvil 262 (879)
......||.||.+||++.-+ + .+.++||||+|||+
T Consensus 636 -----------------------------------------LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIF 674 (775)
T KOG1151|consen 636 -----------------------------------------LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIF 674 (775)
T ss_pred -----------------------------------------eecccCceeeecCcceeecCCCCCccccceeeEeeehhh
Confidence 01234899999999998643 2 79999999999999
Q ss_pred HHhhc---CCCCChhhHhHHhh---hcc-cCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 263 FELFC---PFSTGEEKTRTMSS---LRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 263 ~ell~---pf~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
|.++. ||.........+.. +.. .+-.|.-+-.++++.+||++||.+.-++|....++..||||..
T Consensus 675 yQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 675 YQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 99998 99655443333221 111 1222333456788999999999999999999999999999964
|
|
| >KOG0288 consensus WD40 repeat protein TipD [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=221.69 Aligned_cols=264 Identities=16% Similarity=0.238 Sum_probs=220.2
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
+-+.+|..|..|++|+..-.+ .+ ..+.|.|..++|++++|+++++++++++.|+.+++|+++...... ..
T Consensus 188 dtlatgg~Dr~Ik~W~v~~~k--~~-~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~-------TL 257 (459)
T KOG0288|consen 188 DTLATGGSDRIIKLWNVLGEK--SE-LISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRH-------TL 257 (459)
T ss_pred chhhhcchhhhhhhhhcccch--hh-hhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchhhhh-------hh
Confidence 456888999999999877655 12 236677888999999999999999999999999999998632211 11
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~ 693 (879)
-+|..+|+++.|... ...+++|++|.+|++||+....+.+++- ....++.|..+ +..+++|-.|++|++||+++.
T Consensus 258 sGHtdkVt~ak~~~~-~~~vVsgs~DRtiK~WDl~k~~C~kt~l-~~S~cnDI~~~---~~~~~SgH~DkkvRfwD~Rs~ 332 (459)
T KOG0288|consen 258 SGHTDKVTAAKFKLS-HSRVVSGSADRTIKLWDLQKAYCSKTVL-PGSQCNDIVCS---ISDVISGHFDKKVRFWDIRSA 332 (459)
T ss_pred cccccceeeehhhcc-ccceeeccccchhhhhhhhhhheecccc-ccccccceEec---ceeeeecccccceEEEeccCC
Confidence 248999999999764 4449999999999999999988877763 44567777765 467999999999999999999
Q ss_pred ceEEEEecCCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccC----CCCEEEEEEc-CCCEEEEEEcCCc
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH----NKTVSYVKFV-DATTLVSASTDNT 768 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h----~~~V~~v~fs-~~~~l~s~s~D~~ 768 (879)
.+......++.|+++..+++ +..+++++.|.++.+.|+|+... ...+.+. ..-++.+.|+ ++.|+++||.||.
T Consensus 333 ~~~~sv~~gg~vtSl~ls~~-g~~lLsssRDdtl~viDlRt~eI-~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgs 410 (459)
T KOG0288|consen 333 DKTRSVPLGGRVTSLDLSMD-GLELLSSSRDDTLKVIDLRTKEI-RQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGS 410 (459)
T ss_pred ceeeEeecCcceeeEeeccC-CeEEeeecCCCceeeeecccccE-EEEeeccccccccccceeEECCCCceeeeccCCCc
Confidence 99999999999999999999 88888999999999999999873 4444321 2348999999 9999999999999
Q ss_pred EEEEecCCCcccccCCceEEEeCCCC--cEEEEEEecCCCEEEEEeCCCcEEEE
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTN--VKNFVGLSVWDGYVATGSETNEVFVY 820 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~--~v~~v~~sp~~~~lasgs~Dg~v~vw 820 (879)
|+||++.++ ++...++..+. .|++++|+|.|.++++++.++.+.+|
T Consensus 411 v~iW~v~tg------KlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 411 VYIWSVFTG------KLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EEEEEccCc------eEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 999999998 55555554433 59999999999999999999999999
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.2e-25 Score=237.48 Aligned_cols=202 Identities=14% Similarity=0.088 Sum_probs=148.0
Q ss_pred eecccccccCCCCCCccccccc-c---cCceEEEEeeCCcchhhhhcC-----CCCCCChhHHHHHHHHHHHHHHhhhhc
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA-A---IDPFVHAIEWGDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~-~---~~~~lv~e~~~g~sL~~~l~~-----~~~~l~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.+...+|++++..++ ++.... . ..++++++|+.+++|..++.. ....+++..++.++.||+.||+|||+.
T Consensus 54 ~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~ 132 (273)
T cd05074 54 CMKEFDHPNVIKLIG-VSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK 132 (273)
T ss_pred HHhcCCCCCcceEEE-EEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 455567888877766 443221 1 234788999999999887621 223578999999999999999999999
Q ss_pred CcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCccc
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
||+||||||+||+++.++.+|++|||.++.........
T Consensus 133 ~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~------------------------------------------ 170 (273)
T cd05074 133 NFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYR------------------------------------------ 170 (273)
T ss_pred CEeecccchhhEEEcCCCCEEECcccccccccCCccee------------------------------------------
Confidence 99999999999999999999999999987532110000
Q ss_pred ccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccccccCCCCCccCcchhHHHH
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDIwSlGvi 261 (879)
......+++.|++||.+.+..++.++|||||||+
T Consensus 171 ----------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~i 204 (273)
T cd05074 171 ----------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWAFGVT 204 (273)
T ss_pred ----------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHHHHHH
Confidence 0001133567999999988889999999999999
Q ss_pred HHHhhc----CCCCChhhHhHHhhhcccCCCchhhccChhhHHHHHHhcCCCCCCCCCHHHHhhc
Q 002801 262 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~ell~----pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~evl~h 322 (879)
+|||++ ||.... .......+............+..+.+++.+||..+|.+||++.++++.
T Consensus 205 l~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 205 MWEIMTRGQTPYAGVE-NSEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred HHHHhhCCCCCCCCCC-HHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999987 554332 222233232222222233456788999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >KOG0289 consensus mRNA splicing factor [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.1e-23 Score=215.47 Aligned_cols=269 Identities=19% Similarity=0.250 Sum_probs=230.7
Q ss_pred CceecccccCceEEEeecCcEEEEEeccccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEE
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~~~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
+-.++|..|..+-++|....++...++ ||.-.|+++.|+|+...+++++.|..|+||...... .+...
T Consensus 232 ~~ilTGG~d~~av~~d~~s~q~l~~~~-----Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s-------~~~~~ 299 (506)
T KOG0289|consen 232 SKILTGGEDKTAVLFDKPSNQILATLK-----GHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS-------EPTSS 299 (506)
T ss_pred CcceecCCCCceEEEecchhhhhhhcc-----CcceEEEEEEeccchhheeecCCcceEEeecccccc-------Ccccc
Confidence 455889999999999999988886654 899999999999999999999999999999876421 34455
Q ss_pred eccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEecc--CCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCC
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691 (879)
Q Consensus 614 ~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~~--h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~ 691 (879)
..|.++|+.+..+|. +.+|++++.||+....|++++.++..... ..-.+++..|+| ||.+|++|..|+.|+|||+.
T Consensus 300 ~~h~~~V~~ls~h~t-geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHp-DgLifgtgt~d~~vkiwdlk 377 (506)
T KOG0289|consen 300 RPHEEPVTGLSLHPT-GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHP-DGLIFGTGTPDGVVKIWDLK 377 (506)
T ss_pred ccccccceeeeeccC-CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcC-CceEEeccCCCceEEEEEcC
Confidence 679999999999995 99999999999999999999987765532 234599999999 99999999999999999999
Q ss_pred CCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEcc-CCCCEEEEEEc-CCCEEEEEEcCCc
Q 002801 692 QGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG-HNKTVSYVKFV-DATTLVSASTDNT 768 (879)
Q Consensus 692 ~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~-h~~~V~~v~fs-~~~~l~s~s~D~~ 768 (879)
++..+..|.. .++|..|+|+-+ |.+|+++..|+.|++||+|..+. +.++.. ....|.++.|. .|.+|+.++.|=+
T Consensus 378 s~~~~a~Fpght~~vk~i~FsEN-GY~Lat~add~~V~lwDLRKl~n-~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~ 455 (506)
T KOG0289|consen 378 SQTNVAKFPGHTGPVKAISFSEN-GYWLATAADDGSVKLWDLRKLKN-FKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQ 455 (506)
T ss_pred CccccccCCCCCCceeEEEeccC-ceEEEEEecCCeEEEEEehhhcc-cceeeccccccceeEEEcCCCCeEEeecceeE
Confidence 9998888875 577999999998 99999999999999999999874 555553 34579999998 9999999988877
Q ss_pred EEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEec
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 769 i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~ 822 (879)
|++++-.+... .++..+..|.+..+.|.|....+++++||.|..++++.+
T Consensus 456 Vy~~~k~~k~W----~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 456 VYICKKKTKSW----TEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred EEEEecccccc----eeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 77777555433 677888889989999999999999999999999988854
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=233.10 Aligned_cols=221 Identities=20% Similarity=0.238 Sum_probs=165.3
Q ss_pred ccccccccCCCC-----CcccccccCceeecccccccCCCCCCcccccccccCceEEEEeeCCcchhhhhcCCCCCCChh
Q 002801 8 GERFGVRGDDSN-----DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 8 ~~~~~~~~~~~~-----~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~sL~~~l~~~~~~l~~~ 82 (879)
|+.++++-.... ...|+.|... +...+|++++..++ .+.. ....+++|||+.+++|.+++.... .+++.
T Consensus 14 ~~~~~~k~~~~~~~~~~~~~~~~e~~~--~~~l~~~~i~~~~~-~~~~--~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~ 87 (244)
T smart00220 14 GKLVAIKVIKKEKIKKKRERILREISI--LKKLKHPNIVRLYD-VFED--EDKLYLVMEYCDGGDLFDLLKKRG-RLSED 87 (244)
T ss_pred CcEEEEEEecccccccHHHHHHHHHHH--HHhCCCCcHHHHHh-heee--CCEEEEEEeCCCCCCHHHHHHhcc-CCCHH
Confidence 455555543322 2344444332 23336777766555 3433 246799999999999999996543 38999
Q ss_pred HHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCCCCcccccccccccccCCCCCCcchhhhh
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
.+..++.+++.+|.|||+.||+|+||+|+||+++.++.++++|||.+.......
T Consensus 88 ~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-------------------------- 141 (244)
T smart00220 88 EARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-------------------------- 141 (244)
T ss_pred HHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--------------------------
Confidence 999999999999999999999999999999999999999999999986532110
Q ss_pred hhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccccccceeccc
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
......++..|+|||
T Consensus 142 -----------------------------------------------------------------~~~~~~~~~~~~~pE 156 (244)
T smart00220 142 -----------------------------------------------------------------LLTTFVGTPEYMAPE 156 (244)
T ss_pred -----------------------------------------------------------------ccccccCCcCCCCHH
Confidence 001236688899999
Q ss_pred cccCCCCCccCcchhHHHHHHHhhc---CCCCChhhHhHHhhhcccCCCchhhc--cChhhHHHHHHhcCCCCCCCCCHH
Q 002801 243 ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMG 317 (879)
Q Consensus 243 ~~~~~~~~~~sDIwSlGvil~ell~---pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rpt~~ 317 (879)
.+.+..++.++||||||+++|+|++ ||............+........... ....+.+++.+||..+|++||++.
T Consensus 157 ~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~ 236 (244)
T smart00220 157 VLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAE 236 (244)
T ss_pred HHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHH
Confidence 9988889999999999999999999 77553444444444444333322222 567889999999999999999999
Q ss_pred HHhhcccc
Q 002801 318 ELLQSEFL 325 (879)
Q Consensus 318 evl~hp~~ 325 (879)
++++||||
T Consensus 237 ~~~~~~~~ 244 (244)
T smart00220 237 EALQHPFF 244 (244)
T ss_pred HHhhCCCC
Confidence 99999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-25 Score=248.79 Aligned_cols=177 Identities=19% Similarity=0.215 Sum_probs=138.4
Q ss_pred cccccccccCCCCC---cccccccCceeecccccccCCCCCCccccccc----ccCceEEEEeeCCcchhhhhcCCC--C
Q 002801 7 RGERFGVRGDDSND---FELRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPK--R 77 (879)
Q Consensus 7 ~~~~~~~~~~~~~~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~g~sL~~~l~~~~--~ 77 (879)
.|+.++++--..-. .+-|-.++...+...+|+|+|..++ +.++.. ...+.++||||.||||+..|+++. .
T Consensus 37 tG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~-iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~ 115 (732)
T KOG4250|consen 37 TGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFD-IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAY 115 (732)
T ss_pred cccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcc-cCCccccCcccccceEEEeecCCCcHHHHhcCccccc
Confidence 35556665432211 1112235555667788999999888 665555 567899999999999999996543 4
Q ss_pred CCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeec--cCCC--eeeeecccccCCCCCCcccccccccccccCCCC
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 153 (879)
Q Consensus 78 ~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~--~~~~--vkl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (879)
.|++.+.+.++..++.||.|||++|||||||||.||++- .+|+ -||+|||.|+..+..+
T Consensus 116 GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----------------- 178 (732)
T KOG4250|consen 116 GLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----------------- 178 (732)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC-----------------
Confidence 699999999999999999999999999999999999994 3343 6999999999864331
Q ss_pred CCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccchhhcccccCCCCccccccc
Q 002801 154 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLM 233 (879)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 233 (879)
..++++
T Consensus 179 --------------------------------------------------------------------------~~~S~v 184 (732)
T KOG4250|consen 179 --------------------------------------------------------------------------LFTSLV 184 (732)
T ss_pred --------------------------------------------------------------------------eeeeec
Confidence 125579
Q ss_pred cccceeccccccC-CCCCccCcchhHHHHHHHhhc---CCCCChhh
Q 002801 234 ETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEK 275 (879)
Q Consensus 234 gt~~Y~aPE~~~~-~~~~~~sDIwSlGvil~ell~---pf~~~~~~ 275 (879)
||..|.+||++.. ..|+..+|.|||||++||+.| ||.+....
T Consensus 185 GT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~p 230 (732)
T KOG4250|consen 185 GTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGP 230 (732)
T ss_pred CchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCc
Confidence 9999999999984 779999999999999999999 77655443
|
|
| >KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=226.45 Aligned_cols=287 Identities=21% Similarity=0.326 Sum_probs=214.9
Q ss_pred EEEEEcC---CCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcC
Q 002801 572 CSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648 (879)
Q Consensus 572 ~~l~fsp---dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~ 648 (879)
.++.|++ ...+||.+..||.|.+||....... .........+.|...|..+.|-| ....|++.+.|.++++||+.
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr-~ee~~lk~~~aH~nAifDl~wap-ge~~lVsasGDsT~r~Wdvk 130 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFR-LEERQLKKPLAHKNAIFDLKWAP-GESLLVSASGDSTIRPWDVK 130 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcc-hhhhhhcccccccceeEeeccCC-CceeEEEccCCceeeeeeec
Confidence 4467765 3458999999999999998763322 11112234567999999999999 58899999999999999999
Q ss_pred CCeEEEE--eccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCc--------------------eEE-------EE
Q 002801 649 RSQVLTE--MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV--------------------SIG-------TI 699 (879)
Q Consensus 649 ~~~~~~~--~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~--------------------~i~-------~~ 699 (879)
+++++.. +.+|+..|-+++|.|.+...|++|+.||.|.|||++-.. +.. ..
T Consensus 131 ~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~ 210 (720)
T KOG0321|consen 131 TSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKW 210 (720)
T ss_pred cceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccc
Confidence 9988766 889999999999999999999999999999999986321 110 11
Q ss_pred ecC-----CceEEEEeeCCCCCEEEEEeC-CCeEEEEEcCCCcee-----eE--EEccC---CCCEEEEEEc-CCCEEEE
Q 002801 700 KTK-----ANVCCVQFPLDSGRSLAFGSA-DHRIYYYDLRNSKIP-----LC--TLIGH---NKTVSYVKFV-DATTLVS 762 (879)
Q Consensus 700 ~~~-----~~v~~v~~~p~~~~~l~tgs~-d~~I~iwDl~~~~~~-----~~--~~~~h---~~~V~~v~fs-~~~~l~s 762 (879)
..+ +.|+.+.| .| ...||+++. |+.|++||+|+...+ .. .+.-| .-.++++... .|.+|..
T Consensus 211 kA~s~ti~ssvTvv~f-kD-e~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~A 288 (720)
T KOG0321|consen 211 KAASNTIFSSVTVVLF-KD-ESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFA 288 (720)
T ss_pred ccccCceeeeeEEEEE-ec-cceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEE
Confidence 111 12444444 45 578888887 999999999986521 22 22223 1234444443 7788888
Q ss_pred EEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEE--EEecCCCEEEEEeCCCcEEEEecCCCCCceecccCCCCCCC
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV--GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLS 840 (879)
Q Consensus 763 ~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v--~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~ 840 (879)
.+.|+.|.+|++..... .++..+.++.+.-..+ ..+|++.+|++|+.|..+++|.+.....-...
T Consensus 289 sCtD~sIy~ynm~s~s~----sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~--------- 355 (720)
T KOG0321|consen 289 SCTDNSIYFYNMRSLSI----SPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPAL--------- 355 (720)
T ss_pred EecCCcEEEEeccccCc----CchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhh---------
Confidence 88899999999998754 6778888776644443 58999999999999999999999875432221
Q ss_pred CCCCCCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEe
Q 002801 841 GPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 841 ~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
..+|...|.+|+|.|....-++||+.|-.++||++
T Consensus 356 ---l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 356 ---LLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRL 390 (720)
T ss_pred ---hhCcceEEEEEeeccccCCCceeeccCcceEEEec
Confidence 25778889999999864334888899999999986
|
|
| >KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1e-23 Score=227.74 Aligned_cols=339 Identities=14% Similarity=0.193 Sum_probs=253.5
Q ss_pred cccccCCCCceecccccCceEEEeecCcEEEEEec-cccccCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcC
Q 002801 526 EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN 604 (879)
Q Consensus 526 ~~~~~~~~~~~~~~~~d~~i~~w~~~~~~~~~~l~-~~~l~~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~ 604 (879)
+.++-..+.++++|..||.|+.|+.....-..+-. ...+..|++.|+++...-+|+.|++|+.|.+|++|+......
T Consensus 30 Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~-- 107 (735)
T KOG0308|consen 30 LQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNT-- 107 (735)
T ss_pred ccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcc--
Confidence 33343345578999999999999877644332222 355678999999999999999999999999999999876420
Q ss_pred cccccceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCC--eEEEE--------ec-cCCCcEEEEEEecCCC
Q 002801 605 RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS--QVLTE--------MR-EHERRVWSIDFSSADP 673 (879)
Q Consensus 605 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~--~~~~~--------~~-~h~~~v~sv~~sp~~~ 673 (879)
.+....-.|..-|.|+++-..+...+|||+-|+.|.+||++++ +.+.. +. ++...|.+++.++ ++
T Consensus 108 ---~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~-t~ 183 (735)
T KOG0308|consen 108 ---FCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQ-TG 183 (735)
T ss_pred ---hhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCC-cc
Confidence 1111223488899999994446889999999999999999977 23322 22 6888999999999 89
Q ss_pred CEEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEE
Q 002801 674 TLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYV 752 (879)
Q Consensus 674 ~~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v 752 (879)
..+++|+..+.+++||.++.+.+..+.. ..+|.++-.+++ |..++++|.||+|++||++..++ +.++..|+..|.++
T Consensus 184 t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dD-Gt~~ls~sSDgtIrlWdLgqQrC-l~T~~vH~e~VWaL 261 (735)
T KOG0308|consen 184 TIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDD-GTRLLSASSDGTIRLWDLGQQRC-LATYIVHKEGVWAL 261 (735)
T ss_pred eEEEecCcccceEEeccccccceeeeeccccceEEEEEcCC-CCeEeecCCCceEEeeeccccce-eeeEEeccCceEEE
Confidence 9999999999999999999988888874 577999999999 89999999999999999998884 89999999999999
Q ss_pred EEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCCCCCceec
Q 002801 753 KFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 831 (879)
Q Consensus 753 ~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~~~~~~~~ 831 (879)
.-+ +=..+.+|+.|+.|..=|+++.. .+...+ ....+|..+..+.+.+-+-.++.|+.|+-|-......+...
T Consensus 262 ~~~~sf~~vYsG~rd~~i~~Tdl~n~~-----~~tlic-k~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s 335 (735)
T KOG0308|consen 262 QSSPSFTHVYSGGRDGNIYRTDLRNPA-----KSTLIC-KEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVS 335 (735)
T ss_pred eeCCCcceEEecCCCCcEEecccCCch-----hheEee-cCCCchhhhhhccccCCceeeeccccceecCCccccccccC
Confidence 888 77899999999999999999862 222322 34556777777766665677888999999976543322211
Q ss_pred ---ccCCCCC---CCC----CCC-CCCCCCEEEEEEeCCCCcEEEEEeCCCcEEEEEeC
Q 002801 832 ---NFNHADP---LSG----PET-DDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 832 ---~~~~~~~---~~~----~~~-~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~vw~lv 879 (879)
.+...+. ... +.. ...+..+..-+.-.|.+ .++|=..+|.+.+||++
T Consensus 336 ~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkR-hVlTkDa~gnv~lwDIl 393 (735)
T KOG0308|consen 336 GDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKR-HVLTKDAKGNVALWDIL 393 (735)
T ss_pred CCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcc-eEeeecCCCCEEEEEee
Confidence 0000000 000 000 11122233333445666 89999999999999985
|
|
| >KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-24 Score=205.87 Aligned_cols=252 Identities=20% Similarity=0.301 Sum_probs=201.0
Q ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEecCcccCcCcccccceEEeccCCCeeEEEE-eCCCCCeEEEeeCCCcEEE
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW-NSYIKSQIASSNFEGVVQV 644 (879)
Q Consensus 566 ~h~~~V~~l~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~l~~-~~~~~~~l~s~~~dg~V~v 644 (879)
.|.+.|.++..+--|+.||||+.|++||||....... ........+|.+++..++| +|.-+++|||+++||.|.|
T Consensus 9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~----s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIi 84 (299)
T KOG1332|consen 9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ----SKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVII 84 (299)
T ss_pred hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC----ceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEE
Confidence 7889999999999999999999999999999876322 1112223469999999999 5666999999999999999
Q ss_pred EEcCCCeE--EEEeccCCCcEEEEEEecCC-CCEEEEEeCCCcEEEEeCCCC-c-eEEE--EecCCceEEEEeeCCC--C
Q 002801 645 WDVSRSQV--LTEMREHERRVWSIDFSSAD-PTLLASGSDDGSVKLWSINQG-V-SIGT--IKTKANVCCVQFPLDS--G 715 (879)
Q Consensus 645 wd~~~~~~--~~~~~~h~~~v~sv~~sp~~-~~~lasgs~Dg~V~iwd~~~~-~-~i~~--~~~~~~v~~v~~~p~~--~ 715 (879)
|.-++++- ...+..|...|++|+|.|.+ +-+|++++.||.|.|.+.+.. . .... .-|.-.|++|+|.|.. |
T Consensus 85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g 164 (299)
T KOG1332|consen 85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPG 164 (299)
T ss_pred EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCc
Confidence 99888753 34456799999999999843 568999999999999998765 1 1112 2245679999999862 1
Q ss_pred -----------CEEEEEeCCCeEEEEEcCCCce-eeEEEccCCCCEEEEEEc-----CCCEEEEEEcCCcEEEEecCCCc
Q 002801 716 -----------RSLAFGSADHRIYYYDLRNSKI-PLCTLIGHNKTVSYVKFV-----DATTLVSASTDNTLKLWDLSMCT 778 (879)
Q Consensus 716 -----------~~l~tgs~d~~I~iwDl~~~~~-~~~~~~~h~~~V~~v~fs-----~~~~l~s~s~D~~i~lwd~~~~~ 778 (879)
+.|++|+.|..|+||+..+..- .-+++.+|...|..++|. .-.+|+|+|.||++.||-.+...
T Consensus 165 ~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~ 244 (299)
T KOG1332|consen 165 SLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEY 244 (299)
T ss_pred cccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCcc
Confidence 4599999999999999988652 234588999999999996 34689999999999999988543
Q ss_pred ccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeCCCcEEEEecCC
Q 002801 779 SRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 779 ~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~vw~~~~ 824 (879)
..+..+.+..| ...++.+.||+.|..|+.++.|+.|.+|.-..
T Consensus 245 e~wk~tll~~f---~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~ 287 (299)
T KOG1332|consen 245 EPWKKTLLEEF---PDVVWRVSWSLSGNILAVSGGDNKVTLWKENV 287 (299)
T ss_pred CcccccccccC---CcceEEEEEeccccEEEEecCCcEEEEEEeCC
Confidence 43444455543 46799999999999999999999999996543
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.9e-23 Score=233.57 Aligned_cols=245 Identities=16% Similarity=0.210 Sum_probs=199.7
Q ss_pred ccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCC--------------------------------C------------
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR--------------------------------S------------ 650 (879)
Q Consensus 615 ~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~--------------------------------~------------ 650 (879)
.|.+.|.++.|++ +|.+||+|+.||.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~-DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~ 343 (712)
T KOG0283|consen 265 AHKGAIWAMKFSH-DGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGS 343 (712)
T ss_pred ccCCcEEEEEeCC-CCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccccccc
Confidence 5899999999999 599999999999999998744 0
Q ss_pred ----------------eEEEEeccCCCcEEEEEEecCCCCEEEEEeCCCcEEEEeCCCCceEEEEecCCceEEEEeeCCC
Q 002801 651 ----------------QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDS 714 (879)
Q Consensus 651 ----------------~~~~~~~~h~~~v~sv~~sp~~~~~lasgs~Dg~V~iwd~~~~~~i~~~~~~~~v~~v~~~p~~ 714 (879)
+++..|.+|.+.|.++.||. .++|+++|-|.+|+||++....|+++|.|..-|+||+|+|.+
T Consensus 344 ~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSK--n~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaFnPvD 421 (712)
T KOG0283|consen 344 QSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSK--NNFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAFNPVD 421 (712)
T ss_pred CCccccCCCccccccccchhhhhccchhheeccccc--CCeeEeccccccEEeecCCCcceeeEEecCCeeEEEEecccC
Confidence 11344667999999999995 579999999999999999999999999999999999999999
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEE----
Q 002801 715 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF---- 789 (879)
Q Consensus 715 ~~~l~tgs~d~~I~iwDl~~~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~---- 789 (879)
.+||++|+-|+.|+||++...+ +.....-..-|++++|. ||+..+.|+.+|.+++|++........ ..+..-
T Consensus 422 DryFiSGSLD~KvRiWsI~d~~--Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~-~~I~~~~~Kk 498 (712)
T KOG0283|consen 422 DRYFISGSLDGKVRLWSISDKK--VVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSD-FHIRLHNKKK 498 (712)
T ss_pred CCcEeecccccceEEeecCcCe--eEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEe-eeEeeccCcc
Confidence 9999999999999999998877 33343444889999999 999999999999999999988643210 011110
Q ss_pred eCCCCcEEEEEEecCCC-EEEEEeCCCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEEeCCCCcEEEEEe
Q 002801 790 TGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAAN 868 (879)
Q Consensus 790 ~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~ 868 (879)
..|. .|+.+.|.|... -|+..|.|..|+|||......+..++-.+. ...=....|+.||. .|++++
T Consensus 499 ~~~~-rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n-----------~~SQ~~Asfs~Dgk-~IVs~s 565 (712)
T KOG0283|consen 499 KQGK-RITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRN-----------TSSQISASFSSDGK-HIVSAS 565 (712)
T ss_pred ccCc-eeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccccc-----------CCcceeeeEccCCC-EEEEee
Confidence 0122 699999998644 577778899999999988888887762211 11234567889999 999999
Q ss_pred CCCcEEEEEe
Q 002801 869 SSGNIKILEM 878 (879)
Q Consensus 869 ~Dg~I~vw~l 878 (879)
.|..|+||++
T Consensus 566 eDs~VYiW~~ 575 (712)
T KOG0283|consen 566 EDSWVYIWKN 575 (712)
T ss_pred cCceEEEEeC
Confidence 9999999985
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-26 Score=223.85 Aligned_cols=182 Identities=21% Similarity=0.279 Sum_probs=140.4
Q ss_pred CceEEEEeeCCcchhhhhcCCCCCCChhHHHHHHHHHHHHHHhhhhcCcccccCCCcceeeccCCCeeeeecccccCCCC
Q 002801 55 DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 134 (879)
Q Consensus 55 ~~~lv~e~~~g~sL~~~l~~~~~~l~~~~~~~i~~qi~~~l~~lHs~givHrDlKP~NIll~~~~~vkl~dfg~~~~~~~ 134 (879)
.+|++.|++ ..+|...|-.+ ..++.+.++-+++||++||.|||+.||.||||||.|.|++.+..+||||||+++..+.
T Consensus 131 EiYV~TELm-QSDLHKIIVSP-Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 131 ELYVLTELM-QSDLHKIIVSP-QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHH-HhhhhheeccC-CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccch
Confidence 468888888 66888888555 6799999999999999999999999999999999999999999999999999987432
Q ss_pred CCcccccccccccccCCCCCCcchhhhhhhhccccccccccCCCcccccccccccccccCcceeeccccccccccccccc
Q 002801 135 DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 214 (879)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 214 (879)
+...
T Consensus 209 d~~~---------------------------------------------------------------------------- 212 (449)
T KOG0664|consen 209 RDRL---------------------------------------------------------------------------- 212 (449)
T ss_pred hhhh----------------------------------------------------------------------------
Confidence 2110
Q ss_pred hhhcccccCCCCccccccccccceeccccccCCC-CCccCcchhHHHHHHHhhc---CCCCChhh--------------H
Q 002801 215 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEK--------------T 276 (879)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDIwSlGvil~ell~---pf~~~~~~--------------~ 276 (879)
.++..+-|.+|+|||+++|.. |+.+.||||.|||+.||+. -|...... .
T Consensus 213 -------------hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~ 279 (449)
T KOG0664|consen 213 -------------NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ 279 (449)
T ss_pred -------------hhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH
Confidence 234457799999999999976 9999999999999999998 33222111 1
Q ss_pred hHH---------hhhcccCCCchhhc---------cChhhHHHHHHhcCCCCCCCCCHHHHhhcccccC
Q 002801 277 RTM---------SSLRHRVLPPQLLL---------KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 277 ~~~---------~~~~~~~~~~~~~~---------~~~~~~~li~~~L~~dP~~Rpt~~evl~hp~~~~ 327 (879)
+.| ..++....+|.+.. .......++.++|..||.+|.+.++++.|+++.+
T Consensus 280 EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e 348 (449)
T KOG0664|consen 280 EAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEE 348 (449)
T ss_pred HHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccccc
Confidence 111 22333333333321 1234568899999999999999999999999764
|
|
| >KOG0294 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.6e-22 Score=201.61 Aligned_cols=266 Identities=14% Similarity=0.225 Sum_probs=203.6
Q ss_pred EEEEeCCCcEEEEecCcccCcCccccc-----ceEEeccCCCeeEEEEeCCCCCeEEEeeCCCcEEEEEcCCCeEEEEec
Q 002801 583 FAAAGVNKKIKVFECDAIINENRDIHY-----PVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR 657 (879)
Q Consensus 583 lat~~~dg~I~iwd~~~~~~~~~~~~~-----~~~~~~~~~~i~~l~~~~~~~~~l~s~~~dg~V~vwd~~~~~~~~~~~ 657 (879)
|++|++...|.-|++........+... ......|.+.|++++.+ +.+++||+.|-+|+|||+.+...+..+-
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs---~~~~aSGssDetI~IYDm~k~~qlg~ll 80 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS---GPYVASGSSDETIHIYDMRKRKQLGILL 80 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec---ceeEeccCCCCcEEEEeccchhhhccee
Confidence 556777666666666542211111111 12234589999999986 7899999999999999999998888888
Q ss_pred cCCCcEEEEEEecCCCC--EEEEEeCCCcEEEEeCCCCceEEEEec-CCceEEEEeeCCCCCEEEEEeCCCeEEEEEcCC
Q 002801 658 EHERRVWSIDFSSADPT--LLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRN 734 (879)
Q Consensus 658 ~h~~~v~sv~~sp~~~~--~lasgs~Dg~V~iwd~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~d~~I~iwDl~~ 734 (879)
.|.+.|+++.|.+ .-. .|++|++||.|.+|+......+.+++. .+.|+.++.||. +++.++.+.|+.++.||+-+
T Consensus 81 ~HagsitaL~F~~-~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS-~KLALsVg~D~~lr~WNLV~ 158 (362)
T KOG0294|consen 81 SHAGSITALKFYP-PLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPS-GKLALSVGGDQVLRTWNLVR 158 (362)
T ss_pred ccccceEEEEecC-CcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCC-CceEEEEcCCceeeeehhhc
Confidence 9999999999987 443 899999999999999999999999985 556999999999 89999999999999999988
Q ss_pred CceeeEEEccCCCCEEEEEEc-CCCEEEEEEcCCcEEEEecCCCcccccCCceEEEeCCCCcEEEEEEecCCCEEEEEeC
Q 002801 735 SKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSE 813 (879)
Q Consensus 735 ~~~~~~~~~~h~~~V~~v~fs-~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~ 813 (879)
++.....-..+ .-+.|.|+ .|.+++.++.+ .|-+|.+.+.. ....+. ....+.++-|- ++.+|++|++
T Consensus 159 Gr~a~v~~L~~--~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~------v~~~i~-~~~r~l~~~~l-~~~~L~vG~d 227 (362)
T KOG0294|consen 159 GRVAFVLNLKN--KATLVSWSPQGDHFVVSGRN-KIDIYQLDNAS------VFREIE-NPKRILCATFL-DGSELLVGGD 227 (362)
T ss_pred CccceeeccCC--cceeeEEcCCCCEEEEEecc-EEEEEecccHh------Hhhhhh-ccccceeeeec-CCceEEEecC
Confidence 87422221122 23459999 88888877765 58899988752 222221 11335555554 5779999999
Q ss_pred CCcEEEEecCCCCCceecccCCCCCCCCCCCCCCCCCEEEEEE--eCCCCcEEEEEeCCCcEEEEEe
Q 002801 814 TNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCW--RGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 814 Dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~--~p~~~~~l~s~~~Dg~I~vw~l 878 (879)
|+.|.+||-....+...+ .+|...|-++.+ +|++. +|+|+++||.|+|||+
T Consensus 228 ~~~i~~~D~ds~~~~~~~-------------~AH~~RVK~i~~~~~~~~~-~lvTaSSDG~I~vWd~ 280 (362)
T KOG0294|consen 228 NEWISLKDTDSDTPLTEF-------------LAHENRVKDIASYTNPEHE-YLVTASSDGFIKVWDI 280 (362)
T ss_pred CceEEEeccCCCccceee-------------ecchhheeeeEEEecCCce-EEEEeccCceEEEEEc
Confidence 999999999876655443 578888999984 46677 9999999999999996
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 879 | ||||
| 3mxx_A | 315 | Crystal Structure Of Wdr5 Mutant (S62a) Length = 31 | 7e-16 | ||
| 2cnx_A | 315 | Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2. | 7e-16 | ||
| 2xl2_A | 334 | Wdr5 In Complex With An Rbbp5 Peptide Recruited To | 1e-15 | ||
| 2gnq_A | 336 | Structure Of Wdr5 Length = 336 | 1e-15 | ||
| 3emh_A | 318 | Structural Basis Of Wdr5-Mll Interaction Length = 3 | 1e-15 | ||
| 3n0d_A | 315 | Crystal Structure Of Wdr5 Mutant (W330f) Length = 3 | 1e-15 | ||
| 2h9l_A | 329 | Wdr5delta23 Length = 329 | 2e-15 | ||
| 4a7j_A | 318 | Symmetric Dimethylation Of H3 Arginine 2 Is A Novel | 2e-15 | ||
| 3n0e_A | 315 | Crystal Structure Of Wdr5 Mutant (W330y) Length = 3 | 2e-15 | ||
| 2g99_A | 308 | Structural Basis For The Specific Recognition Of Me | 2e-15 | ||
| 3smr_A | 312 | Crystal Structure Of Human Wd Repeat Domain 5 With | 2e-15 | ||
| 3psl_A | 318 | Fine-Tuning The Stimulation Of Mll1 Methyltransfera | 2e-15 | ||
| 2h9m_A | 313 | Wdr5 In Complex With Unmodified H3k4 Peptide Length | 2e-15 | ||
| 2h68_A | 312 | Histone H3 Recognition And Presentation By The Wdr5 | 2e-15 | ||
| 2h13_A | 317 | Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length | 2e-15 | ||
| 2g9a_A | 311 | Structural Basis For The Specific Recognition Of Me | 2e-15 | ||
| 2co0_A | 315 | Wdr5 And Unmodified Histone H3 Complex At 2.25 Angs | 3e-15 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 8e-14 | ||
| 2ymu_A | 577 | Structure Of A Highly Repetitive Propeller Structur | 6e-08 | ||
| 1erj_A | 393 | Crystal Structure Of The C-Terminal Wd40 Domain Of | 2e-12 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 3e-12 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 3e-11 | ||
| 3iza_B | 1263 | Structure Of An Apoptosome-Procaspase-9 Card Comple | 5e-10 | ||
| 3shf_A | 1256 | Crystal Structure Of The R265s Mutant Of Full-Lengt | 9e-10 | ||
| 3sfz_A | 1249 | Crystal Structure Of Full-Length Murine Apaf-1 Leng | 1e-09 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 8e-09 | ||
| 3zey_7 | 318 | High-resolution Cryo-electron Microscopy Structure | 2e-04 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 1e-08 | ||
| 2ovp_B | 445 | Structure Of The Skp1-Fbw7 Complex Length = 445 | 4e-08 | ||
| 2yno_A | 310 | Yeast Betaprime Cop 1-304h6 Length = 310 | 7e-08 | ||
| 2ynn_A | 304 | Yeast Betaprime Cop 1-304 With Ktktn Motif Length = | 7e-08 | ||
| 3mkq_A | 814 | Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subco | 9e-08 | ||
| 1p22_A | 435 | Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex | 1e-07 | ||
| 2ynp_A | 604 | Yeast Betaprime Cop 1-604 With Ktktn Motif Length = | 1e-07 | ||
| 3dm0_A | 694 | Maltose Binding Protein Fusion With Rack1 From A. T | 2e-07 | ||
| 3cfv_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-07 | ||
| 3cfs_B | 414 | Structural Basis Of The Interaction Of Rbap46RBAP48 | 2e-07 | ||
| 3gfc_A | 425 | Crystal Structure Of Histone-Binding Protein Rbbp4 | 3e-07 | ||
| 2pbi_B | 354 | The Multifunctional Nature Of Gbeta5RGS9 REVEALED F | 8e-07 | ||
| 3ow8_A | 321 | Crystal Structure Of The Wd Repeat-Containing Prote | 9e-07 | ||
| 2xyi_A | 430 | Crystal Structure Of Nurf55 In Complex With A H4 Pe | 1e-06 | ||
| 2yba_A | 422 | Crystal Structure Of Nurf55 In Complex With Histone | 1e-06 | ||
| 3c99_A | 432 | Structural Basis Of Histone H4 Recognition By P55 L | 1e-06 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 2e-06 | ||
| 1vyh_C | 410 | Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | 2e-05 | ||
| 2zkq_a | 317 | Structure Of A Mammalian Ribosomal 40s Subunit With | 8e-06 | ||
| 4aow_A | 340 | Crystal Structure Of The Human Rack1 Protein At A R | 8e-06 | ||
| 4a11_B | 408 | Structure Of The Hsddb1-Hscsa Complex Length = 408 | 2e-05 | ||
| 1gg2_B | 340 | G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Bet | 2e-05 | ||
| 3sn6_B | 351 | Crystal Structure Of The Beta2 Adrenergic Receptor- | 2e-05 | ||
| 2bcj_B | 340 | Crystal Structure Of G Protein-coupled Receptor Kin | 2e-05 | ||
| 1nex_B | 464 | Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Comp | 2e-05 | ||
| 3mks_B | 464 | Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH | 2e-05 | ||
| 4ggd_A | 431 | Structural Analysis Of Human Cdc20 Supports Multisi | 3e-05 | ||
| 1got_B | 340 | Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimer | 3e-05 | ||
| 1a0r_B | 340 | Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA- | 3e-05 | ||
| 4gga_A | 420 | Structural Analysis Of Human Cdc20 Supports Multi-S | 3e-05 | ||
| 4ggc_A | 318 | Structural Analysis Of Human Cdc20 Supports Multi-S | 2e-04 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-04 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 3e-04 | ||
| 3rfg_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 3e-04 | ||
| 1trj_A | 314 | Homology Model Of Yeast Rack1 Protein Fitted Into 1 | 3e-04 | ||
| 3jyv_R | 313 | Structure Of The 40s Rrna And Proteins And PE TRNA | 3e-04 | ||
| 3izb_a | 319 | Localization Of The Small Subunit Ribosomal Protein | 4e-04 | ||
| 3rfh_A | 319 | Crystal Structure Of The Yeast Rack1 Dimer In Space | 4e-04 | ||
| 3frx_A | 319 | Crystal Structure Of The Yeast Orthologue Of Rack1, | 8e-04 |
| >pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a) Length = 315 | Back alignment and structure |
|
| >pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel Site Length = 334 | Back alignment and structure |
|
| >pdb|2GNQ|A Chain A, Structure Of Wdr5 Length = 336 | Back alignment and structure |
|
| >pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction Length = 318 | Back alignment and structure |
|
| >pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f) Length = 315 | Back alignment and structure |
|
| >pdb|2H9L|A Chain A, Wdr5delta23 Length = 329 | Back alignment and structure |
|
| >pdb|4A7J|A Chain A, Symmetric Dimethylation Of H3 Arginine 2 Is A Novel Histone Mark That Supports Euchromatin Maintenance Length = 318 | Back alignment and structure |
|
| >pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y) Length = 315 | Back alignment and structure |
|
| >pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 308 | Back alignment and structure |
|
| >pdb|3SMR|A Chain A, Crystal Structure Of Human Wd Repeat Domain 5 With Compound Length = 312 | Back alignment and structure |
|
| >pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3 Based Peptide Mimetic Length = 318 | Back alignment and structure |
|
| >pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide Length = 313 | Back alignment and structure |
|
| >pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module Of The Mll1 Complex Length = 312 | Back alignment and structure |
|
| >pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX Length = 317 | Back alignment and structure |
|
| >pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5 Length = 311 | Back alignment and structure |
|
| >pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom Length = 315 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|2YMU|A Chain A, Structure Of A Highly Repetitive Propeller Structure Length = 577 | Back alignment and structure |
|
| >pdb|1ERJ|A Chain A, Crystal Structure Of The C-Terminal Wd40 Domain Of Tup1 Length = 393 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|3SHF|A Chain A, Crystal Structure Of The R265s Mutant Of Full-Length Murine Apaf-1 Length = 1256 | Back alignment and structure |
|
| >pdb|3SFZ|A Chain A, Crystal Structure Of Full-Length Murine Apaf-1 Length = 1249 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|3ZEY|7 Chain 7, High-resolution Cryo-electron Microscopy Structure Of The Trypanosoma Brucei Ribosome Length = 318 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2OVP|B Chain B, Structure Of The Skp1-Fbw7 Complex Length = 445 | Back alignment and structure |
|
| >pdb|2YNO|A Chain A, Yeast Betaprime Cop 1-304h6 Length = 310 | Back alignment and structure |
|
| >pdb|2YNN|A Chain A, Yeast Betaprime Cop 1-304 With Ktktn Motif Length = 304 | Back alignment and structure |
|
| >pdb|3MKQ|A Chain A, Crystal Structure Of Yeast AlphaBETAPRIME-Cop Subcomplex Of The Copi Vesicular Coat Length = 814 | Back alignment and structure |
|
| >pdb|1P22|A Chain A, Structure Of A Beta-Trcp1-Skp1-Beta-Catenin Complex: Destruction Motif Binding And Lysine Specificity On The Scfbeta-Trcp1 Ubiquitin Ligase Length = 435 | Back alignment and structure |
|
| >pdb|2YNP|A Chain A, Yeast Betaprime Cop 1-604 With Ktktn Motif Length = 604 | Back alignment and structure |
|
| >pdb|3DM0|A Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana Length = 694 | Back alignment and structure |
|
| >pdb|3CFV|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3CFS|B Chain B, Structural Basis Of The Interaction Of Rbap46RBAP48 WITH Histone H4 Length = 414 | Back alignment and structure |
|
| >pdb|3GFC|A Chain A, Crystal Structure Of Histone-Binding Protein Rbbp4 Length = 425 | Back alignment and structure |
|
| >pdb|2PBI|B Chain B, The Multifunctional Nature Of Gbeta5RGS9 REVEALED FROM ITS CRYSTAL Structure Length = 354 | Back alignment and structure |
|
| >pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61 Length = 321 | Back alignment and structure |
|
| >pdb|2XYI|A Chain A, Crystal Structure Of Nurf55 In Complex With A H4 Peptide Length = 430 | Back alignment and structure |
|
| >pdb|2YBA|A Chain A, Crystal Structure Of Nurf55 In Complex With Histone H3 Length = 422 | Back alignment and structure |
|
| >pdb|3C99|A Chain A, Structural Basis Of Histone H4 Recognition By P55 Length = 432 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|1VYH|C Chain C, Paf-Ah Holoenzyme: Lis1ALFA2 Length = 410 | Back alignment and structure |
|
| >pdb|2ZKQ|AA Chain a, Structure Of A Mammalian Ribosomal 40s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 317 | Back alignment and structure |
|
| >pdb|4AOW|A Chain A, Crystal Structure Of The Human Rack1 Protein At A Resolution Of 2.45 Angstrom Length = 340 | Back alignment and structure |
|
| >pdb|4A11|B Chain B, Structure Of The Hsddb1-Hscsa Complex Length = 408 | Back alignment and structure |
|
| >pdb|1GG2|B Chain B, G Protein Heterotrimer Mutant Gi_alpha_1(G203a) Beta_1 Gamma_2 With Gdp Bound Length = 340 | Back alignment and structure |
|
| >pdb|3SN6|B Chain B, Crystal Structure Of The Beta2 Adrenergic Receptor-Gs Protein Complex Length = 351 | Back alignment and structure |
|
| >pdb|2BCJ|B Chain B, Crystal Structure Of G Protein-coupled Receptor Kinase 2 In Complex With Galpha-q And Gbetagamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1NEX|B Chain B, Crystal Structure Of Scskp1-Sccdc4-Cpd Peptide Complex Length = 464 | Back alignment and structure |
|
| >pdb|3MKS|B Chain B, Crystal Structure Of Yeast Cdc4SKP1 IN COMPLEX WITH AN ALLOSTERIC Inhibitor Scf-I2 Length = 464 | Back alignment and structure |
|
| >pdb|4GGD|A Chain A, Structural Analysis Of Human Cdc20 Supports Multisite Degron Recognition By ApcC. Length = 431 | Back alignment and structure |
|
| >pdb|1GOT|B Chain B, Heterotrimeric Complex Of A Gt-AlphaGI-Alpha Chimera And The Gt-Beta-Gamma Subunits Length = 340 | Back alignment and structure |
|
| >pdb|1A0R|B Chain B, Heterotrimeric Complex Of PhosducinTRANSDUCIN BETA-Gamma Length = 340 | Back alignment and structure |
|
| >pdb|4GGA|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 420 | Back alignment and structure |
|
| >pdb|4GGC|A Chain A, Structural Analysis Of Human Cdc20 Supports Multi-Site Degron Recognition By ApcC Length = 318 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|3RFG|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P63 Length = 319 | Back alignment and structure |
|
| >pdb|1TRJ|A Chain A, Homology Model Of Yeast Rack1 Protein Fitted Into 11.7a Cryo-em Map Of Yeast 80s Ribosome Length = 314 | Back alignment and structure |
|
| >pdb|3JYV|R Chain R, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 313 | Back alignment and structure |
|
| >pdb|3IZB|AA Chain a, Localization Of The Small Subunit Ribosomal Proteins Into A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae Translating 80s Ribosome Length = 319 | Back alignment and structure |
|
| >pdb|3RFH|A Chain A, Crystal Structure Of The Yeast Rack1 Dimer In Space Group P21 Length = 319 | Back alignment and structure |
|
| >pdb|3FRX|A Chain A, Crystal Structure Of The Yeast Orthologue Of Rack1, Asc1. Length = 319 | Back alignment and structure |
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 879 | ||||
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 2e-22 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-16 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 3e-14 | |
| d1tbga_ | 340 | b.69.4.1 (A:) beta1-subunit of the signal-transduc | 8e-09 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-21 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 7e-19 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-15 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 2e-15 | |
| d1vyhc1 | 317 | b.69.4.1 (C:92-408) Platelet-activating factor ace | 1e-13 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-19 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 2e-18 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 1e-14 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 3e-11 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 2e-16 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 3e-14 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 5e-07 | |
| d1p22a2 | 293 | b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (be | 5e-06 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 9e-13 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 1e-12 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-12 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 8e-12 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 1e-11 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 2e-11 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 6e-07 | |
| d1sq9a_ | 393 | b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Bake | 3e-06 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 3e-11 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 3e-11 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 3e-11 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 5e-11 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-10 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-05 | |
| d2ovrb2 | 342 | b.69.4.1 (B:2365-2706) F-box/WD repeat-containing | 1e-04 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 3e-11 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 6e-09 | |
| d1gxra_ | 337 | b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Hum | 1e-04 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 4e-11 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 0.003 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 4e-11 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 8e-11 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 4e-08 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 2e-05 | |
| d1pgua2 | 287 | b.69.4.1 (A:327-613) Actin interacting protein 1 { | 5e-05 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 9e-11 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 5e-08 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 2e-06 | |
| d1yfqa_ | 342 | b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Bake | 7e-05 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 1e-10 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-10 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 2e-08 | |
| d1k8kc_ | 371 | b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 | 8e-06 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 2e-10 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 3e-10 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 4e-10 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 5e-10 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 7e-10 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-09 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-09 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 1e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 1e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 1e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 0.002 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 3e-09 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 3e-09 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 3e-09 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 4e-09 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 5e-09 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 1e-08 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 3e-06 | |
| d1k32a3 | 360 | b.69.9.1 (A:320-679) Tricorn protease domain 2 {Ar | 0.001 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 6e-09 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 6e-09 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 7e-09 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 8e-09 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 1e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 1e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 9e-08 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 5e-07 | |
| d1pgua1 | 325 | b.69.4.1 (A:2-326) Actin interacting protein 1 {Ba | 8e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 1e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-08 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 4e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-07 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 2e-06 | |
| d1nexb2 | 355 | b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker' | 6e-05 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-08 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 1e-07 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 8e-07 | |
| d1nr0a2 | 299 | b.69.4.1 (A:313-611) Actin interacting protein 1 { | 2e-05 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 2e-08 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 3e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-08 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-07 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 1e-06 | |
| d1jmxb_ | 346 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 9e-05 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 5e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 6e-08 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 8e-08 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 1e-07 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 2e-07 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 2e-07 | |
| d1qksa2 | 432 | b.70.2.1 (A:136-567) C-terminal (heme d1) domain o | 2e-06 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 2e-07 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 2e-07 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 3e-07 | |
| d2bbkh_ | 355 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 0.001 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 3e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 4e-07 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 1e-06 | |
| d1nr0a1 | 311 | b.69.4.1 (A:2-312) Actin interacting protein 1 {Ne | 1e-04 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 4e-07 | |
| d1pbyb_ | 337 | b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase | 3e-06 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 4e-07 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 6e-07 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 8e-06 | |
| d1hzua2 | 426 | b.70.2.1 (A:118-543) C-terminal (heme d1) domain o | 0.004 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 1e-06 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 6e-04 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 2e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 3e-06 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 3e-06 | |
| d1mdah_ | 368 | b.69.2.1 (H:) Methylamine dehydrogenase, H-chain { | 1e-04 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 4e-06 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 5e-06 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 5e-06 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 5e-06 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 6e-06 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 9e-06 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 9e-06 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 1e-05 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 2e-05 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 2e-05 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 3e-05 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 2e-04 | |
| d1l0qa2 | 301 | b.69.2.3 (A:1-301) Surface layer protein {Archaeon | 2e-04 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 3e-05 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 4e-05 | |
| d1ri6a_ | 333 | b.69.11.1 (A:) Putative isomerase YbhE {Escherichi | 0.003 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 4e-05 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 5e-05 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 9e-05 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-04 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 3e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 7e-04 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 97.1 bits (240), Expect = 2e-22
Identities = 33/154 (21%), Positives = 57/154 (37%), Gaps = 7/154 (4%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
+ S + ++WDV HE + +I F + A+GSDD
Sbjct: 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDA 248
Query: 684 SVKL---WSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLC 740
+ +L + + ++ + V F GR L G D +D +
Sbjct: 249 TCRLFDLRADQELMTYSHDNIICGITSVSFSKS-GRLLLAGYDDFNCNVWDALKAD-RAG 306
Query: 741 TLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWD 773
L GH+ VS + D + + S D+ LK+W+
Sbjct: 307 VLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 79.0 bits (193), Expect = 3e-16
Identities = 22/136 (16%), Positives = 52/136 (38%), Gaps = 11/136 (8%)
Query: 558 DLNQGDLLNS----SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613
D+ +G + + + ++ F +G FA + ++F+
Sbjct: 212 DVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR-----ADQELMTYSH 266
Query: 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADP 673
++S+ + S + + + VWD ++ + H+ RV + + D
Sbjct: 267 DNIICGITSVSF-SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTD-DG 324
Query: 674 TLLASGSDDGSVKLWS 689
+A+GS D +K+W+
Sbjct: 325 MAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 72.5 bits (176), Expect = 3e-14
Identities = 42/290 (14%), Positives = 97/290 (33%), Gaps = 46/290 (15%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFE------------------CDAIINENRDIHYPVV 612
+ ++ + D L +A + K+ +++ A + +
Sbjct: 58 IYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL 117
Query: 613 EMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSAD 672
+ + S+ + + + + +Q++T + +W I+
Sbjct: 118 DNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQT 177
Query: 673 PT------------------LLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLD 713
T L SG+ D S KLW + +G+ T ++++ + F +
Sbjct: 178 TTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPN 237
Query: 714 SGRSLAFGSADHRIY-YYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKL 771
G + A GS D + + ++ + ++ V F L++ D +
Sbjct: 238 -GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296
Query: 772 WDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821
WD GH N + +G++ VATGS + + +++
Sbjct: 297 WDALKA------DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} Length = 340 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.9 bits (133), Expect = 8e-09
Identities = 45/293 (15%), Positives = 88/293 (30%), Gaps = 66/293 (22%)
Query: 630 KSQIASSNFEGVVQVWDVSRSQVLTE--MREHERRVWSIDFSSADPTLLASGSDDGSVKL 687
K+ ++ + + V R Q+ T +R H +++++ + + D LL S S DG + +
Sbjct: 23 KACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLII 81
Query: 688 WSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSA----------------------- 723
W + I + V + G
Sbjct: 82 WDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAG 141
Query: 724 ---------------------DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVS 762
D +D+ + +S D VS
Sbjct: 142 HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201
Query: 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822
+ D + KLWD+ +FTGH + N + ATGS+ ++
Sbjct: 202 GACDASAKLWDVREGM------CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDL 255
Query: 823 AFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875
++++ ++ I+SV + +S L+A N +
Sbjct: 256 RADQELMTYSHDNII-----------CGITSVSF-SKSGRLLLAGYDDFNCNV 296
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 94.8 bits (234), Expect = 1e-21
Identities = 56/305 (18%), Positives = 100/305 (32%), Gaps = 63/305 (20%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFE---------------------------------- 596
V + F + +A + IKV++
Sbjct: 20 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 79
Query: 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM 656
I + + M S I S++ + +++W+V +
Sbjct: 80 DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 139
Query: 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVC-CVQFPLDS- 714
H V + + D TL+AS S+D +V++W + ++ +V C+ + +S
Sbjct: 140 TGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESS 198
Query: 715 ------------------GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV- 755
G L GS D I +D+ L TL+GH+ V V F
Sbjct: 199 YSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVLFHS 257
Query: 756 DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETN 815
++S + D TL++WD + + H + + YV TGS
Sbjct: 258 GGKFILSCADDKTLRVWDYKN------KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ 311
Query: 816 EVFVY 820
V V+
Sbjct: 312 TVKVW 316
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 86.3 bits (212), Expect = 7e-19
Identities = 44/187 (23%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667
Y V + + + + IAS + + V+VW V+ + E+REH V I
Sbjct: 133 GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECIS 192
Query: 668 F-------------------SSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCC 707
+ S L SGS D ++K+W ++ G+ + T+ V
Sbjct: 193 WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 252
Query: 708 VQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKF-VDATTLVSASTD 766
V F G+ + + D + +D +N + + TL H V+ + F A +V+ S D
Sbjct: 253 VLFHSG-GKFILSCADDKTLRVWDYKNKR-CMKTLNAHEHFVTSLDFHKTAPYVVTGSVD 310
Query: 767 NTLKLWD 773
T+K+W+
Sbjct: 311 QTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 76.7 bits (187), Expect = 1e-15
Identities = 32/173 (18%), Positives = 69/173 (39%), Gaps = 15/173 (8%)
Query: 572 CSLSFDRDGELFAAAGVNKKIKVF-----ECDAIINENRDIHYPVVEMASRSKLSSICWN 626
+ ++DG L A+ ++ ++V+ EC A + E+R + + S S
Sbjct: 147 RMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEAT 206
Query: 627 SYIKSQ-------IASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASG 679
+ + S + + +++WDVS L + H+ V + F S + S
Sbjct: 207 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHS-GGKFILSC 265
Query: 680 SDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYD 731
+DD ++++W + T+ + V + F + GS D + ++
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT-APYVVTGSVDQTVKVWE 317
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 76.3 bits (186), Expect = 2e-15
Identities = 45/321 (14%), Positives = 97/321 (30%), Gaps = 84/321 (26%)
Query: 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSI---------- 666
RS ++ + ++ S + S++ + ++VWD ++ H V I
Sbjct: 17 RSPVTRVIFHPV-FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 75
Query: 667 -------------------------------DFSSADPTLLASGSDDGSVKLWSINQGVS 695
+ + S S D ++K+W + G
Sbjct: 76 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC 135
Query: 696 IGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV 755
+ T + P G +A S D + + + + L H V + +
Sbjct: 136 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-CKAELREHRHVVECISWA 194
Query: 756 ---------------------DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 794
L+S S D T+K+WD+S L + GH N
Sbjct: 195 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST------GMCLMTLVGHDN 248
Query: 795 VKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSV 854
V ++ + ++ + V+ + N H ++S+
Sbjct: 249 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AHEHF------------VTSL 295
Query: 855 CWRGQSSNTLVAANSSGNIKI 875
+ +++ +V + +K+
Sbjct: 296 DFH-KTAPYVVTGSVDQTVKV 315
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} Length = 317 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Score = 70.9 bits (172), Expect = 1e-13
Identities = 45/240 (18%), Positives = 84/240 (35%), Gaps = 14/240 (5%)
Query: 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKAN 704
W + + H V + F +++ S S+D ++K+W G T+K +
Sbjct: 3 WIPRPPEKYA-LSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60
Query: 705 VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSAS 764
SG+ LA SAD I +D + + + S + +VSAS
Sbjct: 61 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 120
Query: 765 TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 824
D T+K+W++ + +FTGH V + +A+ S V V+ A
Sbjct: 121 RDKTIKMWEVQTG------YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT 174
Query: 825 PMPALSFNFNHADPLS------GPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878
+ + + S G+ L++ + IK+ ++
Sbjct: 175 KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 234
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 89.1 bits (219), Expect = 2e-19
Identities = 74/404 (18%), Positives = 141/404 (34%), Gaps = 46/404 (11%)
Query: 495 PLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 554
LV ++Q ++ + P + + S + + + + + NP L
Sbjct: 2 YLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILY-NP------------ALP 48
Query: 555 VKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINEN 604
+ D+ L+ +++VC + F DGE A + D+ N++
Sbjct: 49 REIDVELHKSLDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKD 108
Query: 605 RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVW 664
+ +S + S+C++ K + + +R V+ +
Sbjct: 109 PENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYS 168
Query: 665 SIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSAD 724
F L SGS D +V++W + G T+ + V V G+ +A GS D
Sbjct: 169 LDYFP--SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLD 226
Query: 725 HRIYYYDLRNSKI------PLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDL--- 774
+ +D + + GH +V V F D ++VS S D ++KLW+L
Sbjct: 227 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 286
Query: 775 ---SMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSF 831
S + T ++ GH + V + D Y+ +GS+ V + K P L
Sbjct: 287 NNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML 346
Query: 832 NFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875
H + + + + G N + +I
Sbjct: 347 Q-GHRNSVI------SVAVANGSSL-GPEYNVFATGSGDCKARI 382
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 86.4 bits (212), Expect = 2e-18
Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 30/207 (14%)
Query: 595 FECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLT 654
+ + + ++ ++++ + IA+ + + V+VWD ++
Sbjct: 182 SGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 241
Query: 655 EMRE-------HERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT------ 701
+ H+ V+S+ F+ D + SGS D SVKLW++ + KT
Sbjct: 242 RLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 702 -------KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKF 754
K V V + + GS D + ++D ++ PL L GH +V V
Sbjct: 301 EVTYIGHKDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGN-PLLMLQGHRNSVISVAV 358
Query: 755 V-------DATTLVSASTDNTLKLWDL 774
+ + S D ++W
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARIWKY 385
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 74.1 bits (180), Expect = 1e-14
Identities = 23/132 (17%), Positives = 49/132 (37%), Gaps = 11/132 (8%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFECD-----AIINENRDIHYPVVEMASRSKLSSICW 625
V S+ F RDG+ + +++ +K++ + V + + + S+
Sbjct: 257 VYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 316
Query: 626 NSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS-----SADPTLLASGS 680
I S + + V WD L ++ H V S+ + + + A+GS
Sbjct: 317 TQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375
Query: 681 DDGSVKLWSINQ 692
D ++W +
Sbjct: 376 GDCKARIWKYKK 387
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 64.0 bits (154), Expect = 3e-11
Identities = 27/176 (15%), Positives = 64/176 (36%), Gaps = 20/176 (11%)
Query: 576 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS 635
DG+ AA +++ ++V++ + R + + S+ + + + S
Sbjct: 213 SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF-TRDGQSVVS 271
Query: 636 SNFEGVVQVWDVSRSQVLTEM------------REHERRVWSIDFSSADPTLLASGSDDG 683
+ + V++W++ + ++ H+ V S+ + + + SGS D
Sbjct: 272 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDR 330
Query: 684 SVKLWSINQGVSIGTIKT-KANVCCVQFPLDS-----GRSLAFGSADHRIYYYDLR 733
V W G + ++ + +V V S A GS D + + +
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 78.4 bits (191), Expect = 2e-16
Identities = 35/161 (21%), Positives = 77/161 (47%), Gaps = 14/161 (8%)
Query: 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680
+++ + I S++ + ++VW+ S + + + H+R + + + L+ SGS
Sbjct: 139 AAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR---DRLVVSGS 195
Query: 681 DDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK---- 736
D +++LW I G + ++ + + + + G+ D +I +DL +
Sbjct: 196 SDNTIRLWDIECGACLRVLEGHEELVRCIRFDN--KRIVSGAYDGKIKVWDLVAALDPRA 253
Query: 737 ----IPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWD 773
+ L TL+ H+ V ++F D +VS+S D+T+ +WD
Sbjct: 254 PAGTLCLRTLVEHSGRVFRLQF-DEFQIVSSSHDDTILIWD 293
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 72.2 bits (175), Expect = 3e-14
Identities = 37/288 (12%), Positives = 97/288 (33%), Gaps = 43/288 (14%)
Query: 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFE------------------------------ 596
+S V L +D + + + IK+++
Sbjct: 14 TSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG 71
Query: 597 CDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEM 656
D++ + ++ + + + + + + VWD++ +T
Sbjct: 72 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLR 131
Query: 657 REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGR 716
R +++ D + S S D ++K+W+ + + T+ + + R
Sbjct: 132 RVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL--NGHKRGIACLQYRDR 189
Query: 717 SLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLS- 775
+ GS+D+ I +D+ ++ ++ + D +VS + D +K+WDL
Sbjct: 190 LVVSGSSDNTIRLWDIECGA--CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247
Query: 776 --MCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVY 820
+ L + H+ + +D + + S + + ++
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRL---QFDEFQIVSSSHDDTILIW 292
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.8 bits (117), Expect = 5e-07
Identities = 32/226 (14%), Positives = 69/226 (30%), Gaps = 30/226 (13%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQ 709
Q + E + V+ + + D + SG D ++K+W N + +V C+Q
Sbjct: 6 QRIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQ 62
Query: 710 FPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTL 769
+ D + S + + T D ++
Sbjct: 63 Y--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK---DRSI 117
Query: 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPAL 829
+WD++ T + L NV +F D Y+ + S + V++ +
Sbjct: 118 AVWDMASPTDITLRRVLVGHRAAVNVVDF-----DDKYIVSASGDRTIKVWNTSTCEFVR 172
Query: 830 SFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875
+ N + + +V+ +S I++
Sbjct: 173 TLNGHK----------------RGIACLQYRDRLVVSGSSDNTIRL 202
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.2 bits (110), Expect = 5e-06
Identities = 40/195 (20%), Positives = 75/195 (38%), Gaps = 12/195 (6%)
Query: 627 SYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686
Y +I S + +++WD + + + H V + + D ++ +GS D +V+
Sbjct: 22 QYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY---DERVIITGSSDSTVR 78
Query: 687 LWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHN 746
+W +N G + T+ + ++ L+GH
Sbjct: 79 VWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 138
Query: 747 KTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG 806
V+ V F D +VSAS D T+K+W+ S C + + GH + D
Sbjct: 139 AAVNVVDF-DDKYIVSASGDRTIKVWNTSTC------EFVRTLNGHKRGIACL--QYRDR 189
Query: 807 YVATGSETNEVFVYH 821
V +GS N + ++
Sbjct: 190 LVVSGSSDNTIRLWD 204
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 67.3 bits (164), Expect = 9e-13
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 232 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 289
+ T +Y SPE++ + SDI+ LG LL+EL P T + +R
Sbjct: 174 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 233
Query: 290 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
+ ++ E +L+ + RP + E+L++ +
Sbjct: 234 -IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.6 bits (162), Expect = 1e-12
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T + +PE + D+Y G+ + E+ P+S + + + V P
Sbjct: 176 TPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF 234
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
E + R + +LL F
Sbjct: 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.4 bits (159), Expect = 5e-12
Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T ++ +PE + DI+ LG++ E+ P+ + Q
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL--NEPRDSM 332
K F L + R ELLQ +FL +P S+
Sbjct: 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 65.5 bits (159), Expect = 8e-12
Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 7/118 (5%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQL 291
+A+PE G PV +D++ +GVL + L PF GE T+ +++ +
Sbjct: 190 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSA 248
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEE 348
++ F LL +P+ R + + L+ +L + + +I +
Sbjct: 249 FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDS 306
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.7 bits (157), Expect = 1e-11
Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 17/155 (10%)
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--- 286
T +Y +PE L + D++ LGV+++ L C PF ++ R+
Sbjct: 174 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMG 232
Query: 287 ---LPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE----PRDSMEEREAA 338
P + +E LL EP+ R + E + ++ + P+ +
Sbjct: 233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVL 292
Query: 339 IELREQID--EEELLLEFLLLVQQRKQESAKKLQD 371
E +E+ + +EE+ + +Q KK++D
Sbjct: 293 KEDKERWEDVKEEMTSALATMRVDYEQIKIKKIED 327
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 64.9 bits (156), Expect = 2e-11
Identities = 36/300 (12%), Positives = 78/300 (26%), Gaps = 49/300 (16%)
Query: 622 SICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR------------EHERRVWSIDFS 669
S+ + S S + +G ++VWD H + +I+
Sbjct: 19 SVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERD 75
Query: 670 SADPTLLASGSDDGSVKLWSINQGVSIGTIKTK---------------ANVCCVQFPLDS 714
+ + L+A+ S G + + I + + + A
Sbjct: 76 AFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL 135
Query: 715 GRSLAFGSADHRIYYYDLRNSKIPLCTL-----------------IGHNKTVSYVKFVDA 757
L Y + +L + ++ + V +
Sbjct: 136 SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER 195
Query: 758 TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEV 817
+ + + T+++ +LS HS ++N V S +A ++N
Sbjct: 196 GLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSF 255
Query: 818 FVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQS--SNTLVAANSSGNIKI 875
S + S V + TL +A G ++
Sbjct: 256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRF 315
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.2 bits (118), Expect = 6e-07
Identities = 32/304 (10%), Positives = 87/304 (28%), Gaps = 59/304 (19%)
Query: 560 NQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC---DAIINENRDIHYPVVEMAS 616
++ L + L + L A + + + D + +
Sbjct: 59 HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMK 118
Query: 617 RSKLSSICW----NSYIKSQIASSNFEGVVQVWDVSRSQ------------------VLT 654
+ ++ W + + ++ +++ +G +W +
Sbjct: 119 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE 178
Query: 655 EMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDS 714
+ S+D S + L+A+G ++G+V++ ++ + +++ ++ + S
Sbjct: 179 SPMTPSQFATSVDIS--ERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS 236
Query: 715 GRSLAF------GSADHRIYYYDLRN---------------SKIPLCTLIGHNKTVSYVK 753
+ + L S H+ V +
Sbjct: 237 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLS 296
Query: 754 FV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN----VKNFVGLSVWDGYV 808
F TL SA D L+ WD+ + + H + ++ + + +
Sbjct: 297 FNDSGETLCSAGWDGKLRFWDVKTK------ERITTLNMHCDDIEIEEDILAVDEHGDSL 350
Query: 809 ATGS 812
A
Sbjct: 351 AEPG 354
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 393 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.9 bits (112), Expect = 3e-06
Identities = 37/229 (16%), Positives = 68/229 (29%), Gaps = 37/229 (16%)
Query: 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 622
+ S S+ G L A N +++ E + + S S S
Sbjct: 179 SPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 237
Query: 623 ICWNSYIKSQIASS-NFEGVVQVWD-------------VSRSQVLTEMREHERRVWSIDF 668
IA N G + +++ SQ H V S+ F
Sbjct: 238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 297
Query: 669 SSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-----KANVCCVQFPLDSGRSLAFGSA 723
+ + TL S DG ++ W + I T+ + + G SLA
Sbjct: 298 NDSGETL-CSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEH-GDSLAEPGV 355
Query: 724 DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLW 772
+D++ K + +G + +L D +++ +
Sbjct: 356 ------FDVKFLKKGWRSGMGADLN---------ESLCCVCLDRSIRWF 389
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.7 bits (152), Expect = 3e-11
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 235 TNWYASPEELAGAPVSC-ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 290
T Y +PE L D++ G++L + P+ + + S + +
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 227
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
K + +L PS R + ++ + + N+P
Sbjct: 228 PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (154), Expect = 3e-11
Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 5/155 (3%)
Query: 221 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR 277
++ LL Y +PE VS A+D++ LG L++ L PF +
Sbjct: 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 278 TMSSLRHRVLPPQLLLK-FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
+ + + K EA F LL E R E LQ +L + + + +
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTK 271
Query: 336 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQ 370
+ + + ++V + ++
Sbjct: 272 VIRTLKHRRYYHTLIKKDLNMVVSAARISCGGAIR 306
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (152), Expect = 3e-11
Identities = 50/282 (17%), Positives = 102/282 (36%), Gaps = 62/282 (21%)
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSS-------------------- 670
++I S + + ++VW + L + H VWS
Sbjct: 28 NRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 87
Query: 671 -----------------ADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLD 713
+ SGS D ++++W I G + + +V V+
Sbjct: 88 ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMG--HVAAVRCVQY 145
Query: 714 SGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWD 773
GR + G+ D + +D L TL GH V ++F D +VS S D ++++WD
Sbjct: 146 DGRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWD 203
Query: 774 LSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNF 833
+ +H+ TGH ++ G+ + D + +G+ + V ++ +
Sbjct: 204 VETG------NCIHTLTGHQSL--TSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQG 255
Query: 834 NHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875
+ + S+V + N ++ ++ G +K+
Sbjct: 256 PN-------------KHQSAVTCLQFNKNFVITSSDDGTVKL 284
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.9 bits (151), Expect = 5e-11
Identities = 45/331 (13%), Positives = 94/331 (28%), Gaps = 51/331 (15%)
Query: 575 SFDRDGELFAAAGVNKKIKVFE------------------------------CDAIINEN 604
G + + +KV+ +
Sbjct: 22 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 81
Query: 605 RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVW 664
+ S++ + ++ S + + ++VWD+ Q + V
Sbjct: 82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ---CLHVLMGHVA 138
Query: 665 SIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSAD 724
++ D + SG+ D VK+W + T++ N G + GS D
Sbjct: 139 AVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLD 196
Query: 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDT 784
I +D+ + TL GH S ++ LVS + D+T+K+WD+
Sbjct: 197 TSIRVWDVETGN-CIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWDIKTGQCLQTLQ 254
Query: 785 PLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPET 844
+ F +V T S+ V ++ + + G
Sbjct: 255 GPNKHQSAVTCLQF-----NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGV-- 307
Query: 845 DDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875
+ + + + +G +
Sbjct: 308 ------VWRIRAS-NTKLVCAVGSRNGTEET 331
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.1 bits (149), Expect = 1e-10
Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 21/164 (12%)
Query: 579 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF 638
DG + ++ I+V+ D+ S + + S N
Sbjct: 186 DGIHVVSGSLDTSIRVW----------DVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 235
Query: 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGT 698
+ V++WD+ Q L ++ + ++ + + + SDDG+VKLW + G I
Sbjct: 236 DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRN 295
Query: 699 IKTKAN------VCCVQFPLDSGRSLAFGSADH----RIYYYDL 732
+ T + V ++ ++ A GS + ++ D
Sbjct: 296 LVTLESGGSGGVVWRIRAS-NTKLVCAVGSRNGTEETKLLVLDF 338
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (106), Expect = 1e-05
Identities = 17/57 (29%), Positives = 21/57 (36%), Gaps = 6/57 (10%)
Query: 738 PLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN 794
L GH+ V +VS S DNTLK+W L + GHT
Sbjct: 8 SPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTG------KCLRTLVGHTG 58
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.5 bits (98), Expect = 1e-04
Identities = 20/123 (16%), Positives = 38/123 (30%), Gaps = 6/123 (4%)
Query: 688 WSINQGVSIGTIK--TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGH 745
W + S +K + C+QF G + GS D+ + + K L TL+GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVITCLQF---CGNRIVSGSDDNTLKVWSAVTGK-CLRTLVGH 56
Query: 746 NKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWD 805
V + D + ++ + + + + V D
Sbjct: 57 TGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRD 116
Query: 806 GYV 808
+
Sbjct: 117 ATL 119
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.3 bits (152), Expect = 3e-11
Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 656 MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSG 715
+ HE V S+ F+ S D + W G SI K ++V +D
Sbjct: 261 LHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVD-D 318
Query: 716 RSLAFGSADHRIYYYDL 732
+ + GS D + Y++
Sbjct: 319 KYIVTGSGDKKATVYEV 335
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.4 bits (134), Expect = 6e-09
Identities = 51/280 (18%), Positives = 85/280 (30%), Gaps = 18/280 (6%)
Query: 542 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAII 601
+G K S K+ ++Q D LN N + S DG G + +++
Sbjct: 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL---- 126
Query: 602 NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHER 661
+ + S + S++ S +Q L +
Sbjct: 127 ---AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT 183
Query: 662 RVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFG 721
S S D T L +G D +V+ W + +G + + + + +
Sbjct: 184 DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGY---CPTGEWLA 240
Query: 722 SADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSR 780
L +K L H V +KF VS DN L W
Sbjct: 241 VGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP--YGA 298
Query: 781 VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVY 820
I + ++ +SV D Y+ TGS + VY
Sbjct: 299 SIFQ-----SKESSSVLSCDISVDDKYIVTGSGDKKATVY 333
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (100), Expect = 1e-04
Identities = 26/183 (14%), Positives = 51/183 (27%), Gaps = 7/183 (3%)
Query: 663 VWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGS 722
+S ++ D + I T+ VC V R + G
Sbjct: 12 AYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNP-TRHVYTGG 70
Query: 723 ADHRIYYYDLRN----SKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMC 777
+ +D+ + S + + + + K + D TL+ +TL +WDL+
Sbjct: 71 -KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP 129
Query: 778 TSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHAD 837
T R+ S + V + G+ +
Sbjct: 130 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 189
Query: 838 PLS 840
+S
Sbjct: 190 DIS 192
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.3 bits (151), Expect = 4e-11
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 7/97 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T Y PE + G D++ LGVL +E PF + R P
Sbjct: 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 226
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 327
+ + A LL PS RP + E+L+ ++
Sbjct: 227 V---TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.0 bits (88), Expect = 0.003
Identities = 10/78 (12%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Query: 44 LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103
L G + + + G + + L K + D ++ + HS+ +
Sbjct: 71 LYGYFHDATRVYLILEYAPLGT--VYRELQKLSK-FDEQRTATYITELANALSYCHSKRV 127
Query: 104 VVHNVRPSCFVMSSFNHV 121
+ +++P ++ S +
Sbjct: 128 IHRDIKPENLLLGSAGEL 145
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 62.7 bits (152), Expect = 4e-11
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPP 289
T Y +PE LA P S A D + +GV+ + L C PF E + +
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY-DENDAKLFEQILKAEYEFDS 230
Query: 290 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAI--ELREQID 346
A F L+ +P R + LQ ++ + ++ ++++
Sbjct: 231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFA 290
Query: 347 EEEL 350
+ +
Sbjct: 291 KSKW 294
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 61.5 bits (147), Expect = 8e-11
Identities = 16/68 (23%), Positives = 28/68 (41%)
Query: 706 CCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSAST 765
+A GS D I+ Y ++ + L H V+ + + +TLVS+
Sbjct: 218 KGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGA 277
Query: 766 DNTLKLWD 773
D +K W+
Sbjct: 278 DACIKRWN 285
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.4 bits (126), Expect = 4e-08
Identities = 11/70 (15%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 622 SICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEMREHERRVWSIDFSSADPTLLASGS 680
+ +A+ + + + ++ V R +++ + H+ V ++ + P+ L S
Sbjct: 219 GANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWE--TPSTLVSSG 276
Query: 681 DDGSVKLWSI 690
D +K W++
Sbjct: 277 ADACIKRWNV 286
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 45.3 bits (105), Expect = 2e-05
Identities = 15/106 (14%), Positives = 31/106 (29%), Gaps = 9/106 (8%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQF 710
+VL + H + + ++ + L SGS DG + WS + + + +
Sbjct: 4 EVLKTISGHNKGITALTVNP-----LISGSYDGRIMEWSSSSMHQDHS----NLIVSLDN 54
Query: 711 PLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVD 756
S ++ +N + V D
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTND 100
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 287 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.8 bits (101), Expect = 5e-05
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 738 PLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLS 775
L T+ GHNK ++ + L+S S D + W S
Sbjct: 5 VLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSS 39
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 62.2 bits (149), Expect = 9e-11
Identities = 15/88 (17%), Positives = 31/88 (35%), Gaps = 5/88 (5%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT----KANVC 706
Q++ + + + I +LL S DGS+ ++ + + K +
Sbjct: 2 QIVQIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 707 CVQFPLDSGRSLAFGSADHRIYYYDLRN 734
C F ++ + G+ I DL
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIG 88
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.7 bits (127), Expect = 5e-08
Identities = 25/173 (14%), Positives = 46/173 (26%), Gaps = 19/173 (10%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSI---DFSSADPTLLASGS 680
S++ VQ + + + E + I + A S
Sbjct: 154 FTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS 213
Query: 681 DDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSG------RSLAF---------GSADH 725
DG V + + + C + L S+ F +D
Sbjct: 214 IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDG 273
Query: 726 RIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCT 778
I ++L+ K + N+ L A++D+T K T
Sbjct: 274 IISCWNLQTRK-KIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAIDQT 325
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.3 bits (113), Expect = 2e-06
Identities = 32/327 (9%), Positives = 79/327 (24%), Gaps = 38/327 (11%)
Query: 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 627
+ + + L + + V++ + + + + L +
Sbjct: 11 KDYISDIKIIPSKSLLLITSWDGSLTVYK----FDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKL 687
QI +G + D+ S + +E + L + S DG +++
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEV 126
Query: 688 WSINQGVSIGTIKTKANV------CCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCT 741
N + + L G + ++ ++ L + T
Sbjct: 127 IDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGT 186
Query: 742 LIGHNKTVSYVKFV----DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF-------- 789
+ + +S D + + + +F
Sbjct: 187 IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246
Query: 790 -TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAA 848
T N + S ++ T + ++ +F + D
Sbjct: 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS---------- 296
Query: 849 QFISSVCWRGQSSNTLVAANSSGNIKI 875
+ + N L A S K
Sbjct: 297 --VVKIACSD---NILCLATSDDTFKT 318
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.7 bits (101), Expect = 7e-05
Identities = 10/80 (12%), Positives = 24/80 (30%), Gaps = 5/80 (6%)
Query: 744 GHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLS 802
+S +K + + L+ S D +L ++ + V L + +
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV---DLLQSLRYKHPLLCCNFI 65
Query: 803 VWDG-YVATGSETNEVFVYH 821
+ G+ E+
Sbjct: 66 DNTDLQIYVGTVQGEILKVD 85
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.9 bits (147), Expect = 1e-10
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPP 289
T + +PE + P+ +D++ +GV+ + L PF G+ K T++++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAVNYEFED 237
Query: 290 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIE 340
+ A F LL +P R + + LQ ++ +P+D+ + +A
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-KPKDTQQALSSAWS 288
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 61.4 bits (147), Expect = 2e-10
Identities = 26/200 (13%), Positives = 66/200 (33%), Gaps = 9/200 (4%)
Query: 589 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVS 648
K+++ + E +S S S++A + + V + D
Sbjct: 172 IKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD 231
Query: 649 RSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCV 708
+ + + + ++ F + + +L+A+G D L++ + + + +V
Sbjct: 232 KKMAVATLASETLPLLAVTFIT-ESSLVAAGHDC-FPVLFTYDSAAGKLSFGGRLDVPKQ 289
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-----DATTLVSA 763
F + D + + L + H +VS + + + +
Sbjct: 290 SSQRGLTARERFQNLDKKASSEGSAAAGAGLDS--LHKNSVSQISVLSGGKAKCSQFCTT 347
Query: 764 STDNTLKLWDLSMCTSRVID 783
D + +WD+ S + D
Sbjct: 348 GMDGGMSIWDVRSLESALKD 367
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 55.2 bits (131), Expect = 2e-08
Identities = 33/312 (10%), Positives = 89/312 (28%), Gaps = 58/312 (18%)
Query: 571 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 630
+ ++++D A N ++ ++E
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYE---------------------------------- 35
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690
++ + E++EH +V +D++ D + + D + +W++
Sbjct: 36 --------------KSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTL 80
Query: 691 N----QGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHN 746
+ + +A C P + ++ GS I Y++ N +
Sbjct: 81 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPI 140
Query: 747 KT--VSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVW 804
++ +S ++ L + S D +++ + P + + S
Sbjct: 141 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS 200
Query: 805 DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTL 864
G+V + + A++ + + + ++L
Sbjct: 201 CGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM---AVATLASETLPLLAVTFITESSL 257
Query: 865 VAANSSGNIKIL 876
VAA +
Sbjct: 258 VAAGHDCFPVLF 269
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} Length = 371 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.8 bits (109), Expect = 8e-06
Identities = 25/315 (7%), Positives = 70/315 (22%), Gaps = 71/315 (22%)
Query: 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI--------------------------- 600
+ V + + D G ++ V+
Sbjct: 51 NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKF 110
Query: 601 -------------INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647
+ D +A+ + + +++
Sbjct: 111 AVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 170
Query: 648 SRSQVLTEMREHERRVWSIDF-----------------SSADPTLLASGSDDGSVKLWSI 690
+V SA+ + +A S D +V L
Sbjct: 171 YIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA 230
Query: 691 NQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADH-RIYYYDLRNSKIPLCTLIGHNKTV 749
++ +++ T+ ++ + +A G ++ YD K + G
Sbjct: 231 DKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGK---LSFGGR---- 283
Query: 750 SYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGY-- 807
+ ++ + + D + + H N + + +
Sbjct: 284 --LDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKC 341
Query: 808 --VATGSETNEVFVY 820
T + ++
Sbjct: 342 SQFCTTGMDGGMSIW 356
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.1 bits (145), Expect = 2e-10
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 7/127 (5%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
LV Q K+ D + ++++ +ASPE + + S SD++
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSSTG----TKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
GVL++E+F + + + + L P RP
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRP 247
Query: 315 KMGELLQ 321
LL+
Sbjct: 248 AFSRLLR 254
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 59.8 bits (144), Expect = 3e-10
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +PP
Sbjct: 177 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 236
Query: 292 LLK-FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
+ + + L L P R + ++++ +
Sbjct: 237 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 4e-10
Identities = 26/107 (24%), Positives = 43/107 (40%), Gaps = 14/107 (13%)
Query: 235 TNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 290
T Y+ PE + ++ ++ LG+LL+++ C PF EE +R +V Q
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFRQ 225
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 336
+ E W L PS RP E+ ++ + E E
Sbjct: 226 ---RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.2 bits (143), Expect = 5e-10
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 232 LMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR 285
L + + +PE + P S SD+Y G++L+EL P+S + + + +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225
Query: 286 VLPPQLLL---KFPKEA-SFCLWLLHPEPSGRPKMGELLQS 322
L P L PK L + RP ++L S
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 59.3 bits (143), Expect = 7e-10
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQ 290
T +A+PE + PV +D++ +GVL + L PF+ ++ + R
Sbjct: 191 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDED 250
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
EA F LL EP R + + L+ +L ++ R
Sbjct: 251 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSR 296
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 1e-09
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289
+ +PE L S SD++ G+LL+E++ + +
Sbjct: 161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 220
Query: 290 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
P H + + RP +L +
Sbjct: 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.3 bits (140), Expect = 1e-09
Identities = 20/140 (14%), Positives = 51/140 (36%), Gaps = 6/140 (4%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+LV K+ D ++ ++ + + + +PE ++ + ASD++
Sbjct: 141 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG--KIPIRWTAPEAISYRKFTSASDVWS 198
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
G++++E+ M ++ P + + E + RP
Sbjct: 199 FGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRP 258
Query: 315 KMGELLQS-EFLNEPRDSME 333
K +++ + L DS++
Sbjct: 259 KFADIVSILDKLIRAPDSLK 278
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 58.1 bits (140), Expect = 1e-09
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 8/124 (6%)
Query: 235 TNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 288
T ++ +PE + D++ LG+ EL P + + P
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNESP 232
Query: 289 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDE 347
+ + +F L P RP LL+ F+ R + ++ + E
Sbjct: 233 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRE 292
Query: 348 EELL 351
+ L
Sbjct: 293 LDNL 296
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.7 bits (139), Expect = 1e-09
Identities = 24/140 (17%), Positives = 42/140 (30%), Gaps = 11/140 (7%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+LV KI D + + + + + +PE + + SD++
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGR 313
G+LL E+ G + +L R P+E P R
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDR 254
Query: 314 PKMGELLQSEFLNEPRDSME 333
P L L + + E
Sbjct: 255 PTFDYLRS--VLEDFFTATE 272
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.7 bits (139), Expect = 1e-09
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 17/121 (14%)
Query: 237 WYASPEELAG-----APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 288
++ +PE + P +D++ LG+ L E+ P + +
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 234
Query: 289 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDE 347
++ F L R +LLQ F+ + +RE I E
Sbjct: 235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK--------PIRELIAE 286
Query: 348 E 348
Sbjct: 287 A 287
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.2 bits (91), Expect = 0.002
Identities = 4/55 (7%), Positives = 23/55 (41%)
Query: 67 SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 121
++ + + +R + + + +Q ++ + H I+ +++ + + +
Sbjct: 95 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDI 149
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 3e-09
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T Y +PE L G + + D + GVLL+E+ PF G+++ S+R P
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH-GQDEEELFHSIRMD--NPFY 222
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKM-GELLQSEFLNE-PRDSMEEREAAIELREQIDEE 348
KEA + L EP R + G++ Q E + +E +E R ++
Sbjct: 223 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 282
Query: 349 ELLLEF 354
F
Sbjct: 283 FDCSNF 288
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.6 bits (136), Expect = 3e-09
Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 7/105 (6%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ +PE + SD++ G+LL EL G + + P
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 235
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
+ P+ EP RP L FL + S E +
Sbjct: 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQA--FLEDYFTSTEPQ 278
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.1 bits (137), Expect = 3e-09
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 4/127 (3%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+++ K+ D + + +K+ + + + E L + SD++
Sbjct: 161 CMLDEKFTVKVADFGL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
GVLL+EL P L Q L HP+ RP
Sbjct: 220 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRP 279
Query: 315 KMGELLQ 321
EL+
Sbjct: 280 SFSELVS 286
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 4e-09
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
+ +PE + S SD++ GVL++E F P+ K ++++ +
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR--GMKGSEVTAMLEKGERMG 230
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
P+E + RP +
Sbjct: 231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 56.8 bits (135), Expect = 5e-09
Identities = 16/165 (9%), Positives = 38/165 (23%), Gaps = 19/165 (11%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE-------HERRVWSIDFSSADPTLL 676
+ ++ + D E+ T
Sbjct: 184 PAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSE 243
Query: 677 ASGSDDGSVKLWSINQGVSIGTIKTKA----NVCCVQFPLDS--GRSLAFGSADHRIYYY 730
A D + S V G + ++ P+ + Y
Sbjct: 244 AGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKY 303
Query: 731 DLRNSKIPLCTLIGHNKTVSYVKF-VDATTLVSASTDNTLKLWDL 774
D++ K + ++ ++ D T++ D + + L
Sbjct: 304 DVKTRK-----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPL 343
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 56.0 bits (133), Expect = 1e-08
Identities = 18/135 (13%), Positives = 39/135 (28%), Gaps = 6/135 (4%)
Query: 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 626
A + I + D + +S S +
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSV-PVH 284
Query: 627 SYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVK 686
+ + +GV+ +DV +V + + + S AD + DDG +
Sbjct: 285 GEFAAYYQGAPEKGVLLKYDVKTRKVTE----VKNNLTDLRLS-ADRKTVMVRKDDGKIY 339
Query: 687 LWSINQGVSIGTIKT 701
+ + + T++T
Sbjct: 340 TFPLEKPEDERTVET 354
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 47.9 bits (112), Expect = 3e-06
Identities = 24/264 (9%), Positives = 54/264 (20%), Gaps = 28/264 (10%)
Query: 572 CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 631
+ + + A E R + + I + +K
Sbjct: 91 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKH 150
Query: 632 QIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSIN 691
+ V+D+ ++ E+ + + L S
Sbjct: 151 GETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSK--NLYYLSYRSLDPSPDRV 208
Query: 692 QGVSIGTIKTK--------ANVCCVQF-----PLDSGRSLAFGSADHRIYYYDLRNSKIP 738
+ +K + + ++G
Sbjct: 209 VLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRM 268
Query: 739 LCTLIGHNKTVSYVKF-VDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN 797
+ L S A A L +D+ T N
Sbjct: 269 IIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKT----------RKVTEVKNNLT 318
Query: 798 FVGLSVWDG-YVATGSETNEVFVY 820
+ LS D V + +++ +
Sbjct: 319 DLRLSA-DRKTVMVRKDDGKIYTF 341
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 360 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.2 bits (92), Expect = 0.001
Identities = 34/298 (11%), Positives = 60/298 (20%), Gaps = 64/298 (21%)
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG-SVKLWS 689
IA + G + DVS + VL R+ + G+ +G + ++
Sbjct: 16 DLIAFVS-RGQAFIQDVSGTYVLK--VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYD 72
Query: 690 INQG---------------------------------------------------VSIGT 698
G I
Sbjct: 73 YRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITD 132
Query: 699 IKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDAT 758
N + + G I+ YD+ KI T +
Sbjct: 133 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADS-K 191
Query: 759 TLVSASTDNTLKLWDLS-MCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEV 817
L S + D + S + + N L G
Sbjct: 192 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGE----- 246
Query: 818 FVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875
+ N + D + + S G+ + A G +
Sbjct: 247 -YDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSV-PVHGEFAAYYQGAPEKGVLLK 302
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 6e-09
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
LV K+ D ++ ++++ + ++ PE L + S SDI+
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLDDEY----TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313
GVL++E++ P+ + T + + + L K + H + R
Sbjct: 187 FGVLMWEIYSLGKMPYE-RFTNSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADER 245
Query: 314 PKMGELLQ 321
P LL
Sbjct: 246 PTFKILLS 253
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 55.8 bits (134), Expect = 6e-09
Identities = 16/136 (11%), Positives = 36/136 (26%), Gaps = 7/136 (5%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+L++ K+ D + + +K + D++
Sbjct: 141 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPS 311
GV+++ L PF ++ + + + L +P
Sbjct: 201 TGVIMYTLLAGSPPF-WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 259
Query: 312 GRPKMGELLQSEFLNE 327
R E L F +
Sbjct: 260 KRYTAEEALAHPFFQQ 275
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.0 bits (134), Expect = 7e-09
Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 16/151 (10%)
Query: 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239
D+ + + G V +++ K D R + + + L T YA
Sbjct: 128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH-------QHIPYRENKNLTGTARYA 180
Query: 240 SPEELAGAPVSCASDIYRLGVLLFELFC--------PFSTGEEKTRTMSSLRHRVLPPQL 291
S G S D+ LG +L +T +K +S + L
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
+P E ++ + +P L Q
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.5 bits (133), Expect = 8e-09
Identities = 21/142 (14%), Positives = 56/142 (39%), Gaps = 8/142 (5%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+LV K+ D ++ ++ P + + +PE + + ASD++
Sbjct: 159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218
Query: 258 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 313
G++++E+ P+ ++++ P + L + + R
Sbjct: 219 YGIVMWEVMSYGERPYW-DMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 277
Query: 314 PKMGELLQS--EFLNEPRDSME 333
PK G+++ + + + P +S++
Sbjct: 278 PKFGQIVNTLDKMIRNP-NSLK 298
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.8 bits (131), Expect = 1e-08
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
+ +PE L S ASD + GV L+E+F P+ G ++ + +
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLP 235
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 327
P++ + + +P RP L +FL E
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALR--DFLLE 271
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.3 bits (131), Expect = 1e-08
Identities = 30/267 (11%), Positives = 79/267 (29%), Gaps = 20/267 (7%)
Query: 568 SNLVCSLSF--DRDGELFAAAGVNKKIKVFEC-DAIINENRDIHYPVVEMASRSKLSSIC 624
S++V ++ F + + + + K+ V+ + + +++ +S I
Sbjct: 63 SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDIS 122
Query: 625 WNS-YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
W+ + + + L E+ H +R+ + + P + DDG
Sbjct: 123 WDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDG 182
Query: 684 SVKLWSINQGVSI-------GTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK 736
SV + +V + ++ K
Sbjct: 183 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 242
Query: 737 IPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK 796
+ + ++D+ + D T+++WD++ + +T
Sbjct: 243 YIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTT------SKCVQKWTLDKQQL 296
Query: 797 NFVGLSVW---DGYVATGSETNEVFVY 820
+ V +G + + S + Y
Sbjct: 297 GNQQVGVVATGNGRIISLSLDGTLNFY 323
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 52.6 bits (124), Expect = 9e-08
Identities = 10/69 (14%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSD 681
+ + A+ + ++VWDV+ S+ + + + + + + + S S
Sbjct: 257 ALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL 316
Query: 682 DGSVKLWSI 690
DG++ + +
Sbjct: 317 DGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.3 bits (118), Expect = 5e-07
Identities = 26/214 (12%), Positives = 55/214 (25%), Gaps = 10/214 (4%)
Query: 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 627
+ + +S+D +G G + + + +
Sbjct: 115 AGPISDISWDFEGRRLCVVGEGRDNFGVFIS--WDSGNSLGEVSGHSQRINACHLKQSRP 172
Query: 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKL 687
+ Q S + V ++FS + + D +
Sbjct: 173 MRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 232
Query: 688 WSINQGVSIGTIKTKANVCCVQFP---LDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG 744
+ G + I+ + A AD I +D+ SK +
Sbjct: 233 FDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSK-CVQKWTL 291
Query: 745 HNKTVSY----VKFVDATTLVSASTDNTLKLWDL 774
+ + V ++S S D TL ++L
Sbjct: 292 DKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 325 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.4 bits (108), Expect = 8e-06
Identities = 29/271 (10%), Positives = 63/271 (23%), Gaps = 6/271 (2%)
Query: 609 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ---VLTEMREHERRVWS 665
P R+ + + ++ + V+ D S+ V+ V +
Sbjct: 9 IPPQPSTQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTT 68
Query: 666 IDFS-SADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSAD 724
+ FS L SG + G V +W +++ +++
Sbjct: 69 VKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA-GPISDISWDFEG 127
Query: 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDT 784
R+ + ++ V + V+
Sbjct: 128 RRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFY 187
Query: 785 PLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPET 844
F + + + V S + FV F+ + L E
Sbjct: 188 QGPPFKFSASDRTHHKQGSFVRDVEF-SPDSGEFVITVGSDRKISCFDGKSGEFLKYIED 246
Query: 845 DDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875
D S + I++
Sbjct: 247 DQEPVQGGIFALSWLDSQKFATVGADATIRV 277
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 55.3 bits (131), Expect = 1e-08
Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 4/89 (4%)
Query: 604 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV-SRSQVLTEMREHERR 662
Y + LS+I + + S + E ++++ S V + + +
Sbjct: 268 WDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQ 326
Query: 663 VWSIDFSSADPTLLASGSDDGSVKLWSIN 691
+WS++F TL+A+ DG L ++
Sbjct: 327 IWSVNFK--GKTLVAAVEKDGQSFLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 53.7 bits (127), Expect = 4e-08
Identities = 11/71 (15%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Query: 705 VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSAS 764
F + ++ ++++ Y+LR+ K+ ++ + V F T + +
Sbjct: 285 SAITTFYVSD--NILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVE 342
Query: 765 TDNTLKLWDLS 775
D L L
Sbjct: 343 KDGQSFLEILD 353
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.7 bits (119), Expect = 4e-07
Identities = 35/160 (21%), Positives = 53/160 (33%), Gaps = 8/160 (5%)
Query: 701 TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTL 760
+ + C+QF + G+ D I YD N K L L GH+ V +K+ L
Sbjct: 12 MTSVITCLQF---EDNYVITGADDKMIRVYDSINKK-FLLQLSGHDGGVWALKYAHGGIL 67
Query: 761 VSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVY 820
VS STD + T + T + Y+ TGS N + V+
Sbjct: 68 VSGSTDR----TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVW 123
Query: 821 HKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQS 860
H PL ++ F+ + S
Sbjct: 124 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMAS 163
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 50.3 bits (118), Expect = 6e-07
Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 7/95 (7%)
Query: 741 TLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800
TL GH +V + +++ + D ++++D L +GH +
Sbjct: 7 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINK------KFLLQLSGHDGGVWALK 60
Query: 801 LSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 835
+ G + +GS V V+ F ++
Sbjct: 61 YA-HGGILVSGSTDRTVRVWDIKKGCCTHVFEGHN 94
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 48.7 bits (114), Expect = 2e-06
Identities = 14/121 (11%), Positives = 43/121 (35%), Gaps = 3/121 (2%)
Query: 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTL 675
S ++ + + + + + + +++V+D + L ++ H+ VW++ ++ +
Sbjct: 12 MTSVITCLQFED---NYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILV 68
Query: 676 LASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNS 735
S V + C + + + GS D+ ++ + L
Sbjct: 69 SGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKE 128
Query: 736 K 736
Sbjct: 129 S 129
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.7 bits (101), Expect = 6e-05
Identities = 31/324 (9%), Positives = 75/324 (23%), Gaps = 75/324 (23%)
Query: 558 DLNQGDLLNS----SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613
D L V +L + G L + + + H V
Sbjct: 39 DSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR 98
Query: 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRV---------- 663
I + + + + VW + + + + E
Sbjct: 99 C-------LDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENP 151
Query: 664 ----------WSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLD 713
S+ S ++ SGS D ++ +W + Q + + +
Sbjct: 152 YFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDH 211
Query: 714 SGRSLAFGSADHRIY--------------------------------------YYDLRNS 735
+ S D I +
Sbjct: 212 ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDAN 271
Query: 736 KIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV 795
H + F + ++ + ++N +++L + +++ + +
Sbjct: 272 DYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR--SGKLVHA---NILKDADQ 326
Query: 796 KNFVGLSVWDGYVATGSETNEVFV 819
V VA + + F+
Sbjct: 327 IWSVNFKG-KTLVAAVEKDGQSFL 349
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 54.2 bits (128), Expect = 2e-08
Identities = 12/130 (9%), Positives = 34/130 (26%), Gaps = 3/130 (2%)
Query: 651 QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT--KANVCCV 708
+ H + + ++ S+ D L S +G + W I+ G+S + +
Sbjct: 3 SIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGI 61
Query: 709 QFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNT 768
+ ++ + + + A+
Sbjct: 62 KTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKH 121
Query: 769 LKLWDLSMCT 778
+ ++ T
Sbjct: 122 IAIYSHGKLT 131
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 51.9 bits (122), Expect = 1e-07
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 719 AFGSADHRIYYYDLRNSKIPLCTLI--GHNKTVSYVKFVDATTLVSASTDNTLKLWDLS 775
A GS D+ + +++ + +V+ V +++ TT+VSA D+ +K W++
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 49.6 bits (116), Expect = 8e-07
Identities = 11/69 (15%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSR--SQVLTEMREHERRVWSIDFSSADPTLLASGSD 681
S ++A+ + + V VW++++ + H + + T + S
Sbjct: 230 VSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL-NETTIVSAGQ 288
Query: 682 DGSVKLWSI 690
D ++K W++
Sbjct: 289 DSNIKFWNV 297
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 299 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 45.0 bits (104), Expect = 2e-05
Identities = 13/97 (13%), Positives = 28/97 (28%), Gaps = 1/97 (1%)
Query: 702 KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLV 761
+ + D G++L A+ I +D+ H ++ +K L
Sbjct: 12 NKAITALSSSAD-GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLF 70
Query: 762 SASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF 798
+ S D+ LK+ + +
Sbjct: 71 TVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV 107
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.4 bits (130), Expect = 2e-08
Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 6/92 (6%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
+ +PE L + SD++ G+LL+E+F P+ G L
Sbjct: 229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP-GIPVDANFYKLIQNGFKMD 287
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
+E + RP L
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 319
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.0 bits (129), Expect = 3e-08
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 11/140 (7%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257
+LV KI D ++ + Q +K+ + + + E L + + SD++
Sbjct: 158 ILVGENYVAKIADFGLS------RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 211
Query: 258 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 314
GVLL+E+ G L + L + +P RP
Sbjct: 212 YGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 271
Query: 315 KMGELLQ--SEFLNEPRDSM 332
++L + L E + +
Sbjct: 272 SFAQILVSLNRMLEERKTYV 291
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 53.6 bits (127), Expect = 4e-08
Identities = 18/178 (10%), Positives = 44/178 (24%), Gaps = 14/178 (7%)
Query: 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667
+++ + ++ ++ + ++ + +++I
Sbjct: 164 DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFS---------MLYTIA 214
Query: 668 FSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRI 727
D A+ + G + +R+
Sbjct: 215 RFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRL 274
Query: 728 YYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDT 784
YDL+ K L + T V F L T N L +++ T +
Sbjct: 275 AKYDLKQRK--LIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD--TLEKVKN 328
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 50.9 bits (120), Expect = 4e-07
Identities = 7/79 (8%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 623 ICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD 682
K + +D+ + +++ + + + F L G
Sbjct: 255 FTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFD-KKGDKLYLGGTF 312
Query: 683 GSVKLWSINQGVSIGTIKT 701
+ +++ + + IK
Sbjct: 313 NDLAVFNPDTLEKVKNIKL 331
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 49.0 bits (115), Expect = 1e-06
Identities = 18/233 (7%), Positives = 48/233 (20%), Gaps = 24/233 (10%)
Query: 670 SADPTLLASGSDDGSVKLWSINQGVSIGTIK--TKANVCCVQFPLDSGRSLAFGSADHRI 727
A + + ++ + + + K D+ + + I
Sbjct: 5 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDI 64
Query: 728 YYYDLRNSKIPLC-----TLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVI 782
Y DL K +++ V A+ + T +L D + +
Sbjct: 65 YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRL 124
Query: 783 D-------TPLHSFTGHTNVKNFVGLSV-WDGYVATGSETNEVFVYHKAFPMPAL----- 829
+ + + DG + AL
Sbjct: 125 EVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNW 184
Query: 830 ----SFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878
+ + ++ A+ +++
Sbjct: 185 NRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 237
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} Length = 346 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Score = 43.2 bits (100), Expect = 9e-05
Identities = 25/304 (8%), Positives = 67/304 (22%), Gaps = 59/304 (19%)
Query: 574 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 633
+ E + V + + + M + + ++
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVD----VASDTVYK--SCVMPDKFGPGTAMMAPDNRTAY 55
Query: 634 ASSNFEGVVQVWDVSRSQVL------TEMREHERRVWSIDFSSADPTLLASGSDDGSVKL 687
+N G + D+ + + E R ++S S + A+ + +
Sbjct: 56 VLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND 115
Query: 688 WSINQGVSIGTIKTKANVCCVQFPL---DSGRSLAFGSADHRIYYYDLRNSKIPLCTL-- 742
+ + + T + L + D +Y K+ + T
Sbjct: 116 HYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKY 175
Query: 743 ---IGHNKTVSYVKF---------------------------VDATTLVSASTDNTLKLW 772
+ D +A
Sbjct: 176 TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 235
Query: 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVG----------LSVWDGYVATGSETNEVFVYHK 822
DL + + + T +++ L+ +D + + H
Sbjct: 236 DLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYD--LKQRKLIKAANLDHT 293
Query: 823 AFPM 826
+ +
Sbjct: 294 YYCV 297
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 53.3 bits (127), Expect = 5e-08
Identities = 18/112 (16%), Positives = 33/112 (29%), Gaps = 9/112 (8%)
Query: 219 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--------PFS 270
K+ ++ L T Y S G S D+ LG + +
Sbjct: 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219
Query: 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 321
T ++K + + +L FP+E + + + P L
Sbjct: 220 TNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.7 bits (126), Expect = 6e-08
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
Y SPE L +SD++ LG ++++L PF G E ++ P+
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--- 231
Query: 294 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
KF +A LL + + R E+ L
Sbjct: 232 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 264
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.6 bits (125), Expect = 8e-08
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 289
+ +PE L + SD++ GVLL+E+F G L+
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 257
Query: 290 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321
+ + H PS RP +L++
Sbjct: 258 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 52.2 bits (124), Expect = 1e-07
Identities = 16/91 (17%), Positives = 31/91 (34%), Gaps = 5/91 (5%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ PE + + SD++ GV+L+E+F G + +R +
Sbjct: 205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILA-C 263
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
P E + P+ RP + +
Sbjct: 264 PENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.3 bits (122), Expect = 2e-07
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 7/101 (6%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ +PE + + ASD++ GV ++E+ G + + + + P +
Sbjct: 172 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-M 230
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ--SEFLNEPR 329
P S +PS RP+ EL S L E +
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 271
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 52.1 bits (124), Expect = 2e-07
Identities = 24/205 (11%), Positives = 51/205 (24%), Gaps = 27/205 (13%)
Query: 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG--VSI 696
G + + D S ++ T + V S A L DG V + + ++
Sbjct: 41 AGQIALIDGSTYEIKTVLDTGYA-VHISRLS-ASGRYLFVIGRDGKVNMIDLWMKEPTTV 98
Query: 697 GTIKTKAN----VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYV 752
IK + + ++A + D + P T
Sbjct: 99 AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE-PKKIQSTRGMTYDEQ 157
Query: 753 KFV-------------DATTLVSASTDNTLKLWDLSMCTSRVIDT-----PLHSFTGHTN 794
++ +V+ + L D + + LH +
Sbjct: 158 EYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGS 217
Query: 795 VKNFVGLSVWDGYVATGSETNEVFV 819
+ F+ + + V
Sbjct: 218 HRYFITAANARNKLVVIDTKEGKLV 242
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} Length = 432 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Score = 49.0 bits (116), Expect = 2e-06
Identities = 26/206 (12%), Positives = 50/206 (24%), Gaps = 15/206 (7%)
Query: 675 LLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRN 734
+ D G + L + + T V + GR L D ++ DL
Sbjct: 34 FSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSAS-GRYLFVIGRDGKVNMIDLWM 92
Query: 735 SK----IPLCTLIGHNKTVSYVKF--VDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHS 788
+ + + D + A + D P
Sbjct: 93 KEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET------LEPKKI 146
Query: 789 FTGHTNVKNFVGLSVWDGYVA-TGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDA 847
+ + A S F+ + L ++ + L A
Sbjct: 147 QSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK-TTEISA 205
Query: 848 AQFISSVCWRGQSSNTLVAANSSGNI 873
+F+ G + AAN+ +
Sbjct: 206 ERFLHDGGLDGSHRYFITAANARNKL 231
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.3 bits (122), Expect = 2e-07
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 15/131 (11%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ + E + + SD++ GV ++EL G + S L PQ
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235
Query: 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLNEP----------RDSMEEREAAI 339
+ + + RPK EL+ S+ +P R + +
Sbjct: 236 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSN 295
Query: 340 ELREQIDEEEL 350
R +DEE++
Sbjct: 296 FYRALMDEEDM 306
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.2 bits (122), Expect = 2e-07
Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 45/138 (32%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKT--------------- 276
T Y SPE L G S SDI+ +G+ L E+ P + K
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
Query: 277 --------------------------RTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPE 309
+ + + P F E F L
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 310 PSGRPKMGELLQSEFLNE 327
P+ R + +L+ F+
Sbjct: 286 PAERADLKQLMVHAFIKR 303
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 51.3 bits (121), Expect = 3e-07
Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Query: 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667
++A L I + + V V D + L + E + SI+
Sbjct: 248 PGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKF-EMGHEIDSIN 306
Query: 668 FSS-ADPTLLASGSDDGSVKLWSINQGVSIGTIKT 701
S P L A + D ++ + G + ++
Sbjct: 307 VSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 355 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 39.8 bits (91), Expect = 0.001
Identities = 17/189 (8%), Positives = 43/189 (22%), Gaps = 35/189 (18%)
Query: 621 SSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680
+ + EG ++ E E + +S L +
Sbjct: 160 TFFMHCRDGSLAKVAFGTEGTPEITHTE-----VFHPEDEFLINHPAYSQ-KAGRLVWPT 213
Query: 681 DDGSVKLWSIN----------QGVSIGTIKTKANVCCVQ------------FPLDSGRSL 718
G + ++ + ++ Q +D
Sbjct: 214 YTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW 273
Query: 719 AFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTL--VSASTDNTLKLWDLS 775
+A + D + + + + D L ++ D TL + D
Sbjct: 274 RHKTASRFVVVLDAKTGE--RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 331
Query: 776 MCTSRVIDT 784
+ + +
Sbjct: 332 --SGEELRS 338
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 50.5 bits (120), Expect = 3e-07
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
+ +PE LA S SD++ GVLL+E+ G + ++ L +
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240
Query: 294 KFPKEASFCLWLLHPEPSGRPKMGELLQ 321
K PS RP E+ Q
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 50.7 bits (119), Expect = 4e-07
Identities = 38/262 (14%), Positives = 78/262 (29%), Gaps = 18/262 (6%)
Query: 568 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 627
S+ G A+ V+ +++++ + I + + S +
Sbjct: 58 SHQTTVAKTSPSGYYCASGDVHGNVRIWDT----TQTTHILKTTIPVFSGPVKDISWDSE 113
Query: 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKL 687
+ E V+ + R + S+DF + P + SGSDD +V +
Sbjct: 114 SKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAI 173
Query: 688 WSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIP-------LC 740
+ T G A D I Y+ + L
Sbjct: 174 FEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233
Query: 741 TLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800
+ D T + SAS D T+K+W+++ + T +++
Sbjct: 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL------KVEKTIPVGTRIEDQQL 287
Query: 801 LSVWDG-YVATGSETNEVFVYH 821
+W + + S + +
Sbjct: 288 GIIWTKQALVSISANGFINFVN 309
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 50.3 bits (118), Expect = 4e-07
Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 656 MREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLD-S 714
S D T +AS S D ++K+W++ TI + Q + +
Sbjct: 233 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT 292
Query: 715 GRSLAFGSADHRIYYYDL 732
++L SA+ I + +
Sbjct: 293 KQALVSISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 48.7 bits (114), Expect = 1e-06
Identities = 12/73 (16%), Positives = 23/73 (31%), Gaps = 3/73 (4%)
Query: 704 NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV--DATTLV 761
G +A SAD I +++ K+ T+ + + LV
Sbjct: 239 GSVFGLTWSPDGTKIASASADKTIKIWNVATLKV-EKTIPVGTRIEDQQLGIIWTKQALV 297
Query: 762 SASTDNTLKLWDL 774
S S + + +
Sbjct: 298 SISANGFINFVNP 310
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 311 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 43.0 bits (99), Expect = 1e-04
Identities = 14/63 (22%), Positives = 19/63 (30%), Gaps = 2/63 (3%)
Query: 631 SQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690
+I N V V EH + S ASG G+V++W
Sbjct: 30 DKIQYCNGTSVY-TVPVGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDT 87
Query: 691 NQG 693
Q
Sbjct: 88 TQT 90
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 50.6 bits (119), Expect = 4e-07
Identities = 9/81 (11%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
+ ++ + V++ +D+ ++ + + +S++ S D + + G G
Sbjct: 244 FSTAVNPAKTRAFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVS-TDGSTVWLGGALG 301
Query: 684 SVKLWSINQGVSIGTIKTKAN 704
+ + G + N
Sbjct: 302 DLAAYDAETLEKKGQVDLPGN 322
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} Length = 337 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Score = 47.9 bits (112), Expect = 3e-06
Identities = 16/189 (8%), Positives = 41/189 (21%), Gaps = 7/189 (3%)
Query: 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667
+ R + ++E +
Sbjct: 145 DGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYT 204
Query: 668 FSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRI 727
D + + + G +V ++ ++ AFG+ + +
Sbjct: 205 ARK-DIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVL 262
Query: 728 YYYDLRNSKIPLCTLIGHNKTVSYVKF-VDATTLVSASTDNTLKLWDLSMCTSRVIDTPL 786
+DL + + + V D +T+ L +D T
Sbjct: 263 ESFDLEKNA--SIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE--TLEKKGQVD 318
Query: 787 HSFTGHTNV 795
++
Sbjct: 319 LPGNASMSL 327
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.3 bits (119), Expect = 4e-07
Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 28/121 (23%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEE----------------- 274
T WY +PE L + + D++ +G + E+F F +
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237
Query: 275 ---KTRTMSSLRHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLN 326
+ + Q + KF + L L P+ R L +
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297
Query: 327 E 327
+
Sbjct: 298 D 298
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 50.3 bits (119), Expect = 6e-07
Identities = 33/212 (15%), Positives = 58/212 (27%), Gaps = 18/212 (8%)
Query: 660 ERRVWSIDFSSADPTLLA-SGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSL 718
E R P L + + D G + L + + I T V + GR L
Sbjct: 18 EDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSAS-GRYL 76
Query: 719 AFGSADHRIYYYDLRNSK----IPLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLW 772
D RI DL + + I S D T+ A +
Sbjct: 77 LVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 136
Query: 773 DLSM--------CTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAF 824
D +DT ++ V + ++ ET +V + +
Sbjct: 137 DGETLEPKQIVSTRGMTVDTQ--TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 194
Query: 825 PMPALSFNFNHADPLSGPETDDAAQFISSVCW 856
+ A L+ D + ++ +
Sbjct: 195 IDNLTVTSIGAAPFLADGGWDSSHRYFMTAAN 226
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.9 bits (110), Expect = 8e-06
Identities = 21/175 (12%), Positives = 46/175 (26%), Gaps = 12/175 (6%)
Query: 640 GVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG--VSIG 697
G + + D +++ + V SA L D + + + +
Sbjct: 42 GQIALVDGDSKKIVKVIDTGY-AVHISRM-SASGRYLLVIGRDARIDMIDLWAKEPTKVA 99
Query: 698 TIKTKAN----VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVK 753
IK + R G+ + + P + TV
Sbjct: 100 EIKIGIEARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQT 158
Query: 754 FV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG 806
+ + AS ++ + ++ T +V+ T + DG
Sbjct: 159 YHPEPRVAAIIASHEHPEFIVNVKE-TGKVLLVNYKDIDNLTVTSIGAAPFLADG 212
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} Length = 426 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.0 bits (87), Expect = 0.004
Identities = 33/238 (13%), Positives = 59/238 (24%), Gaps = 41/238 (17%)
Query: 573 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 632
+D F A N + V + + ++ Y
Sbjct: 211 DGGWDSSHRYFMTAANNSNKVAVIDSK--DRRLSALVDVGKTPHPGRGANFVHPKYGPVW 268
Query: 633 IASSNFEGVVQVWDVSRS-------QVLTEMREHERRVWSIDFSS------ADPTLLASG 679
S +G + + + + E++ I D T
Sbjct: 269 STSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDA 328
Query: 680 SDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPL 739
SV ++ + + + A + + + ++ + N K
Sbjct: 329 RISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY-NKRGDEVWFSVWNGKND- 386
Query: 740 CTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKN 797
S + VD D TLKL V D L + TG NV N
Sbjct: 387 ---------SSALVVVD---------DKTLKLKA------VVKDPRLITPTGKFNVYN 420
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.9 bits (116), Expect = 1e-06
Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 290
+ +PE + S SD++ GV ++E P+ + K + + + +
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK--KMKGPEVMAFIEQGKRME 232
Query: 291 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 336
+ P E + + RP + Q + S+ +
Sbjct: 233 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQR--MRACYYSLASKV 277
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 40.5 bits (94), Expect = 6e-04
Identities = 8/88 (9%), Positives = 27/88 (30%)
Query: 67 SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIES 126
L ++L + + V + Q+ + + V ++ ++ + ++ +
Sbjct: 94 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDF 153
Query: 127 ASCSDSGSDSHEEGLNTQNMETKDLSSP 154
G+D + +P
Sbjct: 154 GLSKALGADDSYYTARSAGKWPLKWYAP 181
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (113), Expect = 2e-06
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 32/130 (24%)
Query: 233 METNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 288
+ T WY P+ L GA + S + D++ G + EL P G + + + +
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
Query: 289 P---------------------------QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 320
P ++ K LL P R E L
Sbjct: 222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
Query: 321 QSEFLNEPRD 330
Q + ++
Sbjct: 282 QHPYFSDFCP 291
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.9 bits (113), Expect = 3e-06
Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 30/126 (23%)
Query: 235 TNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSL--------- 282
T WY +PE L GA D++ +G +L EL PF G+ ++ +
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 222
Query: 283 -------------RHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEF 324
+ P L A L P R + L+ ++
Sbjct: 223 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282
Query: 325 LNEPRD 330
+
Sbjct: 283 FSNRPG 288
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 48.1 bits (113), Expect = 3e-06
Identities = 22/202 (10%), Positives = 44/202 (21%), Gaps = 20/202 (9%)
Query: 634 ASSNFEGVVQVW--DVSRSQVLTEMREHE--RRVWS-----IDFSSADPTLLASGSDDGS 684
+ F G + W L V +S A G
Sbjct: 38 LPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDY 97
Query: 685 VKLWSINQGVSIGTIK--------TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSK 736
V+++ + I I+ V + S L F + +
Sbjct: 98 VEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157
Query: 737 IPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK 796
+ + + ++ A T S +L DL+ +
Sbjct: 158 D---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSS 214
Query: 797 NFVGLSVWDGYVATGSETNEVF 818
+ V + +
Sbjct: 215 QAAQANYPGMLVWAVASSILQG 236
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} Length = 368 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Score = 42.7 bits (99), Expect = 1e-04
Identities = 4/61 (6%), Positives = 16/61 (26%), Gaps = 2/61 (3%)
Query: 642 VQVWDVSRSQVLTEMREHERRVWSIDFSS-ADPTLLASGSDDGSVKLWSINQGVSIGTIK 700
S Q + + +I + A+ + + ++ +++
Sbjct: 296 TSSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354
Query: 701 T 701
Sbjct: 355 L 355
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 47.4 bits (112), Expect = 4e-06
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
Y +PE ++ P + + D + G+L++E+ PF +T + + +
Sbjct: 166 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY-DSNTMKTYEKILNA--ELRFPP 222
Query: 294 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
F ++ L+ + S R + + N P
Sbjct: 223 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 258
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (111), Expect = 5e-06
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ +PE + + SD++ G+ L+ELF G +
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
P E +P RP +++Q
Sbjct: 270 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (111), Expect = 5e-06
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 34/150 (22%)
Query: 237 WYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP--- 289
WY +PE + + DI+ +G ++ E+ F + + ++ PP
Sbjct: 183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242
Query: 290 -------------------------QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSE 323
+L A + +L + R GE L
Sbjct: 243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 302
Query: 324 FLNEPRDSMEEREAAIELREQIDEEELLLE 353
+ D+ +E + + + D+ + L+
Sbjct: 303 YFESLHDTEDEPQVQ-KYDDSFDDVDRTLD 331
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 5e-06
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
+ SPE L + SD++ GV+L+E+ G + + + L +
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 257
Query: 292 LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322
P RP E++ S
Sbjct: 258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (111), Expect = 6e-06
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 291
T Y +PE L A D + LGV+++E+ C PF + + L + P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR- 226
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
EA S LL +P R G E +
Sbjct: 227 --TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 46.6 bits (110), Expect = 9e-06
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 4/96 (4%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
+ A G ++D + LG +LF+L PF + K + + +L
Sbjct: 171 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 230
Query: 294 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
F E S LL + + R E P
Sbjct: 231 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 266
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 9e-06
Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 31/125 (24%)
Query: 237 WYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL 292
WY +PE L G S A DI+ LG + E+ F E + R P +++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 293 LK-----------FPKEA----------------SFCLWLLHPEPSGRPKMGELLQSEFL 325
FPK A S +LH +P+ R L F
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 326 NEPRD 330
+
Sbjct: 287 QDVTK 291
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 1e-05
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 235 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRV---LPPQL 291
+ +PE + + SD++ GVLL+E+F ++ + R+ +
Sbjct: 199 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 258
Query: 292 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 321
E L H EPS RP EL++
Sbjct: 259 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 289
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 2e-05
Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 38/207 (18%)
Query: 198 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIY 256
+L+ + KI D + + + + + WY +PE + + + DI+
Sbjct: 140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR--WYRAPEIMLNSKGYTKSIDIW 197
Query: 257 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ----------------------- 290
+G +L E+ F + L P Q
Sbjct: 198 SVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 257
Query: 291 -----LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQ 344
L +A +L P R ++ + L +L + D +E A +
Sbjct: 258 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 317
Query: 345 IDEEELLLEFLLLVQQRKQESAKKLQD 371
++ ++L E L ++ E + Q
Sbjct: 318 MELDDLPKEKL---KELIFEETARFQP 341
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.2 bits (106), Expect = 2e-05
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 237 WYASPEELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP 289
Y +P+ + G A D + LGVL++EL PF T + + + + + R+L P
Sbjct: 195 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF-TVDGEKNSQAEISRRILKSEP 253
Query: 290 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
+ A LL +P R G E
Sbjct: 254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 293
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 44.5 bits (103), Expect = 3e-05
Identities = 6/78 (7%), Positives = 19/78 (24%)
Query: 624 CWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683
K+ + + + + + +T I + + + S
Sbjct: 207 VNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCN 266
Query: 684 SVKLWSINQGVSIGTIKT 701
+V + T+
Sbjct: 267 TVSVIDTATNTITATMAV 284
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 42.2 bits (97), Expect = 2e-04
Identities = 7/69 (10%), Positives = 21/69 (30%)
Query: 678 SGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI 737
+ S+ ++ + + TI +N D + + + + D + +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV 66
Query: 738 PLCTLIGHN 746
G +
Sbjct: 67 IATVPAGSS 75
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} Length = 301 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Score = 41.8 bits (96), Expect = 2e-04
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 1/77 (1%)
Query: 635 SSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694
+++ + V DV+ ++V + S + + + V +
Sbjct: 7 ANSESDNISVIDVTSNKVTATI-PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN 65
Query: 695 SIGTIKTKANVCCVQFP 711
I T+ ++ V
Sbjct: 66 VIATVPAGSSPQGVAVS 82
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.5 bits (104), Expect = 3e-05
Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 46/162 (28%)
Query: 233 METNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 288
+ T WY +PE + + DI+ +G ++ EL F + + LR P
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 289 PQLLLKF-----------------------------PKEASFCLWLLHPEPSGRPKMGEL 319
LLK P +L + R +
Sbjct: 239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
Query: 320 LQSEFLNEPRD------------SMEEREAAI-ELREQIDEE 348
L + + D S E R+ I E + +E
Sbjct: 299 LAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 340
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 44.4 bits (103), Expect = 4e-05
Identities = 24/180 (13%), Positives = 50/180 (27%), Gaps = 17/180 (9%)
Query: 633 IASSNFEGVVQVWDVSRSQVLTEMR--EHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690
IAS + + VW+++ LT + + +V + S L + V + I
Sbjct: 8 IASPESQQI-HVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRI 66
Query: 691 NQGVSIGTIKTK----ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHN 746
T + ++ + G Y S L +
Sbjct: 67 APDDGALTFAAESALPGSLTHISTDHQ-------GQFVFVGSYNAGNVSVTRLEDGLPVG 119
Query: 747 KTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG 806
+ + + TL + L + S GH ++ ++ +G
Sbjct: 120 VVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFT---VSDDGHLVAQDPAEVTTVEG 176
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} Length = 333 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Score = 38.3 bits (87), Expect = 0.003
Identities = 12/107 (11%), Positives = 29/107 (27%), Gaps = 6/107 (5%)
Query: 608 HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSID 667
++ A+ ++ + Y + AS V + + E + +
Sbjct: 225 NFSDTRWAADIHITPDGRHLYACDRTASLITV--FSVSEDGSVLSKEGFQPTETQPRGFN 282
Query: 668 FSSADPTLLASGSDDGSVKLWSINQG----VSIGTIKTKANVCCVQF 710
+ L+A+G + ++ I G V
Sbjct: 283 VDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVV 329
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.1 bits (103), Expect = 4e-05
Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 49/249 (19%)
Query: 114 VMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 170
H + FI + + + L + E L D L R T
Sbjct: 50 QTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSL-----FDYLNRYTVTVEGM 102
Query: 171 LQLVTAPTNDLSEASCMQSSSAYGTHVV---------LVEGMQEHKILDNRVNVEQVEEK 221
++L + + L+ + + LV+ I D + V + +
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSA 161
Query: 222 KQPFPMKQILLMETNWYASPEELAGA------PVSCASDIYRLGVLLFELF--------- 266
+ + T Y +PE L + +DIY +G++ +E+
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221
Query: 267 ----CPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFC----------LWLLHPEPSG 312
P+ ++ +R V +L P C + +
Sbjct: 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 281
Query: 313 RPKMGELLQ 321
R + +
Sbjct: 282 RLTALRIKK 290
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.0 bits (103), Expect = 5e-05
Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 30/128 (23%)
Query: 233 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST-----------------G 272
+ A + + D++ G +L EL F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 273 EEKTRTMSSLRHRVLPPQL---------LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQS 322
E+ R M+ PQ+ + P EA + C LL P+ R E
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 323 EFLNEPRD 330
F +E RD
Sbjct: 304 SFFDELRD 311
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.4 bits (101), Expect = 9e-05
Identities = 43/311 (13%), Positives = 93/311 (29%), Gaps = 49/311 (15%)
Query: 44 LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103
L V + ++ F ++ + +D ++ Q++ + HS GI
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 140
Query: 104 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163
+ +++PS V+ S + + + + T + T+ +P
Sbjct: 141 IHRDLKPSNIVVKSDCTLKIL----DFGLARTAGTSFMMTPYVVTRYYRAP--------- 187
Query: 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 223
L + D+ C+ L G + V +
Sbjct: 188 ----EVILGMGYKENVDIWSVGCIMGEMVRHKI--LFPGRDYIDQWNK---VIEQLGTPC 238
Query: 224 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLR 283
P MK++ N+ + + AG + S
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFP-------------------KLFPDSLFPADSEH 279
Query: 284 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELRE 343
+++ Q +L +P+ R + + LQ ++N D E ++ +
Sbjct: 280 NKLKASQAR-------DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYD 332
Query: 344 -QIDEEELLLE 353
Q+DE E +E
Sbjct: 333 KQLDEREHTIE 343
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 42.6 bits (99), Expect = 1e-04
Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 31/122 (25%)
Query: 237 WYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEE------------------ 274
WY +P+ L G+ S DI+ +G + E+ F E
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 275 --------KTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 325
K ++ + L + +L +P+ R + L+ +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Query: 326 NE 327
E
Sbjct: 285 KE 286
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 41.7 bits (97), Expect = 3e-04
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 7/96 (7%)
Query: 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 293
+PE + + A D + LGVL++E+ PF + + +V P
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--- 259
Query: 294 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 328
F + LL + + R + ++ N
Sbjct: 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 40.4 bits (93), Expect = 7e-04
Identities = 31/161 (19%), Positives = 46/161 (28%), Gaps = 51/161 (31%)
Query: 225 FPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSS 281
+ ++T Y SPE L GAP C +DI+ L+FEL F +E
Sbjct: 182 YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE-PDEGHSYTKD 240
Query: 282 LRHRVLPPQLLLKFPKE------------------------------------------- 298
H +LL + P
Sbjct: 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 300
Query: 299 ----ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 335
+ F +L +P R G L+ +L + E R
Sbjct: 301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIR 341
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 879 | |||
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 100.0 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 100.0 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 100.0 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 100.0 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.97 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.97 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.97 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.95 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.95 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.94 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.93 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.93 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.93 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.92 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.92 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.89 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.88 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.88 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.87 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.84 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.82 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.74 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.66 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.64 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 99.6 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 99.5 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 99.47 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.47 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.4 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.38 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.36 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 99.3 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 99.27 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 99.24 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.18 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.16 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 99.16 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 99.14 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 99.1 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 99.07 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 98.9 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.76 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 98.75 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 98.67 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.54 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 98.18 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.66 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 97.28 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 97.11 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 97.06 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.03 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 96.91 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 96.82 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 96.82 | |
| d1npea_ | 263 | Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | 96.77 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.6 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 96.51 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 96.5 | |
| d1fwxa2 | 459 | Nitrous oxide reductase, N-terminal domain {Paraco | 96.16 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 96.12 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 95.76 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.51 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 95.19 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 95.07 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 94.59 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 94.46 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.99 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 93.32 | |
| d1ijqa1 | 266 | Low density lipoprotein (LDL) receptor {Human (Hom | 92.94 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 92.58 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 91.58 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 90.38 | |
| d1xipa_ | 381 | Nucleoporin NUP159 {Baker's yeast (Saccharomyces c | 89.47 | |
| d1h6la_ | 353 | Thermostable phytase (3-phytase) {Bacillus amyloli | 89.09 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 88.01 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 85.84 |
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=298.31 Aligned_cols=322 Identities=22% Similarity=0.369 Sum_probs=265.2
Q ss_pred ECCCCCCCEEEEEECCCEEE-EEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCC----------
Q ss_conf 40444681689850475797-8721353458999889999938999999995899299995486447676----------
Q 002801 537 INPFLEGLCKYLSFSKLRVK-ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR---------- 605 (879)
Q Consensus 537 l~~~~d~~i~~w~~~~~~~~-~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~---------- 605 (879)
+.+..++...+|+....+.. ..+. ...+|.+.|+|++|+|||++||+|+ |++|+||++.+......
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~ 108 (388)
T d1erja_ 32 LKKQTNDYYILYNPALPREIDVELH--KSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKD 108 (388)
T ss_dssp SEEECSSCEEEECTTSCCCEEEEEE--EEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-------
T ss_pred CCCCCCCCEEEECCCCCCCEEEEEE--EECCCCCCEEEEEECCCCCEEEEEE-CCEEEEEEECCCCEEEEECCCCCCCCC
T ss_conf 2468897089868877762054107--6079999689999999999999994-994899981364057663166544324
Q ss_pred -CCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCC
Q ss_conf -4113417723589813899817899969996079829999868872889812478749999980399999999949994
Q 002801 606 -DIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGS 684 (879)
Q Consensus 606 -~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~ 684 (879)
..........+...|.+++|+|. +.+|++++.||.|++||..+++....+.+|...|+++.+++ ++..+++|+.++.
T Consensus 109 ~~~~~~~~~~~~~~~V~~l~~s~~-~~~l~s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~ 186 (388)
T d1erja_ 109 PENLNTSSSPSSDLYIRSVCFSPD-GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRT 186 (388)
T ss_dssp ----------CCCCBEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred CCCCCCCCCCCCCCCEEEEEECCC-CCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCEE
T ss_conf 432111014677898899998899-98012134441111211111111111111111111101111-1111112221015
Q ss_pred EEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE-------ECCCCCCEEEEEEC-C
Q ss_conf 999969999148899539966999962899979999967991999985799600699-------81578878999974-9
Q 002801 685 VKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCT-------LIGHNKTVSYVKFV-D 756 (879)
Q Consensus 685 V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~-------~~~h~~~V~~i~fs-~ 756 (879)
+++||..+.........+....++.+.+.+++++++|+.|+.|++||.++... ... ..+|...|+++.|+ +
T Consensus 187 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~s~~ 265 (388)
T d1erja_ 187 VRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL-VERLDSENESGTGHKDSVYSVVFTRD 265 (388)
T ss_dssp EEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE-EEEEC------CCCSSCEEEEEECTT
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCC-CEEECCCCCCCCCCCCCEEEEEECCC
T ss_conf 65410111111000012454421123688787589973898199963455730-00102443334577898789999799
Q ss_pred CCEEEEEECCCCEEEEECCCCCCC------CCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEE
Q ss_conf 988999976990999956999645------56876079718788679999931999999992999199982599997200
Q 002801 757 ATTLVSASTDNTLKLWDLSMCTSR------VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALS 830 (879)
Q Consensus 757 ~~~l~sgs~D~~i~iwd~~~~~~~------~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~ 830 (879)
+.+|++++.|+.|++||+...... ....+......|...+.+++|+|++.+|++|+.||.|++|++..++++..
T Consensus 266 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 345 (388)
T d1erja_ 266 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 345 (388)
T ss_dssp SSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEE
T ss_conf 99999997899289875157764321013444200110124553278999889999999996989799999999969999
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEE------ECCCCCEEEEEECCCCEEEEEE
Q ss_conf 03479999999987878997999999------0799939999937984999991
Q 002801 831 FNFNHADPLSGPETDDAAQFISSVCW------RGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 831 ~~~~~~~~~~~~~~~~h~~~V~~v~~------~p~~~~~l~s~~~Dg~I~iw~l 878 (879)
++ +|.+.|.+++| +|++. +|++|+.||.|+||++
T Consensus 346 l~-------------~H~~~V~~~~~~~~~~~spd~~-~l~s~s~Dg~I~iW~~ 385 (388)
T d1erja_ 346 LQ-------------GHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKY 385 (388)
T ss_dssp EE-------------CCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEE
T ss_pred EE-------------CCCCCEEEEEEECCCCCCCCCC-EEEEEECCCEEEEEEE
T ss_conf 96-------------8899789999846742589999-9999918997999762
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=294.68 Aligned_cols=284 Identities=12% Similarity=0.227 Sum_probs=245.5
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 89998899999389999999958992999954864476764113417723589813899817899969996079829999
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 566 ~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iw 645 (879)
+|.+.|++++|+|+|++||||+ ||.|+|||+........ ........|...|.+++|+|. ++.|++++.||.|++|
T Consensus 49 ~H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~~~--~~~~~~~~h~~~I~~v~~s~d-g~~l~s~~~dg~i~iw 124 (337)
T d1gxra_ 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSP--VSQLDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSIW 124 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSC--SEEEECSCTTSBEEEEEECTT-SSEEEEEESSSEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCCCCCE--EEEEEECCCCCCEEEEEECCC-CCEEEEEECCCCCCCC
T ss_conf 9999289999989999999997-99889977367763311--687640488996899998679-9889886123321111
Q ss_pred ECCCC--EEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC-CCCEEEEEEECCCCCEEEEEE
Q ss_conf 86887--288981247874999998039999999994999499996999914889953-996699996289997999996
Q 002801 646 DVSRS--QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGS 722 (879)
Q Consensus 646 d~~t~--~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs 722 (879)
|+... +....+..|...+.++.|+| ++..+++++.|+.|++|++.+++....... ...+.+++|+++ +..+++++
T Consensus 125 d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-~~~~~~~~ 202 (337)
T d1gxra_ 125 DLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND-GTKLWTGG 202 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT-SSEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC
T ss_conf 111111111111111111111111111-1111111111111111111111111111111111110123444-32112235
Q ss_pred CCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEE
Q ss_conf 799199998579960069981578878999974-9988999976990999956999645568760797187886799999
Q 002801 723 ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGL 801 (879)
Q Consensus 723 ~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 801 (879)
.|+.+++||+++.+. +..+ .|...|.++.|+ ++..+++++.|+.+++||++.. . ......|...+++++|
T Consensus 203 ~d~~v~i~d~~~~~~-~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~------~-~~~~~~~~~~i~~v~~ 273 (337)
T d1gxra_ 203 LDNTVRSWDLREGRQ-LQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKP------D-KYQLHLHESCVLSLKF 273 (337)
T ss_dssp TTSEEEEEETTTTEE-EEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSS------C-EEEECCCSSCEEEEEE
T ss_pred CCCCCCCCCCCCCEE-ECCC-CCCCCEEEEEECCCCCCCCEECCCCCCCCCCCCCC------C-CCCCCCCCCCCCEEEE
T ss_conf 665532111111000-0024-66661579997153030000002564211111111------1-0000124565416999
Q ss_pred ECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 319999999929991999825999972000347999999998787899799999907999399999379849999919
Q 002801 802 SVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 802 sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw~lv 879 (879)
+|++.+|++|+.|+.|++|+...++++.... |...|.+++|+|++. +|++++.||.|+||+|+
T Consensus 274 s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~--------------~~~~v~~~~~s~d~~-~l~t~s~D~~I~vWdl~ 336 (337)
T d1gxra_ 274 AYCGKWFVSTGKDNLLNAWRTPYGASIFQSK--------------ESSSVLSCDISVDDK-YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEE--------------CSSCEEEEEECTTSC-EEEEEETTSCEEEEEEE
T ss_pred CCCCCEEEEEECCCEEEEEECCCCCEEEECC--------------CCCCEEEEEEECCCC-EEEEEECCCEEEEEEEE
T ss_conf 8999999999489969999899997999926--------------999879999927999-99999089969999778
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-45 Score=281.49 Aligned_cols=284 Identities=19% Similarity=0.301 Sum_probs=254.9
Q ss_pred CCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCE
Q ss_conf 34589998899999389999999958992999954864476764113417723589813899817899969996079829
Q 002801 563 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 563 ~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V 642 (879)
.|.||.+.|++++|+|++++||||+.|++|+||++.+.... .....|...|.+++|++. +..++++..++.+
T Consensus 12 ~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~-------~~~~~h~~~V~~~~~~~~-~~~~~~~~~~~~~ 83 (317)
T d1vyhc1 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-------RTLKGHTDSVQDISFDHS-GKLLASCSADMTI 83 (317)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-------EEECCCSSCEEEEEECTT-SSEEEEEETTSCC
T ss_pred EECCCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEE-------EEEECCCCCEEEEEEECC-CCCCCCCCCCCCC
T ss_conf 98588887689999389899999938992999989999799-------999578886777763011-1101111111110
Q ss_pred EEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC-CCCEEEEEEECCCCCEEEEE
Q ss_conf 99986887288981247874999998039999999994999499996999914889953-99669999628999799999
Q 002801 643 QVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 643 ~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tg 721 (879)
..|+....+....+..|...+.++.|++ ++..+++++.|+.+++||++++..+..+.. ...+.+++|+|+ +.+++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 161 (317)
T d1vyhc1 84 KLWDFQGFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD-GTLIASC 161 (317)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT-SSEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEEECCC-CCCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEECCCC-CCEEEEE
T ss_conf 1110011111111000000000000169-9855776526752357511443034687167776300001667-9999999
Q ss_pred ECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-C--------------------CCEEEEEECCCCEEEEECCCCCCC
Q ss_conf 6799199998579960069981578878999974-9--------------------988999976990999956999645
Q 002801 722 SADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-D--------------------ATTLVSASTDNTLKLWDLSMCTSR 780 (879)
Q Consensus 722 s~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~--------------------~~~l~sgs~D~~i~iwd~~~~~~~ 780 (879)
+.|+.|++|++++... ...+.+|...+.++.|+ + +..+++++.|+.|++||++++
T Consensus 162 ~~d~~v~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~--- 237 (317)
T d1vyhc1 162 SNDQTVRVWVVATKEC-KAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG--- 237 (317)
T ss_dssp ETTSCEEEEETTTCCE-EEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT---
T ss_pred ECCCEEEEEEECCCEE-EEEEECCCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCC---
T ss_conf 2798299975125403-478824778733799863256411103456303430258861475169978999888999---
Q ss_pred CCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCC
Q ss_conf 56876079718788679999931999999992999199982599997200034799999999878789979999990799
Q 002801 781 VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQS 860 (879)
Q Consensus 781 ~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 860 (879)
.++.++.+|...+.+++|+|++.+|++|+.||.|++|++..++++..+. +|.+.|++++|+|++
T Consensus 238 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------~h~~~V~~~~~s~~~ 301 (317)
T d1vyhc1 238 ---MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN-------------AHEHFVTSLDFHKTA 301 (317)
T ss_dssp ---EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE-------------CCSSCEEEEEECSSS
T ss_pred ---CEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-------------CCCCCEEEEEECCCC
T ss_conf ---6889996889987999987999999999798949999999991999992-------------899988999994999
Q ss_pred CCEEEEEECCCCEEEEE
Q ss_conf 93999993798499999
Q 002801 861 SNTLVAANSSGNIKILE 877 (879)
Q Consensus 861 ~~~l~s~~~Dg~I~iw~ 877 (879)
. +|++++.||.|+||+
T Consensus 302 ~-~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 302 P-YVVTGSVDQTVKVWE 317 (317)
T ss_dssp S-CEEEEETTSEEEEEC
T ss_pred C-EEEEEECCCEEEEEC
T ss_conf 9-999992899499829
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=280.45 Aligned_cols=268 Identities=21% Similarity=0.275 Sum_probs=234.2
Q ss_pred ECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECC
Q ss_conf 40444681689850475797872135345899988999993899999999589929999548644767641134177235
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 616 (879)
Q Consensus 537 l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~ 616 (879)
+++. ||.+++|++.+......+......+|.+.|.+++|+||+++|++|+.|+.|++|++..... ........|
T Consensus 67 atg~-dg~V~iWd~~~~~~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~~ 140 (337)
T d1gxra_ 67 YTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP-----RIKAELTSS 140 (337)
T ss_dssp EEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-------EEEEEEECS
T ss_pred EEEE-CCEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCC-----CCCCCCCCC
T ss_conf 9997-9988997736776331168764048899689999867998898861233211111111111-----111111111
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEE
Q ss_conf 89813899817899969996079829999868872889812478749999980399999999949994999969999148
Q 002801 617 RSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 617 ~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i 696 (879)
...+.+++|++. +..+++++.|+.|.+|++.+++.......|...|++++|++ ++..+++|+.|+.+++||+++++.+
T Consensus 141 ~~~v~~~~~~~~-~~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~~~~~~~~~~d~~v~i~d~~~~~~~ 218 (337)
T d1gxra_ 141 APACYALAISPD-SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN-DGTKLWTGGLDNTVRSWDLREGRQL 218 (337)
T ss_dssp SSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 111111111111-11111111111111111111111111111111111012344-4321122356655321111110000
Q ss_pred EEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECC
Q ss_conf 89953996699996289997999996799199998579960069981578878999974-99889999769909999569
Q 002801 697 GTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLS 775 (879)
Q Consensus 697 ~~~~~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~ 775 (879)
..+.+...|.+++|+|+ +.++++|+.|+.+++||++... ......|...|+++.|+ ++++|++++.|+.|++||+.
T Consensus 219 ~~~~~~~~i~~l~~~~~-~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~ 295 (337)
T d1gxra_ 219 QQHDFTSQIFSLGYCPT-GEWLAVGMESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp EEEECSSCEEEEEECTT-SSEEEEEETTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCCCCCEEEEEECCC-CCCCCEECCCCCCCCCCCCCCC--CCCCCCCCCCCCEEEECCCCCEEEEEECCCEEEEEECC
T ss_conf 02466661579997153-0300000025642111111111--00001245654169998999999999489969999899
Q ss_pred CCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEC
Q ss_conf 99645568760797187886799999319999999929991999825
Q 002801 776 MCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 776 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~ 822 (879)
.+ .++..+. |...|++++|+|++++|++|+.|+.|++|++
T Consensus 296 ~~------~~~~~~~-~~~~v~~~~~s~d~~~l~t~s~D~~I~vWdl 335 (337)
T d1gxra_ 296 YG------ASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TC------CEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CC------CEEEECC-CCCCEEEEEEECCCCEEEEEECCCEEEEEEE
T ss_conf 99------7999926-9998799999279999999908996999977
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=305.28 Aligned_cols=226 Identities=14% Similarity=0.147 Sum_probs=174.2
Q ss_pred CCCCCCCCCCCC----CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHH
Q ss_conf 554231025899----9832222357344204654567898776344434457528887608853345306999987856
Q 002801 7 RGERFGVRGDDS----NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~----~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~ 82 (879)
.|+.++++-..- ....+.+|.. .+...+|+|++.+++ ++.++ ...|+||||++||+|.+++.+ ..+++.
T Consensus 44 ~~~~vAvK~~~~~~~~~~~~~~~E~~--il~~l~HpnIv~~~~-~~~~~--~~~~ivmEy~~gg~L~~~~~~--~~l~~~ 116 (293)
T d1yhwa1 44 TGQEVAIRQMNLQQQPKKELIINEIL--VMRENKNPNIVNYLD-SYLVG--DELWVVMEYLAGGSLTDVVTE--TCMDEG 116 (293)
T ss_dssp TCCEEEEEEEEGGGCSCHHHHHHHHH--HHHHCCCTTBCCEEE-EEEET--TEEEEEEECCTTCBHHHHHHH--SCCCHH
T ss_pred CCCEEEEEEEECCCCHHHHHHHHHHH--HHHHCCCCCEEEEEE-EEEEC--CEEEEEEEECCCCCHHHHHHC--CCCCHH
T ss_conf 99899999984301727999999999--998679998805857-79889--998999970379808988641--599999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 88999999999998521037110367886234244787245306655698999866665456544468899996112242
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
+++.|++||+.||.|||++||+||||||+|||++..+.+|++|||+++.......
T Consensus 117 ~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~------------------------- 171 (293)
T d1yhwa1 117 QIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------------------------- 171 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCC-------------------------
T ss_conf 9999999999999999987972267768886887899686425156413213666-------------------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 43012235433247876543342333566557500001353322223333210000123579884310133456200441
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
.....+||+.|+|||
T Consensus 172 -----------------------------------------------------------------~~~~~~gt~~Y~aPE 186 (293)
T d1yhwa1 172 -----------------------------------------------------------------KRSTMVGTPYWMAPE 186 (293)
T ss_dssp -----------------------------------------------------------------CBCCCCSCGGGCCHH
T ss_pred -----------------------------------------------------------------CCCCCCCCCCCCCHH
T ss_conf -----------------------------------------------------------------444444477736826
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCC-CCHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 3269998865860048999999625---89998155768763024579-9022203914689999704999999999889
Q 002801 243 ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 243 ~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
++.+.+|+.++|||||||++|||++ ||.................. .+.+...++.+.+|+.+||..||.+|||+.|
T Consensus 187 ~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e 266 (293)
T d1yhwa1 187 VVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKE 266 (293)
T ss_dssp HHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHCCCCCCCHHCEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf 64479988012031372999998048899899799999999985799988885537999999999986699668909999
Q ss_pred HHHCCCCCCCC
Q ss_conf 86152345996
Q 002801 319 LLQSEFLNEPR 329 (879)
Q Consensus 319 il~~~~l~~~~ 329 (879)
+|+||||+...
T Consensus 267 il~Hp~~~~~~ 277 (293)
T d1yhwa1 267 LLQHQFLKIAK 277 (293)
T ss_dssp HTTCGGGGGCC
T ss_pred HHCCHHHCCCC
T ss_conf 96499657788
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=306.65 Aligned_cols=230 Identities=13% Similarity=0.137 Sum_probs=176.7
Q ss_pred CCCCCCCCCCCCC-----CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCC
Q ss_conf 5554231025899-----98322223573442046545678987763444344575288876088533453069999878
Q 002801 6 LRGERFGVRGDDS-----NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (879)
Q Consensus 6 ~~~~~~~~~~~~~-----~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~ 80 (879)
..|+.++++-... ....|++|.. .+...+|+|++.+++ ++.+ ....|+||||++||+|.++|++. ..++
T Consensus 28 ~~~~~vAiK~i~~~~~~~~~~~~~~Ei~--~l~~l~HpnIv~~~~-~~~~--~~~~~ivmEy~~gg~L~~~l~~~-~~l~ 101 (271)
T d1nvra_ 28 VTEEAVAVKIVDMKRAVDCPENIKKEIC--INKMLNHENVVKFYG-HRRE--GNIQYLFLEYCSGGELFDRIEPD-IGMP 101 (271)
T ss_dssp TTCCEEEEEEEECC-------CHHHHHH--HHHTCCCTTBCCEEE-EEEE--TTEEEEEEECCTTEEGGGGSBTT-TBCC
T ss_pred CCCCEEEEEEEEHHHCCHHHHHHHHHHH--HHHHCCCCCEEEEEE-EECC--CCEEEEEEECCCCCCHHHHHHCC-CCCC
T ss_conf 9997999999845664127999999999--998579988846965-4046--74367988645898089997537-9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 56889999999999985210371103678862342447872453066556989998666654565444688999961122
Q 002801 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (879)
Q Consensus 81 ~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (879)
+.+++.|++||+.||.|||++||+||||||+|||++..+.+|++|||+++........
T Consensus 102 e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~---------------------- 159 (271)
T d1nvra_ 102 EPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE---------------------- 159 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCHHHEEECCCCCC----------------------
T ss_conf 9999999999999999999759835754689978878998798323142240468865----------------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 42430122354332478765433423335665575000013533222233332100001235798843101334562004
Q 002801 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (879)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (879)
...+..+||+.|||
T Consensus 160 ------------------------------------------------------------------~~~~~~~GT~~Y~A 173 (271)
T d1nvra_ 160 ------------------------------------------------------------------RLLNKMCGTLPYVA 173 (271)
T ss_dssp ------------------------------------------------------------------CCBCCCCSCGGGSC
T ss_pred ------------------------------------------------------------------CCCCCEEECCCCCC
T ss_conf ------------------------------------------------------------------31113255747428
Q ss_pred CCCCCCCCC-CCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCC-CCCCCHHHCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 413269998-865860048999999625---89998155768763024-5799022203914689999704999999999
Q 002801 241 PEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 315 (879)
Q Consensus 241 PE~~~~~~~-s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 315 (879)
||++.+.++ +.++|||||||+||||++ ||............... ...++.+...++.+.+|+.+||+.||.+|||
T Consensus 174 PE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t 253 (271)
T d1nvra_ 174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 253 (271)
T ss_dssp THHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred HHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCC
T ss_conf 72861899999710161737999999829978888985999999986388878864469999999999976799668909
Q ss_pred HHHHHHCCCCCCCC
Q ss_conf 88986152345996
Q 002801 316 MGELLQSEFLNEPR 329 (879)
Q Consensus 316 ~~eil~~~~l~~~~ 329 (879)
+.|+|+||||+...
T Consensus 254 ~~eil~hpwf~~~l 267 (271)
T d1nvra_ 254 IPDIKKDRWYNKPL 267 (271)
T ss_dssp HHHHTTCTTTTCCC
T ss_pred HHHHHCCHHHCCCC
T ss_conf 99996198458598
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8e-44 Score=272.07 Aligned_cols=297 Identities=13% Similarity=0.131 Sum_probs=233.0
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 99988999993899999999589929999548644767641134177235898138998178999699960798299998
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWD 646 (879)
Q Consensus 567 h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd 646 (879)
..++|+|++|+||+++||+|+.|+.|+||+.++... ........|...|.+++|+|. +++|++++.|+.|++||
T Consensus 6 ~~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~-----~~~~~l~gH~~~V~~l~fsp~-~~~l~s~s~D~~i~vWd 79 (371)
T d1k8kc_ 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW-----VQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWT 79 (371)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE-----EEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEECCCCCEEEEEECCCEEEEEECCCCCE-----EEEEEECCCCCCEEEEEECCC-CCEEEEEECCCEEEEEE
T ss_conf 998838999989999999994889899998889978-----999995588998889999799-99999997999399986
Q ss_pred CCCCEE--EEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE-----CCCCEEEEEEECCCCCEEE
Q ss_conf 688728--898124787499999803999999999499949999699991488995-----3996699996289997999
Q 002801 647 VSRSQV--LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-----TKANVCCVQFPLDSGRSLA 719 (879)
Q Consensus 647 ~~t~~~--~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~-----~~~~v~~v~~~p~~~~~l~ 719 (879)
+.+++. ...+..|...|+++.|+| +++.+++|+.|+.+++|++.......... +...|.+++|+|+ +.+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~i~~~p-~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~l~ 157 (371)
T d1k8kc_ 80 LKGRTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPN-SVLLA 157 (371)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTT-SSEEE
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEE
T ss_conf 20332110012232211000111111-12110000025763025442033433111001011122211111111-11100
Q ss_pred EEECCCEEEEEECCCCC-----------------EEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCC
Q ss_conf 99679919999857996-----------------0069981578878999974-99889999769909999569996455
Q 002801 720 FGSADHRIYYYDLRNSK-----------------IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRV 781 (879)
Q Consensus 720 tgs~D~~I~iwDl~~~~-----------------~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~ 781 (879)
+|+.|+.|++||+.... ..+....+|...|.++.|+ +++.|++++.|+.|++||+..+
T Consensus 158 s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~---- 233 (371)
T d1k8kc_ 158 AGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK---- 233 (371)
T ss_dssp EEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT----
T ss_pred CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECC----
T ss_conf 0134767999840157643100122111111110112440476674789875123321000014786058864101----
Q ss_pred CCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCC------------------------
Q ss_conf 68760797187886799999319999999929991999825999972000347999------------------------
Q 002801 782 IDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHAD------------------------ 837 (879)
Q Consensus 782 ~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~------------------------ 837 (879)
.++..+.+|..++++++|+|++.+|++|+ |+.+++|..........+......
T Consensus 234 --~~~~~~~~~~~~v~s~~fs~d~~~la~g~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (371)
T d1k8kc_ 234 --MAVATLASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASS 310 (371)
T ss_dssp --TEEEEEECSSCCEEEEEEEETTEEEEEET-TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC--
T ss_pred --CCEEEEECCCCCCEEEEECCCCCEEEEEC-CCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEE
T ss_conf --21000001466520365469997999981-992678776089862887202067654212462200168506520587
Q ss_pred ---CCCCCCC-CCCCCCEEEEEEECCCC---CEEEEEECCCCEEEEEE
Q ss_conf ---9999987-87899799999907999---39999937984999991
Q 002801 838 ---PLSGPET-DDAAQFISSVCWRGQSS---NTLVAANSSGNIKILEM 878 (879)
Q Consensus 838 ---~~~~~~~-~~h~~~V~~v~~~p~~~---~~l~s~~~Dg~I~iw~l 878 (879)
....... ..|.+.|+++++.+... ..++|++.||.|++|++
T Consensus 311 ~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~ 358 (371)
T d1k8kc_ 311 EGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDV 358 (371)
T ss_dssp -------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEH
T ss_pred ECCCCCCCEECCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEEEC
T ss_conf 124556614125556988999994899865679999918993999969
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=0 Score=303.67 Aligned_cols=228 Identities=16% Similarity=0.187 Sum_probs=176.5
Q ss_pred CCCCCCCCCCCCCCC----CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHH
Q ss_conf 554231025899983----2222357344204654567898776344434457528887608853345306999987856
Q 002801 7 RGERFGVRGDDSNDF----ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~ 82 (879)
.|+.++++-...... .+++|. -.+...+|+|++.+++ ++.+ ....|+||||++||+|.++|......+++.
T Consensus 50 ~g~~vAvK~i~~~~~~~~~~~~~E~--~il~~l~HpnIv~~~~-~~~~--~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~ 124 (350)
T d1koaa2 50 TGNNFAAKFVMTPHESDKETVRKEI--QTMSVLRHPTLVNLHD-AFED--DNEMVMIYEFMSGGELFEKVADEHNKMSED 124 (350)
T ss_dssp TTEEEEEEEECCCSHHHHHHHHHHH--HHHHHTCCTTBCCEEE-EEEE--TTEEEEEECCCCSCBHHHHHTCTTSCBCHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHH--HHHHHCCCCCCCCEEE-EEEE--CCEEEEEEECCCCCCHHHHHHHHCCCCCHH
T ss_conf 9989999998452431699999999--9998679979992999-9998--999999998579988999997623789999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC--CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 88999999999998521037110367886234244--7872453066556989998666654565444688999961122
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~--~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (879)
+++.|++||+.||.|||++|||||||||+|||++. .+.+|++|||+++......
T Consensus 125 ~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~------------------------ 180 (350)
T d1koaa2 125 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ------------------------ 180 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECHHHEEECCCCCCEEEEEECCHHEECCCCC------------------------
T ss_conf 99999999999999997569760001546736416889869995452104425654------------------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 42430122354332478765433423335665575000013533222233332100001235798843101334562004
Q 002801 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (879)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (879)
......||++|||
T Consensus 181 -------------------------------------------------------------------~~~~~~gT~~Y~a 193 (350)
T d1koaa2 181 -------------------------------------------------------------------SVKVTTGTAEFAA 193 (350)
T ss_dssp -------------------------------------------------------------------CEEEECSCTTTCC
T ss_pred -------------------------------------------------------------------CCCEECCCCCCCC
T ss_conf -------------------------------------------------------------------3200068624218
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCC--CCCCHHHCCCHHHHHHHHHHCCCCCCCCCC
Q ss_conf 413269998865860048999999625---899981557687630245--799022203914689999704999999999
Q 002801 241 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRPK 315 (879)
Q Consensus 241 PE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 315 (879)
||++.+.+|+.++|||||||++|||++ ||................ ..+..+...++.+.+||.+||+.||.+|||
T Consensus 194 PEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t 273 (350)
T d1koaa2 194 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT 273 (350)
T ss_dssp HHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCC
T ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCC
T ss_conf 89975899872676554659999998598998997999999999847889894223589999999999975689667908
Q ss_pred HHHHHHCCCCCCCCC
Q ss_conf 889861523459967
Q 002801 316 MGELLQSEFLNEPRD 330 (879)
Q Consensus 316 ~~eil~~~~l~~~~~ 330 (879)
+.|+|+||||.....
T Consensus 274 ~~eil~hp~~~~~~~ 288 (350)
T d1koaa2 274 IHQALEHPWLTPGNA 288 (350)
T ss_dssp HHHHHHSTTTSCTTC
T ss_pred HHHHHCCCCCCCCCC
T ss_conf 999862913288988
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=0 Score=302.66 Aligned_cols=231 Identities=17% Similarity=0.178 Sum_probs=177.7
Q ss_pred CCCCCCCCCCCCCCCCCC--CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHH
Q ss_conf 555423102589998322--223573442046545678987763444344575288876088533453069999878568
Q 002801 6 LRGERFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYE 83 (879)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~ 83 (879)
..|+.++++-.......- +-+++...+...+|+|++.+++ ++.+ ....|+|||||+||+|.+++.+....+++.+
T Consensus 52 ~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~-~~~~--~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~ 128 (352)
T d1koba_ 52 ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD-AFED--KYEMVLILEFLSGGELFDRIAAEDYKMSEAE 128 (352)
T ss_dssp TTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEE-EEEC--SSEEEEEEECCCCCBHHHHTTCTTCCBCHHH
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEE-EEEE--CCEEEEEEECCCCCHHHHHHHHCCCCCCHHH
T ss_conf 999799999988726467999999999998679979891999-9998--9999999982899808888986389989999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC--CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 899999999999852103711036788623424--478724530665569899986666545654446889999611224
Q 002801 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~--~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (879)
++.|++||+.||.|||++||+||||||+|||++ ..+.+|++|||+++......
T Consensus 129 ~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~------------------------- 183 (352)
T d1koba_ 129 VINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE------------------------- 183 (352)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-------------------------
T ss_pred HHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEECCCCC-------------------------
T ss_conf 9999999999999999779265131445531134678848995256303437887-------------------------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 24301223543324787654334233356655750000135332222333321000012357988431013345620044
Q 002801 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (879)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (879)
......||+.|+||
T Consensus 184 ------------------------------------------------------------------~~~~~~gt~~y~aP 197 (352)
T d1koba_ 184 ------------------------------------------------------------------IVKVTTATAEFAAP 197 (352)
T ss_dssp ------------------------------------------------------------------CEEEECSSGGGCCH
T ss_pred ------------------------------------------------------------------CEEECCCCCCCCCH
T ss_conf ------------------------------------------------------------------20100476453489
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCC--CCHHHCCCHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 13269998865860048999999625---89998155768763024579--90222039146899997049999999998
Q 002801 242 EELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 242 E~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
|++.+..|+.++|||||||+||||++ ||.................. ++.+...++.+.+|+.+||+.||.+|||+
T Consensus 198 E~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~ 277 (352)
T d1koba_ 198 EIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTV 277 (352)
T ss_dssp HHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCH
T ss_conf 99747998976333898999999996889989979999999998478898930024799999999999756996689189
Q ss_pred HHHHHCCCCCCCCC
Q ss_conf 89861523459967
Q 002801 317 GELLQSEFLNEPRD 330 (879)
Q Consensus 317 ~eil~~~~l~~~~~ 330 (879)
.|+|+||||+....
T Consensus 278 ~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 278 HDALEHPWLKGDHS 291 (352)
T ss_dssp HHHHTSTTTSSCCT
T ss_pred HHHHCCHHHCCCCC
T ss_conf 99960973488820
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=300.50 Aligned_cols=199 Identities=17% Similarity=0.193 Sum_probs=163.6
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 42046545678987763444344575288876088533453069999878568899999999999852103711036788
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP 110 (879)
.+...+|+|++.+++ ++.++ ...|+||||++||+|.++|.+. ..+++.+++.|++||+.||+|||++||+||||||
T Consensus 59 il~~l~hpnIv~~~~-~~~~~--~~~~ivmEy~~~g~L~~~l~~~-~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp 134 (263)
T d2j4za1 59 IQSHLRHPNILRLYG-YFHDA--TRVYLILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCHSKRVIHRDIKP 134 (263)
T ss_dssp HHHTCCCTTBCCEEE-EEECS--SEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred HHHHCCCCCCCEEEE-EEEEC--CEEEEEEEECCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
T ss_conf 998568888885999-99989--9989998504798589887504-8999999999999999999999988946522023
Q ss_pred CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 62342447872453066556989998666654565444688999961122424301223543324787654334233356
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++..+.+|++|||+++.....
T Consensus 135 ~Nill~~~~~~kl~DFG~a~~~~~~------------------------------------------------------- 159 (263)
T d2j4za1 135 ENLLLGSAGELKIADFGWSVHAPSS------------------------------------------------------- 159 (263)
T ss_dssp GGEEECTTSCEEECCCCSCSCCCCC-------------------------------------------------------
T ss_pred CCCEECCCCCEEECCCCEEEECCCC-------------------------------------------------------
T ss_conf 4414668998711555633544888-------------------------------------------------------
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---
Q ss_conf 65575000013533222233332100001235798843101334562004413269998865860048999999625---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~--- 267 (879)
......||+.|||||++.+.+|+.++|||||||+||||++
T Consensus 160 -------------------------------------~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~ 202 (263)
T d2j4za1 160 -------------------------------------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP 202 (263)
T ss_dssp -------------------------------------CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred -------------------------------------CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf -------------------------------------5235578876349999758998931440467599999832999
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 899981557687630245799022203914689999704999999999889861523459
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 268 pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~ 327 (879)
||................ ++.+...++++.+|+.+||++||.+|||+.|+|+||||..
T Consensus 203 Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 203 PFEANTYQETYKRISRVE--FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp TTCCSSHHHHHHHHHTTC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred CCCCCCHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 988899999999997189--9998668999999999976479768909999971907078
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=297.87 Aligned_cols=226 Identities=14% Similarity=0.081 Sum_probs=172.8
Q ss_pred CCCCCCCCCCCCCCC---C----CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCC
Q ss_conf 555423102589998---3----222235734420465456789877634443445752888760885334530699998
Q 002801 6 LRGERFGVRGDDSND---F----ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS 78 (879)
Q Consensus 6 ~~~~~~~~~~~~~~~---~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~ 78 (879)
..|+.++++-..... . .|.+| ...+...+|+|++.+++ ++.++ ...|+|||||.||+|..++... ..
T Consensus 38 ~~~~~vAvK~i~~~~~~~~~~~~~~~~E--i~il~~l~HpnIv~~~~-~~~~~--~~~~iv~E~~~~g~l~~~~~~~-~~ 111 (309)
T d1u5ra_ 38 RNSEVVAIKKMSYSGKQSNEKWQDIIKE--VRFLQKLRHPNTIQYRG-CYLRE--HTAWLVMEYCLGSASDLLEVHK-KP 111 (309)
T ss_dssp TTTEEEEEEEEECCSSCHHHHHHHHHHH--HHHHTTCCCTTBCCEEE-EEEET--TEEEEEEECCSEEHHHHHHHHT-SC
T ss_pred CCCCEEEEEEECHHHCCCHHHHHHHHHH--HHHHHHCCCCCEEEEEE-EEEEC--CEEEEEEEECCCCCHHHHHHHC-CC
T ss_conf 9993999999844443588999999999--99999778999823899-99989--9889999806999457899737-99
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 78568899999999999852103711036788623424478724530665569899986666545654446889999611
Q 002801 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (879)
Q Consensus 79 ~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (879)
+++.+++.|++||+.||.|||++||+||||||+|||++..+.+|++|||++......
T Consensus 112 l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~----------------------- 168 (309)
T d1u5ra_ 112 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----------------------- 168 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-----------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCEEEECCCCCEEEEECCCCCCCCCC-----------------------
T ss_conf 999999999999999999998689766678842179879997898443653346778-----------------------
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 22424301223543324787654334233356655750000135332222333321000012357988431013345620
Q 002801 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (879)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (879)
...+||+.|
T Consensus 169 -----------------------------------------------------------------------~~~~GT~~Y 177 (309)
T d1u5ra_ 169 -----------------------------------------------------------------------NSFVGTPYW 177 (309)
T ss_dssp -----------------------------------------------------------------------CCCCSCGGG
T ss_pred -----------------------------------------------------------------------CCCCCCCCC
T ss_conf -----------------------------------------------------------------------731347663
Q ss_pred ECCCCCCC---CCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCC
Q ss_conf 04413269---998865860048999999625---899981557687630245799022203914689999704999999
Q 002801 239 ASPEELAG---APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSG 312 (879)
Q Consensus 239 ~aPE~~~~---~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 312 (879)
||||++.+ ..|+.++|||||||++|||++ ||..................+......++.+.+|+.+||+.||.+
T Consensus 178 ~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~ 257 (309)
T d1u5ra_ 178 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQD 257 (309)
T ss_dssp CCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGG
T ss_pred CCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHH
T ss_conf 68899834678886721454558999999987889999979999999998289998887888999999999977379657
Q ss_pred CCCHHHHHHCCCCCCCCCC
Q ss_conf 9998898615234599671
Q 002801 313 RPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 313 Rpt~~eil~~~~l~~~~~~ 331 (879)
|||+.|+|+||||.....+
T Consensus 258 Rpt~~ell~Hp~~~~~~~~ 276 (309)
T d1u5ra_ 258 RPTSEVLLKHRFVLRERPP 276 (309)
T ss_dssp SCCHHHHTTCHHHHSCCCT
T ss_pred CCCHHHHHHCHHHCCCCCC
T ss_conf 9189999719975378993
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=0 Score=298.91 Aligned_cols=226 Identities=16% Similarity=0.158 Sum_probs=174.7
Q ss_pred CCCCCCCCCCCC-----CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCH
Q ss_conf 554231025899-----983222235734420465456789877634443445752888760885334530699998785
Q 002801 7 RGERFGVRGDDS-----NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81 (879)
Q Consensus 7 ~~~~~~~~~~~~-----~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~ 81 (879)
.|+.++++-... ....|..|. -.+...+|+|++.+++ ++.++ ...|+|||||+||+|.++|... ..+++
T Consensus 33 ~~~~vAvK~i~~~~~~~~~~~~~~Ei--~il~~l~HpnIv~l~~-~~~~~--~~~~lvmE~~~gg~L~~~l~~~-~~l~e 106 (307)
T d1a06a_ 33 TQKLVAIKCIAKKALEGKEGSMENEI--AVLHKIKHPNIVALDD-IYESG--GHLYLIMQLVSGGELFDRIVEK-GFYTE 106 (307)
T ss_dssp TCCEEEEEEEEC----------CHHH--HHHHTCCCTTBCCEEE-EEECS--SEEEEEECCCCSCBHHHHHHTC-SCCCH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHHH--HHHHHCCCCCCCCEEE-EEEEC--CEEEEEEECCCCCCHHHHHHCC-CCCCH
T ss_conf 99899999981577312899999999--9998679989991989-99989--9888988526898488865303-67887
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEC---CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 68899999999999852103711036788623424---478724530665569899986666545654446889999611
Q 002801 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (879)
Q Consensus 82 ~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~---~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (879)
.++..|++||+.||.|||++||+||||||+||++. ..+.+|++|||+++......
T Consensus 107 ~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~---------------------- 164 (307)
T d1a06a_ 107 RDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS---------------------- 164 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEECCCCCCCEEEEECCCEEEECCCCC----------------------
T ss_conf 8999999999999875241305568704630011046888249983154358725897----------------------
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 22424301223543324787654334233356655750000135332222333321000012357988431013345620
Q 002801 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (879)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (879)
.....+||+.|
T Consensus 165 ---------------------------------------------------------------------~~~~~~GT~~y 175 (307)
T d1a06a_ 165 ---------------------------------------------------------------------VLSTACGTPGY 175 (307)
T ss_dssp -----------------------------------------------------------------------------CTT
T ss_pred ---------------------------------------------------------------------EEEEEEECCCC
T ss_conf ---------------------------------------------------------------------04400328422
Q ss_pred ECCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCC--CCHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 04413269998865860048999999625---89998155768763024579--90222039146899997049999999
Q 002801 239 ASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 239 ~aPE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
||||++.+.+|+.++|||||||+||||++ ||............+..... ++.+...++.+.+|+.+||..||.+|
T Consensus 176 ~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 255 (307)
T d1a06a_ 176 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 255 (307)
T ss_dssp SCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGS
T ss_pred CCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHC
T ss_conf 59188737999807873451599999985979999989999999986168777876666789999999999760897579
Q ss_pred CCHHHHHHCCCCCCCC
Q ss_conf 9988986152345996
Q 002801 314 PKMGELLQSEFLNEPR 329 (879)
Q Consensus 314 pt~~eil~~~~l~~~~ 329 (879)
||+.|+++||||....
T Consensus 256 ~s~~eil~hp~~~~~~ 271 (307)
T d1a06a_ 256 FTCEQALQHPWIAGDT 271 (307)
T ss_dssp CCHHHHHHSTTTTSSC
T ss_pred CCHHHHHCCHHHCCCC
T ss_conf 1899986298447997
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=300.59 Aligned_cols=228 Identities=13% Similarity=0.116 Sum_probs=173.7
Q ss_pred CCCCCCCCCCCCCC----CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHH
Q ss_conf 55423102589998----32222357344204654567898776344434457528887608853345306999987856
Q 002801 7 RGERFGVRGDDSND----FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~~~----~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~ 82 (879)
.|+.++++-..... ..|++|.. .+...+|+|++.+++ ++.++ ...|+||||++||+|.+++.+..+.+++.
T Consensus 36 ~~~~vAvK~i~~~~~~~~~~~~~E~~--il~~l~HpnIv~l~~-~~~~~--~~~~lvmEy~~~g~L~~~~~~~~~~l~e~ 110 (288)
T d2jfla1 36 TSVLAAAKVIDTKSEEELEDYMVEID--ILASCDHPNIVKLLD-AFYYE--NNLWILIEFCAGGAVDAVMLELERPLTES 110 (288)
T ss_dssp TCCEEEEEEEECSSSGGGGGTHHHHH--HHHHCCCTTBCCEEE-EEEET--TEEEEEEECCTTEEHHHHHHHHTSCCCHH
T ss_pred CCEEEEEEEECCCCHHHHHHHHHHHH--HHHHCCCCCCCEEEE-EEEEC--CEEEEEEECCCCCCHHHHHHHCCCCCCHH
T ss_conf 99399999987289999999999999--998679999884988-98009--95899996279981889998628999999
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 88999999999998521037110367886234244787245306655698999866665456544468899996112242
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
+++.|++||+.||.|||++||+||||||+|||++.++.+|++|||+++.....
T Consensus 111 ~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~--------------------------- 163 (288)
T d2jfla1 111 QIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--------------------------- 163 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHH---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCEEEEECCHHHEEECCCCCEEEEECHHHHCCCCC---------------------------
T ss_conf 99999999999999999889887140700314878999899716123035778---------------------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 43012235433247876543342333566557500001353322223333210000123579884310133456200441
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
. ......+||+.|+|||
T Consensus 164 ------------------------------------------------------~---------~~~~~~~Gt~~y~APE 180 (288)
T d2jfla1 164 ------------------------------------------------------I---------QRRDSFIGTPYWMAPE 180 (288)
T ss_dssp ------------------------------------------------------H---------HHHTCCCSCCTTCCHH
T ss_pred ------------------------------------------------------C---------CCCCCCCCCCCCCCHH
T ss_conf ------------------------------------------------------6---------4100102562647999
Q ss_pred CCC-----CCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCC-CCCHHHCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 326-----9998865860048999999625---8999815576876302457-990222039146899997049999999
Q 002801 243 ELA-----GAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGR 313 (879)
Q Consensus 243 ~~~-----~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R 313 (879)
++. +.+|+.++|||||||+||||++ ||................. ..+.+...++++.+|+.+||+.||.+|
T Consensus 181 ~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R 260 (288)
T d2jfla1 181 VVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDAR 260 (288)
T ss_dssp HHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHC
T ss_conf 98320257888880665787899999982088999998999999999707998777656699999999999766996689
Q ss_pred CCHHHHHHCCCCCCCC
Q ss_conf 9988986152345996
Q 002801 314 PKMGELLQSEFLNEPR 329 (879)
Q Consensus 314 pt~~eil~~~~l~~~~ 329 (879)
||+.|+|+||||+...
T Consensus 261 ~t~~ell~hp~~~~~~ 276 (288)
T d2jfla1 261 WTTSQLLQHPFVTVDS 276 (288)
T ss_dssp CCHHHHTTSGGGCCCC
T ss_pred CCHHHHHCCCCCCCCC
T ss_conf 1999996292318898
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=295.52 Aligned_cols=201 Identities=13% Similarity=0.169 Sum_probs=165.8
Q ss_pred EECCCCCCCCCCCCCCCCCCCC--CCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCC
Q ss_conf 4204654567898776344434--45752888760885334530699998785688999999999998521037--1103
Q 002801 31 ELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG--IVVH 106 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g--ivH~ 106 (879)
.+...+|+|++.+++ ++.+.. ....|+||||++||+|.+++++. ..+++.+++.+++||+.||+|||+++ |+||
T Consensus 61 il~~l~HpnIv~~~~-~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHr 138 (270)
T d1t4ha_ 61 MLKGLQHPNIVRFYD-SWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHR 138 (270)
T ss_dssp HHTTCCCTTBCCEEE-EEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCS
T ss_pred HHHHCCCCCEEEEEE-EEEECCCCCCEEEEEEECCCCCCHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 998579998506999-9840334588899999578989489997513-55469999999999999999999789979968
Q ss_pred CCCCCCEEEC-CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6788623424-478724530665569899986666545654446889999611224243012235433247876543342
Q 002801 107 NVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 185 (879)
Q Consensus 107 DlkP~Nill~-~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (879)
||||+|||++ ..+.+|++|||+++.....
T Consensus 139 DiKp~NILl~~~~~~~Kl~DFGla~~~~~~-------------------------------------------------- 168 (270)
T d1t4ha_ 139 DLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------------- 168 (270)
T ss_dssp CCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------------
T ss_pred CCCHHHCEEECCCCCEEEEECCCCEECCCC--------------------------------------------------
T ss_conf 767435116679998898005765423687--------------------------------------------------
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 33356655750000135332222333321000012357988431013345620044132699988658600489999996
Q 002801 186 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 265 (879)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el 265 (879)
.....+||+.|||||++.+ .|+.++|||||||+||||
T Consensus 169 ------------------------------------------~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel 205 (270)
T d1t4ha_ 169 ------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEM 205 (270)
T ss_dssp ------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCCCCCCCCCCHHHHCC-CCCCCCCHHHHHHHHHHH
T ss_conf ------------------------------------------6677553813008988478-999867110079999999
Q ss_pred HC---CCCCCHHHHHHHHHHCCCCCCCHH-HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 25---899981557687630245799022-20391468999970499999999988986152345
Q 002801 266 FC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 326 (879)
Q Consensus 266 ~~---pf~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~ 326 (879)
++ ||.........+..+.....|+.+ ...++++.+|+.+||.+||++|||+.|+|+||||+
T Consensus 206 ~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 206 ATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCC
T ss_conf 87889998765599999999738998656755789999999997637975892999996775409
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=301.78 Aligned_cols=226 Identities=16% Similarity=0.183 Sum_probs=179.2
Q ss_pred CCCCCCCCCCCCCC--CC----CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCC---CC
Q ss_conf 55542310258999--83----22223573442046545678987763444344575288876088533453069---99
Q 002801 6 LRGERFGVRGDDSN--DF----ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PK 76 (879)
Q Consensus 6 ~~~~~~~~~~~~~~--~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~---~~ 76 (879)
..|+.++++-.... .. .|.+|. ..+...+|+|++.+++ ++.++....+|+||||++||+|.+++.+ ..
T Consensus 27 ~~~~~vAvK~i~~~~~~~~~~~~~~~E~--~il~~l~HpnIv~~~~-~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~ 103 (269)
T d2java1 27 SDGKILVWKELDYGSMTEAEKQMLVSEV--NLLRELKHPNIVRYYD-RIIDRTNTTLYIVMEYCEGGDLASVITKGTKER 103 (269)
T ss_dssp TTCCEEEEEEECCTTSCHHHHHHHHHHH--HHTTSCCCTTBCCEEE-EEEC----CEEEEEECCTTEEHHHHHHHHHHHT
T ss_pred CCCCEEEEEEECHHHCCHHHHHHHHHHH--HHHHHCCCCCEEEEEE-EEEECCCCEEEEEEECCCCCCHHHHHHHCCCCC
T ss_conf 9997999999874657979999999999--9999778999824899-999178998999995689993899998515457
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCC-----CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98785688999999999998521037-----1103678862342447872453066556989998666654565444688
Q 002801 77 RSVDVYECLHIFRQIVEIVYAAHSQG-----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDL 151 (879)
Q Consensus 77 ~~~~~~~~~~i~~qi~~~l~~lHs~g-----ivH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~ 151 (879)
..+++.+++.++.||+.||.|||++| |+||||||+|||++..+.+|++|||+++.......
T Consensus 104 ~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~-------------- 169 (269)
T d2java1 104 QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS-------------- 169 (269)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCEEEEECCCEEECCCCCC--------------
T ss_conf 899999999999999999999997167788788586765425747888579800100032245777--------------
Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
Q ss_conf 99996112242430122354332478765433423335665575000013533222233332100001235798843101
Q 002801 152 SSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQIL 231 (879)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (879)
....
T Consensus 170 ----------------------------------------------------------------------------~~~~ 173 (269)
T d2java1 170 ----------------------------------------------------------------------------FAKA 173 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------------CCCC
T ss_conf ----------------------------------------------------------------------------5566
Q ss_pred CCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCC
Q ss_conf 334562004413269998865860048999999625---89998155768763024579902220391468999970499
Q 002801 232 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHP 308 (879)
Q Consensus 232 ~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (879)
.+||+.|||||++.+..|+.++|||||||+||||++ ||.... .......+.....++.+...++++.+|+.+||+.
T Consensus 174 ~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~ 252 (269)
T d2java1 174 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-QKELAGKIREGKFRRIPYRYSDELNEIITRMLNL 252 (269)
T ss_dssp --CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-HHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCS
T ss_pred CCCCCCCCCHHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf 778823279999839999938988752789999801889989989-9999999971899889743599999999997679
Q ss_pred CCCCCCCHHHHHHCCCC
Q ss_conf 99999998898615234
Q 002801 309 EPSGRPKMGELLQSEFL 325 (879)
Q Consensus 309 dP~~Rpt~~eil~~~~l 325 (879)
||.+|||+.|+++|||+
T Consensus 253 dp~~Rps~~ell~hp~i 269 (269)
T d2java1 253 KDYHRPSVEEILENPLI 269 (269)
T ss_dssp SGGGSCCHHHHHTSTTC
T ss_pred CHHHCCCHHHHHHCCCC
T ss_conf 95579189999729819
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=302.73 Aligned_cols=224 Identities=16% Similarity=0.133 Sum_probs=169.4
Q ss_pred CCCCCCCCCCCCCC-CC----CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCC
Q ss_conf 55542310258999-83----22223573442046545678987763444344575288876088533453069999878
Q 002801 6 LRGERFGVRGDDSN-DF----ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 80 (879)
Q Consensus 6 ~~~~~~~~~~~~~~-~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~ 80 (879)
..|+.++++-.... .. .+.+|.. .+...+|+|++.+++ +|.++ ...|+||||++||+|.+++.+. ..++
T Consensus 29 ~~~~~vAiK~i~~~~~~~~~~~~~~Ei~--il~~l~HpnIv~l~~-~~~~~--~~~~iVmEy~~gg~L~~~l~~~-~~l~ 102 (322)
T d1s9ja_ 29 PSGLVMARKLIHLEIKPAIRNQIIRELQ--VLHECNSPYIVGFYG-AFYSD--GEISICMEHMDGGSLDQVLKKA-GRIP 102 (322)
T ss_dssp TTTEEEEEEEEECCCCTTHHHHHHHHGG--GGGGCCCTTBCCEEE-EEECS--SEEEEEEECCTTEEHHHHHHHH-SSCC
T ss_pred CCCCEEEEEEECHHHCHHHHHHHHHHHH--HHHHCCCCCCCCEEE-EEEEC--CEEEEEEECCCCCCHHHHHHHC-CCCC
T ss_conf 9996999999875409789999999999--998679999994999-99989--9999999767998689987424-9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 568899999999999852103-7110367886234244787245306655698999866665456544468899996112
Q 002801 81 VYECLHIFRQIVEIVYAAHSQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 81 ~~~~~~i~~qi~~~l~~lHs~-givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
+.+++.+++||+.||.|||++ ||+||||||+|||++..+.+|++|||+++.....
T Consensus 103 ~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~------------------------ 158 (322)
T d1s9ja_ 103 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------ 158 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEEECCCCCCCCCC------------------------
T ss_conf 99999999999999999998599971445779946878998999548776256788------------------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 24243012235433247876543342333566557500001353322223333210000123579884310133456200
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
..+..+||++||
T Consensus 159 --------------------------------------------------------------------~~~~~~GT~~Y~ 170 (322)
T d1s9ja_ 159 --------------------------------------------------------------------MANSFVGTRSYM 170 (322)
T ss_dssp --------------------------------------------------------------------TC---CCSSCCC
T ss_pred --------------------------------------------------------------------CCCCCCCCCCCC
T ss_conf --------------------------------------------------------------------621113771411
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHH----------------------------------
Q ss_conf 4413269998865860048999999625---899981557687630----------------------------------
Q 002801 240 SPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSL---------------------------------- 282 (879)
Q Consensus 240 aPE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l---------------------------------- 282 (879)
|||++.+.+|+.++||||+||++|||++ ||.............
T Consensus 171 APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (322)
T d1s9ja_ 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAI 250 (322)
T ss_dssp CHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCH
T ss_pred CCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 94687589989488899899999999988899899887899999988751775457742123332211112223541347
Q ss_pred -------CCCCCCCHH-HCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf -------245799022-203914689999704999999999889861523459
Q 002801 283 -------RHRVLPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 283 -------~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~ 327 (879)
.....+... ...++++.+|+.+||+.||.+|||+.|+|+||||+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~ 303 (322)
T d1s9ja_ 251 FELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303 (322)
T ss_dssp HHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHCHHHCC
T ss_conf 78876650268766764448999999999986899467908999960986476
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=8.6e-42 Score=260.06 Aligned_cols=282 Identities=16% Similarity=0.233 Sum_probs=239.4
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEE
Q ss_conf 45899988999993899999999589929999548644767641134177235898138998178999699960798299
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~ 643 (879)
|.||.+.|++++|+|++.+||||+.||+|+||++.+... ......|...|.+++|+|. +.++++++.|+.+.
T Consensus 51 L~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~-------~~~~~~~~~~v~~v~~~~~-~~~l~~~~~d~~i~ 122 (340)
T d1tbga_ 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNK-------VHAIPLRSSWVMTCAYAPS-GNYVACGGLDNICS 122 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE-------EEEEECSCSCEEEEEECTT-SSEEEEEETTCCEE
T ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCEE-------EEEEECCCCCEEEEEEECC-CEEEEEECCCCEEE
T ss_conf 888789888999989999999997899555631021025-------7997246533775676012-11443101332010
Q ss_pred EEECCCC----EEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE-CCCCEEEEEEECCCCCEE
Q ss_conf 9986887----28898124787499999803999999999499949999699991488995-399669999628999799
Q 002801 644 VWDVSRS----QVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSL 718 (879)
Q Consensus 644 iwd~~t~----~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l 718 (879)
+|+.... .....+..|........... ...+..+..|.....++........... ....+.+..+.+. ..++
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 199 (340)
T d1tbga_ 123 IYNLKTREGNVRVSRELAGHTGYLSCCRFLD--DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPD-TRLF 199 (340)
T ss_dssp EEESSSSCSCCCEEEEECCCSSCEEEEEEEE--TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTT-SSEE
T ss_pred CCCCCCCCCCCCCCEECCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC-CCEE
T ss_conf 1332222122211100135421101111111--111111124454320012322111112331015763001244-2126
Q ss_pred EEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEE--ECCCCC
Q ss_conf 9996799199998579960069981578878999974-9988999976990999956999645568760797--187886
Q 002801 719 AFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF--TGHTNV 795 (879)
Q Consensus 719 ~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~--~~h~~~ 795 (879)
++|+.|+.|++||+++.+ ++..+.+|...|++++|+ ++.+|++++.|+.|++|++... ..+..+ ..+...
T Consensus 200 ~~~~~d~~v~i~d~~~~~-~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~------~~~~~~~~~~~~~~ 272 (340)
T d1tbga_ 200 VSGACDASAKLWDVREGM-CRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD------QELMTYSHDNIICG 272 (340)
T ss_dssp EEEETTTEEEEEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT------EEEEEECCTTCCSC
T ss_pred EEEECCCEEEEEECCCCC-EEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCC------CCCCCCCCCCCCCC
T ss_conf 876057369999999994-88999578898589999799899999969996999752122------11111112244574
Q ss_pred EEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEE
Q ss_conf 79999931999999992999199982599997200034799999999878789979999990799939999937984999
Q 002801 796 KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKI 875 (879)
Q Consensus 796 v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~i 875 (879)
+..++|+|++.+|++|+.||.|++|++..++++..+. +|.+.|++++|+|++. +|++|+.||.|+|
T Consensus 273 i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~-------------~H~~~V~~l~~s~d~~-~l~s~s~Dg~v~i 338 (340)
T d1tbga_ 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA-------------GHDNRVSCLGVTDDGM-AVATGSWDSFLKI 338 (340)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEEC-------------CCSSCEEEEEECTTSS-CEEEEETTSCEEE
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEC-------------CCCCCEEEEEEECCCC-EEEEECCCCEEEE
T ss_conf 5899998999999999797989999999993989984-------------8999789999908999-9999906997998
Q ss_pred EE
Q ss_conf 99
Q 002801 876 LE 877 (879)
Q Consensus 876 w~ 877 (879)
|+
T Consensus 339 Wd 340 (340)
T d1tbga_ 339 WN 340 (340)
T ss_dssp EC
T ss_pred EC
T ss_conf 59
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=292.18 Aligned_cols=203 Identities=18% Similarity=0.181 Sum_probs=166.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 42046545678987763444344575288876088533453069999878568899999999999852103711036788
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP 110 (879)
.++..+|++++.+++ ++.++ ...|+||||++||+|.+++.+. +.+++..++.+++||+.||.|+|++||+||||||
T Consensus 58 il~~l~hp~Iv~l~~-~~~~~--~~~~iv~ey~~gg~L~~~~~~~-~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP 133 (337)
T d1o6la_ 58 VLQNTRHPFLTALKY-AFQTH--DRLCFVMEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKL 133 (337)
T ss_dssp HHHSCCCTTBCCEEE-EEECS--SEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCG
T ss_pred HHHHCCCCCEEEEEE-EECCC--CCCCCCEECCCCCCHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 998679998877876-40356--4211100035798605555325-6775999999999996521134315962246477
Q ss_pred CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 62342447872453066556989998666654565444688999961122424301223543324787654334233356
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++..+.+|++|||+++.......
T Consensus 134 ~NILl~~~g~vkl~DFG~a~~~~~~~~----------------------------------------------------- 160 (337)
T d1o6la_ 134 ENLMLDKDGHIKITDFGLCKEGISDGA----------------------------------------------------- 160 (337)
T ss_dssp GGEEECTTSCEEECCCTTCBCSCCTTC-----------------------------------------------------
T ss_pred HHEEECCCCCEEEEECCCCCCCCCCCC-----------------------------------------------------
T ss_conf 784765899888820565200356786-----------------------------------------------------
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---
Q ss_conf 65575000013533222233332100001235798843101334562004413269998865860048999999625---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~--- 267 (879)
.....+||++|+|||++.+.+|+.++|||||||+||||++
T Consensus 161 -------------------------------------~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~ 203 (337)
T d1o6la_ 161 -------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203 (337)
T ss_dssp -------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred -------------------------------------CCCCCEECHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHCCC
T ss_conf -------------------------------------2055100889966665048988833310223067889987899
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHHCCCCCCCC
Q ss_conf 899981557687630245799022203914689999704999999999-----88986152345996
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eil~~~~l~~~~ 329 (879)
||................ ++.+...++++.+||.+||++||.+|++ +.++++||||....
T Consensus 204 pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~ 268 (337)
T d1o6la_ 204 PFYNQDHERLFELILMEE--IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268 (337)
T ss_dssp SSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred CCCCCCHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHCCCCCHHHCCCCCCCHHHHHCCCCCCCCC
T ss_conf 999969999999985289--98986689999999986663893442256523499997291503699
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=2.8e-43 Score=268.85 Aligned_cols=289 Identities=15% Similarity=0.168 Sum_probs=231.7
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 89998899999389999999958992999954864476764113417723589813899817899969996079829999
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 566 ~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iw 645 (879)
.+.+.+..++++|+|+.||.++ ++.|.+|++.+.... .....|...|+|++|+|. +++|++|+.||+|++|
T Consensus 15 ~~r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~~~~-------~~~~~H~~~v~~~~~sp~-g~~latg~~dg~i~iw 85 (311)
T d1nr0a1 15 TARGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDT-------EIYTEHSHQTTVAKTSPS-GYYCASGDVHGNVRIW 85 (311)
T ss_dssp CCTTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCC-------EEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCCEE-------EEECCCCCCEEEEEEECC-CCEEECCCCCCEEEEE
T ss_conf 7788759999969989999996-999999999999661-------797478888899999489-9967225567367466
Q ss_pred ECCCCEE--EEEECCCCCCEEEEEEECCCCCEEEEEECC--CCEEEEECCCCCEEEEEEC-CCCEEEEEEECCCCCEEEE
Q ss_conf 8688728--898124787499999803999999999499--9499996999914889953-9966999962899979999
Q 002801 646 DVSRSQV--LTEMREHERRVWSIDFSSADPTLLASGSDD--GSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 646 d~~t~~~--~~~~~~h~~~V~si~fsp~~~~~lasgs~D--g~V~iwD~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~t 720 (879)
|+.+.+. ...+..|..+|.+++|+| ++.++++++.+ ..+++|+..+++.+.++.. ...|.+++|+|++...+++
T Consensus 86 d~~~~~~~~~~~~~~~~~~v~~v~~s~-d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~~~~~~l~s 164 (311)
T d1nr0a1 86 DTTQTTHILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIIS 164 (311)
T ss_dssp ESSSTTCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEE
T ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
T ss_conf 310111100001343357543323331-1100011112211111111111111111111111111111112111012000
Q ss_pred EECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCC-CCCCEEEEECCCCCEEE
Q ss_conf 96799199998579960069981578878999974-99889999769909999569996455-68760797187886799
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRV-IDTPLHSFTGHTNVKNF 798 (879)
Q Consensus 721 gs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~-~~~~~~~~~~h~~~v~~ 798 (879)
|+.|+.|++||+++.+ ....+.+|...|+++.|+ +++++++++.|+.+++||........ .........+|...|++
T Consensus 165 gs~d~~i~i~d~~~~~-~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~ 243 (311)
T d1nr0a1 165 GSDDNTVAIFEGPPFK-FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFG 243 (311)
T ss_dssp EETTSCEEEEETTTBE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEE
T ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 1122111111111111-111111111111112347642212111111111000124464112221111111002465321
Q ss_pred EEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 99931999999992999199982599997200034799999999878789979999990799939999937984999991
Q 002801 799 VGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 799 v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw~l 878 (879)
++|+|++.+|++|+.|+.|++|++..++.+..+..... ....+.++.|+ +. .|++++.||.|++|++
T Consensus 244 ~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~----------~~~~~~~~~~~--~~-~l~s~s~dG~i~~wd~ 310 (311)
T d1nr0a1 244 LTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR----------IEDQQLGIIWT--KQ-ALVSISANGFINFVNP 310 (311)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS----------GGGCEEEEEEC--SS-CEEEEETTCCEEEEET
T ss_pred CCCCCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCC----------CCCEEEEEEEC--CC-EEEEEECCCEEEEEEC
T ss_conf 02478899999993799699999999969999979998----------63329999951--99-9999989997999958
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=293.77 Aligned_cols=228 Identities=18% Similarity=0.235 Sum_probs=168.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC--CCCCCEEEEEEECCCCHHHHHCCC-CCCCCHHH
Q ss_conf 554231025899983222235734420465456789877634443--445752888760885334530699-99878568
Q 002801 7 RGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYE 83 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~e~~~g~sL~~~l~~~-~~~~~~~~ 83 (879)
.|+.++++-.... ..+++|... .+...+|+|++.+++ ++.+. ....+|+|||||+||+|.++|++. ...+++.+
T Consensus 36 ~~~~vAiK~i~~~-~~~~~E~~~-~~~~~~hpnIv~l~~-~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~ 112 (335)
T d2ozaa1 36 TQEKFALKMLQDC-PKARREVEL-HWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 112 (335)
T ss_dssp TCCEEEEEEEECS-HHHHHHHHH-HHHHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHH
T ss_pred CCCEEEEEEECCC-HHHHHHHHH-HHHHCCCCCCCEEEE-EEEECCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCCHHH
T ss_conf 9989999998974-779999999-998669999782989-9950346897899999778998499999862787757999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC---CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 8999999999998521037110367886234244---7872453066556989998666654565444688999961122
Q 002801 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~---~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (879)
++.|++||+.||+|||++||+||||||+|||++. .+.+|++|||+++......
T Consensus 113 ~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~------------------------ 168 (335)
T d2ozaa1 113 ASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------------------ 168 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC------------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC------------------------
T ss_conf 99999999999999997698644410022011355556631135455123336888------------------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 42430122354332478765433423335665575000013533222233332100001235798843101334562004
Q 002801 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (879)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (879)
.....+||++|+|
T Consensus 169 -------------------------------------------------------------------~~~~~~gt~~y~a 181 (335)
T d2ozaa1 169 -------------------------------------------------------------------SLTTPCYTPYYVA 181 (335)
T ss_dssp -------------------------------------------------------------------CCCCCSCCCSSCC
T ss_pred -------------------------------------------------------------------CCCCCCCCCCCCC
T ss_conf -------------------------------------------------------------------6432267756379
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHH---HHHHHCCCC--CC-CHHHCCCHHHHHHHHHHCCCCCC
Q ss_conf 413269998865860048999999625---8999815576---876302457--99-02220391468999970499999
Q 002801 241 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR---TMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 241 PE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~---~~~~l~~~~--~~-~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
||++.+..|+.++|||||||+||||++ ||........ ....+.... +| +.+...++++.+|+.+||+.||+
T Consensus 182 PE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~ 261 (335)
T d2ozaa1 182 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPT 261 (335)
T ss_dssp CCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTT
T ss_pred CHHHCCCCCCHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHH
T ss_conf 27774898888888876451677886588998898877889999999853888889854346999999999997569965
Q ss_pred CCCCHHHHHHCCCCCCC
Q ss_conf 99998898615234599
Q 002801 312 GRPKMGELLQSEFLNEP 328 (879)
Q Consensus 312 ~Rpt~~eil~~~~l~~~ 328 (879)
+|||+.|+++||||...
T Consensus 262 ~R~s~~eil~hp~~~~~ 278 (335)
T d2ozaa1 262 QRMTITEFMNHPWIMQS 278 (335)
T ss_dssp TSCCHHHHHHSHHHHTT
T ss_pred HCCCHHHHHCCHHHHCC
T ss_conf 79099999709876178
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=0 Score=296.05 Aligned_cols=204 Identities=17% Similarity=0.151 Sum_probs=163.4
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 44204654567898776344434457528887608853345306999987856889999999999985210371103678
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~Dlk 109 (879)
-.+.+.+|+|++.+++ ++.++ ...|+||||++||+|.++|.+. ..+++.+++.|++||+.||.|||++||||||||
T Consensus 59 ~~l~~~~hpnIv~l~~-~~~~~--~~~~ivmE~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlK 134 (364)
T d1omwa3 59 SLVSTGDCPFIVCMSY-AFHTP--DKLSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 134 (364)
T ss_dssp HHHSSSCCTTBCCEEE-EEECS--SEEEEEECCCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred HHHHCCCCCCEEEEEE-EEEEC--CEEEEEEEECCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEC
T ss_conf 9985089985889999-99989--9889999914898389998732-553278999999999999999997796220444
Q ss_pred CCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86234244787245306655698999866665456544468899996112242430122354332478765433423335
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++..+.+|++|||+++.....
T Consensus 135 P~NILl~~~g~iKl~DFGla~~~~~~------------------------------------------------------ 160 (364)
T d1omwa3 135 PANILLDEHGHVRISDLGLACDFSKK------------------------------------------------------ 160 (364)
T ss_dssp GGGEEECSSSCEEECCCTTCEECSSS------------------------------------------------------
T ss_pred CCEEEECCCCCEEEEEECEEEECCCC------------------------------------------------------
T ss_conf 22167858896798220102333788------------------------------------------------------
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCC-CCCCCCCCCHHHHHHHHHHHC-
Q ss_conf 665575000013533222233332100001235798843101334562004413269-998865860048999999625-
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~s~~sDIySlGvil~el~~- 267 (879)
+....+||+.|+|||++.. ..|+.++|||||||+||||++
T Consensus 161 --------------------------------------~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG 202 (364)
T d1omwa3 161 --------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 202 (364)
T ss_dssp --------------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred --------------------------------------CCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf --------------------------------------643311345542168760389998441046778999999859
Q ss_pred --CCCCCHHHHHH-HHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHHCCCCCCCC
Q ss_conf --89998155768-7630245799022203914689999704999999999-----88986152345996
Q 002801 268 --PFSTGEEKTRT-MSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 329 (879)
Q Consensus 268 --pf~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt-----~~eil~~~~l~~~~ 329 (879)
||......... +........++.+...++.+.+||.+||+.||.+||| +.++++||||+...
T Consensus 203 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~ 272 (364)
T d1omwa3 203 HSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 272 (364)
T ss_dssp SCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCC
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHCCCCCCCCC
T ss_conf 9988889989999999860468887887789999999999856698880887435799997491023789
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=294.96 Aligned_cols=212 Identities=18% Similarity=0.224 Sum_probs=167.8
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 22235734420465456789877634443445752888760885334530699998785688999999999998521037
Q 002801 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 23 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
+.+|... +...+|+|++.+++ ++.++ ...|+||||++||+|.+++... +.+++.+++.++.||+.||.|+|++|
T Consensus 55 ~~~E~~i--l~~l~HpnIv~l~~-~~~~~--~~~~ivmEy~~gg~L~~~~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~ 128 (288)
T d1uu3a_ 55 VTRERDV--MSRLDHPFFVKLYF-TFQDD--EKLYFGLSYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLHGKG 128 (288)
T ss_dssp HHHHHHH--HHHCCSTTBCCEEE-EEECS--SEEEEEECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHH--HHHCCCCCEEEEEE-EEEEC--CEEEEEEECCCCCCHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999--98768888617999-99989--9889999704898777765315-99999999999999999997621650
Q ss_pred CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 11036788623424478724530665569899986666545654446889999611224243012235433247876543
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+||||||+|||++..+.+|++|||+++........
T Consensus 129 iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~-------------------------------------------- 164 (288)
T d1uu3a_ 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-------------------------------------------- 164 (288)
T ss_dssp EECSCCSGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred EECCCCCCCCCCCCCCCEEEECCCCCCEECCCCCCC--------------------------------------------
T ss_conf 884767741236688853886032102422567764--------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 34233356655750000135332222333321000012357988431013345620044132699988658600489999
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil 262 (879)
......+||+.|+|||++.+..|+.++|||||||+|
T Consensus 165 --------------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvil 200 (288)
T d1uu3a_ 165 --------------------------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 200 (288)
T ss_dssp -------------------------------------------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------CCCCCCCCCCCCCCCEEECCCCCCCCCCEEHHHHHH
T ss_conf --------------------------------------------333555677552584400268989666230456999
Q ss_pred HHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHH------HHHCCCCCCCCC
Q ss_conf 99625---899981557687630245799022203914689999704999999999889------861523459967
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEPRD 330 (879)
Q Consensus 263 ~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e------il~~~~l~~~~~ 330 (879)
|||++ ||................. ..+...++.+.+||.+||+.||.+|||+.| +++||||+....
T Consensus 201 yell~g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w 275 (288)
T d1uu3a_ 201 YQLVAGLPPFRAGNEYLIFQKIIKLEY--DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 275 (288)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHTTCC--CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHCCCC--CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHCCCHHHHCCCCCCCCCH
T ss_conf 998038899899599999999971899--998547999999999985579768919789737789876976478998
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.3e-41 Score=259.00 Aligned_cols=270 Identities=22% Similarity=0.326 Sum_probs=226.9
Q ss_pred ECCCCCCCEEEEEECCCEEEEEECCC-------------CCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCC
Q ss_conf 40444681689850475797872135-------------34589998899999389999999958992999954864476
Q 002801 537 INPFLEGLCKYLSFSKLRVKADLNQG-------------DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 603 (879)
Q Consensus 537 l~~~~d~~i~~w~~~~~~~~~~l~~~-------------~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~ 603 (879)
++|. |+.+++|+..+.+....+... ....|...|++++|+|++++|++|+.||.|++|+......
T Consensus 78 asg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~~dg~v~i~~~~~~~~- 155 (388)
T d1erja_ 78 ATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI- 155 (388)
T ss_dssp EEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-
T ss_pred EEEE-CCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCC-
T ss_conf 9994-99489998136405766316654432443211101467789889999889998012134441111211111111-
Q ss_pred CCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCC
Q ss_conf 76411341772358981389981789996999607982999986887288981247874999998039999999994999
Q 002801 604 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG 683 (879)
Q Consensus 604 ~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg 683 (879)
......|...|.++.|++. +..+++++.++.+++||..+.........+. ...++.+.+.++.++++|+.|+
T Consensus 156 ------~~~~~~h~~~v~~~~~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d~ 227 (388)
T d1erja_ 156 ------VMILQGHEQDIYSLDYFPS-GDKLVSGSGDRTVRIWDLRTGQCSLTLSIED-GVTTVAVSPGDGKYIAAGSLDR 227 (388)
T ss_dssp ------EEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECSS-CEEEEEECSTTCCEEEEEETTS
T ss_pred ------CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEEECCCC
T ss_conf ------1111111111111011111-1111122210156541011111100001245-4421123688787589973898
Q ss_pred CEEEEECCCCCEEEEEE--------CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCE-----------EEEEECC
Q ss_conf 49999699991488995--------3996699996289997999996799199998579960-----------0699815
Q 002801 684 SVKLWSINQGVSIGTIK--------TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI-----------PLCTLIG 744 (879)
Q Consensus 684 ~V~iwD~~~~~~i~~~~--------~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~-----------~~~~~~~ 744 (879)
.|++||..++..+..+. +...|.+++|+|+ +.+|++|+.|+.|++||+++... .......
T Consensus 228 ~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (388)
T d1erja_ 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD-GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG 306 (388)
T ss_dssp CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT-SSEEEEEETTSEEEEEEC---------------CEEEEEEC
T ss_pred EEEEEECCCCCCCEEECCCCCCCCCCCCCEEEEEECCC-CCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 19996345573000102443334577898789999799-99999997899289875157764321013444200110124
Q ss_pred CCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEE------ECCCCEEEEEECCCCE
Q ss_conf 78878999974-9988999976990999956999645568760797187886799999------3199999999299919
Q 002801 745 HNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGL------SVWDGYVATGSETNEV 817 (879)
Q Consensus 745 h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~------sp~~~~lasgs~Dg~v 817 (879)
|...|.++.|+ ++.+|++|+.|+.|++||+.++ .++.++.+|.+.|.++++ +|++.+||+||.||.|
T Consensus 307 ~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~------~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I 380 (388)
T d1erja_ 307 HKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSG------NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA 380 (388)
T ss_dssp CSSCEEEEEECGGGCEEEEEETTSEEEEEETTTC------CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCC------CEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEECCCEE
T ss_conf 5532789998899999999969897999999999------6999996889978999984674258999999999189979
Q ss_pred EEEECC
Q ss_conf 998259
Q 002801 818 FVYHKA 823 (879)
Q Consensus 818 ~iw~~~ 823 (879)
++|+++
T Consensus 381 ~iW~~~ 386 (388)
T d1erja_ 381 RIWKYK 386 (388)
T ss_dssp EEEEEE
T ss_pred EEEEEE
T ss_conf 997621
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.1e-41 Score=259.37 Aligned_cols=286 Identities=19% Similarity=0.243 Sum_probs=226.1
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEE
Q ss_conf 45899988999993899999999589929999548644767641134177235898138998178999699960798299
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 564 l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~ 643 (879)
+.||.+.|++++|+||+++||||+.|++|++||+.+...... ....|...|++++|++. + .+++++.|+.++
T Consensus 8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~------~~~~h~~~v~~v~~~~~-g-~~~~~~~d~~v~ 79 (299)
T d1nr0a2 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV------FPDVHATMITGIKTTSK-G-DLFTVSWDDHLK 79 (299)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC------SSCSCSSCEEEEEECTT-S-CEEEEETTTEEE
T ss_pred CCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEE------ECCCCCCCEEEEEEECC-C-EEECCCCEEEEE
T ss_conf 488887828999979999999990899299999999968899------83788774899884033-1-121023102688
Q ss_pred EEECCCCEE---EEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEE
Q ss_conf 998688728---89812478749999980399999999949994999969999148899539966999962899979999
Q 002801 644 VWDVSRSQV---LTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 644 iwd~~t~~~---~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~t 720 (879)
+|+...... ......+...+.++.|++ ++..+++++. +.+.+|+... .........+.+++|+|+ +.++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~g~~~~~~~~-~~i~~~~~~~---~~~~~~~~~~~~~~~s~~-~~~l~~ 153 (299)
T d1nr0a2 80 VVPAGGSGVDSSKAVANKLSSQPLGLAVSA-DGDIAVAACY-KHIAIYSHGK---LTEVPISYNSSCVALSND-KQFVAV 153 (299)
T ss_dssp EECSSSSSSCTTSCCEEECSSCEEEEEECT-TSSCEEEEES-SEEEEEETTE---EEEEECSSCEEEEEECTT-SCEEEE
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC-CCCCCCCCCC---CCCCCCCCCCCCCCCCCC-CCCCCC
T ss_conf 731677620111000111134432100112-2111112222-2221111111---111011112332211111-111111
Q ss_pred EECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEE
Q ss_conf 96799199998579960069981578878999974-99889999769909999569996455687607971878867999
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV 799 (879)
Q Consensus 721 gs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v 799 (879)
|+.|+.|++||+++.+........|...|+++.|+ ++.+|++++.|+.|++||+.+.... .....+.+|...++++
T Consensus 154 g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~---~~~~~~~~h~~~v~~l 230 (299)
T d1nr0a2 154 GGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFEL---AHTNSWTFHTAKVACV 230 (299)
T ss_dssp EETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEE---SCCCCCCCCSSCEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCC
T ss_conf 1111111111111111111111111111111111111111111111111111111111111---1111111111111111
Q ss_pred EEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 9931999999992999199982599997200034799999999878789979999990799939999937984999991
Q 002801 800 GLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 800 ~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw~l 878 (879)
+|+|++.+|++|+.|+.|++|++..+......... ..+...|++++|. ++. +|++++.||.|++|++
T Consensus 231 ~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~----------~~~~~~v~~~~~~-~~~-~l~s~s~D~~i~iWdl 297 (299)
T d1nr0a2 231 SWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKG----------AHAMSSVNSVIWL-NET-TIVSAGQDSNIKFWNV 297 (299)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCTTSCCEEETT----------SSTTSCEEEEEEE-ETT-EEEEEETTSCEEEEEC
T ss_pred CCCCCCCCEEEECCCCEEEEEECCCCCCCEEEEEC----------CCCCCCEEEEEEC-CCC-EEEEEECCCEEEEEEC
T ss_conf 24666451388828997999989999731489834----------8988968999977-989-9999928997999944
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=288.77 Aligned_cols=197 Identities=15% Similarity=0.102 Sum_probs=161.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCC----------------------CCCCHHHHHHHHHHHH
Q ss_conf 654567898776344434457528887608853345306999----------------------9878568899999999
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK----------------------RSVDVYECLHIFRQIV 92 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~----------------------~~~~~~~~~~i~~qi~ 92 (879)
.+|+|++.+++ +|.++ ...|+||||++||+|.++|+... ..+++.+++.|++||+
T Consensus 98 ~~HpnIv~l~~-~~~~~--~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~ 174 (325)
T d1rjba_ 98 GSHENIVNLLG-ACTLS--GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVA 174 (325)
T ss_dssp CCCTTBCCEEE-EECSS--SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHH
T ss_pred CCCCCEEEEEE-EEEEC--CEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 58996868778-88629--9589999727999599999862577751022100001222001257789999999999999
Q ss_pred HHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 99985210371103678862342447872453066556989998666654565444688999961122424301223543
Q 002801 93 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 172 (879)
Q Consensus 93 ~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (879)
.||.|||++|||||||||+||+++..+.+|++|||+++........
T Consensus 175 ~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~---------------------------------- 220 (325)
T d1rjba_ 175 KGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY---------------------------------- 220 (325)
T ss_dssp HHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTS----------------------------------
T ss_pred HHHHHHHHCCEEECCCCHHCCCCCCCCEEEEEECCCCCCCCCCCCE----------------------------------
T ss_conf 9999997399050527032144345982898514222204577861----------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
Q ss_conf 32478765433423335665575000013533222233332100001235798843101334562004413269998865
Q 002801 173 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 252 (879)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~ 252 (879)
.......||+.|||||++.+..|+.+
T Consensus 221 ------------------------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~ 246 (325)
T d1rjba_ 221 ------------------------------------------------------VVRGNARLPVKWMAPESLFEGIYTIK 246 (325)
T ss_dssp ------------------------------------------------------EEETTEEECGGGCCHHHHHHCCCCHH
T ss_pred ------------------------------------------------------EEECCCCCCCCCCCHHHHCCCCCCCC
T ss_conf ------------------------------------------------------56234357876578388727999963
Q ss_pred CCCHHHHHHHHHHHC----CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf 860048999999625----8999815576876302457990222039146899997049999999998898615
Q 002801 253 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 253 sDIySlGvil~el~~----pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~ 322 (879)
+|||||||+||||++ ||............+.....++.+...++.+.+|+.+||+.+|++|||+.|+++|
T Consensus 247 ~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 247 SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp HHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred EECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 30300039999998389999999898999999985699899887678999999999758896689399999999
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=0 Score=285.52 Aligned_cols=200 Identities=15% Similarity=0.134 Sum_probs=165.0
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 42046545678987763444344575288876088533453069999878568899999999999852103711036788
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP 110 (879)
.++..+|+|++.+++ ++.+ ....|+||||+.||+|.+++... ..+++..++.+++||+.||.|+|++||+||||||
T Consensus 57 il~~l~HpnIv~~~~-~~~~--~~~~~ivmE~~~gg~l~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp 132 (316)
T d1fota_ 57 MLSIVTHPFIIRMWG-TFQD--AQQIFMIMDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKP 132 (316)
T ss_dssp HHHSCCBTTBCCEEE-EEEC--SSEEEEEECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCG
T ss_pred HHHHCCCCCHHHEEE-EEEE--CCEEEEEEEECCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCC
T ss_conf 998636967533035-6852--88005676503786322343222-2111007999999998765541247677055681
Q ss_pred CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 62342447872453066556989998666654565444688999961122424301223543324787654334233356
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++..+.+|++|||+++.....
T Consensus 133 ~NILl~~~g~vkL~DFG~a~~~~~~------------------------------------------------------- 157 (316)
T d1fota_ 133 ENILLDKNGHIKITDFGFAKYVPDV------------------------------------------------------- 157 (316)
T ss_dssp GGEEECTTSCEEECCCSSCEECSSC-------------------------------------------------------
T ss_pred HHEEECCCCCEEEECCCCCEEECCC-------------------------------------------------------
T ss_conf 0503868998898317521671245-------------------------------------------------------
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---
Q ss_conf 65575000013533222233332100001235798843101334562004413269998865860048999999625---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~--- 267 (879)
....+||+.|||||++.+.+|+.++|||||||+||||++
T Consensus 158 --------------------------------------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~ 199 (316)
T d1fota_ 158 --------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 199 (316)
T ss_dssp --------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred --------------------------------------CCCCCCCCCCCCHHHHCCCCCCCHHHCCCCCHHHHHHHHCCC
T ss_conf --------------------------------------643457634359999838999804304653336899975989
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHCCCCCCCC
Q ss_conf 89998155768763024579902220391468999970499999999-----988986152345996
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eil~~~~l~~~~ 329 (879)
||............+.... +.+...++++.+++.+||..+|.+|+ ++.++++||||+...
T Consensus 200 Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~ 264 (316)
T d1fota_ 200 PFYDSNTMKTYEKILNAEL--RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 264 (316)
T ss_dssp TTCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCC
T ss_pred CCCCCCHHHHHHHHHCCCC--CCCCCCCHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHCCCCCCCCC
T ss_conf 9999699999999970898--8997789999999999954499766643102199998193514679
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=0 Score=286.03 Aligned_cols=200 Identities=12% Similarity=0.056 Sum_probs=163.8
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 42046545678987763444344575288876088533453069999878568899999999999852103711036788
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP 110 (879)
.+...+|+|++.+++ ++.+ ....|++|||+.||+|.+++.+. ..+++.+++.|++||+.||.|||++|||||||||
T Consensus 94 il~~l~hpnIv~~~~-~~~~--~~~~~~v~e~~~~g~l~~~l~~~-~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP 169 (350)
T d1rdqe_ 94 ILQAVNFPFLVKLEF-SFKD--NSNLYMVMEYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKP 169 (350)
T ss_dssp HHTTCCCTTBCCEEE-EEEC--SSEEEEEEECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred HHHHCCCCCEEECCC-CCCC--CCCCCCCCCCCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCH
T ss_conf 999748772740344-4432--22223222233466226667515-8989999999999999989999859986176799
Q ss_pred CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 62342447872453066556989998666654565444688999961122424301223543324787654334233356
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+|||++..+.+|++|||+++.....
T Consensus 170 ~NILl~~~g~ikL~DFG~a~~~~~~------------------------------------------------------- 194 (350)
T d1rdqe_ 170 ENLLIDQQGYIQVTDFGFAKRVKGR------------------------------------------------------- 194 (350)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSC-------------------------------------------------------
T ss_pred HHCCCCCCCCEEEEECEEEEECCCC-------------------------------------------------------
T ss_conf 9936077897886101033322566-------------------------------------------------------
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---
Q ss_conf 65575000013533222233332100001235798843101334562004413269998865860048999999625---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~--- 267 (879)
.....||+.|||||++.+..|+.++|||||||+||||++
T Consensus 195 --------------------------------------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~ 236 (350)
T d1rdqe_ 195 --------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 236 (350)
T ss_dssp --------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred --------------------------------------CCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC
T ss_conf --------------------------------------643367635678899717998853311450078999975889
Q ss_pred CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHCCCCCCCC
Q ss_conf 89998155768763024579902220391468999970499999999-----988986152345996
Q 002801 268 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eil~~~~l~~~~ 329 (879)
||....... .+..+.... +..+...++++.+|+.+||+.||.+|+ ++.++++||||....
T Consensus 237 Pf~~~~~~~-~~~~i~~~~-~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~ 301 (350)
T d1rdqe_ 237 PFFADQPIQ-IYEKIVSGK-VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301 (350)
T ss_dssp SSCCSSHHH-HHHHHHHCC-CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred CCCCCCHHH-HHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHCCCCCCCCC
T ss_conf 989959999-999986179-88976689999999999834099860655345499997190515899
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=288.36 Aligned_cols=204 Identities=18% Similarity=0.214 Sum_probs=164.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 42046545678987763444344575288876088533453069999878568899999999999852103711036788
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP 110 (879)
.+...+|+|++.+++ ++.++ ...|+|||||+||+|.++|... ..+++.+++.+++||+.||.|||++||+||||||
T Consensus 66 il~~l~HpnIv~~~~-~~~~~--~~~~iv~E~~~gg~L~~~i~~~-~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp 141 (293)
T d1jksa_ 66 ILKEIQHPNVITLHE-VYENK--TDVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKP 141 (293)
T ss_dssp HHHHCCCTTBCCEEE-EEECS--SEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSG
T ss_pred HHHHCCCCCCCCEEE-EEEEC--CEEEEEEECCCCCCCCCHHCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCC
T ss_conf 998679989993889-99979--9899999867786431001035-6421557899999999998766625422113330
Q ss_pred CCEEECCCC----CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 623424478----7245306655698999866665456544468899996112242430122354332478765433423
Q 002801 111 SCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 111 ~Nill~~~~----~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
+||+++..+ .+|++|||++.......
T Consensus 142 ~Nill~~~~~~~~~vkl~DfG~a~~~~~~~-------------------------------------------------- 171 (293)
T d1jksa_ 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGN-------------------------------------------------- 171 (293)
T ss_dssp GGEEESCSSSSSCCEEECCCTTCEECTTSC--------------------------------------------------
T ss_pred CEEEEECCCCCCCCEEECCHHHHHHCCCCC--------------------------------------------------
T ss_conf 127982589866646964334421057776--------------------------------------------------
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 33566557500001353322223333210000123579884310133456200441326999886586004899999962
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~ 266 (879)
......||+.|+|||++.+..|+.++|||||||+||||+
T Consensus 172 -----------------------------------------~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell 210 (293)
T d1jksa_ 172 -----------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL 210 (293)
T ss_dssp -----------------------------------------BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------CCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf -----------------------------------------312247777430999981899997665221409999997
Q ss_pred C---CCCCCHHHHHHHHHHCCCCC--CCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 5---89998155768763024579--902220391468999970499999999988986152345996
Q 002801 267 C---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 267 ~---pf~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~ 329 (879)
+ ||.................. ++.+...++.+.+|+.+||+.||.+|||+.|+|+||||+...
T Consensus 211 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~ 278 (293)
T d1jksa_ 211 SGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278 (293)
T ss_dssp HSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCC
T ss_conf 08899889999999999981688887010478899999999998638966891999996190418887
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=285.42 Aligned_cols=230 Identities=12% Similarity=0.102 Sum_probs=168.2
Q ss_pred CCCCCCCCCCCCCCC-----CC--CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCC
Q ss_conf 554231025899983-----22--22357344204654567898776344434457528887608853345306999987
Q 002801 7 RGERFGVRGDDSNDF-----EL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~-----~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~ 79 (879)
.|+.++++-...... .+ +-.++...+...+|+|++.+++ ++.++ ...|+||||+.|+++..++.. ...+
T Consensus 22 ~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~-~~~~~--~~~~ivmE~~~~~~~~~~~~~-~~~l 97 (299)
T d1ua2a_ 22 TNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLD-AFGHK--SNISLVFDFMETDLEVIIKDN-SLVL 97 (299)
T ss_dssp CCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEE-EECCT--TCCEEEEECCSEEHHHHHTTC-CSSC
T ss_pred CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE-EECCC--CCEEEHHHHHCCHHHHHHHHC-CCCC
T ss_conf 9969999998420212456799999999999998679999868985-42258--740220455345077655412-6677
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 85688999999999998521037110367886234244787245306655698999866665456544468899996112
Q 002801 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 80 ~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
++.+++.+++||+.||.|||++||+||||||+|||++..+.+|++|||+++.......
T Consensus 98 ~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~---------------------- 155 (299)
T d1ua2a_ 98 TPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR---------------------- 155 (299)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC----------------------
T ss_conf 8999999999999999886316355035776258853778411465761000578755----------------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 24243012235433247876543342333566557500001353322223333210000123579884310133456200
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
.....+||++|+
T Consensus 156 --------------------------------------------------------------------~~~~~~gt~~y~ 167 (299)
T d1ua2a_ 156 --------------------------------------------------------------------AYTHQVVTRWYR 167 (299)
T ss_dssp --------------------------------------------------------------------CCCCSCCCCTTC
T ss_pred --------------------------------------------------------------------CCCCEECCHHHC
T ss_conf --------------------------------------------------------------------433020473336
Q ss_pred CCCCCCCC-CCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCC----------------------CCC-----
Q ss_conf 44132699-98865860048999999625---899981557687630245----------------------799-----
Q 002801 240 SPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR----------------------VLP----- 288 (879)
Q Consensus 240 aPE~~~~~-~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~----------------------~~~----- 288 (879)
|||++.+. .|+.++|||||||++|||++ ||..... ...+..+... ..+
T Consensus 168 aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~-~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (299)
T d1ua2a_ 168 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH 246 (299)
T ss_dssp CHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH
T ss_pred CHHHHCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCH-HHHHHHHHHHCCCCCHHHCCCHHCCCHHHHHCCCCCCCHH
T ss_conf 399972677888056436304289999859699999999-9999999985189972545210002134430347898867
Q ss_pred CHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC
Q ss_conf 0222039146899997049999999998898615234599671
Q 002801 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 289 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~~ 331 (879)
..+...++.+.+|+.+||+.||++|||+.|+|+||||+....+
T Consensus 247 ~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~p 289 (299)
T d1ua2a_ 247 HIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP 289 (299)
T ss_dssp HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred HHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCC
T ss_conf 8565689999999999763894569089999679965789999
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=284.71 Aligned_cols=207 Identities=16% Similarity=0.166 Sum_probs=163.5
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 22223573442046545678987763444344575288876088533453069999878568899999999999852103
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.|++|.. .+.+.+|+|++.+++ +|.+ ...|+||||++||+|.++|...+..+++..++.|++||+.||+|||++
T Consensus 50 ~~~~E~~--~l~~l~HpnIv~~~~-~~~~---~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~ 123 (276)
T d1uwha_ 50 AFKNEVG--VLRKTRHVNILLFMG-YSTA---PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123 (276)
T ss_dssp HHHHHHH--HHTTCCCTTBCCEEE-EECS---SSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHH--HHHHCCCCCEEEEEE-EEEC---CEEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999--998479987864567-9715---589999965899888999852357899999999999999998887509
Q ss_pred CCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 71103678862342447872453066556989998666654565444688999961122424301223543324787654
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
|||||||||+|||++..+.+|++|||+++........
T Consensus 124 ~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~------------------------------------------- 160 (276)
T d1uwha_ 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS------------------------------------------- 160 (276)
T ss_dssp TCCCSCCCGGGEEEETTSSEEECCCCCSCC--------------------------------------------------
T ss_pred CEECCCCCHHHEEECCCCCEEECCCCCEEECCCCCCC-------------------------------------------
T ss_conf 9951614789979818997887500221333556776-------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCC---CCCCCCCCCHHH
Q ss_conf 33423335665575000013533222233332100001235798843101334562004413269---998865860048
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRL 258 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~s~~sDIySl 258 (879)
.......||+.|||||++.+ .+|+.++|||||
T Consensus 161 ---------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~ 195 (276)
T d1uwha_ 161 ---------------------------------------------HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195 (276)
T ss_dssp --------------------------------------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHH
T ss_pred ---------------------------------------------CCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHH
T ss_conf ---------------------------------------------31256655743179999950568999953151635
Q ss_pred HHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCH----HHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf 999999625---89998155768763024579902----22039146899997049999999998898615
Q 002801 259 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ----LLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 259 Gvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~ 322 (879)
||+||||++ ||............+.....++. ...+++.+.+|+.+||..+|.+|||+.+++++
T Consensus 196 Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 196 GIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 99999999788998998969999999965888986000365554999999999758897689299999999
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=6.3e-41 Score=254.92 Aligned_cols=264 Identities=17% Similarity=0.180 Sum_probs=218.9
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCC
Q ss_conf 44681689850475797872135345899988999993899999999589929999548644767641134177235898
Q 002801 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 619 (879)
Q Consensus 540 ~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~ 619 (879)
...+.+.+|+..+......+ .+|.+.|++++|+|+|++||+|+.||+|+||++...... .......|...
T Consensus 35 ~~~~~v~i~~~~~~~~~~~~-----~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~ 104 (311)
T d1nr0a1 35 CNGTSVYTVPVGSLTDTEIY-----TEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI-----LKTTIPVFSGP 104 (311)
T ss_dssp EETTEEEEEETTCSSCCEEE-----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC-----EEEEEECSSSC
T ss_pred EECCEEEEEECCCCCEEEEE-----CCCCCCEEEEEEECCCCEEECCCCCCEEEEEEEECCCCC-----CCCCCCCCCCC
T ss_conf 96999999999999661797-----478888899999489996722556736746631011110-----00013433575
Q ss_pred EEEEEEECCCCCEEEEEEC--CCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCC-EEEEEECCCCEEEEECCCCCEE
Q ss_conf 1389981789996999607--982999986887288981247874999998039999-9999949994999969999148
Q 002801 620 LSSICWNSYIKSQIASSNF--EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT-LLASGSDDGSVKLWSINQGVSI 696 (879)
Q Consensus 620 I~~i~~~~~~~~~l~s~~~--dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~-~lasgs~Dg~V~iwD~~~~~~i 696 (879)
|.+++|++. +..+++++. +..+.+|++.+++....+..|...|++++|+| ++. .+++|+.|+.|++||+++++..
T Consensus 105 v~~v~~s~d-~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~h~~~v~~v~~~~-~~~~~l~sgs~d~~i~i~d~~~~~~~ 182 (311)
T d1nr0a1 105 VKDISWDSE-SKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKP-SRPFRIISGSDDNTVAIFEGPPFKFK 182 (311)
T ss_dssp EEEEEECTT-SCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECS-SSSCEEEEEETTSCEEEEETTTBEEE
T ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 433233311-1000111122111111111111111111111111111111121-11012000112211111111111111
Q ss_pred EEEEC-CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEC-------CCCCCEEEEEEC-CCCEEEEEECCC
Q ss_conf 89953-996699996289997999996799199998579960069981-------578878999974-998899997699
Q 002801 697 GTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLI-------GHNKTVSYVKFV-DATTLVSASTDN 767 (879)
Q Consensus 697 ~~~~~-~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~-------~h~~~V~~i~fs-~~~~l~sgs~D~ 767 (879)
..+.. ...|+++.|+|+ ++++++++.|+.|++||++.... ...+. +|...|+++.|+ ++++|++|+.|+
T Consensus 183 ~~~~~~~~~i~~v~~~p~-~~~l~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg 260 (311)
T d1nr0a1 183 STFGEHTKFVHSVRYNPD-GSLFASTGGDGTIVLYNGVDGTK-TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK 260 (311)
T ss_dssp EEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTCCE-EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
T ss_conf 111111111111234764-22121111111110001244641-1222111111100246532102478899999993799
Q ss_pred CEEEEECCCCCCCCCCCCEEEEECCCC-CEEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 099995699964556876079718788-67999993199999999299919998259
Q 002801 768 TLKLWDLSMCTSRVIDTPLHSFTGHTN-VKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 768 ~i~iwd~~~~~~~~~~~~~~~~~~h~~-~v~~v~~sp~~~~lasgs~Dg~v~iw~~~ 823 (879)
.|++||++++ ++++++..|.. ....+.+.+++.+|++++.||.|++||.+
T Consensus 261 ~v~iwd~~t~------~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i~~wd~d 311 (311)
T d1nr0a1 261 TIKIWNVATL------KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311 (311)
T ss_dssp EEEEEETTTT------EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETT
T ss_pred EEEEEECCCC------CEEEEEECCCCCCCEEEEEEECCCEEEEEECCCEEEEEECC
T ss_conf 6999999999------69999979998633299999519999999899979999588
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-45 Score=282.84 Aligned_cols=204 Identities=13% Similarity=0.131 Sum_probs=166.0
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 44204654567898776344434457528887608853345306999987856889999999999985210371103678
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~Dlk 109 (879)
..++..+|+|++.+++ +|.++ ...|+||||++||+|.+++......+++.+++.|++||+.||.|||++||+|||||
T Consensus 79 ~~l~~l~HpnIv~l~g-~~~~~--~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlK 155 (299)
T d1jpaa_ 79 SIMGQFDHPNVIHLEG-VVTKS--TPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLA 155 (299)
T ss_dssp HHHTTCCCTTBCCEEE-EECSS--SSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred HHHHHCCCCCCCCEEE-EEEEC--CEEEEEEEECCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 9998579988861899-99628--87799997227985300210456799999999999999998898852798357615
Q ss_pred CCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86234244787245306655698999866665456544468899996112242430122354332478765433423335
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+|++|||+++..........
T Consensus 156 p~NILl~~~~~~Kl~DFGla~~~~~~~~~~~------------------------------------------------- 186 (299)
T d1jpaa_ 156 ARNILVNSNLVCKVSDFGLSRFLEDDTSDPT------------------------------------------------- 186 (299)
T ss_dssp GGGEEECTTCCEEECCC---------------------------------------------------------------
T ss_pred CCEEEECCCCCEEECCCCCCEECCCCCCCCE-------------------------------------------------
T ss_conf 0448988999199888443157567777653-------------------------------------------------
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC--
Q ss_conf 665575000013533222233332100001235798843101334562004413269998865860048999999625--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~-- 267 (879)
........||+.|||||.+.+..|+.++|||||||+||||++
T Consensus 187 ------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g 230 (299)
T d1jpaa_ 187 ------------------------------------YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 230 (299)
T ss_dssp ---------------------------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ------------------------------------EEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf ------------------------------------65025666883003878883699786121445357899998679
Q ss_pred --CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf --8999815576876302457990222039146899997049999999998898615
Q 002801 268 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 --pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~ 322 (879)
||.... ....+..+.....++.+...++.+.+|+.+||+.+|.+|||+.++++.
T Consensus 231 ~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 231 ERPYWDMT-NQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp CCTTTTCC-HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCCCCCCC-HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 99999999-999999997378899974226999999999758797689299999999
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=285.58 Aligned_cols=224 Identities=12% Similarity=0.112 Sum_probs=176.9
Q ss_pred CCCCCCCCCCCCCC---CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCH
Q ss_conf 55554231025899---983222235734420465456789877634443445752888760885334530699998785
Q 002801 5 LLRGERFGVRGDDS---NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 81 (879)
Q Consensus 5 ~~~~~~~~~~~~~~---~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~ 81 (879)
+..|..++|+-... ....|.+|.. .+...+|+|++.+++ +|.++ ...|+||||+++|+|.+++......+++
T Consensus 26 ~~~~~~vAvK~i~~~~~~~~~~~~E~~--~l~~l~HpnIv~~~g-~~~~~--~~~~lv~E~~~~g~L~~~l~~~~~~~~~ 100 (263)
T d1sm2a_ 26 WLNKDKVAIKTIREGAMSEEDFIEEAE--VMMKLSHPKLVQLYG-VCLEQ--APICLVFEFMEHGCLSDYLRTQRGLFAA 100 (263)
T ss_dssp ETTTEEEEEEECCSSSSCHHHHHHHHH--HHHHCCCTTBCCEEE-EECSS--SSCEEEEECCTTCBHHHHHHTTTTCCCH
T ss_pred ECCCCEEEEEEECCCCCCHHHHHHHHH--HHHHCCCCCCCCCCC-EECCC--CCEEEEEEECCCCCHHHHHHCCCCCCCH
T ss_conf 889999999998788676899999999--999668997565352-43159--9337999836999189975201347889
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 68899999999999852103711036788623424478724530665569899986666545654446889999611224
Q 002801 82 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (879)
Q Consensus 82 ~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (879)
..++.|+.||+.||+|+|+++|+||||||+||+++.++.+|++|||+++........
T Consensus 101 ~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~----------------------- 157 (263)
T d1sm2a_ 101 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT----------------------- 157 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC----------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEECCCCHHHEEECCCCCEEECCCCHHEECCCCCCE-----------------------
T ss_conf 999999999999877653164310443153266668877686553210023688733-----------------------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 24301223543324787654334233356655750000135332222333321000012357988431013345620044
Q 002801 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (879)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (879)
......||..|+||
T Consensus 158 ------------------------------------------------------------------~~~~~~gt~~y~aP 171 (263)
T d1sm2a_ 158 ------------------------------------------------------------------SSTGTKFPVKWASP 171 (263)
T ss_dssp -------------------------------------------------------------------------CTTSCCH
T ss_pred ------------------------------------------------------------------EECCEECCCCCCCH
T ss_conf ------------------------------------------------------------------50430017666785
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHH
Q ss_conf 13269998865860048999999625---899981557687630245799022203914689999704999999999889
Q 002801 242 EELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 318 (879)
Q Consensus 242 E~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e 318 (879)
|++.+..|+.++|||||||+||||++ |++...........+.....++.+...++.+.+|+.+||+.+|.+|||+.+
T Consensus 172 E~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~ 251 (263)
T d1sm2a_ 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSR 251 (263)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHH
T ss_conf 78607999840332105999999987898887789999999999806888995436799999999976579768919999
Q ss_pred HHHC
Q ss_conf 8615
Q 002801 319 LLQS 322 (879)
Q Consensus 319 il~~ 322 (879)
++++
T Consensus 252 il~~ 255 (263)
T d1sm2a_ 252 LLRQ 255 (263)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=283.42 Aligned_cols=200 Identities=19% Similarity=0.225 Sum_probs=164.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
Q ss_conf 46545678987763444344575288876088533453069999878568899999999999852103711036788623
Q 002801 34 HGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 113 (879)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Ni 113 (879)
..+|+|++.+++ ++.+ ....|+||||++||+|.++|+.. ..+++.+++.+++||+.||.|||++||+||||||+||
T Consensus 59 ~~~hp~Iv~~~~-~~~~--~~~~yivmEy~~~g~L~~~i~~~-~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~Ni 134 (320)
T d1xjda_ 59 AWEHPFLTHMFC-TFQT--KENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 134 (320)
T ss_dssp HTTCTTBCCEEE-EEEC--SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred HCCCCCEEEEEE-EECC--CCCEEEEEEECCCCCHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCE
T ss_conf 479996878988-9704--98316777503798089986404-7899999999999999999999868934034765404
Q ss_pred EECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 42447872453066556989998666654565444688999961122424301223543324787654334233356655
Q 002801 114 VMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 193 (879)
Q Consensus 114 ll~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (879)
|++..+++|++|||+++.......
T Consensus 135 L~~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------------------- 158 (320)
T d1xjda_ 135 LLDKDGHIKIADFGMCKENMLGDA-------------------------------------------------------- 158 (320)
T ss_dssp EECTTSCEEECCCTTCBCCCCTTC--------------------------------------------------------
T ss_pred EECCCCCEECCCCCHHHHCCCCCC--------------------------------------------------------
T ss_conf 444899630155530232356653--------------------------------------------------------
Q ss_pred CCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCC
Q ss_conf 75000013533222233332100001235798843101334562004413269998865860048999999625---899
Q 002801 194 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 270 (879)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~---pf~ 270 (879)
..+...||+.|+|||++.+.+|+.++|||||||++|||++ ||.
T Consensus 159 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~ 204 (320)
T d1xjda_ 159 ----------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 204 (320)
T ss_dssp ----------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ----------------------------------CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf ----------------------------------3454578777689999827998832320112278989873889999
Q ss_pred CCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHH-HHHHCCCCCCCC
Q ss_conf 98155768763024579902220391468999970499999999988-986152345996
Q 002801 271 TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEPR 329 (879)
Q Consensus 271 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~-eil~~~~l~~~~ 329 (879)
..... ..+..+... .++.+...++++.+|+.+||..+|.+||++. ++++||||+...
T Consensus 205 ~~~~~-~~~~~i~~~-~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~ 262 (320)
T d1xjda_ 205 GQDEE-ELFHSIRMD-NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 262 (320)
T ss_dssp CSSHH-HHHHHHHHC-CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred CCCHH-HHHHHHHCC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHCCCC
T ss_conf 98999-999999718-99897567999999999965448987838899998090131589
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=284.67 Aligned_cols=226 Identities=17% Similarity=0.166 Sum_probs=174.5
Q ss_pred CCCCCCCCCCCCCCC---CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHH
Q ss_conf 554231025899983---22223573442046545678987763444344575288876088533453069999878568
Q 002801 7 RGERFGVRGDDSNDF---ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYE 83 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~---~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~ 83 (879)
.|+.++++-...... .+++|.. .+...+|+|++.+++ ++.+ ....|+|||||+|++|.++|+..+..+++.+
T Consensus 29 ~~~~~AiK~i~~~~~~~~~~~~Ei~--il~~l~HpnIv~~~~-~~~~--~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~ 103 (321)
T d1tkia_ 29 SKKTYMAKFVKVKGTDQVLVKKEIS--ILNIARHRNILHLHE-SFES--MEELVMIFEFISGLDIFERINTSAFELNERE 103 (321)
T ss_dssp TTEEEEEEEECCCTHHHHHHHHHHH--HHHHSCCTTBCCEEE-EEEE--TTEEEEEECCCCCCBHHHHHTSSSCCCCHHH
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHH--HHHHCCCCCCCEEEE-EEEE--CCEEEEEEECCCCCCHHHHHHHCCCCCCHHH
T ss_conf 9969999997578665999999999--998579979890989-9988--9988999953899808899875389999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCC--CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 89999999999985210371103678862342447--8724530665569899986666545654446889999611224
Q 002801 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 161 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~--~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (879)
++.|++||+.||.|||++||+||||||+|||++.. ..+|++|||+++......
T Consensus 104 ~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~------------------------- 158 (321)
T d1tkia_ 104 IVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD------------------------- 158 (321)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC-------------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCHHHCCCCCC-------------------------
T ss_conf 9999999999999998769975135544434437885189976441110034677-------------------------
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECC
Q ss_conf 24301223543324787654334233356655750000135332222333321000012357988431013345620044
Q 002801 162 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 241 (879)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 241 (879)
......+|+.|+||
T Consensus 159 ------------------------------------------------------------------~~~~~~~t~~y~ap 172 (321)
T d1tkia_ 159 ------------------------------------------------------------------NFRLLFTAPEYYAP 172 (321)
T ss_dssp ------------------------------------------------------------------EEEEEESCGGGSCH
T ss_pred ------------------------------------------------------------------CCCCCCCCCCCCCC
T ss_conf ------------------------------------------------------------------53212233222340
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCC--CHHHCCCHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 13269998865860048999999625---899981557687630245799--0222039146899997049999999998
Q 002801 242 EELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 242 E~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
|++.+..|+.++|||||||++|||++ ||..................+ +.+...++++.+|+.+||..||.+|||+
T Consensus 173 e~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~ 252 (321)
T d1tkia_ 173 EVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTA 252 (321)
T ss_dssp HHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HHCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHCCCCHHHCCCH
T ss_conf 21048777840113027999999982899999989999999998389998802236789999999999866996689099
Q ss_pred HHHHHCCCCCCC
Q ss_conf 898615234599
Q 002801 317 GELLQSEFLNEP 328 (879)
Q Consensus 317 ~eil~~~~l~~~ 328 (879)
.|+++||||...
T Consensus 253 ~eil~hp~~~~~ 264 (321)
T d1tkia_ 253 SEALQHPWLKQK 264 (321)
T ss_dssp HHHHHSHHHHSC
T ss_pred HHHHCCHHHCCC
T ss_conf 999639965667
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.4e-45 Score=284.08 Aligned_cols=220 Identities=17% Similarity=0.107 Sum_probs=174.5
Q ss_pred CCCCCCCCCCCC---CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHC-CCCCCCCHHH
Q ss_conf 542310258999---832222357344204654567898776344434457528887608853345306-9999878568
Q 002801 8 GERFGVRGDDSN---DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYE 83 (879)
Q Consensus 8 ~~~~~~~~~~~~---~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~-~~~~~~~~~~ 83 (879)
|..++++-.... ...|++|.. .+...+|+|++.+++ +|.++ ...|++|||+++|+|.++|. .....+++..
T Consensus 42 ~~~vAvK~i~~~~~~~~~~~~E~~--il~~l~HpnIv~~~~-~~~~~--~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~ 116 (287)
T d1opja_ 42 SLTVAVKTLKEDTMEVEEFLKEAA--VMKEIKHPNLVQLLG-VCTRE--PPFYIITEFMTYGNLLDYLRECNRQEVSAVV 116 (287)
T ss_dssp TEEEEEEECCTTCSCHHHHHHHHH--HHHHCCCTTBCCEEE-EECSS--SSCEEEEECCTTCBHHHHHHHSCTTTSCHHH
T ss_pred CEEEEEEEECCCCCHHHHHHHHHH--HHHHCCCCCEECCCC-CEEEC--CEEEEEEECCCCCCHHHHHHHCCCCCHHHHH
T ss_conf 969999997776103999999999--998679998826775-27457--8547876314676067775303554157999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 89999999999985210371103678862342447872453066556989998666654565444688999961122424
Q 002801 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (879)
++.|+.||+.||.|||++||+||||||+|||++..+.+|++|||+++........
T Consensus 117 ~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~------------------------- 171 (287)
T d1opja_ 117 LLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT------------------------- 171 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE-------------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCCCE-------------------------
T ss_conf 9999999999788898789305760457689989992898324454653788722-------------------------
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 30122354332478765433423335665575000013533222233332100001235798843101334562004413
Q 002801 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (879)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (879)
..+...|+..|+|||+
T Consensus 172 ----------------------------------------------------------------~~~~~~g~~~y~aPE~ 187 (287)
T d1opja_ 172 ----------------------------------------------------------------AHAGAKFPIKWTAPES 187 (287)
T ss_dssp ----------------------------------------------------------------EETTEEECGGGCCHHH
T ss_pred ----------------------------------------------------------------EECCCCCCCCCCCHHH
T ss_conf ----------------------------------------------------------------1035566546669278
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 269998865860048999999625---89998155768763024579902220391468999970499999999988986
Q 002801 244 LAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 244 ~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil 320 (879)
+.+..|+.++|||||||+||||++ ||+...........+.....++.+...++.+.+|+.+||+.||.+|||+.+++
T Consensus 188 ~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~ 267 (287)
T d1opja_ 188 LAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIH 267 (287)
T ss_dssp HHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHH
T ss_conf 72799981043021789999998679988774259999999855888888743309999999997577976893999999
Q ss_pred H
Q ss_conf 1
Q 002801 321 Q 321 (879)
Q Consensus 321 ~ 321 (879)
+
T Consensus 268 ~ 268 (287)
T d1opja_ 268 Q 268 (287)
T ss_dssp H
T ss_pred H
T ss_conf 9
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=282.43 Aligned_cols=208 Identities=14% Similarity=0.140 Sum_probs=161.2
Q ss_pred EECCCCCCCCCCCCCCCCCC---CCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 42046545678987763444---344575288876088533453069999878568899999999999852103711036
Q 002801 31 ELTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 107 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~D 107 (879)
.++..+|+|++.+++ +|.. +.....|++||+++++.+..........+++..++.+++||+.||+|||++||+|||
T Consensus 63 ~l~~~~HpnIv~~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrD 141 (305)
T d1blxa_ 63 HLETFEHPNVVRLFD-VCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRD 141 (305)
T ss_dssp HHHHTCCTTBCCEEE-EEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHCCCCCCCEEEE-EECCCCCCCCCEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECC
T ss_conf 874258988023663-2214666667469999974058714444430378999899999999999999999758898357
Q ss_pred CCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78862342447872453066556989998666654565444688999961122424301223543324787654334233
Q 002801 108 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 187 (879)
Q Consensus 108 lkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (879)
|||+|||++..+.+|++|||+++......
T Consensus 142 iKp~NILi~~~~~~kl~dfg~~~~~~~~~--------------------------------------------------- 170 (305)
T d1blxa_ 142 LKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------------- 170 (305)
T ss_dssp CCGGGEEECTTCCEEECSCCSCCCCCGGG---------------------------------------------------
T ss_pred CCCCEEEECCCCCEEECCHHHHHHHCCCC---------------------------------------------------
T ss_conf 98627898589975421000101100234---------------------------------------------------
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 35665575000013533222233332100001235798843101334562004413269998865860048999999625
Q 002801 188 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~ 267 (879)
......||+.|+|||++.+.+|+.++|||||||++|||++
T Consensus 171 ----------------------------------------~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~ 210 (305)
T d1blxa_ 171 ----------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 210 (305)
T ss_dssp ----------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCCCCCCCHHHCCCCHHCCCCCCHHEHHHCHHHHHHHHHH
T ss_conf ----------------------------------------5777654851148310017988811100032899999987
Q ss_pred ---CCCCCHHHHHHHHHHCC---------------------C----CCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf ---89998155768763024---------------------5----7990222039146899997049999999998898
Q 002801 268 ---PFSTGEEKTRTMSSLRH---------------------R----VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~l~~---------------------~----~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (879)
||............+.. . ..+......++.+.+|+.+||++||.+|||+.|+
T Consensus 211 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~ 290 (305)
T d1blxa_ 211 RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290 (305)
T ss_dssp SSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf 87998998989999999984079961105321111033302234564544044589999999999874896679189999
Q ss_pred HHCCCCCCCCC
Q ss_conf 61523459967
Q 002801 320 LQSEFLNEPRD 330 (879)
Q Consensus 320 l~~~~l~~~~~ 330 (879)
|+||||+.+..
T Consensus 291 L~Hpff~~i~~ 301 (305)
T d1blxa_ 291 LSHPYFQDLER 301 (305)
T ss_dssp HTSGGGTTCCC
T ss_pred HCCHHHCCCHH
T ss_conf 66963407521
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=2.9e-40 Score=251.02 Aligned_cols=267 Identities=23% Similarity=0.367 Sum_probs=238.2
Q ss_pred CCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 71240444681689850475797872135345899988999993899999999589929999548644767641134177
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..+++++.|+.+++|++.+.+....+. +|.+.|.+++|+|++.++++++.++.+.+|+...... ....
T Consensus 30 ~~l~s~s~Dg~i~iWd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 97 (317)
T d1vyhc1 30 SVMVSASEDATIKVWDYETGDFERTLK-----GHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC-------IRTM 97 (317)
T ss_dssp SEEEEEESSSCEEEEETTTCCCCEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE-------EECC
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEE-----CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC-------CCCC
T ss_conf 999999389929999899997999995-----7888677776301111011111111101110011111-------1110
Q ss_pred ECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 23589813899817899969996079829999868872889812478749999980399999999949994999969999
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 614 ~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~ 693 (879)
..+...+.++.|++. ++.+++++.|+.+.+||+.+++....+..|...+.++.|++ ++.++++++.|+.|++|++.++
T Consensus 98 ~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~v~~~~~~~~ 175 (317)
T d1vyhc1 98 HGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATK 175 (317)
T ss_dssp CCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCCCCEEEECCCC-CCEEEEECCCCCEEEEECCCCEEEEEECCCCCCCEEEECCC-CCCEEEEEECCCEEEEEEECCC
T ss_conf 000000000001699-85577652675235751144303468716777630000166-7999999927982999751254
Q ss_pred CEEEEEEC-CCCEEEEEEECCC-------------------CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEE
Q ss_conf 14889953-9966999962899-------------------979999967991999985799600699815788789999
Q 002801 694 VSIGTIKT-KANVCCVQFPLDS-------------------GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVK 753 (879)
Q Consensus 694 ~~i~~~~~-~~~v~~v~~~p~~-------------------~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~ 753 (879)
..+..+.. ...+.++.|+|+. +.++++++.|+.|++||+++++ ++..+.+|...|.++.
T Consensus 176 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~~~~~~v~~~~ 254 (317)
T d1vyhc1 176 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM-CLMTLVGHDNWVRGVL 254 (317)
T ss_dssp CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE-EEEEEECCSSCEEEEE
T ss_pred EEEEEEECCCCCCEEEEEEECCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEECCCCC-EEEEEECCCCCEEEEE
T ss_conf 034788247787337998632564111034563034302588614751699789998889996-8899968899879999
Q ss_pred EC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEE
Q ss_conf 74-998899997699099995699964556876079718788679999931999999992999199982
Q 002801 754 FV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 754 fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~ 821 (879)
|+ ++.+|++++.|+.|++||+.++ +++..+.+|...|++++|+|++.+|++|+.|+.|++|+
T Consensus 255 ~~~~~~~l~s~~~dg~i~iwd~~~~------~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 255 FHSGGKFILSCADDKTLRVWDYKNK------RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp ECSSSSCEEEEETTTEEEEECCTTS------CCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred ECCCCCEEEEEECCCEEEEEECCCC------CEEEEECCCCCCEEEEEECCCCCEEEEEECCCEEEEEC
T ss_conf 8799999999979894999999999------19999928999889999949999999992899499829
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-45 Score=282.29 Aligned_cols=197 Identities=19% Similarity=0.179 Sum_probs=158.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCC---------------CCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5456789877634443445752888760885334530699---------------9987856889999999999985210
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIVYAAHS 100 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~---------------~~~~~~~~~~~i~~qi~~~l~~lHs 100 (879)
.|++++..++ ++.+ .....|++||||+||+|.++|+.. ...+++.+++.|+.||+.||.|||+
T Consensus 75 ~h~~iv~~~~-~~~~-~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~ 152 (299)
T d1ywna1 75 HHLNVVNLLG-ACTK-PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS 152 (299)
T ss_dssp CCTTBCCEEE-EECS-TTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEE-EECC-CCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 9984997411-5404-7975799998458992999998536666653222023321468999999999999999998873
Q ss_pred CCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 37110367886234244787245306655698999866665456544468899996112242430122354332478765
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 180 (879)
Q Consensus 101 ~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (879)
+|||||||||+|||++..+.+|++|||+++........
T Consensus 153 ~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~------------------------------------------ 190 (299)
T d1ywna1 153 RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY------------------------------------------ 190 (299)
T ss_dssp TTCCCSCCCGGGEEECGGGCEEECC------CCSCTTS------------------------------------------
T ss_pred CCCCCCCCCCCCEEECCCCCEEECCCCCHHHCCCCCCC------------------------------------------
T ss_conf 79717867731065779982898457520011356652------------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
Q ss_conf 43342333566557500001353322223333210000123579884310133456200441326999886586004899
Q 002801 181 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 260 (879)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGv 260 (879)
...+...||+.|+|||++.+..|+.++|||||||
T Consensus 191 ----------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv 224 (299)
T d1ywna1 191 ----------------------------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGV 224 (299)
T ss_dssp ----------------------------------------------CCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred ----------------------------------------------CCCCCEEECCCCCCHHHHHCCCCCCCCCEEEHHH
T ss_conf ----------------------------------------------2247516672102036864688996632213678
Q ss_pred HHHHHHC----CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf 9999625----8999815576876302457990222039146899997049999999998898615
Q 002801 261 LLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 261 il~el~~----pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~ 322 (879)
++|||++ ||............+..+..++.+...++++.+++.+||+.||.+|||+.|+++|
T Consensus 225 il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 225 LLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp HHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 999998688999989998999999996389888886578999999999767796679199999999
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=287.40 Aligned_cols=225 Identities=13% Similarity=0.112 Sum_probs=175.9
Q ss_pred CCCCCCCCCCCCC---CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCC-CCCCCHH
Q ss_conf 5542310258999---83222235734420465456789877634443445752888760885334530699-9987856
Q 002801 7 RGERFGVRGDDSN---DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~~---~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~-~~~~~~~ 82 (879)
.+..++|+-.... ...|.+|.. .+.+.+|+|++.+++ +|.+ ...|+||||+++|+|.+++... ...+++.
T Consensus 36 ~~~~vAvK~~~~~~~~~~~~~~E~~--~l~~l~HpnIv~~~g-~~~~---~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~ 109 (272)
T d1qpca_ 36 GHTKVAVKSLKQGSMSPDAFLAEAN--LMKQLQHQRLVRLYA-VVTQ---EPIYIITEYMENGSLVDFLKTPSGIKLTIN 109 (272)
T ss_dssp TTEEEEEEEECTTSSCHHHHHHHHH--HHHHCCCTTBCCEEE-EECS---SSCEEEEECCTTCBHHHHTTSHHHHTCCHH
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHH--HHHHCCCCCEEEEEE-EECC---CCEEEEEEECCCCCHHHHHHHCCCCCCCHH
T ss_conf 9999999998647688899999999--998679998857873-1045---976999995789828888751478988788
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 88999999999998521037110367886234244787245306655698999866665456544468899996112242
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
+++.|++||+.||.|||+++|+||||||+|||++..+.+|++|||+++........
T Consensus 110 ~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~------------------------ 165 (272)
T d1qpca_ 110 KLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT------------------------ 165 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE------------------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCCEEECCCCCCC------------------------
T ss_conf 99999999999999997489546756422515620244042341014773588644------------------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 43012235433247876543342333566557500001353322223333210000123579884310133456200441
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
..+...||..|+|||
T Consensus 166 -----------------------------------------------------------------~~~~~~gt~~y~APE 180 (272)
T d1qpca_ 166 -----------------------------------------------------------------AREGAKFPIKWTAPE 180 (272)
T ss_dssp -----------------------------------------------------------------CCTTCCCCTTTSCHH
T ss_pred -----------------------------------------------------------------CCCCCCCCCCCCCHH
T ss_conf -----------------------------------------------------------------203567744445828
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 3269998865860048999999625---8999815576876302457990222039146899997049999999998898
Q 002801 243 ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 243 ~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (879)
++.+..|+.++|||||||+||||++ |++........+..+.....++.+...++.+.+|+.+||+.+|.+|||+.++
T Consensus 181 ~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei 260 (272)
T d1qpca_ 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260 (272)
T ss_dssp HHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf 98379998245645257999999968988888889999999997068888965571999999999758897689399999
Q ss_pred HH--CCCCC
Q ss_conf 61--52345
Q 002801 320 LQ--SEFLN 326 (879)
Q Consensus 320 l~--~~~l~ 326 (879)
++ ++||.
T Consensus 261 ~~~L~~~ft 269 (272)
T d1qpca_ 261 RSVLEDFFT 269 (272)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
T ss_conf 998611321
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=284.55 Aligned_cols=205 Identities=13% Similarity=0.090 Sum_probs=165.8
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 22235734420465456789877634443445752888760885334530699998785688999999999998521037
Q 002801 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 23 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
|++|.. .+...+|+|++.+++ +|.++ .+|+||||++||+|.+++......+++.+++.|+.||+.||.|||++|
T Consensus 56 ~~~E~~--il~~l~HpnIv~l~g-~~~~~---~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~ 129 (285)
T d1u59a_ 56 MMREAQ--IMHQLDNPYIVRLIG-VCQAE---ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 129 (285)
T ss_dssp HHHHHH--HHHHCCCTTBCCEEE-EEESS---SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH--HHHHCCCCCEEEEEE-EECCC---EEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999--998679988806865-60368---079999807899689975212569999999999999999878998688
Q ss_pred CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 11036788623424478724530665569899986666545654446889999611224243012235433247876543
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+||||||+||+++..+.+|++|||+++.........
T Consensus 130 iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~------------------------------------------- 166 (285)
T d1u59a_ 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY------------------------------------------- 166 (285)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE-------------------------------------------
T ss_pred EECCCCCHHHEEECCCCCEEECCCHHHHCCCCCCCCC-------------------------------------------
T ss_conf 1057676466045468854203313421155434321-------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 34233356655750000135332222333321000012357988431013345620044132699988658600489999
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil 262 (879)
.......||+.|+|||++.+..|+.++|||||||++
T Consensus 167 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l 202 (285)
T d1u59a_ 167 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 202 (285)
T ss_dssp --------------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred --------------------------------------------CCCCCCCCCCCCCCHHHHHCCCCCCCCHHHCCHHHH
T ss_conf --------------------------------------------135621137433586887279999541232201789
Q ss_pred HHHHC----CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 99625----899981557687630245799022203914689999704999999999889861
Q 002801 263 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 263 ~el~~----pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (879)
|||++ ||.... ....+..+..+..++.+...++++.+|+.+||..+|.+||++.++++
T Consensus 203 ~E~lt~G~~Pf~~~~-~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~ 264 (285)
T d1u59a_ 203 WEALSYGQKPYKKMK-GPEVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 264 (285)
T ss_dssp HHHHTTSCCTTTTCC-THHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 999938999999979-99999999818999999767899999999975779768909999999
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.1e-44 Score=277.31 Aligned_cols=198 Identities=16% Similarity=0.169 Sum_probs=162.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
Q ss_conf 54567898776344434457528887608853345306999987856889999999999985210371103678862342
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVM 115 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill 115 (879)
.|+|++..++ ++.+ ....|+||||++||+|.++|+.. ..+++.+++.++.||+.||.|||++||+||||||+||++
T Consensus 68 ~hpnIv~~~~-~~~~--~~~~~ivmE~~~~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill 143 (277)
T d1phka_ 68 GHPNIIQLKD-TYET--NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 143 (277)
T ss_dssp TCTTBCCEEE-EEEC--SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CCCCEEEEEE-ECCC--CCCEEEEEECCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
T ss_conf 7997479976-2146--76059999768986689999865-999999999999999999999987599432346254898
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 44787245306655698999866665456544468899996112242430122354332478765433423335665575
Q 002801 116 SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGT 195 (879)
Q Consensus 116 ~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (879)
+.++.+|++|||+++..+...
T Consensus 144 ~~~~~~kl~DFG~a~~~~~~~----------------------------------------------------------- 164 (277)
T d1phka_ 144 DDDMNIKLTDFGFSCQLDPGE----------------------------------------------------------- 164 (277)
T ss_dssp CTTCCEEECCCTTCEECCTTC-----------------------------------------------------------
T ss_pred CCCCCEEECCCHHEEECCCCC-----------------------------------------------------------
T ss_conf 689983871240316726887-----------------------------------------------------------
Q ss_pred CEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCC------CCCCCCCCCHHHHHHHHHHHC--
Q ss_conf 000013533222233332100001235798843101334562004413269------998865860048999999625--
Q 002801 196 HVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~s~~sDIySlGvil~el~~-- 267 (879)
..+..+||+.|+|||.+.+ ..++.++||||+||+||||++
T Consensus 165 --------------------------------~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~ 212 (277)
T d1phka_ 165 --------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212 (277)
T ss_dssp --------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred --------------------------------CEEEEECCCCCCCHHHHHCCCCCCCCCCCCHHEECCCCHHHHHHCCCC
T ss_conf --------------------------------213452467888988860534456788992331856560231032288
Q ss_pred -CCCCCHHHHHHHHHHCCCC--CCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf -8999815576876302457--990222039146899997049999999998898615234599
Q 002801 268 -PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 328 (879)
Q Consensus 268 -pf~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~ 328 (879)
||................. ..+.+...++++.+|+.+||+++|.+||++.|+|+||||++.
T Consensus 213 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 213 PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHHHH
T ss_conf 8988999999999998189888985434689999999999765896689199999739787975
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=5.2e-40 Score=249.49 Aligned_cols=304 Identities=17% Similarity=0.262 Sum_probs=235.0
Q ss_pred CCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 71240444681689850475797872135345899988999993899999999589929999548644767641134177
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..++++..|+.+++|+..+.+....+. +|.+.|++++|+|+ .+|++|+.|++|++|+......... ...
T Consensus 24 ~~l~tgs~Dg~i~vWd~~~~~~~~~l~-----~H~~~V~~l~~s~~-~~l~s~s~D~~i~iw~~~~~~~~~~-----~~~ 92 (355)
T d1nexb2 24 NYVITGADDKMIRVYDSINKKFLLQLS-----GHDGGVWALKYAHG-GILVSGSTDRTVRVWDIKKGCCTHV-----FEG 92 (355)
T ss_dssp TEEEEEETTTEEEEEETTTTEEEEEEE-----CCSSCEEEEEEETT-TEEEEEETTCCEEEEETTTTEEEEE-----ECC
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEE-----CCCCCEEEEEECCC-CEEEEEECCCCCCCCCCCCCCCCCC-----CCC
T ss_conf 999999189909999899993999997-----89998899998699-9999996452443211111111111-----100
Q ss_pred ECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEE-----------------------ECCCCCCEEEEEEEC
Q ss_conf 235898138998178999699960798299998688728898-----------------------124787499999803
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTE-----------------------MREHERRVWSIDFSS 670 (879)
Q Consensus 614 ~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~-----------------------~~~h~~~V~si~fsp 670 (879)
..+........+.+ ++..+++++.|+.|++||+.+...... ...|...+... .+
T Consensus 93 ~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~ 169 (355)
T d1nexb2 93 HNSTVRCLDIVEYK-NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SG 169 (355)
T ss_dssp CSSCEEEEEEEEET-TEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTEEEEEECCSSCEEEE--EE
T ss_pred CCCCCCCCCCCCCC-CCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCCCCCCEEEEEEECCCCCCCC--CC
T ss_conf 11111111111112-3220455438886899985677300124652000100000112340121011002221000--02
Q ss_pred CCCCEEEEEECCCCEEEEECCCCCEEEEEEC-CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCE
Q ss_conf 9999999994999499996999914889953-996699996289997999996799199998579960069981578878
Q 002801 671 ADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTV 749 (879)
Q Consensus 671 ~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V 749 (879)
++++++++..|+.|++||+.+++.+..... ...+.++.|+|. +..+++++.|+.|++||++++. ++..+.+|...|
T Consensus 170 -~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~i~d~~~~~-~~~~~~~h~~~v 246 (355)
T d1nexb2 170 -HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHE-RKRCISASMDTTIRIWDLENGE-LMYTLQGHTALV 246 (355)
T ss_dssp -ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTCC-EEEEECCCSSCC
T ss_pred -CCCEEEEECCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCC-CEEEECCCCCCEEEEEECCCCC-CCCCCCCCCCCC
T ss_conf -5633442114420444301311000110001233211111121-0021012456368763012211-111111111111
Q ss_pred EEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEE-EEECCCCEEEEEECCCCEEEEECCCCCCC
Q ss_conf 99997499889999769909999569996455687607971878867999-99319999999929991999825999972
Q 002801 750 SYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFV-GLSVWDGYVATGSETNEVFVYHKAFPMPA 828 (879)
Q Consensus 750 ~~i~fs~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v-~~sp~~~~lasgs~Dg~v~iw~~~~~~~~ 828 (879)
+++.|+ +++|++++.|+.|++||+++. . ..+..|...+..+ .+++++.++++|+ |+.|++|++..++.+
T Consensus 247 ~~~~~~-~~~l~~~~~dg~i~iwd~~~~------~--~~~~~~~~~~~~~~~~~~~~~~l~~g~-d~~i~vwd~~tg~~~ 316 (355)
T d1nexb2 247 GLLRLS-DKFLVSAAADGSIRGWDANDY------S--RKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLV 316 (355)
T ss_dssp CEEEEC-SSEEEEECTTSEEEEEETTTC------C--EEEEEECTTCCCCCEEEECSSEEEEEE-TTEEEEEETTTCCBC
T ss_pred CCCCCC-CCEEEEEECCCCCCCCCCCCC------C--EECCCCCCCCEEEEEECCCCCEEEEEE-CCEEEEEECCCCCEE
T ss_conf 111232-100333201111111111111------1--000124688229999849998999980-997999999999798
Q ss_pred EECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 00034799999999878789979999990799939999937984999991
Q 002801 829 LSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw~l 878 (879)
.... .+|.+.|.+++|+|+ . ++++++.||.++||.+
T Consensus 317 ~~~~------------~~~~~~V~~v~~~~~-~-~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 317 HANI------------LKDADQIWSVNFKGK-T-LVAAVEKDGQSFLEIL 352 (355)
T ss_dssp CSCT------------TTTCSEEEEEEEETT-E-EEEEEESSSCEEEEEE
T ss_pred EEEE------------CCCCCCEEEEEECCC-E-EEEEEECCCCEEEEEE
T ss_conf 8884------------589998999998399-1-9999989890999999
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-45 Score=281.07 Aligned_cols=204 Identities=13% Similarity=0.084 Sum_probs=163.8
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 22235734420465456789877634443445752888760885334530699998785688999999999998521037
Q 002801 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 23 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
|.+|.. .+...+|+|++.+++ +|.++ ..|+||||+++|+|.+++++. ..+++.+++.|+.||+.||.|||++|
T Consensus 55 ~~~E~~--il~~l~HpnIv~~~g-~~~~~---~~~lvmE~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~gl~ylH~~~ 127 (277)
T d1xbba_ 55 LLAEAN--VMQQLDNPYIVRMIG-ICEAE---SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESN 127 (277)
T ss_dssp HHHHHH--HHHTCCCTTBCCEEE-EEESS---SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH--HHHHCCCCCCCEEEE-EECCC---CEEEEEECCCCCCHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999--998679989852777-75059---779999747889689997522-57899999999999999976687479
Q ss_pred CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 11036788623424478724530665569899986666545654446889999611224243012235433247876543
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+||||||+|||++..+.+|++|||+++.........
T Consensus 128 iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~------------------------------------------- 164 (277)
T d1xbba_ 128 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY------------------------------------------- 164 (277)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE-------------------------------------------
T ss_pred CCCCCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCCC-------------------------------------------
T ss_conf 5567776113102356751234134533134323443-------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 34233356655750000135332222333321000012357988431013345620044132699988658600489999
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil 262 (879)
.......||+.|+|||++.+..|+.++|||||||++
T Consensus 165 --------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l 200 (277)
T d1xbba_ 165 --------------------------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 200 (277)
T ss_dssp --------------------------------------------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------CCCCCCCCCCEECCCHHHCCCCCCCHHHHCCCHHHH
T ss_conf --------------------------------------------224456778420391665379998434430340313
Q ss_pred HHHHC----CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 99625----899981557687630245799022203914689999704999999999889861
Q 002801 263 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 263 ~el~~----pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (879)
|||++ ||.... .......+..+..++.+..+++.+.+|+.+||+.+|.+||++.+++.
T Consensus 201 ~ellt~g~~Pf~~~~-~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~ 262 (277)
T d1xbba_ 201 WEAFSYGQKPYRGMK-GSEVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262 (277)
T ss_dssp HHHHTTTCCSSTTCC-HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCC-HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 289658999999989-99999999828999998656799999999975889768909899999
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=2.5e-38 Score=239.47 Aligned_cols=267 Identities=21% Similarity=0.292 Sum_probs=228.7
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEC
Q ss_conf 24044468168985047579787213534589998899999389999999958992999954864476764113417723
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 615 (879)
+++++.||.+++|+..+.+....+. .|...|++++|+|++.++++|+.|+.+.+|+.......... ......
T Consensus 70 l~sgs~Dg~v~iWd~~~~~~~~~~~-----~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~---~~~~~~ 141 (340)
T d1tbga_ 70 LVSASQDGKLIIWDSYTTNKVHAIP-----LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRV---SRELAG 141 (340)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEE-----CSCSCEEEEEECTTSSEEEEEETTCCEEEEESSSSCSCCCE---EEEECC
T ss_pred EEEEECCCCEEEEECCCCEEEEEEE-----CCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCCCCCCCC---CEECCC
T ss_conf 9999789955563102102579972-----46533775676012114431013320101332222122211---100135
Q ss_pred CCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCE
Q ss_conf 58981389981789996999607982999986887288981247874999998039999999994999499996999914
Q 002801 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVS 695 (879)
Q Consensus 616 ~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~ 695 (879)
|.....+..+.. ...+.....+.....+.............+...+....+.+ ...++++|+.|+.|++||++++++
T Consensus 142 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~v~i~d~~~~~~ 218 (340)
T d1tbga_ 142 HTGYLSCCRFLD--DNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMC 218 (340)
T ss_dssp CSSCEEEEEEEE--TTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTTEE
T ss_pred CCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC-CCCEEEEEECCCEEEEEECCCCCE
T ss_conf 421101111111--11111112445432001232211111233101576300124-421268760573699999999948
Q ss_pred EEEEEC-CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE--CCCCCCEEEEEEC-CCCEEEEEECCCCEEE
Q ss_conf 889953-99669999628999799999679919999857996006998--1578878999974-9988999976990999
Q 002801 696 IGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTL--IGHNKTVSYVKFV-DATTLVSASTDNTLKL 771 (879)
Q Consensus 696 i~~~~~-~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~--~~h~~~V~~i~fs-~~~~l~sgs~D~~i~i 771 (879)
+.++.. ...|.+++|+|+ +.++++|+.|+.|++||++.... ...+ ..+...++++.|+ ++.+|++|+.|+.|++
T Consensus 219 ~~~~~~h~~~i~~v~~~p~-~~~l~s~s~d~~i~~~~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~i 296 (340)
T d1tbga_ 219 RQTFTGHESDINAICFFPN-GNAFATGSDDATCRLFDLRADQE-LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296 (340)
T ss_dssp EEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEE-EEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEE
T ss_pred EEEEECCCCCEEEEEECCC-CCEEEEEECCCEEEEEEECCCCC-CCCCCCCCCCCCEEEEEECCCCCEEEEEECCCEEEE
T ss_conf 8999578898589999799-89999996999699975212211-111112244574589999899999999979798999
Q ss_pred EECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEE
Q ss_conf 95699964556876079718788679999931999999992999199982
Q 002801 772 WDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 772 wd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~ 821 (879)
||+.++ .++..+.+|...|++++|+|++.+|++||.||.|++||
T Consensus 297 wd~~~~------~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 297 WDALKA------DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTTC------CEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EECCCC------CEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEEEEC
T ss_conf 999999------39899848999789999908999999990699799859
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.7e-44 Score=272.54 Aligned_cols=202 Identities=11% Similarity=0.082 Sum_probs=167.9
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 44204654567898776344434457528887608853345306999987856889999999999985210371103678
Q 002801 30 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~Dlk 109 (879)
..+.+.+|+|++.+++ +|.++ ...|++|||+.+++|.+++......+++.+++.++.||+.||.|||+++|+|||||
T Consensus 61 ~il~~l~H~nIv~~~g-~~~~~--~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlK 137 (283)
T d1mqba_ 61 GIMGQFSHHNIIRLEG-VISKY--KPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLA 137 (283)
T ss_dssp HHHHTCCCTTBCCEEE-EECSS--SSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCC
T ss_pred HHHHHCCCCCEEEEEE-EEECC--CCEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 9998568987832367-78338--80389997213574022210234542089999999999985412121234257656
Q ss_pred CCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86234244787245306655698999866665456544468899996112242430122354332478765433423335
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+|||++.++.+|++|||+++........
T Consensus 138 p~NILl~~~~~~Kl~DFGla~~~~~~~~~--------------------------------------------------- 166 (283)
T d1mqba_ 138 ARNILVNSNLVCKVSDFGLSRVLEDDPEA--------------------------------------------------- 166 (283)
T ss_dssp GGGEEECTTCCEEECCCCC-------------------------------------------------------------
T ss_pred CCEEEECCCCEEEECCCCHHHCCCCCCCC---------------------------------------------------
T ss_conf 44278889984998455103003578765---------------------------------------------------
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC--
Q ss_conf 665575000013533222233332100001235798843101334562004413269998865860048999999625--
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~-- 267 (879)
. .......||..|+|||++.+..|+.++|||||||+||||++
T Consensus 167 ----------------------------------~--~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~ 210 (283)
T d1mqba_ 167 ----------------------------------T--YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYG 210 (283)
T ss_dssp -------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred ----------------------------------C--EEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
T ss_conf ----------------------------------2--6742677773434888870499997355634489899999679
Q ss_pred -CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf -899981557687630245799022203914689999704999999999889861
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 268 -pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (879)
|++........+..+.....++.+...++.+.+|+.+||+.+|.+||++.++++
T Consensus 211 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 211 ERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp CCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 8865568999999998635789985045799999999977679768939999999
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-44 Score=275.23 Aligned_cols=198 Identities=18% Similarity=0.144 Sum_probs=163.7
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 42046545678987763444344575288876088533453069999878568899999999999852103711036788
Q 002801 31 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRP 110 (879)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP 110 (879)
.+...+|+|++.+++ +|.+ ...|+||||+.+|+|.+++......+++..++.++.||+.||.|+|++||+||||||
T Consensus 61 ~l~~l~HpnIv~l~~-~~~~---~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp 136 (273)
T d1mp8a_ 61 TMRQFDHPHIVKLIG-VITE---NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAA 136 (273)
T ss_dssp HHHTCCCTTBCCEEE-EECS---SSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred HHHHCCCCCEEEEEE-EEEC---CEEEEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCCCH
T ss_conf 998689999856988-9953---747999984069807765422478999999999999998775230226744141026
Q ss_pred CCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 62342447872453066556989998666654565444688999961122424301223543324787654334233356
Q 002801 111 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 190 (879)
Q Consensus 111 ~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (879)
+||+++..+.+|++|||+++........
T Consensus 137 ~NIll~~~~~~Kl~DfG~a~~~~~~~~~---------------------------------------------------- 164 (273)
T d1mp8a_ 137 RNVLVSSNDCVKLGDFGLSRYMEDSTYY---------------------------------------------------- 164 (273)
T ss_dssp GGEEEEETTEEEECC-----------------------------------------------------------------
T ss_pred HHEEECCCCCEEECCCHHHEECCCCCCE----------------------------------------------------
T ss_conf 5532067896787650342133677623----------------------------------------------------
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---
Q ss_conf 65575000013533222233332100001235798843101334562004413269998865860048999999625---
Q 002801 191 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--- 267 (879)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~--- 267 (879)
..+...||++|+|||++.+..|+.++|||||||+||||++
T Consensus 165 -------------------------------------~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~ 207 (273)
T d1mp8a_ 165 -------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 207 (273)
T ss_dssp -------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSC
T ss_pred -------------------------------------ECCCEECCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf -------------------------------------3054005831032667516998874524442478999982699
Q ss_pred -CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf -8999815576876302457990222039146899997049999999998898615
Q 002801 268 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 268 -pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~ 322 (879)
||.. ......+..+.....++.+...++.+.+|+.+||..+|.+|||+.+++++
T Consensus 208 ~P~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 208 KPFQG-VKNNDVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp CTTTT-CCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCC-CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 99888-99999999998189998987779999999999768797689299999999
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-44 Score=276.37 Aligned_cols=206 Identities=15% Similarity=0.093 Sum_probs=166.9
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 22235734420465456789877634443445752888760885334530699998785688999999999998521037
Q 002801 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 23 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
|.+|.. .+...+|+|++.+++ +|.++ ..++++|++.+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 58 ~~~E~~--~l~~l~HpnIv~l~g-~~~~~---~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ 131 (317)
T d1xkka_ 58 ILDEAY--VMASVDNPHVCRLLG-ICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131 (317)
T ss_dssp HHHHHH--HHHHCCCTTBCCEEE-EEESS---SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH--HHHHCCCCCEEEEEE-EEECC---CEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999--998679988815899-99619---836999842687401011133457999999999999999999998769
Q ss_pred CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 11036788623424478724530665569899986666545654446889999611224243012235433247876543
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+||||||+||+++..+.+|++|||+++........
T Consensus 132 iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-------------------------------------------- 167 (317)
T d1xkka_ 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-------------------------------------------- 167 (317)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---------------------------------------------
T ss_pred CCCCCCHHHCCEECCCCCEEEECCCCCEECCCCCCC--------------------------------------------
T ss_conf 504762120311679987586025522233544453--------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 34233356655750000135332222333321000012357988431013345620044132699988658600489999
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil 262 (879)
.......||..|+|||++.++.|+.++|||||||+|
T Consensus 168 --------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil 203 (317)
T d1xkka_ 168 --------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 203 (317)
T ss_dssp ---------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------CCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHH
T ss_conf --------------------------------------------223651058644670887469998356544079999
Q ss_pred HHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf 99625---8999815576876302457990222039146899997049999999998898615
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 263 ~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~ 322 (879)
|||++ +++...........+..+..++.+...++.+.+|+.+||..+|.+|||+.+++++
T Consensus 204 ~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 204 WELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 999977999999999899999997599899985568999999998478993469199999999
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-44 Score=276.47 Aligned_cols=229 Identities=11% Similarity=0.070 Sum_probs=179.6
Q ss_pred CCCCCCCCCCCC---CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCC-CCCCCCHH
Q ss_conf 554231025899---98322223573442046545678987763444344575288876088533453069-99987856
Q 002801 7 RGERFGVRGDDS---NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~~---~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~-~~~~~~~~ 82 (879)
.+..++++-... ....|.+|... +...+|+|++.+++ +|.+ ...|+||||+.+|+|...+.. ....+++.
T Consensus 40 ~~~~vAiK~l~~~~~~~~~~~~E~~~--l~~l~h~nIv~~~g-~~~~---~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~ 113 (285)
T d1fmka3 40 GTTRVAIKTLKPGTMSPEAFLQEAQV--MKKLRHEKLVQLYA-VVSE---EPIYIVTEYMSKGSLLDFLKGETGKYLRLP 113 (285)
T ss_dssp TTEEEEEEECCTTSSCHHHHHHHHHH--HHHCCCTTBCCEEE-EECS---SSCEEEECCCTTCBHHHHHSHHHHTTCCHH
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHH--HHHCCCCCEEEEEE-EEEC---CCEEEEEEECCCCCHHHHHHHCCCCCCHHH
T ss_conf 99999999988044888999999999--98666678868999-9823---975999994479943542000035530599
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 88999999999998521037110367886234244787245306655698999866665456544468899996112242
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
+++.|++||+.||.|||++||+||||||+|||++..+.+|++|||+++........
T Consensus 114 ~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~------------------------ 169 (285)
T d1fmka3 114 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT------------------------ 169 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCEEECCCCHHHHCCCCCCE------------------------
T ss_conf 99999999999999875411433531230799989992998442555425688733------------------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 43012235433247876543342333566557500001353322223333210000123579884310133456200441
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
..+...||+.|+|||
T Consensus 170 -----------------------------------------------------------------~~~~~~gt~~y~aPE 184 (285)
T d1fmka3 170 -----------------------------------------------------------------ARQGAKFPIKWTAPE 184 (285)
T ss_dssp -----------------------------------------------------------------------CCGGGSCHH
T ss_pred -----------------------------------------------------------------EECCCCCCCCCCCHH
T ss_conf -----------------------------------------------------------------524545566545808
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 3269998865860048999999625---8999815576876302457990222039146899997049999999998898
Q 002801 243 ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL 319 (879)
Q Consensus 243 ~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ei 319 (879)
++.+..++.++|||||||+||||++ |++........+..+.....++.....++++.+|+.+||+.+|++||++.++
T Consensus 185 ~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 264 (285)
T d1fmka3 185 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYL 264 (285)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHCCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHH
T ss_conf 98379989177413235899999868999998888999999998268999983237999999999756697589199999
Q ss_pred HH--CCCCCCCCC
Q ss_conf 61--523459967
Q 002801 320 LQ--SEFLNEPRD 330 (879)
Q Consensus 320 l~--~~~l~~~~~ 330 (879)
+. ++||.....
T Consensus 265 ~~~L~~~~~~~~p 277 (285)
T d1fmka3 265 QAFLEDYFTSTEP 277 (285)
T ss_dssp HHHHHTTTSCSCC
T ss_pred HHHHHHHHCCCCC
T ss_conf 9987666238999
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-44 Score=277.14 Aligned_cols=204 Identities=16% Similarity=0.206 Sum_probs=157.0
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECC-CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 23573442046545678987763444344575288876088-53345306999987856889999999999985210371
Q 002801 25 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 103 (879)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g-~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~gi 103 (879)
.|...+......|+|++.+++ ++.+ ....|+||||+.+ ++|.++++.. ..+++.+++.|++||+.||.|||++||
T Consensus 56 ~E~~il~~l~~~h~nIv~~~~-~~~~--~~~~~lv~e~~~~~~~l~~~~~~~-~~l~e~~~~~~~~qi~~al~~lH~~~i 131 (273)
T d1xwsa_ 56 MEVVLLKKVSSGFSGVIRLLD-WFER--PDSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCHNCGV 131 (273)
T ss_dssp HHHHHHHHHCSSSCSBCCEEE-EEEC--SSEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHCCCCCCCCEEEE-EEEE--CCEEEEEEEECCCCCHHHHHHHCC-CCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999974358988127999-9830--996899998336862289998615-899999999999999999999987797
Q ss_pred CCCCCCCCCEEECCC-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 103678862342447-8724530665569899986666545654446889999611224243012235433247876543
Q 002801 104 VVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 104 vH~DlkP~Nill~~~-~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
+||||||+|||++.+ +.+|++|||+++.....
T Consensus 132 iHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~----------------------------------------------- 164 (273)
T d1xwsa_ 132 LHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------------------------------------------- 164 (273)
T ss_dssp ECSCCSGGGEEEETTTTEEEECCCTTCEECCSS-----------------------------------------------
T ss_pred CCCCCCCCCEEEECCCCEEEECCCCCCEECCCC-----------------------------------------------
T ss_conf 556676111477447884897754653532444-----------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC-CCCCCCHHHHHH
Q ss_conf 3423335665575000013533222233332100001235798843101334562004413269998-865860048999
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 261 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-s~~sDIySlGvi 261 (879)
..+...||+.|+|||++.+..+ +.++|||||||+
T Consensus 165 ---------------------------------------------~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvi 199 (273)
T d1xwsa_ 165 ---------------------------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 199 (273)
T ss_dssp ---------------------------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHH
T ss_pred ---------------------------------------------CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEE
T ss_conf ---------------------------------------------55665658774799998489978865332554034
Q ss_pred HHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCH
Q ss_conf 999625---89998155768763024579902220391468999970499999999988986152345996714
Q 002801 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 262 l~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~~~ 332 (879)
||||++ ||..... . .+.... .....++++.+|+.+||..||.+|||+.|+++||||+....+.
T Consensus 200 lyell~g~~Pf~~~~~---i---~~~~~~--~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~~p~ 265 (273)
T d1xwsa_ 200 LYDMVCGDIPFEHDEE---I---IRGQVF--FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQ 265 (273)
T ss_dssp HHHHHHSSCSCCSHHH---H---HHCCCC--CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCHH
T ss_pred EHHHHHCCCCCCCCHH---H---HHCCCC--CCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCCC
T ss_conf 5367568899887367---7---615447--7877999999999997608975893999985398667887888
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-44 Score=274.53 Aligned_cols=230 Identities=16% Similarity=0.176 Sum_probs=164.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC----CCCCCCEEEEEEECCCCHHHHH--CCCCCCCC
Q ss_conf 55423102589998322223573442046545678987763444----3445752888760885334530--69999878
Q 002801 7 RGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWL--DKPKRSVD 80 (879)
Q Consensus 7 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~e~~~g~sL~~~l--~~~~~~~~ 80 (879)
.|+.++++-.......+++|.. .+.+.+|+|++..+. ++.. +.....|+||||++++.+..+. ......++
T Consensus 44 ~~~~vAiK~i~~~~~~~~~Ei~--il~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~ 120 (350)
T d1q5ka_ 44 SGELVAIKKVLQDKRFKNRELQ--IMRKLDHCNIVRLRY-FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLP 120 (350)
T ss_dssp TCCEEEEEEEECCSSSCCHHHH--HHHHCCCTTBCCEEE-EEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCC
T ss_pred CCCEEEEEEECCCCHHHHHHHH--HHHHCCCCCCCCEEE-EEEECCCCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 9979999998816068999999--998668989873878-9974476577318999984168860788886310368999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC-CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 568899999999999852103711036788623424478-7245306655698999866665456544468899996112
Q 002801 81 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 81 ~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~-~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
+.+++.|++||+.||+|||++||+||||||+|||++..+ .+|++|||++.......
T Consensus 121 ~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~----------------------- 177 (350)
T d1q5ka_ 121 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------------- 177 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS-----------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEECCCCHHHCCCCC-----------------------
T ss_conf 999999999999999999866876457886037873589711673366054404776-----------------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 24243012235433247876543342333566557500001353322223333210000123579884310133456200
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
.....+||..|+
T Consensus 178 --------------------------------------------------------------------~~~~~~gt~~y~ 189 (350)
T d1q5ka_ 178 --------------------------------------------------------------------PNVSYICSRYYR 189 (350)
T ss_dssp --------------------------------------------------------------------CCCSCCSCTTSC
T ss_pred --------------------------------------------------------------------CCCCCCCCCCCC
T ss_conf --------------------------------------------------------------------532002555556
Q ss_pred CCCCCCCC-CCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCC------------------CCCC---------
Q ss_conf 44132699-98865860048999999625---89998155768763024------------------5799---------
Q 002801 240 SPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLP--------- 288 (879)
Q Consensus 240 aPE~~~~~-~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~------------------~~~~--------- 288 (879)
|||++.+. .|+.++||||+||++|||++ ||............+.. ..++
T Consensus 190 aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (350)
T d1q5ka_ 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269 (350)
T ss_dssp CHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGG
T ss_pred CHHHHHCCCCCCCCEEECCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCCCCCCCHHH
T ss_conf 82776404688821000246527785502879989879999999999974898177654306210110355445674444
Q ss_pred CHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 022203914689999704999999999889861523459967
Q 002801 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 289 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~ 330 (879)
......++.+.+|+.+||..||.+|||+.|+|+||||+....
T Consensus 270 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 270 VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp TSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGC
T ss_pred HCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 315689999999999976589557929999966984524667
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.7e-43 Score=270.11 Aligned_cols=226 Identities=14% Similarity=0.207 Sum_probs=166.3
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCCCEEECC-CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHH
Q ss_conf 5542310258999-832222357344204-65456789877634443445752888760885334530699998785688
Q 002801 7 RGERFGVRGDDSN-DFELRKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC 84 (879)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~ 84 (879)
.|+.++++-.... ...+++|.+. +.. ..|+|++.++. ++.++....+|+||||+.+++|.++. +.+++.++
T Consensus 59 ~~~~vAiK~i~~~~~~~~~~Ei~i--l~~l~~hpnIv~~~~-~~~~~~~~~~~~v~e~~~~~~L~~~~----~~l~e~~i 131 (328)
T d3bqca1 59 NNEKVVVKILKPVKKKKIKREIKI--LENLRGGPNIITLAD-IVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDI 131 (328)
T ss_dssp TTEEEEEEEECSSCHHHHHHHHHH--HHHHTTSTTBCCEEE-EEECTTTCSEEEEEECCCSCBGGGTT----TSCCHHHH
T ss_pred CCCEEEEEEECHHHHHHHHHHHHH--HHHCCCCCCCCEEEE-EEEECCCCCEEEEEEECCCCCHHHHH----CCCCHHHH
T ss_conf 997999999888999999999999--985157998767999-99816877126888631798589974----68999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCC-CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 99999999999852103711036788623424478-72453066556989998666654565444688999961122424
Q 002801 85 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (879)
Q Consensus 85 ~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~-~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (879)
+.+++||+.||+|||++||+||||||+|||++..+ .+|++|||+++......
T Consensus 132 ~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~--------------------------- 184 (328)
T d3bqca1 132 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--------------------------- 184 (328)
T ss_dssp HHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC---------------------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCCEECCCCC---------------------------
T ss_conf 99999999999887643344345644123774899836641565426646887---------------------------
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 30122354332478765433423335665575000013533222233332100001235798843101334562004413
Q 002801 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (879)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (879)
.....++|..|+|||.
T Consensus 185 ----------------------------------------------------------------~~~~~~~t~~y~aPE~ 200 (328)
T d3bqca1 185 ----------------------------------------------------------------EYNVRVASRYFKGPEL 200 (328)
T ss_dssp ----------------------------------------------------------------CCCSCCSCGGGCCHHH
T ss_pred ----------------------------------------------------------------CCCCCCCCCCCCCCCC
T ss_conf ----------------------------------------------------------------4443224864247610
Q ss_pred CCCCC-CCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHC------------------------------------
Q ss_conf 26999-8865860048999999625---8999815576876302------------------------------------
Q 002801 244 LAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR------------------------------------ 283 (879)
Q Consensus 244 ~~~~~-~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~------------------------------------ 283 (879)
+.+.. |+.++||||+||++|||++ ||............+.
T Consensus 201 ~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (328)
T d3bqca1 201 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE 280 (328)
T ss_dssp HTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGG
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHCCCCCCCCHH
T ss_conf 26888888452323354555876048899988760189999999987884155555422544474300000333433112
Q ss_pred CCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 45799022203914689999704999999999889861523459967
Q 002801 284 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 284 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~ 330 (879)
.....+.....++++.+|+.+||+.||.+|||+.|+|+||||+....
T Consensus 281 ~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~ 327 (328)
T d3bqca1 281 RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 327 (328)
T ss_dssp GGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred HCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCCC
T ss_conf 11552112448999999999986699568908999964935588797
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-43 Score=270.86 Aligned_cols=236 Identities=14% Similarity=0.117 Sum_probs=168.3
Q ss_pred CCCCCCCCCCCCCC-CC----CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC--CCCEEEEEEECCCCHHHHHCCCCCC
Q ss_conf 55542310258999-83----22223573442046545678987763444344--5752888760885334530699998
Q 002801 6 LRGERFGVRGDDSN-DF----ELRKHSDGVELTHGDHLRNQGGLSGVCENEAA--IDPFVHAIEWGDVSLRQWLDKPKRS 78 (879)
Q Consensus 6 ~~~~~~~~~~~~~~-~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~e~~~g~sL~~~l~~~~~~ 78 (879)
..|+.++++-.... .. .+.+| ...+...+|++++.+++ ++..+.. ...+++++|+.|++|.++++.. .
T Consensus 31 ~~~~~vAvK~i~~~~~~~~~~~~~~E--i~il~~l~hp~iv~~~~-~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~--~ 105 (345)
T d1pmea_ 31 VNKVRVAIKKISPFEHQTYCQRTLRE--IKILLRFRHENIIGIND-IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--H 105 (345)
T ss_dssp TTCSEEEEEEECCTTCHHHHHHHHHH--HHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCCEEHHHHHHHC--C
T ss_pred CCCCEEEEEEEEHHCCHHHHHHHHHH--HHHHHHCCCCCCCCEEE-EEEECCCCCCCEEEEEEEECCCCHHHHHHCC--C
T ss_conf 99949999998031095899999999--99999768989885888-9950564554149999962598656644058--9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 78568899999999999852103711036788623424478724530665569899986666545654446889999611
Q 002801 79 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 158 (879)
Q Consensus 79 ~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (879)
+++.+++.+++||+.||+|||++|||||||||+|||++..+.+|++|||++.........
T Consensus 106 l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~-------------------- 165 (345)
T d1pmea_ 106 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH-------------------- 165 (345)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB--------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEECCCCCEEECCCCCCC--------------------
T ss_conf 999999999999999999999789867778764378879997787545705650477764--------------------
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 22424301223543324787654334233356655750000135332222333321000012357988431013345620
Q 002801 159 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 238 (879)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 238 (879)
.......+||+.|
T Consensus 166 -------------------------------------------------------------------~~~~~~~~gt~~y 178 (345)
T d1pmea_ 166 -------------------------------------------------------------------TGFLTEYVATRWY 178 (345)
T ss_dssp -------------------------------------------------------------------CCTTCCCCSCGGG
T ss_pred -------------------------------------------------------------------CEEECCCCCCCEE
T ss_conf -------------------------------------------------------------------1010110265200
Q ss_pred ECCCCCCC-CCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCC--------------------------CCC
Q ss_conf 04413269-998865860048999999625---899981557687630245--------------------------799
Q 002801 239 ASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--------------------------VLP 288 (879)
Q Consensus 239 ~aPE~~~~-~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~--------------------------~~~ 288 (879)
+|||++.. ..|+.++||||+||++|||++ ||................ ...
T Consensus 179 ~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (345)
T d1pmea_ 179 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 258 (345)
T ss_dssp CCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCC
T ss_pred CHHHHHHCCCCCCCHHHHHCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 03878604788874101004670133776697997888889999987652069975664234332222024467755778
Q ss_pred ---CHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHH
Q ss_conf ---022203914689999704999999999889861523459967147
Q 002801 289 ---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 289 ---~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~~~~ 333 (879)
..+...++++.+|+.+||+.||.+|||+.|+|+||||+....+..
T Consensus 259 ~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~~~ 306 (345)
T d1pmea_ 259 PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSD 306 (345)
T ss_dssp CHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred CHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCCCC
T ss_conf 777837899999999999976489567908999861986555889765
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-43 Score=266.69 Aligned_cols=231 Identities=15% Similarity=0.211 Sum_probs=168.9
Q ss_pred CCCCCCCCCCCCCC--CCCC--CCCCCCEEECCCCCCCCCCCCCCCCCCCC----CCCCEEEEEEECCCCHHHHHCCCCC
Q ss_conf 55542310258999--8322--22357344204654567898776344434----4575288876088533453069999
Q 002801 6 LRGERFGVRGDDSN--DFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKR 77 (879)
Q Consensus 6 ~~~~~~~~~~~~~~--~~~~--r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~e~~~g~sL~~~l~~~~~ 77 (879)
..|+.++++-.... .... +-.++.-.+...+|+|++.+++ +|.++. ....|+||||+ |.+|..+++. .
T Consensus 41 ~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~-~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~--~ 116 (346)
T d1cm8a_ 41 RTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH--E 116 (346)
T ss_dssp TTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECC-SEEHHHHHHH--C
T ss_pred CCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEE-EECCCCCCCCCCEEEEEEECC-CCCHHHHHHH--C
T ss_conf 99989999998522259699999999999998668987547999-863576555541599998405-5218999874--0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87856889999999999985210371103678862342447872453066556989998666654565444688999961
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 78 ~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
.+++..++.+++||+.||.|||++||+||||||+|||++..+.+|++|||+++.....
T Consensus 117 ~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~---------------------- 174 (346)
T d1cm8a_ 117 KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE---------------------- 174 (346)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS----------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCEECCCCC----------------------
T ss_conf 2269999999999999999987378764566851111210012211343102206876----------------------
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12242430122354332478765433423335665575000013533222233332100001235798843101334562
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
.+...||++
T Consensus 175 -----------------------------------------------------------------------~~~~~~t~~ 183 (346)
T d1cm8a_ 175 -----------------------------------------------------------------------MTGYVVTRW 183 (346)
T ss_dssp -----------------------------------------------------------------------CCSSCSCGG
T ss_pred -----------------------------------------------------------------------CCCCCCCCC
T ss_conf -----------------------------------------------------------------------310245533
Q ss_pred EECCCCCCCC-CCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCC-----------------------------
Q ss_conf 0044132699-98865860048999999625---89998155768763024-----------------------------
Q 002801 238 YASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH----------------------------- 284 (879)
Q Consensus 238 Y~aPE~~~~~-~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~----------------------------- 284 (879)
|+|||++.+. .++.++||||+||++|||++ ||...............
T Consensus 184 y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (346)
T d1cm8a_ 184 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEK 263 (346)
T ss_dssp GCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCC
T ss_pred CCCHHHHCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHCCCCCCCC
T ss_conf 35889981787899650103003899999978699888976899999985037884888865300034433115786665
Q ss_pred CCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCHH
Q ss_conf 5799022203914689999704999999999889861523459967147
Q 002801 285 RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 333 (879)
Q Consensus 285 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~~~~ 333 (879)
......+...++.+.+|+.+||+.||.+|||+.|+|+||||+.......
T Consensus 264 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~~~~~ 312 (346)
T d1cm8a_ 264 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTED 312 (346)
T ss_dssp CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC----
T ss_pred CCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCCCC
T ss_conf 5667755689999999999977299557929999963962375877664
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-43 Score=267.78 Aligned_cols=232 Identities=16% Similarity=0.164 Sum_probs=168.5
Q ss_pred CCCCCCCCCCCCCC------CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCC
Q ss_conf 55542310258999------832222357344204654567898776344434457528887608853345306999987
Q 002801 6 LRGERFGVRGDDSN------DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (879)
Q Consensus 6 ~~~~~~~~~~~~~~------~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~ 79 (879)
..|+.++++-.... ...+.+ +.-.+...+|+|++.+++ ++.+ ....|+||||+.++.+..........+
T Consensus 25 ~~~~~vAvK~i~~~~~~~~~~~~~~~--Ei~il~~l~Hp~Iv~~~~-~~~~--~~~~~iv~e~~~~~~~~~~~~~~~~~l 99 (298)
T d1gz8a_ 25 LTGEVVALKKIRLDTETEGVPSTAIR--EISLLKELNHPNIVKLLD-VIHT--ENKLYLVFEFLHQDLKKFMDASALTGI 99 (298)
T ss_dssp TTCCEEEEEEEC-------CCHHHHH--HHHHHTTCCCTTBCCEEE-EEEE--TTEEEEEEECCSEEHHHHHHHTTTTCC
T ss_pred CCCCEEEEEEEEHHHCCHHHHHHHHH--HHHHHHHCCCCCEEEECC-CCCC--CCCEEEEEEECCCCHHHHHHHHCCCCC
T ss_conf 99979999998022257589999999--999998679983887445-3322--432037886237744555442025688
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 85688999999999998521037110367886234244787245306655698999866665456544468899996112
Q 002801 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 80 ~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
++.+++.+++||+.||.|||++|||||||||+|||++.++.+|++|||.++....+..
T Consensus 100 ~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~---------------------- 157 (298)
T d1gz8a_ 100 PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR---------------------- 157 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSB----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCEECCCCCCHHEEECCCCCCEECCCCCCEECCCCCC----------------------
T ss_conf 8899999999999999986528899213571140113467621035786134368864----------------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 24243012235433247876543342333566557500001353322223333210000123579884310133456200
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
......||+.|+
T Consensus 158 --------------------------------------------------------------------~~~~~~gt~~y~ 169 (298)
T d1gz8a_ 158 --------------------------------------------------------------------TYTHEVVTLWYR 169 (298)
T ss_dssp --------------------------------------------------------------------CTTCCBCCCTTC
T ss_pred --------------------------------------------------------------------CCEEECCCCEEE
T ss_conf --------------------------------------------------------------------100103652154
Q ss_pred CCCCCCCCC-CCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCC------C-------------C--------C
Q ss_conf 441326999-8865860048999999625---899981557687630245------7-------------9--------9
Q 002801 240 SPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR------V-------------L--------P 288 (879)
Q Consensus 240 aPE~~~~~~-~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~------~-------------~--------~ 288 (879)
|||++.... ++.++|||||||++|||++ ||................ . . .
T Consensus 170 apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (298)
T d1gz8a_ 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS 249 (298)
T ss_dssp CHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHH
T ss_pred EHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 11221366577742210333313427966879989889999999999832898333144422242124345432222044
Q ss_pred CHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCH
Q ss_conf 02220391468999970499999999988986152345996714
Q 002801 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 289 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~~~ 332 (879)
......++.+.+|+.+||+.||.+|||+.|+|+||||+....+.
T Consensus 250 ~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p~ 293 (298)
T d1gz8a_ 250 KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293 (298)
T ss_dssp HHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred HHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCCC
T ss_conf 41667899999999997639955791899996787014699999
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-43 Score=269.86 Aligned_cols=211 Identities=16% Similarity=0.104 Sum_probs=170.1
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 22223573442046545678987763444344575288876088533453069999878568899999999999852103
Q 002801 22 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 22 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.|++|.+. ++..+|+|++.+++ +|.+. ....|+||||+++++|.+++......+++..++.++.|++.||.|+|+.
T Consensus 74 ~~~~E~~~--l~~l~HpnIv~~~g-~~~~~-~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~ 149 (311)
T d1r0pa_ 74 QFLTEGII--MKDFSHPNVLSLLG-ICLRS-EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK 149 (311)
T ss_dssp HHHHHHHH--HHTCCCTTBCCCCE-EEEET-TTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHH--HHHCCCCCEEEEEE-EEEEC-CCCEEEEEEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999999--98678999867867-89806-9943899987406741442101345404899999999988765200336
Q ss_pred CCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 71103678862342447872453066556989998666654565444688999961122424301223543324787654
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 181 (879)
Q Consensus 102 givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (879)
+|+||||||+|||++..+.+|++|||+++..........
T Consensus 150 ~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~----------------------------------------- 188 (311)
T d1r0pa_ 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----------------------------------------- 188 (311)
T ss_dssp TCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCT-----------------------------------------
T ss_pred CCCCCCCCHHHEEECCCCCEEEECCCCHHHCCCCCCCCC-----------------------------------------
T ss_conf 762577668757677999889910652322556655531-----------------------------------------
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 33423335665575000013533222233332100001235798843101334562004413269998865860048999
Q 002801 182 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 261 (879)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvi 261 (879)
.......||+.|+|||++.+..++.++||||||++
T Consensus 189 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGiv 223 (311)
T d1r0pa_ 189 ---------------------------------------------HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL 223 (311)
T ss_dssp ---------------------------------------------TCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ---------------------------------------------EECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH
T ss_conf ---------------------------------------------00256555645567688743799974574661999
Q ss_pred HHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf 999625---8999815576876302457990222039146899997049999999998898615
Q 002801 262 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 262 l~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~ 322 (879)
||||++ ||............+..+..++.+...++.+.+|+.+||+.||.+||++.|++++
T Consensus 224 l~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 224 LWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 9999978999988899999999998089889964475999999999768897689399999999
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-38 Score=237.21 Aligned_cols=302 Identities=18% Similarity=0.266 Sum_probs=238.5
Q ss_pred CEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 12404446816898504757978721353458999889999938999999995899299995486447676411341772
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 535 ~~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
.+++++.|+.+++|+..+.++...+. +|.+.|.+++|+++ +|++|+.|+.+++|+....... ....
T Consensus 29 ~l~sgs~Dg~i~vWd~~~~~~~~~~~-----~h~~~V~~v~~~~~--~l~s~s~D~~~~~~~~~~~~~~-------~~~~ 94 (342)
T d2ovrb2 29 RIVSGSDDNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMRDN--IIISGSTDRTLKVWNAETGECI-------HTLY 94 (342)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECC-----CCSSCEEEEEEETT--EEEEEETTSCEEEEETTTTEEE-------EEEC
T ss_pred EEEEEECCCEEEEEECCCCCEEEEEE-----CCCCCEEEEEECCC--CCCCCEECCCCCCCCCCCCCCE-------ECCC
T ss_conf 99999189909999899997999994-----88999899994798--6321000001111111100000-------0012
Q ss_pred CCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCC
Q ss_conf 35898138998178999699960798299998688728898124787499999803999999999499949999699991
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV 694 (879)
Q Consensus 615 ~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~ 694 (879)
.....+...... ...+..+..|+.+.+|+..+++....+..+....... .+ ....+++++.|+.|++||.....
T Consensus 95 ~~~~~~~~~~~~---~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~d~~i~~~d~~~~~ 168 (342)
T d2ovrb2 95 GHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QY-DGRRVVSGAYDFMVKVWDPETET 168 (342)
T ss_dssp CCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEE--EE-CSSCEEEEETTSCEEEEEGGGTE
T ss_pred CCCEEEEEEECC---CCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEE--CC-CCCEEEEECCCCEEEEEECCCCE
T ss_conf 333047652024---6522123444037874035563001110011110000--01-33302433589869995252343
Q ss_pred EEEEEECCC-CEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEE
Q ss_conf 488995399-6699996289997999996799199998579960069981578878999974998899997699099995
Q 002801 695 SIGTIKTKA-NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWD 773 (879)
Q Consensus 695 ~i~~~~~~~-~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs~~~~l~sgs~D~~i~iwd 773 (879)
.+..+..+. .+.++ .++ +.++++|+.|+.|++||++..+ ++..+.+|...+.++.++ +++|++++.|+.|++||
T Consensus 169 ~~~~~~~~~~~~~~~--~~~-~~~l~s~~~dg~i~~~d~~~~~-~~~~~~~~~~~v~~~~~~-~~~l~s~s~d~~i~iwd 243 (342)
T d2ovrb2 169 CLHTLQGHTNRVYSL--QFD-GIHVVSGSLDTSIRVWDVETGN-CIHTLTGHQSLTSGMELK-DNILVSGNADSTVKIWD 243 (342)
T ss_dssp EEEEECCCSSCEEEE--EEC-SSEEEEEETTSCEEEEETTTCC-EEEEECCCCSCEEEEEEE-TTEEEEEETTSCEEEEE
T ss_pred EEEEECCCCCCCCCC--CCC-CCEEEEEECCCEEEEEECCCCE-EEEEECCCCCCEEEEECC-CCEEEEECCCCEEEEEE
T ss_conf 667872754442100--689-9999999589939995255653-656741665320577068-99999974898899986
Q ss_pred CCCCCCCCCCCCEEEEEC---CCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 699964556876079718---78867999993199999999299919998259999720003479999999987878997
Q 002801 774 LSMCTSRVIDTPLHSFTG---HTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQF 850 (879)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~---h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 850 (879)
+... .....+.+ |...+.++.+ ++.++++|+.||.|++|++..++.+..+..... .+|...
T Consensus 244 ~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~--------~~~~~~ 307 (342)
T d2ovrb2 244 IKTG------QCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLES--------GGSGGV 307 (342)
T ss_dssp TTTC------CEEEEECSTTSCSSCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTT--------GGGTCE
T ss_pred CCCC------CCCCCCCCCCEEEECEEECCC--CCCEEEEECCCCEEEEEECCCCCEEEEEECCCC--------CCCCCC
T ss_conf 5544------221112210001101000013--798449990899899999999979899862347--------898897
Q ss_pred EEEEEEECCCCCEEEEEECCCC----EEEEEE
Q ss_conf 9999990799939999937984----999991
Q 002801 851 ISSVCWRGQSSNTLVAANSSGN----IKILEM 878 (879)
Q Consensus 851 V~~v~~~p~~~~~l~s~~~Dg~----I~iw~l 878 (879)
|++++|+|++. ++++++.||+ |++|++
T Consensus 308 v~~v~~s~~~~-~la~g~~dGt~~~~l~~~Df 338 (342)
T d2ovrb2 308 VWRIRASNTKL-VCAVGSRNGTEETKLLVLDF 338 (342)
T ss_dssp EEEEEECSSEE-EEEEECSSSSSCCEEEEEEC
T ss_pred EEEEEECCCCC-EEEEEECCCCCEEEEEEEEC
T ss_conf 89999879998-99999689997048999938
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.8e-39 Score=241.91 Aligned_cols=273 Identities=14% Similarity=0.137 Sum_probs=210.8
Q ss_pred ECCCCCCCEEEEEECCCE--EEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 404446816898504757--978721353458999889999938999999995899299995486447676411341772
Q 002801 537 INPFLEGLCKYLSFSKLR--VKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 537 l~~~~d~~i~~w~~~~~~--~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
+++..++.+++|+..+.+ ....+ .+|.++|++++|+|++++|++|+.|++|+||++..... .......
T Consensus 23 a~~~~~~~i~iw~~~~~~~~~~~~l-----~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~-----~~~~~~~ 92 (371)
T d1k8kc_ 23 AICPNNHEVHIYEKSGNKWVQVHEL-----KEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW-----KPTLVIL 92 (371)
T ss_dssp EEECSSSEEEEEEEETTEEEEEEEE-----ECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE-----EEEEECC
T ss_pred EEEECCCEEEEEECCCCCEEEEEEE-----CCCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCC-----CCCCCCC
T ss_conf 9994889899998889978999995-----58899888999979999999997999399986203321-----1001223
Q ss_pred CCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCE----EEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEC
Q ss_conf 3589813899817899969996079829999868872----889812478749999980399999999949994999969
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ----VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (879)
Q Consensus 615 ~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~----~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~ 690 (879)
.|...|.+++|+|. ++.+++++.|+.+++|++.... .......|...|.+++|+| ++.+|++|+.|++|++||.
T Consensus 93 ~~~~~v~~i~~~p~-~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~l~s~s~D~~v~v~~~ 170 (371)
T d1k8kc_ 93 RINRAARCVRWAPN-EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSA 170 (371)
T ss_dssp CCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEEC
T ss_pred CCCCCCCCCCCCCC-CCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCEECCCCCCEEEEEEE
T ss_conf 22110001111111-211000002576302544203343311100101112221111111-1111000134767999840
Q ss_pred CCCC------------------EEEEEE-CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEE
Q ss_conf 9991------------------488995-399669999628999799999679919999857996006998157887899
Q 002801 691 NQGV------------------SIGTIK-TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSY 751 (879)
Q Consensus 691 ~~~~------------------~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~ 751 (879)
.... .+.... +...+.+++|+|+ ++.+++++.|+.|++||+.+... +..+..|..+|.+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~s~~~d~~i~iwd~~~~~~-~~~~~~~~~~v~s 248 (371)
T d1k8kc_ 171 YIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRVAWVSHDSTVCLADADKKMA-VATLASETLPLLA 248 (371)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEEEEEETTTEEEEEEGGGTTE-EEEEECSSCCEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECC-CCCCCCCCCCCCCEEEEEECCCC-EEEEECCCCCCEE
T ss_conf 157643100122111111110112440476674789875123-32100001478605886410121-0000014665203
Q ss_pred EEEC-CCCEEEEEECCCCEEEEECCCCCCCC-----CC------------------------------CCEEEEECCCCC
Q ss_conf 9974-99889999769909999569996455-----68------------------------------760797187886
Q 002801 752 VKFV-DATTLVSASTDNTLKLWDLSMCTSRV-----ID------------------------------TPLHSFTGHTNV 795 (879)
Q Consensus 752 i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~-----~~------------------------------~~~~~~~~h~~~ 795 (879)
+.|+ ++.+|++| .|+.+++|......... .. ........|.+.
T Consensus 249 ~~fs~d~~~la~g-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~ 327 (371)
T d1k8kc_ 249 VTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNS 327 (371)
T ss_dssp EEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSC
T ss_pred EEECCCCCEEEEE-CCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCEECCCCCCC
T ss_conf 6546999799998-199267877608986288720206765421246220016850652058712455661412555698
Q ss_pred EEEEEEECCC----CEEEEEECCCCEEEEECCC
Q ss_conf 7999993199----9999992999199982599
Q 002801 796 KNFVGLSVWD----GYVATGSETNEVFVYHKAF 824 (879)
Q Consensus 796 v~~v~~sp~~----~~lasgs~Dg~v~iw~~~~ 824 (879)
|+.+++.+.+ ..|+|+|.||.|++|++..
T Consensus 328 I~~i~~~~~~~~~~~~~~T~g~Dg~v~iW~~~~ 360 (371)
T d1k8kc_ 328 VSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 360 (371)
T ss_dssp EEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred EEEEEEECCCCCCEEEEEEECCCCEEEEEECCC
T ss_conf 899999489986567999991899399996986
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-43 Score=267.50 Aligned_cols=220 Identities=15% Similarity=0.170 Sum_probs=173.3
Q ss_pred CCCCCCCCCC---CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHH
Q ss_conf 5423102589---9983222235734420465456789877634443445752888760885334530699998785688
Q 002801 8 GERFGVRGDD---SNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC 84 (879)
Q Consensus 8 ~~~~~~~~~~---~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~ 84 (879)
+..++|+-.. .....|.+|.. .+++.+|+|++.+++ +|.++ ...|+||||+.+|+|.+++......+++..+
T Consensus 28 ~~~vAvK~l~~~~~~~~~~~~Ev~--~~~~l~HpnIv~~~g-~~~~~--~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~ 102 (258)
T d1k2pa_ 28 QYDVAIKMIKEGSMSEDEFIEEAK--VMMNLSHEKLVQLYG-VCTKQ--RPIFIITEYMANGCLLNYLREMRHRFQTQQL 102 (258)
T ss_dssp TEEEEEEEEESSSSCHHHHHHHHH--HHHTCCCTTBCCEEE-EECCS--SSEEEEEECCTTEEHHHHHHSGGGCCCHHHH
T ss_pred CCEEEEEEECCCCCCHHHHHHHHH--HHHHCCCCCEEEEEE-EEEEC--CCEEEEEECCCCCCHHHHHHCCCCCCCHHHH
T ss_conf 989999998747577899999999--999668986015889-98507--8169999704899388864102467768999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 99999999999852103711036788623424478724530665569899986666545654446889999611224243
Q 002801 85 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 164 (879)
Q Consensus 85 ~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (879)
+.|+.||+.||.|||++||+||||||+||+++..+.+|++|||+++........
T Consensus 103 ~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~-------------------------- 156 (258)
T d1k2pa_ 103 LEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------------------------- 156 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC--------------------------
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCHHHEECCCCCCE--------------------------
T ss_conf 999999999999875468434665413588769984798861442023578722--------------------------
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCC
Q ss_conf 01223543324787654334233356655750000135332222333321000012357988431013345620044132
Q 002801 165 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 244 (879)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 244 (879)
..+...||..|+|||++
T Consensus 157 ---------------------------------------------------------------~~~~~~~t~~y~aPE~~ 173 (258)
T d1k2pa_ 157 ---------------------------------------------------------------SSVGSKFPVRWSPPEVL 173 (258)
T ss_dssp ---------------------------------------------------------------CCCCSCCCGGGCCHHHH
T ss_pred ---------------------------------------------------------------EECCCCCCCCCCCCHHH
T ss_conf ---------------------------------------------------------------52465788775780786
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHC----CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 69998865860048999999625----89998155768763024579902220391468999970499999999988986
Q 002801 245 AGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 245 ~~~~~s~~sDIySlGvil~el~~----pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil 320 (879)
.+..|+.++|||||||++|||++ ||.... .......+.....++.+...++.+.+|+.+||..+|++|||+.+++
T Consensus 174 ~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~-~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil 252 (258)
T d1k2pa_ 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT-NSETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILL 252 (258)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHH
T ss_pred CCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCC-HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHH
T ss_conf 379988521033643246739755999988999-9999999980797899654659999999997668976893999999
Q ss_pred HC
Q ss_conf 15
Q 002801 321 QS 322 (879)
Q Consensus 321 ~~ 322 (879)
+|
T Consensus 253 ~~ 254 (258)
T d1k2pa_ 253 SN 254 (258)
T ss_dssp HH
T ss_pred HH
T ss_conf 87
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2e-43 Score=269.74 Aligned_cols=229 Identities=18% Similarity=0.283 Sum_probs=172.6
Q ss_pred CCCCCCCCCCCCC---CCC----CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC--CCCEEEEEEECCCCHHHHHCCCC
Q ss_conf 5554231025899---983----22223573442046545678987763444344--57528887608853345306999
Q 002801 6 LRGERFGVRGDDS---NDF----ELRKHSDGVELTHGDHLRNQGGLSGVCENEAA--IDPFVHAIEWGDVSLRQWLDKPK 76 (879)
Q Consensus 6 ~~~~~~~~~~~~~---~~~----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~e~~~g~sL~~~l~~~~ 76 (879)
..|+.++++-... .+. .|.+|. ..+...+|+|++..+. ++.++.. ..+|+||||++|++|.+++...
T Consensus 30 ~~~~~vAiK~i~~~~~~~~~~~~~~~~E~--~~l~~~~hpniv~~~~-~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~- 105 (277)
T d1o6ya_ 30 RLHRDVAVKVLRADLARDPSFYLRFRREA--QNAAALNHPAIVAVYD-TGEAETPAGPLPYIVMEYVDGVTLRDIVHTE- 105 (277)
T ss_dssp TTTEEEEEEEECSTTTTCHHHHHHHHHHH--HHHHTCCCTTBCCEEE-EEEEECSSSEEEEEEEECCCEEEHHHHHHHH-
T ss_pred CCCCEEEEEEECHHHCCCHHHHHHHHHHH--HHHHHCCCCCCCCCCC-EEEECCCCCCEEEEEEECCCCCEEHHHHCCC-
T ss_conf 99989999998556646989999999999--9998569998873114-3543268876699999778898710112035-
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98785688999999999998521037110367886234244787245306655698999866665456544468899996
Q 002801 77 RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLP 156 (879)
Q Consensus 77 ~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (879)
+.+++.+++.|++||+.||+|||++||+||||||+||+++..+..+++|||.+.........
T Consensus 106 ~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~------------------ 167 (277)
T d1o6ya_ 106 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS------------------ 167 (277)
T ss_dssp CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC-----------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCC------------------
T ss_conf 89999999999999999999998579527634675566575432010034443221235443------------------
Q ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 11224243012235433247876543342333566557500001353322223333210000123579884310133456
Q 002801 157 LDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 236 (879)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 236 (879)
.......+||+
T Consensus 168 ---------------------------------------------------------------------~~~~~~~~Gt~ 178 (277)
T d1o6ya_ 168 ---------------------------------------------------------------------VTQTAAVIGTA 178 (277)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------------------------------CCCCCCCCCCC
T ss_conf ---------------------------------------------------------------------33346425762
Q ss_pred CEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCH--HHCCCHHHHHHHHHHCCCCCC
Q ss_conf 2004413269998865860048999999625---89998155768763024579902--220391468999970499999
Q 002801 237 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 237 ~Y~aPE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~li~~~L~~dP~ 311 (879)
.|+|||++.+..|+.++|||||||+||||++ ||............+.....++. ....++.+.+|+.+||.+||.
T Consensus 179 ~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~ 258 (277)
T d1o6ya_ 179 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPE 258 (277)
T ss_dssp TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGG
T ss_pred CCCCHHHHCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCHH
T ss_conf 43699998399999663202652899999769799899699999999984699997100347899999999998667976
Q ss_pred CCCCHHHHHHCCCC
Q ss_conf 99998898615234
Q 002801 312 GRPKMGELLQSEFL 325 (879)
Q Consensus 312 ~Rpt~~eil~~~~l 325 (879)
+||+..+.+.++|+
T Consensus 259 ~R~~sa~~l~~~l~ 272 (277)
T d1o6ya_ 259 NRYQTAAEMRADLV 272 (277)
T ss_dssp GSCSSHHHHHHHHH
T ss_pred HCHHHHHHHHHHHH
T ss_conf 77739999999999
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-42 Score=265.37 Aligned_cols=196 Identities=16% Similarity=0.134 Sum_probs=161.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCC---------------CCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 654567898776344434457528887608853345306999---------------98785688999999999998521
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK---------------RSVDVYECLHIFRQIVEIVYAAH 99 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~---------------~~~~~~~~~~i~~qi~~~l~~lH 99 (879)
..|+|++.+++ +|.++ ...|+||||+++|+|.++|+... ..+++.+++.+++||+.||.|+|
T Consensus 76 ~~HpnIv~~~~-~~~~~--~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH 152 (299)
T d1fgka_ 76 GKHKNIINLLG-ACTQD--GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA 152 (299)
T ss_dssp CCCTTBCCEEE-EECSS--SSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEECCC-CCCCC--CEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 39996973465-22018--8689999736999099999860677643222334574346799999999999999998766
Q ss_pred HCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 03711036788623424478724530665569899986666545654446889999611224243012235433247876
Q 002801 100 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 179 (879)
Q Consensus 100 s~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (879)
+++||||||||+|||++..+.+|++|||+++........
T Consensus 153 ~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------- 191 (299)
T d1fgka_ 153 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY----------------------------------------- 191 (299)
T ss_dssp HTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTT-----------------------------------------
T ss_pred HCCEEEEEECCCCEEECCCCCEEECCCHHHCCCCCCCCC-----------------------------------------
T ss_conf 379786302210224547897676221110113555554-----------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHH
Q ss_conf 54334233356655750000135332222333321000012357988431013345620044132699988658600489
Q 002801 180 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 259 (879)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlG 259 (879)
.......|++.|+|||++.+..|+.++||||||
T Consensus 192 -----------------------------------------------~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~G 224 (299)
T d1fgka_ 192 -----------------------------------------------KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFG 224 (299)
T ss_dssp -----------------------------------------------CCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred -----------------------------------------------CCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
T ss_conf -----------------------------------------------314667888466326675179888255547758
Q ss_pred HHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 99999625---899981557687630245799022203914689999704999999999889861
Q 002801 260 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 260 vil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (879)
|++|||++ |++...........+..+..++.+...++.+.+|+.+||+.+|++|||+.|+++
T Consensus 225 vvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 225 VLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp HHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 88887401798989999999999999728888987435299999999976679767939999999
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-43 Score=267.79 Aligned_cols=197 Identities=14% Similarity=0.106 Sum_probs=164.3
Q ss_pred ECCC-CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCC---------------CCCCCHHHHHHHHHHHHHHH
Q ss_conf 2046-5456789877634443445752888760885334530699---------------99878568899999999999
Q 002801 32 LTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP---------------KRSVDVYECLHIFRQIVEIV 95 (879)
Q Consensus 32 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~---------------~~~~~~~~~~~i~~qi~~~l 95 (879)
+.+. +|+|++.+++ +|.++ ..+|+||||++||+|.++|... ...+++..++++++||+.||
T Consensus 64 l~~l~~HpnIv~~~~-~~~~~--~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl 140 (309)
T d1fvra_ 64 LCKLGHHPNIINLLG-ACEHR--GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGM 140 (309)
T ss_dssp HTTCCCCTTBCCEEE-EEEET--TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHH
T ss_pred HHHCCCCCCEEEEEE-EEECC--CEEEEEEEECCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 986228998836788-88418--736999980289869999864035555512310123457899999999999999998
Q ss_pred HHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
Q ss_conf 85210371103678862342447872453066556989998666654565444688999961122424301223543324
Q 002801 96 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 175 (879)
Q Consensus 96 ~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (879)
.|+|+++|+||||||+|||++..+.+|++|||+++......
T Consensus 141 ~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~--------------------------------------- 181 (309)
T d1fvra_ 141 DYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--------------------------------------- 181 (309)
T ss_dssp HHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC---------------------------------------
T ss_pred HHHHCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCC---------------------------------------
T ss_conf 76630895455505204898688763874344322444223---------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 78765433423335665575000013533222233332100001235798843101334562004413269998865860
Q 002801 176 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 255 (879)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDI 255 (879)
......||..|+|||.+.+..|+.++||
T Consensus 182 ----------------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~sDv 209 (309)
T d1fvra_ 182 ----------------------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDV 209 (309)
T ss_dssp ----------------------------------------------------CC----CCTTTCCHHHHHHCEECHHHHH
T ss_pred ----------------------------------------------------CCCCEECCCCCCCHHHHCCCCCCCCCEE
T ss_conf ----------------------------------------------------4553013775555387526999962215
Q ss_pred HHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHC
Q ss_conf 048999999625---8999815576876302457990222039146899997049999999998898615
Q 002801 256 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 322 (879)
Q Consensus 256 ySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~ 322 (879)
|||||++|||++ |++........+..+..+..++.+...++.+.+|+.+||+.+|++||++.+++++
T Consensus 210 wSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 210 WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp HHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred EHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHH
T ss_conf 3138899999836899999999999999998268888876678999999999767896689499999999
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-42 Score=263.74 Aligned_cols=237 Identities=12% Similarity=0.120 Sum_probs=164.7
Q ss_pred CCCCCCCCCCCC---CCCCCCC-CCCCCEEECCCCCCCCCCCCCCCCCCC------CCCCCEEEEEEECCCCHHHHHCCC
Q ss_conf 555423102589---9983222-235734420465456789877634443------445752888760885334530699
Q 002801 6 LRGERFGVRGDD---SNDFELR-KHSDGVELTHGDHLRNQGGLSGVCENE------AAIDPFVHAIEWGDVSLRQWLDKP 75 (879)
Q Consensus 6 ~~~~~~~~~~~~---~~~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~e~~~g~sL~~~l~~~ 75 (879)
..|+.++|+-.. ......+ -.++...+...+|+|++..++ ++... .....|++||++.++.+..+. ..
T Consensus 33 ~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~-~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~-~~ 110 (318)
T d3blha1 33 KTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NV 110 (318)
T ss_dssp TTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEE-EEEC----------CEEEEEECCCEEHHHHHT-CT
T ss_pred CCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEE-EEECCCCCCCCCCCEEEEEEECCCCCCCCHHH-HC
T ss_conf 99979999998422246378999999999999835999660676-54024654444576389998535787410122-20
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99878568899999999999852103711036788623424478724530665569899986666545654446889999
Q 002801 76 KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (879)
Q Consensus 76 ~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (879)
...+++.+++.|++||+.||.|||++||+||||||+|||++.++.+|++|||+++..........
T Consensus 111 ~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~--------------- 175 (318)
T d3blha1 111 LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQP--------------- 175 (318)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----C---------------
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEEECCCCCEEEEECCEEEECCCCCCCCC---------------
T ss_conf 34433089999999999999885229988567672220366899687631350022355444321---------------
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 61122424301223543324787654334233356655750000135332222333321000012357988431013345
Q 002801 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (879)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 235 (879)
......+||
T Consensus 176 -----------------------------------------------------------------------~~~~~~~gT 184 (318)
T d3blha1 176 -----------------------------------------------------------------------NRYTNRVVT 184 (318)
T ss_dssp -----------------------------------------------------------------------CCCCSCCSC
T ss_pred -----------------------------------------------------------------------CCCCCEECC
T ss_conf -----------------------------------------------------------------------135660249
Q ss_pred CCEECCCCCCCC-CCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHH--HHCCCCCCCH-------------------
Q ss_conf 620044132699-98865860048999999625---8999815576876--3024579902-------------------
Q 002801 236 NWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS--SLRHRVLPPQ------------------- 290 (879)
Q Consensus 236 ~~Y~aPE~~~~~-~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~--~l~~~~~~~~------------------- 290 (879)
++|+|||++.+. .|+.++||||+||++|||++ ||.+......... .......+..
T Consensus 185 ~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (318)
T d3blha1 185 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQ 264 (318)
T ss_dssp GGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSC
T ss_pred HHHHHHHHHCCCCCCCCHHHCCCCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCCC
T ss_conf 78742899707999891787006786466174487998998999999999984189982553443203444332013344
Q ss_pred ---------HHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCC
Q ss_conf ---------2203914689999704999999999889861523459967
Q 002801 291 ---------LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 330 (879)
Q Consensus 291 ---------~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~ 330 (879)
.....+.+.+|+.+||++||++|||+.|+|+||||+....
T Consensus 265 ~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~~p~ 313 (318)
T d3blha1 265 KRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPM 313 (318)
T ss_dssp CBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGSSSSC
T ss_pred CCCCHHHHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCC
T ss_conf 5550334044459989999999987389658909999974950156999
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-43 Score=269.96 Aligned_cols=219 Identities=15% Similarity=0.101 Sum_probs=174.2
Q ss_pred CCCCCCCCCCCCCC--CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCC-CCCCCHHH
Q ss_conf 55423102589998--3222235734420465456789877634443445752888760885334530699-99878568
Q 002801 7 RGERFGVRGDDSND--FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYE 83 (879)
Q Consensus 7 ~~~~~~~~~~~~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~-~~~~~~~~ 83 (879)
+|..++++-..... ..|++|.. .+++.+|+|++.+++ +|.++ ....|+||||+++|+|.++|.+. ...+++..
T Consensus 29 ~~~~vAvK~i~~~~~~~~~~~E~~--~l~~l~HpnIv~~~g-~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~ 104 (262)
T d1byga_ 29 RGNKVAVKCIKNDATAQAFLAEAS--VMTQLRHSNLVQLLG-VIVEE-KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 104 (262)
T ss_dssp TTEEEEEEECCCCC--HHHHHTHH--HHTTCCCTTBCCEEE-EECCC---CCEEEECCCTTEEHHHHHHHHHHHHCCHHH
T ss_pred CCEEEEEEEECCHHHHHHHHHHHH--HHHHCCCCCEEEEEE-EEEEC-CCCEEEEEECCCCCCHHHHHHHCCCCCCCHHH
T ss_conf 990999999885777999999999--998678989854987-88723-89289999636999899998745788889999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 89999999999985210371103678862342447872453066556989998666654565444688999961122424
Q 002801 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 163 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (879)
++.|+.||+.||.|||+.+|+||||||+||+++..+.+|++|||+++.....
T Consensus 105 ~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~---------------------------- 156 (262)
T d1byga_ 105 LLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---------------------------- 156 (262)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------------------------
T ss_pred HHHHHHHHHHHCCCCCCCCEECCCCCHHHHEECCCCCEEECCCCCCEECCCC----------------------------
T ss_conf 9999999985232113376553666567601468997763245600344787----------------------------
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 30122354332478765433423335665575000013533222233332100001235798843101334562004413
Q 002801 164 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 243 (879)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 243 (879)
.....++..|+|||+
T Consensus 157 -----------------------------------------------------------------~~~~~~~~~y~aPE~ 171 (262)
T d1byga_ 157 -----------------------------------------------------------------QDTGKLPVKWTAPEA 171 (262)
T ss_dssp ----------------------------------------------------------------------CCTTTSCHHH
T ss_pred -----------------------------------------------------------------CCCCCCCCCCCCHHH
T ss_conf -----------------------------------------------------------------765566646778178
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHH
Q ss_conf 269998865860048999999625---89998155768763024579902220391468999970499999999988986
Q 002801 244 LAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 320 (879)
Q Consensus 244 ~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil 320 (879)
+.+..++.++|||||||++|||++ |++...........+.....++.+...++.+.+|+.+||+.||.+|||+.+++
T Consensus 172 l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~ 251 (262)
T d1byga_ 172 LREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLR 251 (262)
T ss_dssp HHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHH
T ss_conf 72798885887775799999999789999999999999999980899999765799999999997566976893999999
Q ss_pred HC
Q ss_conf 15
Q 002801 321 QS 322 (879)
Q Consensus 321 ~~ 322 (879)
++
T Consensus 252 ~~ 253 (262)
T d1byga_ 252 EQ 253 (262)
T ss_dssp HH
T ss_pred HH
T ss_conf 99
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-42 Score=263.78 Aligned_cols=232 Identities=16% Similarity=0.180 Sum_probs=168.5
Q ss_pred CCCCCCCCCCCCCCCCCCC----CCCCCCEEECCCCCCCCCCCCCCCCCCC---CCCCCEEEEEEECCCCHHHHHCCCCC
Q ss_conf 5555423102589998322----2235734420465456789877634443---44575288876088533453069999
Q 002801 5 LLRGERFGVRGDDSNDFEL----RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKR 77 (879)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~----r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~e~~~g~sL~~~l~~~~~ 77 (879)
...|+.++++-........ +-.++.-.+...+|+|++.++. ++... .....+++|+|+.|++|.+++.. +
T Consensus 40 ~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~-~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~--~ 116 (348)
T d2gfsa1 40 TKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--Q 116 (348)
T ss_dssp TTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHTT--C
T ss_pred CCCCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEE-EEEECCCCCCCCEEEEEEEECCCCHHHHCCC--C
T ss_conf 999979999998820028689999999999998668987425999-9963464566864999996258862320022--4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 87856889999999999985210371103678862342447872453066556989998666654565444688999961
Q 002801 78 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 78 ~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
.+++.+++.|++||+.||+|||++||+||||||+|||++..+.+|++|||.+......
T Consensus 117 ~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~---------------------- 174 (348)
T d2gfsa1 117 KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---------------------- 174 (348)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGG----------------------
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC----------------------
T ss_conf 5309999999999999999997388765166776334554322001321000125754----------------------
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12242430122354332478765433423335665575000013533222233332100001235798843101334562
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
.....|+..
T Consensus 175 -----------------------------------------------------------------------~~~~~g~~~ 183 (348)
T d2gfsa1 175 -----------------------------------------------------------------------MTGYVATRW 183 (348)
T ss_dssp -----------------------------------------------------------------------GSSSCHHHH
T ss_pred -----------------------------------------------------------------------CCCCCCCCC
T ss_conf -----------------------------------------------------------------------444345435
Q ss_pred EECCCCCCCCC-CCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCC-------------------------
Q ss_conf 00441326999-8865860048999999625---899981557687630245799-------------------------
Q 002801 238 YASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP------------------------- 288 (879)
Q Consensus 238 Y~aPE~~~~~~-~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~------------------------- 288 (879)
|+|||++.+.. ++.++|||||||++|||++ ||............+.....+
T Consensus 184 y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (348)
T d2gfsa1 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 263 (348)
T ss_dssp TSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCC
T ss_pred CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 55835533775678551243205899999768899788988999999997307997577320010244544430355787
Q ss_pred ----CHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCH
Q ss_conf ----02220391468999970499999999988986152345996714
Q 002801 289 ----PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 289 ----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~~~ 332 (879)
..+...++.+.+|+.+||+.||.+|||+.|+|+||||+....+.
T Consensus 264 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~~ 311 (348)
T d2gfsa1 264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 311 (348)
T ss_dssp CCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCTT
T ss_pred CCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCCC
T ss_conf 555662678999999999997758834593899985599548799986
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.2e-42 Score=265.10 Aligned_cols=206 Identities=14% Similarity=0.068 Sum_probs=165.7
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCC-----------------------CCCC
Q ss_conf 22235734420465456789877634443445752888760885334530699-----------------------9987
Q 002801 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----------------------KRSV 79 (879)
Q Consensus 23 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~-----------------------~~~~ 79 (879)
|+.|. ..+++.+|+|++..++ +|.+ ....|++||++.+|+|.++|... ...+
T Consensus 63 ~~~E~--~il~~l~h~niv~~~~-~~~~--~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 137 (301)
T d1lufa_ 63 FQREA--ALMAEFDNPNIVKLLG-VCAV--GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 137 (301)
T ss_dssp HHHHH--HHHHTCCCTTBCCEEE-EECS--SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHH--HHHHHCCCCCCCCCEE-EECC--CCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCC
T ss_conf 99999--9999668997655246-6605--98038999815899299999852755421000011100121034678898
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 85688999999999998521037110367886234244787245306655698999866665456544468899996112
Q 002801 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 80 ~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
++..++.|++||+.||.|+|+++||||||||+|||++.++.+|++|||+++........
T Consensus 138 ~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~--------------------- 196 (301)
T d1lufa_ 138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY--------------------- 196 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB---------------------
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCEEECCCHHHEECCCCCCC---------------------
T ss_conf 99999999999999855413578685488401168989992898331442113677641---------------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 24243012235433247876543342333566557500001353322223333210000123579884310133456200
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
...+...|+..|+
T Consensus 197 -------------------------------------------------------------------~~~~~~~~~~~y~ 209 (301)
T d1lufa_ 197 -------------------------------------------------------------------KADGNDAIPIRWM 209 (301)
T ss_dssp -------------------------------------------------------------------C----CCBCGGGC
T ss_pred -------------------------------------------------------------------CCCCCCCCCCCCC
T ss_conf -------------------------------------------------------------------1157777676767
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCH
Q ss_conf 4413269998865860048999999625---8999815576876302457990222039146899997049999999998
Q 002801 240 SPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 316 (879)
Q Consensus 240 aPE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 316 (879)
|||.+.+..|+.++|||||||++|||++ |++........+..++...+++.+...++++.+|+.+||+.+|.+|||+
T Consensus 210 aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~ 289 (301)
T d1lufa_ 210 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSF 289 (301)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred CHHHHCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCH
T ss_conf 98997268898056302523629999806899999989999999997399788873252999999999748896579399
Q ss_pred HHHHH
Q ss_conf 89861
Q 002801 317 GELLQ 321 (879)
Q Consensus 317 ~eil~ 321 (879)
.|+++
T Consensus 290 ~ev~~ 294 (301)
T d1lufa_ 290 CSIHR 294 (301)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-43 Score=267.24 Aligned_cols=210 Identities=17% Similarity=0.176 Sum_probs=157.3
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCC----CCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 5734420465456789877634443----445752888760885334530699998785688999999999998521037
Q 002801 27 SDGVELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
++...+.+.+|+|++.+++ ++..+ ....+|+||||+.|+.|..+. ..+++.+++.+++||+.||.|||++|
T Consensus 65 ~Ei~il~~l~hpnIv~~~~-~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~----~~~~~~~i~~~~~qil~gl~~LH~~g 139 (355)
T d2b1pa1 65 RELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG 139 (355)
T ss_dssp HHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCEEEEEE-EEECCCCCCCCCEEEEEEECCCHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999998648987648998-970256434576269998414467787650----38999999999999999998865221
Q ss_pred CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 11036788623424478724530665569899986666545654446889999611224243012235433247876543
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+||||||+|||++..+.+|++||+.++......
T Consensus 140 iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~---------------------------------------------- 173 (355)
T d2b1pa1 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---------------------------------------------- 173 (355)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC------------------------------------------------------
T ss_pred CCCCCCCCCCCCCCCCCCEEEECHHHHHCCCCCC----------------------------------------------
T ss_conf 1245677632113654431320102321146665----------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 34233356655750000135332222333321000012357988431013345620044132699988658600489999
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil 262 (879)
..+..++|+.|+|||++.+..++.++||||+||++
T Consensus 174 ---------------------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l 208 (355)
T d2b1pa1 174 ---------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 208 (355)
T ss_dssp ----------------------------------------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHH
T ss_conf ---------------------------------------------53322146555581331477778774333566257
Q ss_pred HHHHC---CCCCCHHHHHHHHHHCC---------------------CC-----------C--------CCHHHCCCHHHH
Q ss_conf 99625---89998155768763024---------------------57-----------9--------902220391468
Q 002801 263 FELFC---PFSTGEEKTRTMSSLRH---------------------RV-----------L--------PPQLLLKFPKEA 299 (879)
Q Consensus 263 ~el~~---pf~~~~~~~~~~~~l~~---------------------~~-----------~--------~~~~~~~~~~~~ 299 (879)
|||++ ||............+.. .. . .......++.+.
T Consensus 209 ~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 288 (355)
T d2b1pa1 209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQAR 288 (355)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHH
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 89865989988897788999999720589879998765667777641754356664212643335432101333799999
Q ss_pred HHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCH
Q ss_conf 999970499999999988986152345996714
Q 002801 300 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 332 (879)
Q Consensus 300 ~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~~~ 332 (879)
+|+.+||..||++|||+.|+|+||||+....+.
T Consensus 289 dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~~~ 321 (355)
T d2b1pa1 289 DLLSKMLVIDPAKRISVDDALQHPYINVWYDPA 321 (355)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCHH
T ss_pred HHHHHHCCCCHHHCCCHHHHHCCCCCCCCCCCC
T ss_conf 999998769945790899996694208788810
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.1e-38 Score=238.23 Aligned_cols=286 Identities=13% Similarity=0.133 Sum_probs=199.3
Q ss_pred CCEEEEEECCCCCEEEEEECCC-CEEEEECCCCCCCCCCCCCCEEEECC-CCCEEEEEEECC-CCCEEEEEECCCCEEEE
Q ss_conf 9889999938999999995899-29999548644767641134177235-898138998178-99969996079829999
Q 002801 569 NLVCSLSFDRDGELFAAAGVNK-KIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSY-IKSQIASSNFEGVVQVW 645 (879)
Q Consensus 569 ~~V~si~fspdg~~lat~~~dg-~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~I~~i~~~~~-~~~~l~s~~~dg~V~iw 645 (879)
+.+++++|+|+++.||.++.+. .|+.|+..... .........| ...|++++|+|. ++.+|++|+.||+|++|
T Consensus 18 ~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~~-----~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iW 92 (325)
T d1pgua1 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSK-----VPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 92 (325)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCS-----SCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCEEEEEEECCCCC-----CCCEEEEECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 9847999989979999996998799997688887-----65028990789998899998117999799999489977985
Q ss_pred ECCCCEE--------EEEECCCCCCEEEEEEECCCCCEEEEEEC--CCCEEEEECCCCCEEEEEEC-CCCEEEEEEECCC
Q ss_conf 8688728--------89812478749999980399999999949--99499996999914889953-9966999962899
Q 002801 646 DVSRSQV--------LTEMREHERRVWSIDFSSADPTLLASGSD--DGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDS 714 (879)
Q Consensus 646 d~~t~~~--------~~~~~~h~~~V~si~fsp~~~~~lasgs~--Dg~V~iwD~~~~~~i~~~~~-~~~v~~v~~~p~~ 714 (879)
|+...+. ...+..|..+|++++|++ ++.++++++. ++.+.+|+..+++.+..+.. ...|.++.|+|+.
T Consensus 93 d~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 171 (325)
T d1pgua1 93 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSR 171 (325)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSS
T ss_pred EECCCCCEEEEECCCCCCCCCCCCCEEEEEECC-CCCCCCEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 405886215651002541136567377999899-9882201001244047888502331100120012343211112343
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEE---ECCCCCCEEEEEEC-C-CCEEEEEECCCCEEEEECCCCCCCCCCCCEEEE
Q ss_conf 979999967991999985799600699---81578878999974-9-988999976990999956999645568760797
Q 002801 715 GRSLAFGSADHRIYYYDLRNSKIPLCT---LIGHNKTVSYVKFV-D-ATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSF 789 (879)
Q Consensus 715 ~~~l~tgs~D~~I~iwDl~~~~~~~~~---~~~h~~~V~~i~fs-~-~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~ 789 (879)
...+++++.|+.+++||+...+. ... ...|...|+++.|+ + +.++++++.|+.|++||++++ .++.++
T Consensus 172 ~~~~~~~~~d~~v~~~d~~~~~~-~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~------~~~~~l 244 (325)
T d1pgua1 172 PMRSMTVGDDGSVVFYQGPPFKF-SASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG------EFLKYI 244 (325)
T ss_dssp SCEEEEEETTTEEEEEETTTBEE-EEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC------CEEEEC
T ss_pred CCEEEEEECCCCCCCCCCCCCCC-CEECCCCCCCCCCCEEEEECCCCCEECCCCCCCCCEEEEEECCC------CCCCCC
T ss_conf 20688862111221111221100-00000015777752776303453100001123321013430012------221111
Q ss_pred ECCCCCEEEEEEE---CCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEE
Q ss_conf 1878867999993---1999999992999199982599997200034799999999878789979999990799939999
Q 002801 790 TGHTNVKNFVGLS---VWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVA 866 (879)
Q Consensus 790 ~~h~~~v~~v~~s---p~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s 866 (879)
.+|...+..+.|+ +++.+|++++.|+.|++|++..++++..+...... ......++.|.+++ .|++
T Consensus 245 ~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~--~l~s 313 (325)
T d1pgua1 245 EDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQ---------LGNQQVGVVATGNG--RIIS 313 (325)
T ss_dssp CBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTC---------GGGCEEEEEEEETT--EEEE
T ss_pred CCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEEECCCC---------CCCEEEEEEECCCC--EEEE
T ss_conf 111111111000000368999999958993999999999788999954874---------06769999988999--9999
Q ss_pred EECCCCEEEEEE
Q ss_conf 937984999991
Q 002801 867 ANSSGNIKILEM 878 (879)
Q Consensus 867 ~~~Dg~I~iw~l 878 (879)
++.||.|++|+|
T Consensus 314 ~s~dg~i~vwdl 325 (325)
T d1pgua1 314 LSLDGTLNFYEL 325 (325)
T ss_dssp EETTSCEEEEET
T ss_pred EECCCEEEEEEC
T ss_conf 979999999979
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-42 Score=264.05 Aligned_cols=206 Identities=15% Similarity=0.041 Sum_probs=165.7
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 22235734420465456789877634443445752888760885334530699998785688999999999998521037
Q 002801 23 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 23 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
|.+|.. .+...+|+|++.+++ +|.++ ..|+||||+++++|.+.+......+++..++.++.||+.||.|||++|
T Consensus 58 ~~~Ei~--~l~~l~H~nIv~~~g-~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ 131 (273)
T d1u46a_ 58 FIREVN--AMHSLDHRNLIRLYG-VVLTP---PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131 (273)
T ss_dssp HHHHHH--HHHHCCCTTBCCEEE-EECSS---SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHH--HHHHCCCCCEEEEEE-EEEEC---CHHEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 999999--998689999878987-77401---001146542386125444212689999999999999999998752178
Q ss_pred CCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 11036788623424478724530665569899986666545654446889999611224243012235433247876543
Q 002801 103 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 182 (879)
Q Consensus 103 ivH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (879)
|+||||||+||+++..+.+|++|||+++.........
T Consensus 132 iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~------------------------------------------- 168 (273)
T d1u46a_ 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHY------------------------------------------- 168 (273)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEE-------------------------------------------
T ss_pred EEEEEECHHHHCCCCCCCEEECCCHHHHHCCCCCCCC-------------------------------------------
T ss_conf 7520566888156556543325611555303588752-------------------------------------------
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 34233356655750000135332222333321000012357988431013345620044132699988658600489999
Q 002801 183 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 262 (879)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil 262 (879)
.......|+.+|+|||++.+..++.++|||||||++
T Consensus 169 --------------------------------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil 204 (273)
T d1u46a_ 169 --------------------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204 (273)
T ss_dssp --------------------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------EECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHH
T ss_conf --------------------------------------------654763257310799998379999421566148999
Q ss_pred HHHHC----CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 99625----899981557687630245799022203914689999704999999999889861
Q 002801 263 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 263 ~el~~----pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (879)
|||++ ||.............+....++.+...++.+.+|+.+||+.+|.+|||+.++++
T Consensus 205 ~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 205 WEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 999968999999969999999998479999985445399999999976889667929999999
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.4e-42 Score=260.11 Aligned_cols=196 Identities=14% Similarity=0.134 Sum_probs=158.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCC-----------------CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 65456789877634443445752888760885334530699-----------------9987856889999999999985
Q 002801 35 GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----------------KRSVDVYECLHIFRQIVEIVYA 97 (879)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~-----------------~~~~~~~~~~~i~~qi~~~l~~ 97 (879)
.+|+|++.+++ +|.+. ...|++||||++|+|.++|++. ...+++.+++.|+.||+.||.|
T Consensus 84 ~~HpnIv~~~g-~~~~~--~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~ 160 (311)
T d1t46a_ 84 GNHMNIVNLLG-ACTIG--GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 160 (311)
T ss_dssp CCCTTBCCEEE-EECSS--SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEE-EEEEC--CEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 69998878998-98319--9789999737998799999853566544444533222334588999999999999999998
Q ss_pred HHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 21037110367886234244787245306655698999866665456544468899996112242430122354332478
Q 002801 98 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 177 (879)
Q Consensus 98 lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (879)
||++||+||||||+||+++..+.+|++|||.++........
T Consensus 161 LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~--------------------------------------- 201 (311)
T d1t46a_ 161 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY--------------------------------------- 201 (311)
T ss_dssp HHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTS---------------------------------------
T ss_pred HHHCCEEECCCCCCCCCCCCCCCCCCCCCCHHEECCCCCCC---------------------------------------
T ss_conf 87579266624102100002575210234010233678861---------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHH
Q ss_conf 76543342333566557500001353322223333210000123579884310133456200441326999886586004
Q 002801 178 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 257 (879)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIyS 257 (879)
...+...||+.|+|||++.+..++.++||||
T Consensus 202 -------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS 232 (311)
T d1t46a_ 202 -------------------------------------------------VVKGNARLPVKWMAPESIFNCVYTFESDVWS 232 (311)
T ss_dssp -------------------------------------------------EECSSSEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred -------------------------------------------------EEEEECCCCHHHCCHHHHCCCCCCCCCCCCC
T ss_conf -------------------------------------------------5862013596876778861799997400102
Q ss_pred HHHHHHHHHC---CCC-CCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf 8999999625---899-981557687630245799022203914689999704999999999889861
Q 002801 258 LGVLLFELFC---PFS-TGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 258 lGvil~el~~---pf~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (879)
|||++|||++ |++ ...........+.....+......++.+.+|+.+||..||.+|||+.++++
T Consensus 233 ~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 233 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (311)
T ss_dssp HHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 58999999858998877899899999998668988985436599999999975779657929999999
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=7.7e-42 Score=260.33 Aligned_cols=226 Identities=15% Similarity=0.145 Sum_probs=165.2
Q ss_pred CCCCCCCCCCCCCCC------CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCC
Q ss_conf 555423102589998------32222357344204654567898776344434457528887608853345306999987
Q 002801 6 LRGERFGVRGDDSND------FELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 79 (879)
Q Consensus 6 ~~~~~~~~~~~~~~~------~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~ 79 (879)
..|+.++++-..... ..|.+| ...+...+|+|++.++. ++.++ ...|++||++.++.+..+.... +.+
T Consensus 24 ~~~~~vAvK~i~~~~~~~~~~~~~~~E--~~il~~l~hpnIv~~~~-~~~~~--~~~~i~~e~~~~~~~~~~~~~~-~~l 97 (286)
T d1ob3a_ 24 NYGETFALKKIRLEKEDEGIPSTTIRE--ISILKELKHSNIVKLYD-VIHTK--KRLVLVFEHLDQDLKKLLDVCE-GGL 97 (286)
T ss_dssp TTSCEEEEEEECCSSGGGCCCHHHHHH--HHGGGGCCCTTBCCEEE-EEECS--SCEEEEEECCSEEHHHHHHTST-TCC
T ss_pred CCCCEEEEEEEEHHHCCHHHHHHHHHH--HHHHHHCCCCCEEEEEE-ECCCC--CCEEEEEEEEHHHHHHHHHHHC-CCC
T ss_conf 899999999981232685899999999--99998679986876601-20467--7315899740045678998604-775
Q ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 85688999999999998521037110367886234244787245306655698999866665456544468899996112
Q 002801 80 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 159 (879)
Q Consensus 80 ~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (879)
++..++.|++||+.||.|||++|||||||||+|||++.++.+|++|||.+.....+..
T Consensus 98 ~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~---------------------- 155 (286)
T d1ob3a_ 98 ESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR---------------------- 155 (286)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCEEECCCCCCEECCCCCC----------------------
T ss_conf 1445689999999999986057488267877505686899787323664301146765----------------------
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 24243012235433247876543342333566557500001353322223333210000123579884310133456200
Q 002801 160 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 239 (879)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~ 239 (879)
......+++.|+
T Consensus 156 --------------------------------------------------------------------~~~~~~~~~~y~ 167 (286)
T d1ob3a_ 156 --------------------------------------------------------------------KYTHEIVTLWYR 167 (286)
T ss_dssp --------------------------------------------------------------------------CCCTTC
T ss_pred --------------------------------------------------------------------CCCEECCCCHHH
T ss_conf --------------------------------------------------------------------410102431101
Q ss_pred CCCCCCCC-CCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCC-------------------------CC--C
Q ss_conf 44132699-98865860048999999625---899981557687630245-------------------------79--9
Q 002801 240 SPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR-------------------------VL--P 288 (879)
Q Consensus 240 aPE~~~~~-~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~-------------------------~~--~ 288 (879)
|||.+.+. .++.++|||||||++|||++ ||................ .. +
T Consensus 168 ~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (286)
T d1ob3a_ 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWE 247 (286)
T ss_dssp CHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGG
T ss_pred HHHHHHCCCCCCCCEEEHHCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHCCCCCCCCCCCCHH
T ss_conf 37887178888841002111758999977979989889899999999863899711042123332214333335676466
Q ss_pred CHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 022203914689999704999999999889861523459
Q 002801 289 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 327 (879)
Q Consensus 289 ~~~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~ 327 (879)
......++.+.+|+.+||+.||++|||+.|+|+||||++
T Consensus 248 ~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 248 SFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp GTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred HHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCCCCCC
T ss_conf 651258999999999986689668909999856922074
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-41 Score=257.03 Aligned_cols=231 Identities=14% Similarity=0.103 Sum_probs=169.5
Q ss_pred CCCCCCCCCCC---CCCCCC-CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHH
Q ss_conf 55423102589---998322-22357344204654567898776344434457528887608853345306999987856
Q 002801 7 RGERFGVRGDD---SNDFEL-RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 7 ~~~~~~~~~~~---~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~ 82 (879)
.|+.++++-.. ...... +-.++...+.+.+|+|++.++. ++.+. ...+++++++.|++|..++... +.+++.
T Consensus 26 ~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~-~~~~~--~~~~iv~~~~~~~~l~~~~~~~-~~~~~~ 101 (292)
T d1unla_ 26 THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD-VLHSD--KKLTLVFEFCDQDLKKYFDSCN-GDLDPE 101 (292)
T ss_dssp TCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEE-EEECS--SEEEEEEECCSEEHHHHHHHTT-TCCCHH
T ss_pred CCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECC-CCCCC--CCEEEEEEECCCCCCCCCCCCC-CCCCHH
T ss_conf 9969999998032178689999999999998567578882135-44444--3115886302332221121235-654036
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 88999999999998521037110367886234244787245306655698999866665456544468899996112242
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 162 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (879)
+++.+++|++.||+|||++||+||||||+|||++..+.+|++|||.++....+...
T Consensus 102 ~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~------------------------ 157 (292)
T d1unla_ 102 IVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC------------------------ 157 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC------------------------
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEECCHHHCCCCCCCC------------------------
T ss_conf 78999999999987743399860014676121133782665204601104688751------------------------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 43012235433247876543342333566557500001353322223333210000123579884310133456200441
Q 002801 163 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 242 (879)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE 242 (879)
.....++.+|+|||
T Consensus 158 ------------------------------------------------------------------~~~~~~~~~~~~pe 171 (292)
T d1unla_ 158 ------------------------------------------------------------------YSAEVVTLWYRPPD 171 (292)
T ss_dssp ------------------------------------------------------------------CCSCCSCGGGCCHH
T ss_pred ------------------------------------------------------------------CEEECCCCCHHHHH
T ss_conf ------------------------------------------------------------------00103443101466
Q ss_pred CCCCCC-CCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCC----------------------------CCCCH
Q ss_conf 326999-8865860048999999625---899981557687630245----------------------------79902
Q 002801 243 ELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR----------------------------VLPPQ 290 (879)
Q Consensus 243 ~~~~~~-~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~----------------------------~~~~~ 290 (879)
++.+.. ++.++|||||||++|||++ ||+........+..+... .....
T Consensus 172 ~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (292)
T d1unla_ 172 VLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251 (292)
T ss_dssp HHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTT
T ss_pred HHCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHC
T ss_conf 75069888804440265418899851899998899999999999861189973551344322211334445443104330
Q ss_pred HHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC
Q ss_conf 22039146899997049999999998898615234599671
Q 002801 291 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 331 (879)
Q Consensus 291 ~~~~~~~~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~~~ 331 (879)
....++.+.+|+.+||++||.+|||+.|+|+||||++...|
T Consensus 252 ~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~~~ 292 (292)
T d1unla_ 252 VPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292 (292)
T ss_dssp STTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCSCC
T ss_pred CCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCHHHCCCCCC
T ss_conf 65689999999999864996689099999649534079897
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.6e-37 Score=232.66 Aligned_cols=272 Identities=15% Similarity=0.213 Sum_probs=214.7
Q ss_pred EEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEE
Q ss_conf 79787213534589998899999389999999958992999954864476764113417723589813899817899969
Q 002801 554 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 633 (879)
Q Consensus 554 ~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l 633 (879)
++.+.+ .+|..+|++++|+| |+||+.||+|++|++.+.. ..|...|.++.+.+ +..+
T Consensus 4 ~~i~~l-----~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~------------~~h~~~V~~~~~~~--~~~~ 60 (287)
T d1pgua2 4 EVLKTI-----SGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH------------QDHSNLIVSLDNSK--AQEY 60 (287)
T ss_dssp EEEEEE-----CCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE------------CCCCSCEEEEECCS--TTCC
T ss_pred CEEEEE-----CCCCCCEEEEEECC----EEEEECCCEEEEEECCCCC------------CCCCCCEEEEEECC--CCEE
T ss_conf 034999-----88798649999895----7898489919999899988------------88778789999659--9728
Q ss_pred EEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEEECC
Q ss_conf 99607982999986887288981247874999998039999999994999499996999914889953996699996289
Q 002801 634 ASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLD 713 (879)
Q Consensus 634 ~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~ 713 (879)
++++.|+++++|++... .....+..+.+++ ++..++++ .++.+.+|+..++..+..+.....+.+ ++|+
T Consensus 61 ~s~s~D~~v~~w~~~~~-------~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 129 (287)
T d1pgua2 61 SSISWDDTLKVNGITKH-------EFGSQPKVASANN-DGFTAVLT-NDDDLLILQSFTGDIIKSVRLNSPGSA--VSLS 129 (287)
T ss_dssp EEEETTTEEEETTEEEE-------ECSSCEEEEEECS-SSEEEEEE-TTSEEEEEETTTCCEEEEEECSSCEEE--EEEC
T ss_pred EEEEECCCCCCCCCCCC-------CCCCCEEEEEECC-CCCEEEEE-ECCCCEEEECCCEEEEEECCCCCEEEE--EECC
T ss_conf 98861012221111111-------1122101466416-78569996-033210000110035431012220356--5214
Q ss_pred CCCEEEEEECCC-EEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEEC
Q ss_conf 997999996799-199998579960069981578878999974-998899997699099995699964556876079718
Q 002801 714 SGRSLAFGSADH-RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTG 791 (879)
Q Consensus 714 ~~~~l~tgs~D~-~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~ 791 (879)
+..+++++.++ .+++|++............|...++++.|+ ++.+|++++.|+.|++||+.+.. .....+.+
T Consensus 130 -~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~-----~~~~~~~~ 203 (287)
T d1pgua2 130 -QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE-----VKTSRWAF 203 (287)
T ss_dssp -SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-----EEECCSCC
T ss_pred -CCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCC-----CCCCCCCC
T ss_conf -751110002210002100012210001210247853699951676521101111110000002332-----11000111
Q ss_pred CCCCEEEEEEECC----------CCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 7886799999319----------999999929991999825999972000347999999998787899799999907999
Q 002801 792 HTNVKNFVGLSVW----------DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSS 861 (879)
Q Consensus 792 h~~~v~~v~~sp~----------~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~ 861 (879)
|...+++++|+|. +.++++|+.|+.|++|++..+....... .+|.+.|++++|+|++
T Consensus 204 h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~------------~~h~~~V~~v~~~~~~- 270 (287)
T d1pgua2 204 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKAL------------NAHKDGVNNLLWETPS- 270 (287)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEET------------TSSTTCEEEEEEEETT-
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEE------------CCCCCCEEEEEECCCC-
T ss_conf 111110000013654100126788702766499959998889997589992------------7878985899998999-
Q ss_pred CEEEEEECCCCEEEEEEC
Q ss_conf 399999379849999919
Q 002801 862 NTLVAANSSGNIKILEMV 879 (879)
Q Consensus 862 ~~l~s~~~Dg~I~iw~lv 879 (879)
.|++++.||.|++|++|
T Consensus 271 -~l~s~g~D~~v~iW~i~ 287 (287)
T d1pgua2 271 -TLVSSGADACIKRWNVV 287 (287)
T ss_dssp -EEEEEETTSCEEEEEEC
T ss_pred -EEEEEECCCEEEEEEEC
T ss_conf -89999799929999979
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.2e-36 Score=229.44 Aligned_cols=266 Identities=14% Similarity=0.185 Sum_probs=207.9
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEC
Q ss_conf 24044468168985047579787213534589998899999389999999958992999954864476764113417723
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 615 (879)
++++..|+.+++|+..+.+....+.. +|.+.|++++|+|++.+ ++++.|+.+++|+........ .......
T Consensus 27 l~s~s~Dg~v~vWd~~~~~~~~~~~~----~h~~~v~~v~~~~~g~~-~~~~~d~~v~~~~~~~~~~~~----~~~~~~~ 97 (299)
T d1nr0a2 27 LFSADAEGHINSWDISTGISNRVFPD----VHATMITGIKTTSKGDL-FTVSWDDHLKVVPAGGSGVDS----SKAVANK 97 (299)
T ss_dssp EEEEETTSCEEEEETTTCCEEECSSC----SCSSCEEEEEECTTSCE-EEEETTTEEEEECSSSSSSCT----TSCCEEE
T ss_pred EEEECCCCEEEEEECCCCCEEEEECC----CCCCCEEEEEEECCCEE-ECCCCEEEEEEECCCCCCCCC----CCCCCCC
T ss_conf 99990899299999999968899837----88774899884033112-102310268873167762011----1000111
Q ss_pred CCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCE
Q ss_conf 58981389981789996999607982999986887288981247874999998039999999994999499996999914
Q 002801 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVS 695 (879)
Q Consensus 616 ~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~ 695 (879)
+...+.+++|++. +..++++. ++.+.+|+... ..... ....+.+++|+| ++.++++|+.|+.|++||+.++..
T Consensus 98 ~~~~~~~~~~s~~-g~~~~~~~-~~~i~~~~~~~--~~~~~--~~~~~~~~~~s~-~~~~l~~g~~dg~i~~~d~~~~~~ 170 (299)
T d1nr0a2 98 LSSQPLGLAVSAD-GDIAVAAC-YKHIAIYSHGK--LTEVP--ISYNSSCVALSN-DKQFVAVGGQDSKVHVYKLSGASV 170 (299)
T ss_dssp CSSCEEEEEECTT-SSCEEEEE-SSEEEEEETTE--EEEEE--CSSCEEEEEECT-TSCEEEEEETTSEEEEEEEETTEE
T ss_pred CCCCCCCCCCCCC-CCCCCCCC-CCCCCCCCCCC--CCCCC--CCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 1344321001122-11111222-22221111111--11101--111233221111-111111111111111111111111
Q ss_pred E--EEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCE--EEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEE
Q ss_conf 8--89953996699996289997999996799199998579960--069981578878999974-998899997699099
Q 002801 696 I--GTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI--PLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLK 770 (879)
Q Consensus 696 i--~~~~~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~--~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~ 770 (879)
. ....+...|.+++|+|+ +.++++++.|+.|++||+.+... ....+.+|...|+++.|+ ++.+|++|+.|+.|+
T Consensus 171 ~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~ 249 (299)
T d1nr0a2 171 SEVKTIVHPAEITSVAFSNN-GAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 249 (299)
T ss_dssp EEEEEEECSSCEEEEEECTT-SSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEE
T ss_conf 11111111111111111111-11111111111111111111111111111111111111112466645138882899799
Q ss_pred EEECCCCCCCCCCCCEEEEECCC-CCEEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 99569996455687607971878-867999993199999999299919998259
Q 002801 771 LWDLSMCTSRVIDTPLHSFTGHT-NVKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 771 iwd~~~~~~~~~~~~~~~~~~h~-~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~ 823 (879)
+||+..... .++.....|. ..++++.| +++.+|++||.|+.|++|++.
T Consensus 250 iwd~~~~~~----~~~~~~~~~~~~~v~~~~~-~~~~~l~s~s~D~~i~iWdl~ 298 (299)
T d1nr0a2 250 VWNMNKPSD----HPIIIKGAHAMSSVNSVIW-LNETTIVSAGQDSNIKFWNVP 298 (299)
T ss_dssp EEETTCTTS----CCEEETTSSTTSCEEEEEE-EETTEEEEEETTSCEEEEECC
T ss_pred EEECCCCCC----CEEEEECCCCCCCEEEEEE-CCCCEEEEEECCCEEEEEECC
T ss_conf 998999973----1489834898896899997-798999999289979999444
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.9e-42 Score=259.96 Aligned_cols=206 Identities=19% Similarity=0.183 Sum_probs=158.0
Q ss_pred EECCCCCC-CCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 42046545-67898776344434457528887608853345306999987856889999999999985210371103678
Q 002801 31 ELTHGDHL-RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 109 (879)
Q Consensus 31 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~Dlk 109 (879)
.+.+.+|. |++.++. ++.+ ....|++|||+.|++|.+++... +.+++..++.+++||+.||.|+|++||+|||||
T Consensus 81 il~~l~h~pnIv~~~~-~~~~--~~~~~~v~e~~~~~~L~~~i~~~-~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiK 156 (322)
T d1vzoa_ 81 VLEHIRQSPFLVTLHY-AFQT--ETKLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIK 156 (322)
T ss_dssp HHHHHHTCTTBCCEEE-EEEE--TTEEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHCCCCCEEEEEEE-EECC--CCCEEEEEECCCCCHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCC
T ss_conf 9986467983999620-0024--87300123123411799998730-454378888889999999988514998965477
Q ss_pred CCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86234244787245306655698999866665456544468899996112242430122354332478765433423335
Q 002801 110 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 189 (879)
Q Consensus 110 P~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (879)
|+||+++..+.+|++|||+++.+......
T Consensus 157 p~Nill~~~~~vkL~DFG~a~~~~~~~~~--------------------------------------------------- 185 (322)
T d1vzoa_ 157 LENILLDSNGHVVLTDFGLSKEFVADETE--------------------------------------------------- 185 (322)
T ss_dssp GGGEEECTTSCEEESCSSEEEECCGGGGG---------------------------------------------------
T ss_pred CCCEEECCCCCEEEEECCCHHHHCCCCCC---------------------------------------------------
T ss_conf 32012469998887413202220344443---------------------------------------------------
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCC--CCCCCCCHHHHHHHHHHHC
Q ss_conf 66557500001353322223333210000123579884310133456200441326999--8865860048999999625
Q 002801 190 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLFELFC 267 (879)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~s~~sDIySlGvil~el~~ 267 (879)
......|++.|++||++.+.. ++.++|||||||+||||++
T Consensus 186 --------------------------------------~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyellt 227 (322)
T d1vzoa_ 186 --------------------------------------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 227 (322)
T ss_dssp --------------------------------------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf --------------------------------------221222333331068760577688713251777799999976
Q ss_pred ---CCCCCHHHHHHHHHH--CCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCC-----CHHHHHHCCCCCCCC
Q ss_conf ---899981557687630--24579902220391468999970499999999-----988986152345996
Q 002801 268 ---PFSTGEEKTRTMSSL--RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 329 (879)
Q Consensus 268 ---pf~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp-----t~~eil~~~~l~~~~ 329 (879)
||............. .....++.+...++.+.+|+.+||.++|.+|| |++|+++||||+...
T Consensus 228 G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~ 299 (322)
T d1vzoa_ 228 GASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 299 (322)
T ss_dssp SSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCHHHCCCC
T ss_conf 899988887777999999833568998865479999999999744589881999745099997497234899
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.7e-36 Score=226.01 Aligned_cols=250 Identities=17% Similarity=0.233 Sum_probs=199.5
Q ss_pred CCC-CCCEEEEEECC--CCCEEEEEECCCCEEEEECCCCCCCCCC-CCCCEEEECCCCCEEEEEEECCCCCEEEEEE--C
Q ss_conf 589-99889999938--9999999958992999954864476764-1134177235898138998178999699960--7
Q 002801 565 LNS-SNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRD-IHYPVVEMASRSKLSSICWNSYIKSQIASSN--F 638 (879)
Q Consensus 565 ~~h-~~~V~si~fsp--dg~~lat~~~dg~I~iwd~~~~~~~~~~-~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~--~ 638 (879)
.+| ...|++++|+| ++.++|+|+.||+|+||++......... .........+..+|.+++|++. +..+++++ .
T Consensus 59 ~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~-~~~l~~~~~~~ 137 (325)
T d1pgua1 59 TGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE-GRRLCVVGEGR 137 (325)
T ss_dssp CTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT-SSEEEEEECCS
T ss_pred ECCCCCCEEEEEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEECCC-CCCCCEEECCC
T ss_conf 07899988999981179997999994899779854058862156510025411365673779998999-88220100124
Q ss_pred CCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC----CCCEEEEEEECCC
Q ss_conf 982999986887288981247874999998039999999994999499996999914889953----9966999962899
Q 002801 639 EGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT----KANVCCVQFPLDS 714 (879)
Q Consensus 639 dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~----~~~v~~v~~~p~~ 714 (879)
++.+.+|+.++++.+..+..|...|+++.|+|..+..+++++.|+.+++||....+....+.. ...|.+++|+|+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~ 217 (325)
T d1pgua1 138 DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 217 (325)
T ss_dssp SCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCEEEEECCCC
T ss_conf 40478885023311001200123432111123432068886211122111122110000000015777752776303453
Q ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCE----EEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEE
Q ss_conf 97999996799199998579960069981578878----99997499889999769909999569996455687607971
Q 002801 715 GRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTV----SYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT 790 (879)
Q Consensus 715 ~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V----~~i~fs~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~ 790 (879)
+.++++++.|+.|++||+++++. +..+.+|..++ .++.|.++.+|++++.|+.|++||+.++ +++..+.
T Consensus 218 ~~~l~s~~~d~~i~iwd~~~~~~-~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~------~~~~~~~ 290 (325)
T d1pgua1 218 GEFVITVGSDRKISCFDGKSGEF-LKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS------KCVQKWT 290 (325)
T ss_dssp CCEEEEEETTCCEEEEETTTCCE-EEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTT------EEEEEEE
T ss_pred CEECCCCCCCCCEEEEEECCCCC-CCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCEEEEEECCCC------CEEEEEE
T ss_conf 10000112332101343001222-1111111111111000000368999999958993999999999------7889999
Q ss_pred CCCCC--EEEEEEECC-CCEEEEEECCCCEEEEEC
Q ss_conf 87886--799999319-999999929991999825
Q 002801 791 GHTNV--KNFVGLSVW-DGYVATGSETNEVFVYHK 822 (879)
Q Consensus 791 ~h~~~--v~~v~~sp~-~~~lasgs~Dg~v~iw~~ 822 (879)
.|... +..+++.+. +.+|++||.|+.|++|++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 291 LDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp CCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred ECCCCCCCEEEEEEECCCCEEEEEECCCEEEEEEC
T ss_conf 54874067699999889999999979999999979
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.2e-37 Score=230.23 Aligned_cols=278 Identities=17% Similarity=0.289 Sum_probs=214.4
Q ss_pred CCCCCCCCCE-EEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCC
Q ss_conf 5345899988-999993899999999589929999548644767641134177235898138998178999699960798
Q 002801 562 GDLLNSSNLV-CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 640 (879)
Q Consensus 562 ~~l~~h~~~V-~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg 640 (879)
..|.||.+.| +|++| ++++||||+.|++|+|||+.+... ......|...|.+++|++ ++.|++++.||
T Consensus 6 ~tL~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~~~-------~~~l~~H~~~V~~l~~s~--~~~l~s~s~D~ 74 (355)
T d1nexb2 6 TTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKF-------LLQLSGHDGGVWALKYAH--GGILVSGSTDR 74 (355)
T ss_dssp EEEECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTTEE-------EEEEECCSSCEEEEEEET--TTEEEEEETTC
T ss_pred EEECCCCCCCEEEEEE--CCCEEEEEECCCEEEEEECCCCCE-------EEEEECCCCCEEEEEECC--CCEEEEEECCC
T ss_conf 8889837886999998--899999991899099998999939-------999978999889999869--99999996452
Q ss_pred CEEEEECCCCEEEEEECCCC--CCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECC----------------
Q ss_conf 29999868872889812478--749999980399999999949994999969999148899539----------------
Q 002801 641 VVQVWDVSRSQVLTEMREHE--RRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTK---------------- 702 (879)
Q Consensus 641 ~V~iwd~~t~~~~~~~~~h~--~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~~---------------- 702 (879)
.|++|+....+......... ..+....+.+ ++..+++++.|+.|++||+.+...+......
T Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (355)
T d1nexb2 75 TVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYK-NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 153 (355)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEEEET-TEEEEEEEETTSEEEEEECCC-----------CCCEEESCTTTCTTE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCEEEEECCCCCEEEEECCCCCEECCCCCCCEECCCEECCCCCCCE
T ss_conf 44321111111111110011111111111112-32204554388868999856773001246520001000001123401
Q ss_pred ------CCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECC
Q ss_conf ------96699996289997999996799199998579960069981578878999974-99889999769909999569
Q 002801 703 ------ANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLS 775 (879)
Q Consensus 703 ------~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~ 775 (879)
.......+.++ +++++++..|+.|++||+++.+. +....++...+.++.|+ ++..+++++.|+.|++||+.
T Consensus 154 ~~~~~~~~~~v~~~~~~-~~~~~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~i~d~~ 231 (355)
T d1nexb2 154 VGVLRGHMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKC-LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 231 (355)
T ss_dssp EEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEE-EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred EEEEEECCCCCCCCCCC-CCEEEEECCCCEEEEEECCCCCC-EEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEECC
T ss_conf 21011002221000025-63344211442044430131100-01100012332111111210021012456368763012
Q ss_pred CCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEE-E
Q ss_conf 996455687607971878867999993199999999299919998259999720003479999999987878997999-9
Q 002801 776 MCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISS-V 854 (879)
Q Consensus 776 ~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-v 854 (879)
++ .++..+.+|...++++.++ +.+|++|+.|+.|++|++.......... ...+.+ .
T Consensus 232 ~~------~~~~~~~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~---------------~~~~~~~~ 288 (355)
T d1nexb2 232 NG------ELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH---------------HTNLSAIT 288 (355)
T ss_dssp TC------CEEEEECCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCCEEEEEE---------------CTTCCCCC
T ss_pred CC------CCCCCCCCCCCCCCCCCCC--CCEEEEEECCCCCCCCCCCCCCEECCCC---------------CCCCEEEE
T ss_conf 21------1111111111111111232--1003332011111111111111000124---------------68822999
Q ss_pred EEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 990799939999937984999991
Q 002801 855 CWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 855 ~~~p~~~~~l~s~~~Dg~I~iw~l 878 (879)
++.+++. + +++++||.|++|++
T Consensus 289 ~~~~~~~-~-l~~g~d~~i~vwd~ 310 (355)
T d1nexb2 289 TFYVSDN-I-LVSGSENQFNIYNL 310 (355)
T ss_dssp EEEECSS-E-EEEEETTEEEEEET
T ss_pred EECCCCC-E-EEEEECCEEEEEEC
T ss_conf 9849998-9-99980997999999
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.7e-37 Score=233.37 Aligned_cols=293 Identities=11% Similarity=0.030 Sum_probs=217.6
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEE
Q ss_conf 58999889999938999999995899299995486447676411341772358981389981789996999607982999
Q 002801 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (879)
Q Consensus 565 ~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~i 644 (879)
.+|.+.|++|+|+|++++||+|+.|++|+||++..... .........|...|.|++|++..+..|++|+.||.|.+
T Consensus 8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~----~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~ 83 (342)
T d1yfqa_ 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK----NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT----EEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCCCC----CEEEEEECCCCCCEEEEEEECCCCCEEEECCCCCCEEE
T ss_conf 89989788899958999999997999299997569986----36898855899988999995899978998126531145
Q ss_pred EECCCCEEEEEECCCCC-CEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE--C-----CCCEEEEEEECCCCC
Q ss_conf 98688728898124787-499999803999999999499949999699991488995--3-----996699996289997
Q 002801 645 WDVSRSQVLTEMREHER-RVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK--T-----KANVCCVQFPLDSGR 716 (879)
Q Consensus 645 wd~~t~~~~~~~~~h~~-~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~--~-----~~~v~~v~~~p~~~~ 716 (879)
|+............+.. ......+.+ +...+++++.|+.+++||+++........ . ........+.+. +.
T Consensus 84 w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 161 (342)
T d1yfqa_ 84 VDLIGSPSFQALTNNEANLGICRICKY-GDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN-SS 161 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEE-TTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC-SS
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEEEECC-CC
T ss_conf 420443200000111111111111111-1111111012221110202344433023000243001200000100016-87
Q ss_pred EEEEEECCCEEEEEECCCCCE--EEEEECCCCCCEEEEEEC--CCCEEEEEECCCCEEEEECCCCCCCCCCCCEE-----
Q ss_conf 999996799199998579960--069981578878999974--99889999769909999569996455687607-----
Q 002801 717 SLAFGSADHRIYYYDLRNSKI--PLCTLIGHNKTVSYVKFV--DATTLVSASTDNTLKLWDLSMCTSRVIDTPLH----- 787 (879)
Q Consensus 717 ~l~tgs~D~~I~iwDl~~~~~--~~~~~~~h~~~V~~i~fs--~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~----- 787 (879)
.+++++.|+.|++||++.... .......+...+.+..+. ++..+++++.|+.+.+|+..............
T Consensus 162 ~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T d1yfqa_ 162 RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred CEEEECCCCCEEEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCEEEEE
T ss_conf 02465179847887605676341112102542210146763699987886548995999980598640111235125655
Q ss_pred ----EEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE
Q ss_conf ----9718788679999931999999992999199982599997200034799999999878789979999990799939
Q 002801 788 ----SFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNT 863 (879)
Q Consensus 788 ----~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 863 (879)
...+|...+++++|+|++.+||+|+.||.|++||+..++.+..+.. ...+..++|+|++. +
T Consensus 242 ~~~~~~~~~~~~v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~--------------~~~~~~~~~s~~~~-~ 306 (342)
T d1yfqa_ 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK--------------FNEDSVVKIACSDN-I 306 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC--------------CSSSEEEEEEECSS-E
T ss_pred EECCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECC--------------CCCCEEEEEEECCC-E
T ss_conf 53147776235431599669844799987999899999998949887058--------------99987999994799-9
Q ss_pred EEEEECCCCEEEEEE
Q ss_conf 999937984999991
Q 002801 864 LVAANSSGNIKILEM 878 (879)
Q Consensus 864 l~s~~~Dg~I~iw~l 878 (879)
|++|++|+.+++|..
T Consensus 307 l~~a~sdd~~~~~~~ 321 (342)
T d1yfqa_ 307 LCLATSDDTFKTNAA 321 (342)
T ss_dssp EEEEEECTHHHHCSS
T ss_pred EEEEECCCCEEEEEE
T ss_conf 999991992788301
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-35 Score=218.64 Aligned_cols=287 Identities=17% Similarity=0.314 Sum_probs=228.6
Q ss_pred EEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEEC
Q ss_conf 85047579787213534589998899999389999999958992999954864476764113417723589813899817
Q 002801 548 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 627 (879)
Q Consensus 548 w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~ 627 (879)
|+..+.+..+.|+ ||.+.|.+ +++++|++||||+.||+|+|||+.+.... .....|...|.+++|++
T Consensus 1 W~~~~~~~~~~l~-----GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~-------~~~~~h~~~V~~v~~~~ 67 (342)
T d2ovrb2 1 WRRGELKSPKVLK-----GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL-------RTLVGHTGGVWSSQMRD 67 (342)
T ss_dssp HHHSCCCCCEEEE-----CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEE-------EECCCCSSCEEEEEEET
T ss_pred CCCCCCCCCEEEC-----CCCCCEEE-EEEECCCEEEEEECCCEEEEEECCCCCEE-------EEEECCCCCEEEEEECC
T ss_conf 9899887588988-----86875099-99978999999918990999989999799-------99948899989999479
Q ss_pred CCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEECCCCEEE
Q ss_conf 89996999607982999986887288981247874999998039999999994999499996999914889953996699
Q 002801 628 YIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANVCC 707 (879)
Q Consensus 628 ~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~~~~v~~ 707 (879)
+.|++++.|+.+++|+............+...+...... +..++.+..|+.+.+|+..+++....+........
T Consensus 68 ---~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~ 141 (342)
T d2ovrb2 68 ---NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 141 (342)
T ss_dssp ---TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE
T ss_pred ---CCCCCCEECCCCCCCCCCCCCCEECCCCCCEEEEEEECC---CCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCE
T ss_conf ---863210000011111111000000012333047652024---65221234440378740355630011100111100
Q ss_pred EEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEE
Q ss_conf 99628999799999679919999857996006998157887899997499889999769909999569996455687607
Q 002801 708 VQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLH 787 (879)
Q Consensus 708 v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~ 787 (879)
.... . ...+++++.|+.|++||++... .+..+.+|...+....+ ++..+++++.|+.|++||++.. .++.
T Consensus 142 ~~~~-~-~~~~~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~s~~~dg~i~~~d~~~~------~~~~ 211 (342)
T d2ovrb2 142 CVQY-D-GRRVVSGAYDFMVKVWDPETET-CLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETG------NCIH 211 (342)
T ss_dssp EEEE-C-SSCEEEEETTSCEEEEEGGGTE-EEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTC------CEEE
T ss_pred EECC-C-CCEEEEECCCCEEEEEECCCCE-EEEEECCCCCCCCCCCC-CCCEEEEEECCCEEEEEECCCC------EEEE
T ss_conf 0001-3-3302433589869995252343-66787275444210068-9999999958993999525565------3656
Q ss_pred EEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 97187886799999319999999929991999825999972000347999999998787899799999907999399999
Q 002801 788 SFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAA 867 (879)
Q Consensus 788 ~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~ 867 (879)
.+.+|...+.++.++ +.+|++|+.|+.|++|+....+....+... ..|...+.++.|+ +. ++++|
T Consensus 212 ~~~~~~~~v~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~----------~~~~~~~~~~~~~--~~-~~~s~ 276 (342)
T d2ovrb2 212 TLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGP----------NKHQSAVTCLQFN--KN-FVITS 276 (342)
T ss_dssp EECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECST----------TSCSSCEEEEEEC--SS-EEEEE
T ss_pred EECCCCCCEEEEECC--CCEEEEECCCCEEEEEECCCCCCCCCCCCC----------CEEEECEEECCCC--CC-EEEEE
T ss_conf 741665320577068--999999748988999865544221112210----------0011010000137--98-44999
Q ss_pred ECCCCEEEEEE
Q ss_conf 37984999991
Q 002801 868 NSSGNIKILEM 878 (879)
Q Consensus 868 ~~Dg~I~iw~l 878 (879)
+.||.|++|++
T Consensus 277 s~Dg~i~iwd~ 287 (342)
T d2ovrb2 277 SDDGTVKLWDL 287 (342)
T ss_dssp ETTSEEEEEET
T ss_pred CCCCEEEEEEC
T ss_conf 08998999999
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-41 Score=256.82 Aligned_cols=226 Identities=13% Similarity=0.099 Sum_probs=159.3
Q ss_pred CCCCCCCCCCCCC-CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC--CCCEEEEEEECCCCHHHHHCCCCCCCCHHH
Q ss_conf 5542310258999-8322223573442046545678987763444344--575288876088533453069999878568
Q 002801 7 RGERFGVRGDDSN-DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAA--IDPFVHAIEWGDVSLRQWLDKPKRSVDVYE 83 (879)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~ 83 (879)
+|..++++-.... ...+..|.+...+...+|+|++.+++ +|.++.. ..+|+||||+.+|+|.++|++. .+++..
T Consensus 25 ~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~-~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~l~~~~ 101 (303)
T d1vjya_ 25 RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIA-ADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEG 101 (303)
T ss_dssp TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEE-EEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHH
T ss_pred CCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEEE-EEEECCCCCEEEEEEEECCCCCCHHHHHHCC--CCCHHH
T ss_conf 9989999998720046799999999996279986832688-9983798604899999646698989998658--999899
Q ss_pred HHHHHHHHHHHHHHHHH--------CCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999999999985210--------3711036788623424478724530665569899986666545654446889999
Q 002801 84 CLHIFRQIVEIVYAAHS--------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 155 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs--------~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (879)
.+.++.|++.||.|+|+ +||+||||||+|||++..+.+|++|||+++........
T Consensus 102 ~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~----------------- 164 (303)
T d1vjya_ 102 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT----------------- 164 (303)
T ss_dssp HHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCC-----------------
T ss_conf 999999999999998876652046898661531731357868877688763866234677762-----------------
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 61122424301223543324787654334233356655750000135332222333321000012357988431013345
Q 002801 156 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 235 (879)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 235 (879)
........+||
T Consensus 165 ---------------------------------------------------------------------~~~~~~~~~gt 175 (303)
T d1vjya_ 165 ---------------------------------------------------------------------IDIAPNHRVGT 175 (303)
T ss_dssp ---------------------------------------------------------------------ECC----CCSC
T ss_pred ---------------------------------------------------------------------EECCCCCEECC
T ss_conf ---------------------------------------------------------------------00135525035
Q ss_pred CCEECCCCCCCCC------CCCCCCCHHHHHHHHHHHC---CCCCCHHH--------------HHHHHH-HCCCCCCCH-
Q ss_conf 6200441326999------8865860048999999625---89998155--------------768763-024579902-
Q 002801 236 NWYASPEELAGAP------VSCASDIYRLGVLLFELFC---PFSTGEEK--------------TRTMSS-LRHRVLPPQ- 290 (879)
Q Consensus 236 ~~Y~aPE~~~~~~------~s~~sDIySlGvil~el~~---pf~~~~~~--------------~~~~~~-l~~~~~~~~- 290 (879)
+.|+|||++.+.. ++.++|||||||+||||++ ||...... ...... ......|+.
T Consensus 176 ~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 255 (303)
T d1vjya_ 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIP 255 (303)
T ss_dssp GGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf 47678221056545467776750122015999999962899887663112410122556430999999875024688877
Q ss_pred --HH--CCCHHHHHHHHHHCCCCCCCCCCHHHHHH
Q ss_conf --22--03914689999704999999999889861
Q 002801 291 --LL--LKFPKEASFCLWLLHPEPSGRPKMGELLQ 321 (879)
Q Consensus 291 --~~--~~~~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (879)
+. .....+.+|+.+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 256 NRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp GGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHH
T ss_conf 65577689999999999976069858959999999
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.8e-40 Score=250.27 Aligned_cols=222 Identities=13% Similarity=0.066 Sum_probs=168.9
Q ss_pred CCCCCCCCCCCCCC-----CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCC--------
Q ss_conf 54231025899983-----22223573442046545678987763444344575288876088533453069--------
Q 002801 8 GERFGVRGDDSNDF-----ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-------- 74 (879)
Q Consensus 8 ~~~~~~~~~~~~~~-----~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~-------- 74 (879)
+..++|+-...... .|.+|.. .+.+.+|+|++.+++ +|.++ ...|+||||+.+|+|.+++..
T Consensus 50 ~~~VAvK~~~~~~~~~~~~~~~~E~~--il~~l~h~nIv~~~~-~~~~~--~~~~lv~e~~~~g~l~~~~~~~~~~~~~~ 124 (308)
T d1p4oa_ 50 ETRVAIKTVNEAASMRERIEFLNEAS--VMKEFNCHHVVRLLG-VVSQG--QPTLVIMELMTRGDLKSYLRSLRPAMANN 124 (308)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHH--HGGGCCCTTBCCEEE-EECSS--SSCEEEEECCTTCBHHHHHHHHHHHHHHC
T ss_pred CCEEEEEEECCCCCHHHHHHHHHHHH--HHHHCCCCCEEEEEE-EEECC--CCEEEEEEECCCCCHHHHHHHCCCCCCCC
T ss_conf 96899999870128689999999999--999769998841254-78428--81067776048998899987503321134
Q ss_pred -CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf -9998785688999999999998521037110367886234244787245306655698999866665456544468899
Q 002801 75 -PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 153 (879)
Q Consensus 75 -~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (879)
....+++..+..|+.|++.||.|||+++|+||||||+|||++..+.+|++|||+++........
T Consensus 125 ~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~--------------- 189 (308)
T d1p4oa_ 125 PVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY--------------- 189 (308)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE---------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECEECCCCEEECCCCEEEEEECCCCEECCCCCCE---------------
T ss_conf 44688799999999999999999876479654328677540359964999424542023577630---------------
Q ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
Q ss_conf 99611224243012235433247876543342333566557500001353322223333210000123579884310133
Q 002801 154 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLM 233 (879)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (879)
...+...
T Consensus 190 -------------------------------------------------------------------------~~~~~~~ 196 (308)
T d1p4oa_ 190 -------------------------------------------------------------------------RKGGKGL 196 (308)
T ss_dssp -------------------------------------------------------------------------EGGGSSE
T ss_pred -------------------------------------------------------------------------EECCCEE
T ss_conf -------------------------------------------------------------------------3134023
Q ss_pred CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHCCCCC
Q ss_conf 4562004413269998865860048999999625---8999815576876302457990222039146899997049999
Q 002801 234 ETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEP 310 (879)
Q Consensus 234 gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (879)
||+.|+|||.+.+..++.++|||||||+||||++ +++...........+.....++.+...++.+.+++.+||+.+|
T Consensus 197 ~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P 276 (308)
T d1p4oa_ 197 LPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNP 276 (308)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred CCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCH
T ss_conf 16323788887369988333444378999999968999999989999999998088888863353999999999757796
Q ss_pred CCCCCHHHHHHC
Q ss_conf 999998898615
Q 002801 311 SGRPKMGELLQS 322 (879)
Q Consensus 311 ~~Rpt~~eil~~ 322 (879)
.+|||+.+++++
T Consensus 277 ~~RPs~~~il~~ 288 (308)
T d1p4oa_ 277 KMRPSFLEIISS 288 (308)
T ss_dssp GGSCCHHHHHHH
T ss_pred HHCCCHHHHHHH
T ss_conf 589399999999
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.8e-36 Score=225.99 Aligned_cols=308 Identities=13% Similarity=0.198 Sum_probs=215.7
Q ss_pred CCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEE------EECCCCCEEEEEE
Q ss_conf 4589998899999389999999958992999954864476764113417723589813899------8178999699960
Q 002801 564 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC------WNSYIKSQIASSN 637 (879)
Q Consensus 564 l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~------~~~~~~~~l~s~~ 637 (879)
..+|.+.|+++++++ ++++||+.|++|+||+.......... ........+...+..+. .+......+++++
T Consensus 10 ~~~H~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 86 (393)
T d1sq9a_ 10 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPK-DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 86 (393)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGG-GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred CCCCCCCCEEEEEEC--CEEEEEECCCEEEEEECCCCCCCCCC-CEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEE
T ss_conf 876367127999969--99999979996998789878877654-046765420477167666750015799876899994
Q ss_pred CCCCEEEEECCCCEE----E-EEE-----CCCCCCEEEEEEECCC----CCEEEEEECCCCEEEEECCCC----------
Q ss_conf 798299998688728----8-981-----2478749999980399----999999949994999969999----------
Q 002801 638 FEGVVQVWDVSRSQV----L-TEM-----REHERRVWSIDFSSAD----PTLLASGSDDGSVKLWSINQG---------- 693 (879)
Q Consensus 638 ~dg~V~iwd~~t~~~----~-~~~-----~~h~~~V~si~fsp~~----~~~lasgs~Dg~V~iwD~~~~---------- 693 (879)
.||.|++|++..... . ... ..+...++.+.+.+.. +.++++++.|+++++|++...
T Consensus 87 ~dg~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~ 166 (393)
T d1sq9a_ 87 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 166 (393)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCCEEEEECCCCCCEEEEECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEE
T ss_conf 89919999822898205651245632431157896689998447886542179998389819998740477534102331
Q ss_pred -CE---E-EEEE----CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEE------EECCCCCCEEEEEEC-CC
Q ss_conf -14---8-8995----3996699996289997999996799199998579960069------981578878999974-99
Q 002801 694 -VS---I-GTIK----TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLC------TLIGHNKTVSYVKFV-DA 757 (879)
Q Consensus 694 -~~---i-~~~~----~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~------~~~~h~~~V~~i~fs-~~ 757 (879)
.. + .... ....+.+++|+|+ + ++++|+.|+.|++||+.+.+. +. .+.+|..+|+++.|+ ++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-g-~lasgs~Dg~i~iwd~~~~~~-~~~~~~~~~l~~h~~~V~~l~~spdg 243 (393)
T d1sq9a_ 167 WSPTLELQGTVESPMTPSQFATSVDISER-G-LIATGFNNGTVQISELSTLRP-LYNFESQHSMINNSNSIRSVKFSPQG 243 (393)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEECTT-S-EEEEECTTSEEEEEETTTTEE-EEEEECCC---CCCCCEEEEEECSST
T ss_pred ECCCEECCCCEECCCCCCCCEEEEEECCC-C-EEEEEECCCCEEEEEECCCCC-CCCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 03200014510002578986789997899-9-899993898299986023321-10000111112425638770046653
Q ss_pred CEEEEEECCCC---EEEEECCCCCCC-------CCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 88999976990---999956999645-------56876079718788679999931999999992999199982599997
Q 002801 758 TTLVSASTDNT---LKLWDLSMCTSR-------VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMP 827 (879)
Q Consensus 758 ~~l~sgs~D~~---i~iwd~~~~~~~-------~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~ 827 (879)
++|++|+.|++ |++||+..+... ........+.+|.+.|++++|+|++++|++||.|++|++||+..++.
T Consensus 244 ~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~ 323 (393)
T d1sq9a_ 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 323 (393)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred CEEEEECCCCCCCEEEECCCCCCEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCCCCE
T ss_conf 20112428988421001035321344431156666431023202358666001389888069877999899999999979
Q ss_pred CEECCCCCCCCCCC----CCC-----CCCCCCEEEEEEECCCC---------CEEEEEECCCCEEEEEE
Q ss_conf 20003479999999----987-----87899799999907999---------39999937984999991
Q 002801 828 ALSFNFNHADPLSG----PET-----DDAAQFISSVCWRGQSS---------NTLVAANSSGNIKILEM 878 (879)
Q Consensus 828 ~~~~~~~~~~~~~~----~~~-----~~h~~~V~~v~~~p~~~---------~~l~s~~~Dg~I~iw~l 878 (879)
+..++ +|.+.+.. ..+ ......+.++.|.+++. ..+++++.|+.|++|.-
T Consensus 324 ~~~l~-gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ir~~~~ 391 (393)
T d1sq9a_ 324 ITTLN-MHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFRE 391 (393)
T ss_dssp EEEEE-CCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEE
T ss_pred EEEEC-CCCCCCCCCCCEEEECCCCCEEEECCCCEEEECCCCCEECCCCCCCCEEEEEECCCEEEEEEC
T ss_conf 99998-868761377348999999999998312469988667663123688997999991990899908
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.3e-39 Score=247.14 Aligned_cols=232 Identities=16% Similarity=0.107 Sum_probs=157.0
Q ss_pred CCCCCCCCCCC--CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHH
Q ss_conf 55542310258--9998322223573442046545678987763444344575288876088533453069999878568
Q 002801 6 LRGERFGVRGD--DSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYE 83 (879)
Q Consensus 6 ~~~~~~~~~~~--~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~ 83 (879)
..|+.++++-. ......+..|.+. +....|++++..+. .|.. .....|+|||++ +++|.+.+....+.+++..
T Consensus 30 ~~~~~vAvK~~~~~~~~~~~~~E~~i--~~~l~~~~~i~~~~-~~~~-~~~~~~ivme~~-~~~l~~~~~~~~~~~~~~~ 104 (299)
T d1ckia_ 30 AAGEEVAIKLECVKTKHPQLHIESKI--YKMMQGGVGIPTIR-WCGA-EGDYNVMVMELL-GPSLEDLFNFCSRKFSLKT 104 (299)
T ss_dssp TTTEEEEEEEEESCTTSCCHHHHHHH--HHHSTTSTTCCCEE-EEEE-ETTEEEEEEECC-CCBHHHHHHHTTTCCCHHH
T ss_pred CCCCEEEEEEECHHCCCHHHHHHHHH--HHHCCCCCCCCEEE-EEEE-CCCEEEEEEEEC-CCCHHHHHHHCCCCCCHHH
T ss_conf 89989999997210058889999999--99703899601799-9995-198778999873-8713332443068876899
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC---CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 8999999999998521037110367886234244---7872453066556989998666654565444688999961122
Q 002801 84 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 160 (879)
Q Consensus 84 ~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~---~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (879)
++.++.|++.||.|+|++||+||||||+|||+.. ...+|++|||+++..........
T Consensus 105 ~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~-------------------- 164 (299)
T d1ckia_ 105 VLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH-------------------- 164 (299)
T ss_dssp HHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB--------------------
T ss_pred HHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCEEEEECCCCCEECCCCCCCCC--------------------
T ss_conf 999999999999999979944266787660643357776156504675134255445541--------------------
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 42430122354332478765433423335665575000013533222233332100001235798843101334562004
Q 002801 161 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 240 (879)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 240 (879)
.........+||+.|+|
T Consensus 165 ---------------------------------------------------------------~~~~~~~~~~gt~~y~a 181 (299)
T d1ckia_ 165 ---------------------------------------------------------------IPYRENKNLTGTARYAS 181 (299)
T ss_dssp ---------------------------------------------------------------CCCCBCCSCCCCSSSCC
T ss_pred ---------------------------------------------------------------EECCCCCCCCCCCCCCC
T ss_conf ---------------------------------------------------------------00013577678735329
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHHHHHHHH--H-CC--CCC-CCHHHCCCHHHHHHHHHHCCCCCC
Q ss_conf 413269998865860048999999625---89998155768763--0-24--579-902220391468999970499999
Q 002801 241 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSS--L-RH--RVL-PPQLLLKFPKEASFCLWLLHPEPS 311 (879)
Q Consensus 241 PE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~~~~~~~--l-~~--~~~-~~~~~~~~~~~~~li~~~L~~dP~ 311 (879)
||++.+.+|+.++|||||||++|||++ ||............ . .. ... +......++++.+|+..||..+|.
T Consensus 182 PE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~ 261 (299)
T d1ckia_ 182 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFD 261 (299)
T ss_dssp HHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTT
T ss_pred HHHHHCCCCCCHHHEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHH
T ss_conf 99991899898321886177899998498766553057799999985235678983575347889999999998439955
Q ss_pred CCCCHHHH---HHCCCC
Q ss_conf 99998898---615234
Q 002801 312 GRPKMGEL---LQSEFL 325 (879)
Q Consensus 312 ~Rpt~~ei---l~~~~l 325 (879)
+||++.++ |+++|.
T Consensus 262 ~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 262 DKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp CCCCHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHH
T ss_conf 79199999999999999
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-34 Score=215.93 Aligned_cols=278 Identities=18% Similarity=0.308 Sum_probs=216.5
Q ss_pred CCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEE
Q ss_conf 58999889999938999999995899299995486447676411341772358981389981789996999607982999
Q 002801 565 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 644 (879)
Q Consensus 565 ~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~i 644 (879)
..|...|+|++| |+++||||+.||+|+|||+.+... ......|...|.+++|+ +++|++++.||.|.+
T Consensus 12 ~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~-------~~~l~~H~~~V~~v~~~---~~~l~s~s~D~~i~~ 79 (293)
T d1p22a2 12 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLEC-------KRILTGHTGSVLCLQYD---ERVIITGSSDSTVRV 79 (293)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCE-------EEEECCCSSCEEEEECC---SSEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEE--CCCEEEEEECCCEEEEEECCCCCE-------EEEEECCCCCEEEEECC---CCEEECCCCCCCCCC
T ss_conf 899998899987--699999992899399999999919-------99992677877634236---300210011101100
Q ss_pred EECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEE---E-CCCCEEEEEEECCCCCEEEE
Q ss_conf 9868872889812478749999980399999999949994999969999148899---5-39966999962899979999
Q 002801 645 WDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTI---K-TKANVCCVQFPLDSGRSLAF 720 (879)
Q Consensus 645 wd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~---~-~~~~v~~v~~~p~~~~~l~t 720 (879)
|++..+........+...... +.+ ....++++..++.+.+|+.......... . +...+.++.+.+ ..+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~ 153 (293)
T d1p22a2 80 WDVNTGEMLNTLIHHCEAVLH--LRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVS 153 (293)
T ss_dssp EESSSCCEEEEECCCCSCEEE--EEC-CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET---TEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCC--CCC-CCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECC---CCCCC
T ss_conf 000246410011111100001--111-110000013566306861344544421210001135431100000---22011
Q ss_pred EECCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEE
Q ss_conf 96799199998579960069981578878999974998899997699099995699964556876079718788679999
Q 002801 721 GSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVG 800 (879)
Q Consensus 721 gs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~ 800 (879)
++.|+.+++||+++.+. +..+.++...+..+.+. +..+++++.|+.|++||+++. ..+..+.+|...+..
T Consensus 154 ~s~d~~i~~~d~~~~~~-~~~~~~~~~~v~~~~~~-~~~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~v~~-- 223 (293)
T d1p22a2 154 ASGDRTIKVWNTSTCEF-VRTLNGHKRGIACLQYR-DRLVVSGSSDNTIRLWDIECG------ACLRVLEGHEELVRC-- 223 (293)
T ss_dssp EETTSEEEEEETTTCCE-EEEEECCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTC------CEEEEECCCSSCEEE--
T ss_pred CCCCCCEEEECCCCCCE-EEEECCCCCCCCCCCCC-CCEEEEECCCCEEEEEECCCC------EEEEEECCCCEEEEE--
T ss_conf 06998604100788838-89971554453221689-875887658998999866556------146652143100000--
Q ss_pred EECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 93199999999299919998259999720003479999999987878997999999079993999993798499999
Q 002801 801 LSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 801 ~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw~ 877 (879)
+++++.+|++|+.||.|++|++........... ...-....+|.+.|.+++|+ +. +|++++.||+|++||
T Consensus 224 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~~H~~~V~~v~~d--~~-~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 224 IRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAG----TLCLRTLVEHSGRVFRLQFD--EF-QIVSSSHDDTILIWD 293 (293)
T ss_dssp EECCSSEEEEEETTSCEEEEEHHHHTSTTSCTT----TTEEEEECCCSSCCCCEEEC--SS-CEEECCSSSEEEEEC
T ss_pred CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCC----CEEEEEECCCCCCEEEEEEC--CC-EEEEEECCCEEEEEC
T ss_conf 145410799986799799998888864445677----54557845889988999971--99-999992299899959
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=1.5e-38 Score=240.88 Aligned_cols=227 Identities=14% Similarity=0.114 Sum_probs=157.2
Q ss_pred CCCCCCCCCCC--CCCCCCCCCC-CCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHH
Q ss_conf 55542310258--9998322223-57344204654567898776344434457528887608853345306999987856
Q 002801 6 LRGERFGVRGD--DSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVY 82 (879)
Q Consensus 6 ~~~~~~~~~~~--~~~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~ 82 (879)
..|+.++++-. ......++.| +....+.+++|++.+..++ +.....|+|||++ |++|.++++..+..+++.
T Consensus 28 ~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~-----~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~ 101 (293)
T d1csna_ 28 LNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG-----QEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVK 101 (293)
T ss_dssp TTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEE-----EETTEEEEEEECC-CCBHHHHHHHTTTCCCHH
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE-----ECCCCCEEEEEEC-CCCHHHHHHHHCCCHHHH
T ss_conf 8997999999750258299999999999964899987799996-----0188117999964-888799997520311068
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECC-----CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88999999999998521037110367886234244-----7872453066556989998666654565444688999961
Q 002801 83 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS-----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 157 (879)
Q Consensus 83 ~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~-----~~~vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (879)
.+..++.|++.||.|+|++||+||||||+||+++. .+.+|++|||+++...........
T Consensus 102 ~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~---------------- 165 (293)
T d1csna_ 102 TVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI---------------- 165 (293)
T ss_dssp HHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC----------------
T ss_pred HHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCCCCCCCCEEECCCCEEEECCCCCCCCCE----------------
T ss_conf 9999999999999999977966266771315234754344795687236605771467665411----------------
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12242430122354332478765433423335665575000013533222233332100001235798843101334562
Q 002801 158 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 237 (879)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 237 (879)
........+||+.
T Consensus 166 -------------------------------------------------------------------~~~~~~~~~GT~~ 178 (293)
T d1csna_ 166 -------------------------------------------------------------------PYREKKNLSGTAR 178 (293)
T ss_dssp -------------------------------------------------------------------CCCCCCCCCSCTT
T ss_pred -------------------------------------------------------------------EECCCCCEEECHH
T ss_conf -------------------------------------------------------------------1024676277510
Q ss_pred EECCCCCCCCCCCCCCCCHHHHHHHHHHHC---CCCCCHHH--HHHHHHH---CCCCCCC-HHHCCCHHHHHHHHHHCCC
Q ss_conf 004413269998865860048999999625---89998155--7687630---2457990-2220391468999970499
Q 002801 238 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEK--TRTMSSL---RHRVLPP-QLLLKFPKEASFCLWLLHP 308 (879)
Q Consensus 238 Y~aPE~~~~~~~s~~sDIySlGvil~el~~---pf~~~~~~--~~~~~~l---~~~~~~~-~~~~~~~~~~~li~~~L~~ 308 (879)
|||||++.+..++.++|||||||++|||++ ||...... ......+ .....++ .....++++..++..|+..
T Consensus 179 y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~ 258 (293)
T d1csna_ 179 YMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNL 258 (293)
T ss_dssp TCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHC
T ss_pred HCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHCC
T ss_conf 26798964888886999898319999998698767885302199999999705679995896579989999999998439
Q ss_pred CCCCCCCHHHHHH
Q ss_conf 9999999889861
Q 002801 309 EPSGRPKMGELLQ 321 (879)
Q Consensus 309 dP~~Rpt~~eil~ 321 (879)
+|.+||++..+.+
T Consensus 259 ~~~~rP~y~~l~~ 271 (293)
T d1csna_ 259 AFDATPDYDYLQG 271 (293)
T ss_dssp CTTCCCCHHHHHH
T ss_pred CCCCCCCHHHHHH
T ss_conf 9300859999999
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-32 Score=202.76 Aligned_cols=261 Identities=18% Similarity=0.334 Sum_probs=207.7
Q ss_pred CCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 71240444681689850475797872135345899988999993899999999589929999548644767641134177
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 534 ~~~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
..+++++.|+.+++|+..+.++...+. +|.+.|++++| ++++|++|+.|+.|++|++...... ..
T Consensus 26 ~~l~sgs~Dg~i~vWd~~~~~~~~~l~-----~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~--------~~ 90 (293)
T d1p22a2 26 QKIVSGLRDNTIKIWDKNTLECKRILT-----GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML--------NT 90 (293)
T ss_dssp SEEEEEESSSCEEEEESSSCCEEEEEC-----CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE--------EE
T ss_pred CEEEEEECCCEEEEEECCCCCEEEEEE-----CCCCCEEEEEC--CCCEEECCCCCCCCCCCCCCCCCCC--------CC
T ss_conf 999999289939999999991999992-----67787763423--6300210011101100000246410--------01
Q ss_pred ECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCE---EEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEC
Q ss_conf 23589813899817899969996079829999868872---889812478749999980399999999949994999969
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ---VLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSI 690 (879)
Q Consensus 614 ~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~---~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~ 690 (879)
.. ........+.. ....++++..++.+.+|+..+.. ....+..|...+..+.+.+ ..+++++.|+.|++||.
T Consensus 91 ~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~d~~i~~~d~ 165 (293)
T d1p22a2 91 LI-HHCEAVLHLRF-NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWNT 165 (293)
T ss_dssp EC-CCCSCEEEEEC-CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEET
T ss_pred CC-CCCCCCCCCCC-CCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEECC---CCCCCCCCCCCEEEECC
T ss_conf 11-11100001111-110000013566306861344544421210001135431100000---22011069986041007
Q ss_pred CCCCEEEEEEC-CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCE
Q ss_conf 99914889953-99669999628999799999679919999857996006998157887899997499889999769909
Q 002801 691 NQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTL 769 (879)
Q Consensus 691 ~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs~~~~l~sgs~D~~i 769 (879)
++++.+..+.. ...+..+.++ +..+++++.|+.|++||+++... +..+.+|...+....+ ++.+|++++.|+.|
T Consensus 166 ~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~v~~~~~-~~~~l~sg~~dg~i 240 (293)
T d1p22a2 166 STCEFVRTLNGHKRGIACLQYR---DRLVVSGSSDNTIRLWDIECGAC-LRVLEGHEELVRCIRF-DNKRIVSGAYDGKI 240 (293)
T ss_dssp TTCCEEEEEECCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCE-EEEECCCSSCEEEEEC-CSSEEEEEETTSCE
T ss_pred CCCCEEEEECCCCCCCCCCCCC---CCEEEEECCCCEEEEEECCCCEE-EEEECCCCEEEEECCC-CCEEEEEECCCCEE
T ss_conf 8883889971554453221689---87588765899899986655614-6652143100000145-41079998679979
Q ss_pred EEEECCCCCCC---CCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEE
Q ss_conf 99956999645---56876079718788679999931999999992999199982
Q 002801 770 KLWDLSMCTSR---VIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 770 ~iwd~~~~~~~---~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~ 821 (879)
++||+...... ....++..+.+|...|++++|+ +.+|++||.|+.|++||
T Consensus 241 ~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d--~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SSCEEECCSSSEEEEEC
T ss_pred EEEECCCCCCCCCCCCCEEEEEECCCCCCEEEEEEC--CCEEEEEECCCEEEEEC
T ss_conf 999888886444567754557845889988999971--99999992299899959
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.1e-37 Score=230.24 Aligned_cols=200 Identities=18% Similarity=0.182 Sum_probs=143.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHH--HCCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCCCCCCCCCC
Q ss_conf 545678987763444344575288876088533453--06999987856889999999999985210-371103678862
Q 002801 36 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQW--LDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSC 112 (879)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~--l~~~~~~~~~~~~~~i~~qi~~~l~~lHs-~givH~DlkP~N 112 (879)
.|++++.++. ++..+.....+++|+++........ .......+++..++.+++||+.||+|||+ +||+||||||+|
T Consensus 78 ~~~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~N 156 (362)
T d1q8ya_ 78 GANHILKLLD-HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN 156 (362)
T ss_dssp HHTTBCCCCE-EEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGG
T ss_pred CCCCEEEEEE-EEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 7676478998-763125652023432000354200000122346786899999999999998887640586465677057
Q ss_pred EEECCCCC------EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 34244787------245306655698999866665456544468899996112242430122354332478765433423
Q 002801 113 FVMSSFNH------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 186 (879)
Q Consensus 113 ill~~~~~------vk~~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (879)
||++..+. ++++|||.+......
T Consensus 157 Ill~~~~~~~~~~~~kl~dfg~s~~~~~~--------------------------------------------------- 185 (362)
T d1q8ya_ 157 VLMEIVDSPENLIQIKIADLGNACWYDEH--------------------------------------------------- 185 (362)
T ss_dssp EEEEEEETTTTEEEEEECCCTTCEETTBC---------------------------------------------------
T ss_pred EEEECCCCCCCCCEEEEEECCCCCCCCCC---------------------------------------------------
T ss_conf 05630576564430567531442123445---------------------------------------------------
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 33566557500001353322223333210000123579884310133456200441326999886586004899999962
Q 002801 187 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 266 (879)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDIySlGvil~el~ 266 (879)
....+||+.|+|||++.+..|+.++||||+||+++||+
T Consensus 186 ------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 223 (362)
T d1q8ya_ 186 ------------------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 223 (362)
T ss_dssp ------------------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf ------------------------------------------42236652105713214667776432012378999998
Q ss_pred C---CCCCCHHHHH------H---HHHHCC-----------------------C----C----------CCCHHHCCCHH
Q ss_conf 5---8999815576------8---763024-----------------------5----7----------99022203914
Q 002801 267 C---PFSTGEEKTR------T---MSSLRH-----------------------R----V----------LPPQLLLKFPK 297 (879)
Q Consensus 267 ~---pf~~~~~~~~------~---~~~l~~-----------------------~----~----------~~~~~~~~~~~ 297 (879)
+ ||........ . +..+.. . . ........++.
T Consensus 224 ~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (362)
T d1q8ya_ 224 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKE 303 (362)
T ss_dssp HSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHH
T ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHCCCCCCCCCCCCHH
T ss_conf 78899898755432102689999999837998788624532200013201220243235776444210001567435899
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 68999970499999999988986152345996
Q 002801 298 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 329 (879)
Q Consensus 298 ~~~li~~~L~~dP~~Rpt~~eil~~~~l~~~~ 329 (879)
+.+|+.+||..||.+|||+.|+|+||||+...
T Consensus 304 ~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~ 335 (362)
T d1q8ya_ 304 ISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 335 (362)
T ss_dssp HHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred HHHHHHHHCCCCHHHCCCHHHHHCCCCCCCCC
T ss_conf 99999998779945790899996693407898
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.4e-34 Score=214.33 Aligned_cols=269 Identities=15% Similarity=0.205 Sum_probs=193.1
Q ss_pred CCEECCCCCCCEEEEEECCCEEEEEEC-CCCCCCCCCCEEEE------EECC-CCCEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf 712404446816898504757978721-35345899988999------9938-999999995899299995486447676
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSL------SFDR-DGELFAAAGVNKKIKVFECDAIINENR 605 (879)
Q Consensus 534 ~~~l~~~~d~~i~~w~~~~~~~~~~l~-~~~l~~h~~~V~si------~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~ 605 (879)
..+++++.|+.+++|+..+........ ......|...+..+ ..+. ++.++++++.||.|++|++........
T Consensus 25 ~~l~S~S~D~~iriWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg~v~~w~~~~~~~~~~ 104 (393)
T d1sq9a_ 25 SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK 104 (393)
T ss_dssp SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC
T ss_pred CEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCEEEEEECCCCEEEEECCCCCCEEE
T ss_conf 99999979996998789878877654046765420477167666750015799876899994899199998228982056
Q ss_pred CCCC---CEEEECCCCCEEEEEEECCC----CCEEEEEECCCCEEEEECCCCE---------------E---EEEECCCC
Q ss_conf 4113---41772358981389981789----9969996079829999868872---------------8---89812478
Q 002801 606 DIHY---PVVEMASRSKLSSICWNSYI----KSQIASSNFEGVVQVWDVSRSQ---------------V---LTEMREHE 660 (879)
Q Consensus 606 ~~~~---~~~~~~~~~~I~~i~~~~~~----~~~l~s~~~dg~V~iwd~~t~~---------------~---~~~~~~h~ 660 (879)
.... ......+...+..++|.+.. ..++++++.||.+.+|++.... . ......+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T d1sq9a_ 105 VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPS 184 (393)
T ss_dssp EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSC
T ss_pred EECCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCEECCCCEECCCCCC
T ss_conf 51245632431157896689998447886542179998389819998740477534102331032000145100025789
Q ss_pred CCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEE-------CCCCEEEEEEECCCCCEEEEEECCC---EEEEE
Q ss_conf 7499999803999999999499949999699991488995-------3996699996289997999996799---19999
Q 002801 661 RRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIK-------TKANVCCVQFPLDSGRSLAFGSADH---RIYYY 730 (879)
Q Consensus 661 ~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~-------~~~~v~~v~~~p~~~~~l~tgs~D~---~I~iw 730 (879)
..+++++|+| ++ ++++|+.|++|++||+.+++++..+. +...|.+++|+|+ +++|++|+.|+ .|++|
T Consensus 185 ~~~~~v~~s~-dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~D~t~~~i~lw 261 (393)
T d1sq9a_ 185 QFATSVDISE-RG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHDSNSFGCITLY 261 (393)
T ss_dssp CCCCEEEECT-TS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEEETTEEEEEEE
T ss_pred CCEEEEEECC-CC-EEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCC-CCEEEEECCCCCCCEEEEC
T ss_conf 8678999789-99-8999938982999860233211000011111242563877004665-3201124289884210010
Q ss_pred ECCCCCEEEEEE-------------CCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCE
Q ss_conf 857996006998-------------1578878999974-99889999769909999569996455687607971878867
Q 002801 731 DLRNSKIPLCTL-------------IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK 796 (879)
Q Consensus 731 Dl~~~~~~~~~~-------------~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v 796 (879)
|+.++.. +..+ .+|...|+++.|+ ++++|+|++.|++|++||+.++ .++.++.+|...|
T Consensus 262 d~~~g~~-~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g------~~~~~l~gH~~~v 334 (393)
T d1sq9a_ 262 ETEFGER-IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK------ERITTLNMHCDDI 334 (393)
T ss_dssp ETTTCCE-EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTT------EEEEEEECCGGGC
T ss_pred CCCCCEE-EEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEEEECCCC------CEEEEECCCCCCC
T ss_conf 3532134-44311566664310232023586660013898880698779998999999999------7999998868761
Q ss_pred E----EEEEECCCCEEEEEE
Q ss_conf 9----999931999999992
Q 002801 797 N----FVGLSVWDGYVATGS 812 (879)
Q Consensus 797 ~----~v~~sp~~~~lasgs 812 (879)
. .++|++++..+++++
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~ 354 (393)
T d1sq9a_ 335 EIEEDILAVDEHGDSLAEPG 354 (393)
T ss_dssp SSGGGCCCBCTTSCBCSSCC
T ss_pred CCCCCEEEECCCCCEEEECC
T ss_conf 37734899999999999831
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.4e-31 Score=199.56 Aligned_cols=249 Identities=12% Similarity=0.136 Sum_probs=198.7
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEC
Q ss_conf 24044468168985047579787213534589998899999389999999958992999954864476764113417723
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 615 (879)
++++..||.+++|+..+.. .+|.+.|.++.|++++ .+++++.|++|++|++... .
T Consensus 24 l~sgs~Dg~v~~Wd~~~~~----------~~h~~~V~~~~~~~~~-~~~s~s~D~~v~~w~~~~~--------------~ 78 (287)
T d1pgua2 24 LISGSYDGRIMEWSSSSMH----------QDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKH--------------E 78 (287)
T ss_dssp TEEEETTSCEEETTTTEEE----------CCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEE--------------E
T ss_pred EEEEECCCEEEEEECCCCC----------CCCCCCEEEEEECCCC-EEEEEEECCCCCCCCCCCC--------------C
T ss_conf 7898489919999899988----------8877878999965997-2898861012221111111--------------1
Q ss_pred CCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCC-CEEEEECCCCC
Q ss_conf 58981389981789996999607982999986887288981247874999998039999999994999-49999699991
Q 002801 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDG-SVKLWSINQGV 694 (879)
Q Consensus 616 ~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg-~V~iwD~~~~~ 694 (879)
....+.++++.+. +..++ ...++.+.+|+..+++....+.. ...+. .+++ ++..+++++.|+ .+++|++....
T Consensus 79 ~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~-~~~~~~v~~~~~~~v~~~~~~~~~ 152 (287)
T d1pgua2 79 FGSQPKVASANND-GFTAV-LTNDDDLLILQSFTGDIIKSVRL-NSPGS--AVSL-SQNYVAVGLEEGNTIQVFKLSDLE 152 (287)
T ss_dssp CSSCEEEEEECSS-SEEEE-EETTSEEEEEETTTCCEEEEEEC-SSCEE--EEEE-CSSEEEEEETTTSCEEEEETTEEE
T ss_pred CCCCEEEEEECCC-CCEEE-EEECCCCEEEECCCEEEEEECCC-CCEEE--EEEC-CCCCEEEECCCCCEEEEEECCCCC
T ss_conf 1221014664167-85699-96033210000110035431012-22035--6521-475111000221000210001221
Q ss_pred EEEEEE--CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-----------CCCEEE
Q ss_conf 488995--3996699996289997999996799199998579960069981578878999974-----------998899
Q 002801 695 SIGTIK--TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-----------DATTLV 761 (879)
Q Consensus 695 ~i~~~~--~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-----------~~~~l~ 761 (879)
....+. +...+.+++|+|+ +.+|++|+.|+.|++||+.+.......+.+|...|.++.|+ ++.+++
T Consensus 153 ~~~~~~~~~~~~v~~~~~s~~-~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~ 231 (287)
T d1pgua2 153 VSFDLKTPLRAKPSYISISPS-ETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVA 231 (287)
T ss_dssp EEEECSSCCSSCEEEEEECTT-SSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEE
T ss_pred EEEEEEECCCCCEEEEEECCC-CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEE
T ss_conf 000121024785369995167-6521101111110000002332110001111111100000136541001267887027
Q ss_pred EEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEC
Q ss_conf 9976990999956999645568760797187886799999319999999929991999825
Q 002801 762 SASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHK 822 (879)
Q Consensus 762 sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~ 822 (879)
+|+.|++|++||+... ...+..+.+|...|+++.|+|++ .|+++|.|+.|++|++
T Consensus 232 sgs~D~~i~iw~~~~~-----~~~~~~~~~h~~~V~~v~~~~~~-~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 232 TGSLDTNIFIYSVKRP-----MKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWNV 286 (287)
T ss_dssp EEETTSCEEEEESSCT-----TCCEEETTSSTTCEEEEEEEETT-EEEEEETTSCEEEEEE
T ss_pred EECCCCEEEEEECCCC-----CEEEEEECCCCCCEEEEEECCCC-EEEEEECCCEEEEEEE
T ss_conf 6649995999888999-----75899927878985899998999-8999979992999997
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=7.2e-33 Score=207.12 Aligned_cols=298 Identities=9% Similarity=0.027 Sum_probs=221.1
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCC--CEEEEECCCCCCCCCCCCCCEEEECCC
Q ss_conf 446816898504757978721353458999889999938999999995899--299995486447676411341772358
Q 002801 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASR 617 (879)
Q Consensus 540 ~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~ 617 (879)
...+.+.+|+.....+.. .+|...|.+++|+|||++|++++.+. .|++|+..+... .....|.
T Consensus 21 ~~~g~v~v~d~~~~~~~~-------~~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~--------~~~~~~~ 85 (360)
T d1k32a3 21 VSRGQAFIQDVSGTYVLK-------VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA--------EKFEENL 85 (360)
T ss_dssp EETTEEEEECTTSSBEEE-------CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE--------EECCCCC
T ss_pred EECCEEEEEECCCCCEEE-------CCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCCCE--------EEEECCC
T ss_conf 989969999899994899-------1699988889998999999999928998999998999948--------8750897
Q ss_pred CCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEE----------CCCCEEE
Q ss_conf 981389981789996999607982999986887288981247874999998039999999994----------9994999
Q 002801 618 SKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS----------DDGSVKL 687 (879)
Q Consensus 618 ~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs----------~Dg~V~i 687 (879)
..+.+++|+|. +.+|++++.++.+.+|++.+++....+..|...+.++.|+| ++.+++.+. .++.+++
T Consensus 86 ~~v~~~~~spd-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~la~~~~~~~~~~~~~~~~~~~v 163 (360)
T d1k32a3 86 GNVFAMGVDRN-GKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHV 163 (360)
T ss_dssp CSEEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred CEEEEEEECCC-CCCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHCC-CEEEEEEECCCCCCCEEECCCCCEEE
T ss_conf 12774121145-43210001111100000122210000001355202301213-22566521233121100025654266
Q ss_pred EECCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCE------EEEEECCCCCCEEEEEEC-CCCEE
Q ss_conf 96999914889953996699996289997999996799199998579960------069981578878999974-99889
Q 002801 688 WSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKI------PLCTLIGHNKTVSYVKFV-DATTL 760 (879)
Q Consensus 688 wD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~------~~~~~~~h~~~V~~i~fs-~~~~l 760 (879)
||+.+++......+...+.++.|+|+ ++.|++++.++.+.+||...... .......|...+..+.|+ ++..+
T Consensus 164 ~d~~~~~~~~~~~~~~~~~~~~~spd-g~~l~~~s~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 242 (360)
T d1k32a3 164 YDMEGRKIFAATTENSHDYAPAFDAD-SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242 (360)
T ss_dssp EETTTTEEEECSCSSSBEEEEEECTT-SCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSC
T ss_pred ECCCCCCEEEECCCCCCCCCCCCCCC-CCEEEEEECCCCEECCCCCCCCEEECCCCCEEEEECCCCCCCCCEECCCCCCC
T ss_conf 30455713530354322110012577-99999995998557533354402320364117985246960120687776715
Q ss_pred EEEECCC---CEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC---EEEEEECCCCEEEEECCCCCCCEECCCC
Q ss_conf 9997699---099995699964556876079718788679999931999---9999929991999825999972000347
Q 002801 761 VSASTDN---TLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG---YVATGSETNEVFVYHKAFPMPALSFNFN 834 (879)
Q Consensus 761 ~sgs~D~---~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~---~lasgs~Dg~v~iw~~~~~~~~~~~~~~ 834 (879)
+++..+. ..++|.+.... .....+..+...+..+.+...+. ++++++.++.+++|++..++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------ 311 (360)
T d1k32a3 243 EAGEYDLNDMYKRSSPINVDP-----GDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT------ 311 (360)
T ss_dssp CCCCCCCTTGGGGCEECSCCC-----BCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE------
T ss_pred CCCCEEECCCCCCEEECCCCC-----CCEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEEECCCCEEE------
T ss_conf 531136526654001012476-----752675413898569999735997069996489987999979997498------
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 99999999878789979999990799939999937984999991
Q 002801 835 HADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 835 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw~l 878 (879)
.+.+.|.+++|+||++ .|++++.||.|++|++
T Consensus 312 -----------~~~~~v~~~~~SpDG~-~l~~~~~Dg~i~v~d~ 343 (360)
T d1k32a3 312 -----------EVKNNLTDLRLSADRK-TVMVRKDDGKIYTFPL 343 (360)
T ss_dssp -----------EEEEEEEEEEECTTSC-EEEEEETTSCEEEEES
T ss_pred -----------EECCCCCEEEECCCCC-EEEEEECCCEEEEEEC
T ss_conf -----------8648868799999898-9999978994999999
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.2e-30 Score=193.89 Aligned_cols=272 Identities=12% Similarity=0.101 Sum_probs=195.2
Q ss_pred CEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCC-CCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 124044468168985047579787213534589998899999389-9999999589929999548644767641134177
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 535 ~~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspd-g~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
.+++++.|+.+++|++.+......+.. ..+|.++|.+++|+|+ +.+|++|+.|+.|++|+......... ..
T Consensus 25 ~L~s~s~Dg~v~iwd~~~~~~~~~~~~--~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~~~~~~~~~~------~~ 96 (342)
T d1yfqa_ 25 LLLITSWDGSLTVYKFDIQAKNVDLLQ--SLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQA------LT 96 (342)
T ss_dssp EEEEEETTSEEEEEEEETTTTEEEEEE--EEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEE------CB
T ss_pred EEEEEECCCEEEEEECCCCCCCEEEEE--ECCCCCCEEEEEEECCCCCEEEECCCCCCEEEEECCCCCCCCC------CC
T ss_conf 999997999299997569986368988--5589998899999589997899812653114542044320000------01
Q ss_pred ECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCE----EEEEECCC--CCCEEEEEEECCCCCEEEEEECCCCEEE
Q ss_conf 23589813899817899969996079829999868872----88981247--8749999980399999999949994999
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ----VLTEMREH--ERRVWSIDFSSADPTLLASGSDDGSVKL 687 (879)
Q Consensus 614 ~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~----~~~~~~~h--~~~V~si~fsp~~~~~lasgs~Dg~V~i 687 (879)
..+........+.+ ....+++++.++.+.+||+.+.. .......+ ........+.+ .+..+++++.|+.|++
T Consensus 97 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~ 174 (342)
T d1yfqa_ 97 NNEANLGICRICKY-GDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDT-NSSRLIVGMNNSQVQW 174 (342)
T ss_dssp SCCCCSCEEEEEEE-TTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEE-CSSEEEEEESTTEEEE
T ss_pred CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEC-CCCCEEEECCCCCEEE
T ss_conf 11111111111111-111111101222111020234443302300024300120000010001-6870246517984788
Q ss_pred EECCCCCEEEEEE----CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEE-----EEE---------ECCCCCCE
Q ss_conf 9699991488995----39966999962899979999967991999985799600-----699---------81578878
Q 002801 688 WSINQGVSIGTIK----TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIP-----LCT---------LIGHNKTV 749 (879)
Q Consensus 688 wD~~~~~~i~~~~----~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~-----~~~---------~~~h~~~V 749 (879)
||+.......... ......+..+.+..+..+++++.|+.+.+|+....... ... ..+|...+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 254 (342)
T d1yfqa_ 175 FRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPV 254 (342)
T ss_dssp EESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCE
T ss_pred EECCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCEEEEEEECCCCCCCCCCC
T ss_conf 76056763411121025422101467636999878865489959999805986401112351256555314777623543
Q ss_pred EEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 999974-99889999769909999569996455687607971878867999993199999999299919998259
Q 002801 750 SYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKA 823 (879)
Q Consensus 750 ~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~ 823 (879)
+++.|+ ++.+|+||+.||.|++||+.+. +.+..+..+ .....++|+|++.++++++.|+.+++|...
T Consensus 255 ~~l~~sp~~~~lasg~~Dg~v~vWD~~~~------~~l~~~~~~-~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~ 322 (342)
T d1yfqa_ 255 NSIEFSPRHKFLYTAGSDGIISCWNLQTR------KKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEETTTT------EEEEECCCC-SSSEEEEEEECSSEEEEEEECTHHHHCSSS
T ss_pred EEEEECCCCCEEEEECCCCEEEEEECCCC------CEEEEECCC-CCCEEEEEEECCCEEEEEECCCCEEEEEEE
T ss_conf 15996698447999879998999999989------498870589-998799999479999999919927883012
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.97 E-value=1.3e-29 Score=187.87 Aligned_cols=327 Identities=10% Similarity=0.037 Sum_probs=218.0
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEC
Q ss_conf 24044468168985047579787213534589998899999389999999958992999954864476764113417723
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 615 (879)
+++...+|.+++||..+.++...+..+ ..+.+++|+|||+++++++.|++|++||+.+......... .....
T Consensus 35 ~V~~~~dg~v~vwD~~t~~~~~~l~~g------~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i--~~~~~ 106 (426)
T d1hzua2 35 SVTLRDAGQIALVDGDSKKIVKVIDTG------YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI--KIGIE 106 (426)
T ss_dssp EEEETTTTEEEEEETTTCSEEEEEECC------SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE--ECCSE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEECC------CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEE--ECCCC
T ss_conf 999759997999999999599999689------9803899989999999995899889997568860489998--67888
Q ss_pred CCCCEEEEEEECCCCCEE-EEEECCCCEEEEECCCCEEEEEECCCCCCE-----------EEEEEECCCCCEEEEE-ECC
Q ss_conf 589813899817899969-996079829999868872889812478749-----------9999803999999999-499
Q 002801 616 SRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQVLTEMREHERRV-----------WSIDFSSADPTLLASG-SDD 682 (879)
Q Consensus 616 ~~~~I~~i~~~~~~~~~l-~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V-----------~si~fsp~~~~~lasg-s~D 682 (879)
|...+.++.|+|. +.++ +++..++.+.+||..++++...+..|...+ ..+.+++ ++..++.. ...
T Consensus 107 ~~~~~~s~~~spD-G~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~-d~~~~~~~~~~~ 184 (426)
T d1hzua2 107 ARSVESSKFKGYE-DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH-EHPEFIVNVKET 184 (426)
T ss_dssp EEEEEECCSTTCT-TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECS-SSSEEEEEETTT
T ss_pred CCCEEEEEEECCC-CCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECC-CCCEEEEECCCC
T ss_conf 7645885002688-98799963589769998577641257862267773643642788503899878-787888852789
Q ss_pred CCEEEEECCCCC--EEEEEECCCCEEEEEEECCCCCEEEEEE-CCCEEEEEECCCCCEEEEEECC--CCCCEEEEEEC-C
Q ss_conf 949999699991--4889953996699996289997999996-7991999985799600699815--78878999974-9
Q 002801 683 GSVKLWSINQGV--SIGTIKTKANVCCVQFPLDSGRSLAFGS-ADHRIYYYDLRNSKIPLCTLIG--HNKTVSYVKFV-D 756 (879)
Q Consensus 683 g~V~iwD~~~~~--~i~~~~~~~~v~~v~~~p~~~~~l~tgs-~D~~I~iwDl~~~~~~~~~~~~--h~~~V~~i~fs-~ 756 (879)
+.+.+++..... .+..+.....+..+.|+|+ +++++++. .+..+.+++..+.+. +..... +......+.+. .
T Consensus 185 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 262 (426)
T d1hzua2 185 GKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSS-HRYFMTAANNSNKVAVIDSKDRRL-SALVDVGKTPHPGRGANFVHP 262 (426)
T ss_dssp TEEEEEECSSSSSCEEEEEECCSSEEEEEECTT-SCEEEEEETTCSEEEEEETTTTEE-EEEEECSSCCCCSCCEEEEET
T ss_pred CEEEEEEECCCCCEEEEEECCCCCCEEEEECCC-CCEEEEEEECCCCEEEEECCCCCE-EEEECCCCCCCCCCEEEEECC
T ss_conf 769999924665204577566775376137788-867886420110000000255627-887505874443420110069
Q ss_pred CC-EE--EEEECCCCEEEEECCCCCCC-CCCCCEEEEECCCCCEEEEEEECCCCEEEE-------EECCCCEEEEECCCC
Q ss_conf 98-89--99976990999956999645-568760797187886799999319999999-------929991999825999
Q 002801 757 AT-TL--VSASTDNTLKLWDLSMCTSR-VIDTPLHSFTGHTNVKNFVGLSVWDGYVAT-------GSETNEVFVYHKAFP 825 (879)
Q Consensus 757 ~~-~l--~sgs~D~~i~iwd~~~~~~~-~~~~~~~~~~~h~~~v~~v~~sp~~~~las-------gs~Dg~v~iw~~~~~ 825 (879)
+. .. ++.+.|+.+.+|+....... ...+....+.+|...+++++|+|++.+|+. ++.|++|++|++..+
T Consensus 263 ~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~ 342 (426)
T d1hzua2 263 KYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 342 (426)
T ss_dssp TTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred CCCCEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCC
T ss_conf 87745774157896598852256652033025868986688763678748998618885067988022887999989878
Q ss_pred CCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEE----ECCCCEEEEEE
Q ss_conf 972000347999999998787899799999907999399999----37984999991
Q 002801 826 MPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAA----NSSGNIKILEM 878 (879)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~----~~Dg~I~iw~l 878 (879)
+....+.-... ......+...|.+++|+|||+.+++++ +.+|.|+||+.
T Consensus 343 ~~~~~~~~~~~----~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~ 395 (426)
T d1hzua2 343 DAKYQVLPIAE----WADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDD 395 (426)
T ss_dssp TSCCEEECHHH----HHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEET
T ss_pred CCCEEEECCCH----HCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEEC
T ss_conf 76708950211----025677885189879999999999997248888982999999
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.97 E-value=1.7e-25 Score=163.44 Aligned_cols=273 Identities=13% Similarity=0.079 Sum_probs=210.7
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEE-EEECCCCEEEEECCCCCCCCCCCCCCEEEE
Q ss_conf 2404446816898504757978721353458999889999938999999-995899299995486447676411341772
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVEM 614 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~la-t~~~dg~I~iwd~~~~~~~~~~~~~~~~~~ 614 (879)
|++...++.+.+||..+.++.+.+..+ ..+..++|+|||++++ ++..+++|.+||+.+... +..+
T Consensus 5 yV~~~~~~~v~v~D~~t~~~~~~i~~g------~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~--------~~~~ 70 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNKVTATIPVG------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNV--------IATV 70 (301)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECS------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEE--------EEEE
T ss_pred EEEECCCCEEEEEECCCCEEEEEEECC------CCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCE--------EEEE
T ss_conf 999789998999999999599999889------98369999289899999978999899999998941--------0320
Q ss_pred CCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEE-EEEECCCCEEEEECCCC
Q ss_conf 35898138998178999699960798299998688728898124787499999803999999-99949994999969999
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLL-ASGSDDGSVKLWSINQG 693 (879)
Q Consensus 615 ~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~l-asgs~Dg~V~iwD~~~~ 693 (879)
.....+..+.|++.....++++..++.+.+|+..+++....+.. ...+.++.|+| ++..+ +++..+..+.+|+..+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-dg~~~~~~~~~~~~~~~~~~~~~ 148 (301)
T d1l0qa2 71 PAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTK 148 (301)
T ss_dssp ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTT
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCC-CCCCEEEEEEC-CCCEEEEEECCCCCEEEEECCCC
T ss_conf 00246431100011111111111110011001243024320244-44423787605-89715542011110011000146
Q ss_pred CEEEEEECCCCEEEEEEECCCCCEEEEEECC-CEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEEC---CCC
Q ss_conf 1488995399669999628999799999679-9199998579960069981578878999974-9988999976---990
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGRSLAFGSAD-HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSAST---DNT 768 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~D-~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~---D~~ 768 (879)
..+..+.....+.++.++|+ +..+++++.+ +.+.+|+..... ....... ......+.|. ++..++.++. ++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~ 225 (301)
T d1l0qa2 149 AVINTVSVGRSPKGIAVTPD-GTKVYVANFDSMSISVIDTVTNS-VIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFNT 225 (301)
T ss_dssp EEEEEEECCSSEEEEEECTT-SSEEEEEETTTTEEEEEETTTTE-EEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCCE
T ss_pred CEEEECCCCCCCEEEEEECC-CCCEEEECCCCCCCCCCCCCCEE-EEECCCC-CCCCCEEECCCCCCCCCCCCCCCEEEE
T ss_conf 30353156788428886046-54013101211111111111000-1110133-577503110111101111002100002
Q ss_pred EEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEE-EEEECCCCEEEEECCCCCCCEECCCC
Q ss_conf 9999569996455687607971878867999993199999-99929991999825999972000347
Q 002801 769 LKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYV-ATGSETNEVFVYHKAFPMPALSFNFN 834 (879)
Q Consensus 769 i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-asgs~Dg~v~iw~~~~~~~~~~~~~~ 834 (879)
|.+||+.++ +.+..+.. ...+..++|+|+|++| ++++.|+.|++||+.+++.+.++..+
T Consensus 226 v~v~D~~t~------~~~~~~~~-~~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~vg 285 (301)
T d1l0qa2 226 VSMIDTGTN------KITARIPV-GPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVG 285 (301)
T ss_dssp EEEEETTTT------EEEEEEEC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred EEEEECCCC------EEEEEECC-CCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCEEEEEEECC
T ss_conf 323656998------19999848-9987799991898999999899996999999999599999689
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.97 E-value=5.3e-28 Score=178.25 Aligned_cols=319 Identities=10% Similarity=0.018 Sum_probs=202.0
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEC
Q ss_conf 24044468168985047579787213534589998899999389999999958992999954864476764113417723
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 615 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 615 (879)
+++...+|.+.+||..+.++.+.+..+ ..+..++|+|||+++++++.|++|.+||+.+......... .....
T Consensus 35 ~v~~~d~g~v~v~D~~t~~v~~~~~~g------~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i--~~~~~ 106 (432)
T d1qksa2 35 SVTLRDAGQIALIDGSTYEIKTVLDTG------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEI--KIGSE 106 (432)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECS------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEE--ECCSE
T ss_pred EEEECCCCEEEEEECCCCCEEEEEECC------CCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCEEEEEE--ECCCC
T ss_conf 999769997999989998399997379------9713799889999999982899978998108981288998--44889
Q ss_pred CCCCEEEEEEECCCCCEE-EEEECCCCEEEEECCCCEEEEEECC-----------CCCCEEEEEEECCCCCE-EEEEECC
Q ss_conf 589813899817899969-9960798299998688728898124-----------78749999980399999-9999499
Q 002801 616 SRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQVLTEMRE-----------HERRVWSIDFSSADPTL-LASGSDD 682 (879)
Q Consensus 616 ~~~~I~~i~~~~~~~~~l-~s~~~dg~V~iwd~~t~~~~~~~~~-----------h~~~V~si~fsp~~~~~-lasgs~D 682 (879)
+...+.+..|+| ++.++ +++..++.|.+||..+++++..+.. +......+.+++ ++.. +++...+
T Consensus 107 ~~~~~~s~~~Sp-DG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~-dg~~~~vs~~~~ 184 (432)
T d1qksa2 107 ARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASH-YRPEFIVNVKET 184 (432)
T ss_dssp EEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECS-SSSEEEEEETTT
T ss_pred CCCEEEECCCCC-CCCEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECC-CCCEEEEEECCC
T ss_conf 877698432188-888899981789827999076554225402477643522016888505899878-999899998168
Q ss_pred CCEEEEECCCCCEE--EEEECCCCEEEEEEECCCCCEEEEEEC-CCEEEEEECCCCCEEEEEECC-----CCCCEEEEEE
Q ss_conf 94999969999148--899539966999962899979999967-991999985799600699815-----7887899997
Q 002801 683 GSVKLWSINQGVSI--GTIKTKANVCCVQFPLDSGRSLAFGSA-DHRIYYYDLRNSKIPLCTLIG-----HNKTVSYVKF 754 (879)
Q Consensus 683 g~V~iwD~~~~~~i--~~~~~~~~v~~v~~~p~~~~~l~tgs~-D~~I~iwDl~~~~~~~~~~~~-----h~~~V~~i~f 754 (879)
+.|.+||..+.+.. ..+.....+..+.|+|+ ++++++++. +..+.++|..+.+. +..+.. |........+
T Consensus 185 ~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spd-g~~~~va~~~~~~v~v~d~~~~~~-~~~~~~g~~~~~~~~~~~~~~ 262 (432)
T d1qksa2 185 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGS-HRYFITAANARNKLVVIDTKEGKL-VAIEDTGGQTPHPGRGANFVH 262 (432)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTT-SCEEEEEEGGGTEEEEEETTTTEE-EEEEECSSSSBCCTTCEEEEE
T ss_pred CEEEEEECCCCCCCEEEEECCCCCCCCCEECCC-CCEEEEECCCCCEEEEEECCCCEE-EEEECCCCCCCCCCCCCCEEC
T ss_conf 829999843787522799833675426538898-879999516663677761445268-887214862245676641014
Q ss_pred C-CCCEEEEEE-CCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEE--
Q ss_conf 4-998899997-699099995699964556876079718788679999931999999992999199982599997200--
Q 002801 755 V-DATTLVSAS-TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALS-- 830 (879)
Q Consensus 755 s-~~~~l~sgs-~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~-- 830 (879)
. .+....+.. .++.+.+|+...... ..|...+....++|++..+++++.++..++|......+...
T Consensus 263 ~~~g~~~~~~~lg~~~v~~~~~~~~~~----------~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~ 332 (432)
T d1qksa2 263 PTFGPVWATSHMGDDSVALIGTDPEGH----------PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEIS 332 (432)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTC----------TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHH
T ss_pred CCCCCEECCCCCCCCEEEECCCCCCCC----------CCCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCCCCCCCEE
T ss_conf 898831021356883587624566555----------4656577799886899768887268864102112678887703
Q ss_pred --CCCCCCCCC---------------CCCCCCCCCCCEEEEEEECCCCCEEEEEE-----CCCCEEEEE
Q ss_conf --034799999---------------99987878997999999079993999993-----798499999
Q 002801 831 --FNFNHADPL---------------SGPETDDAAQFISSVCWRGQSSNTLVAAN-----SSGNIKILE 877 (879)
Q Consensus 831 --~~~~~~~~~---------------~~~~~~~h~~~V~~v~~~p~~~~~l~s~~-----~Dg~I~iw~ 877 (879)
..+.....+ .+.....|...|.+++|+|+|+ .++.+. .+|.|+||+
T Consensus 333 ~sv~vpDg~~la~~s~d~~~k~w~~~~~~~l~~~~~~v~~~~fS~DG~-~v~~S~~~~~~~~g~i~i~D 400 (432)
T d1qksa2 333 GSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGT-EVWFSVWNGKDQESALVVVD 400 (432)
T ss_dssp TCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSS-EEEEEEECCTTSCCEEEEEE
T ss_pred EEEEEEECHHHCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCC-EEEEEEECCCCCCCCEEEEE
T ss_conf 599999624610455678448633434444578998689767989999-99999704888888689999
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.95 E-value=1.8e-23 Score=151.37 Aligned_cols=261 Identities=10% Similarity=0.103 Sum_probs=198.4
Q ss_pred EEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEE-EEEECCCCEEEEECCCCEEEEEECCCCC
Q ss_conf 999958992999954864476764113417723589813899817899969-9960798299998688728898124787
Q 002801 583 FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQVLTEMREHER 661 (879)
Q Consensus 583 lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l-~s~~~dg~V~iwd~~t~~~~~~~~~h~~ 661 (879)
+++.+.|++|.+||.++.. .+..+.....+..++|+|. ++++ +++..++.|.+||+.+++.+..+..+.
T Consensus 5 yV~~~~~~~v~v~D~~t~~--------~~~~i~~g~~p~~va~spd-G~~l~v~~~~~~~i~v~d~~t~~~~~~~~~~~- 74 (301)
T d1l0qa2 5 YIANSESDNISVIDVTSNK--------VTATIPVGSNPMGAVISPD-GTKVYVANAHSNDVSIIDTATNNVIATVPAGS- 74 (301)
T ss_dssp EEEETTTTEEEEEETTTTE--------EEEEEECSSSEEEEEECTT-SSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-
T ss_pred EEEECCCCEEEEEECCCCE--------EEEEEECCCCCEEEEEECC-CCEEEEEECCCCEEEEEECCCCCEEEEEECCC-
T ss_conf 9997899989999999995--------9999988998369999289-89999997899989999999894103200024-
Q ss_pred CEEEEEEECCCCC-EEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEE
Q ss_conf 4999998039999-999994999499996999914889953996699996289997999996799199998579960069
Q 002801 662 RVWSIDFSSADPT-LLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLC 740 (879)
Q Consensus 662 ~V~si~fsp~~~~-~lasgs~Dg~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~ 740 (879)
.+..+.|++ ++. .++++..++.+.+|+..+++....+.....+.++.|+|++..+++++..+..+.+|+..+... ..
T Consensus 75 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~-~~ 152 (301)
T d1l0qa2 75 SPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-IN 152 (301)
T ss_dssp SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EE
T ss_pred CCCCCCCCC-CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCEEEEEECCCCEEEEEECCCCCEEEEECCCCCE-EE
T ss_conf 643110001-1111111111110011001243024320244444237876058971554201111001100014630-35
Q ss_pred EECCCCCCEEEEEEC-CCCEEEEEECC-CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEE---CCC
Q ss_conf 981578878999974-99889999769-9099995699964556876079718788679999931999999992---999
Q 002801 741 TLIGHNKTVSYVKFV-DATTLVSASTD-NTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGS---ETN 815 (879)
Q Consensus 741 ~~~~h~~~V~~i~fs-~~~~l~sgs~D-~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs---~Dg 815 (879)
.+..+ ..+..+.++ ++..+++++.+ +.+.+|+.... ........ ......+.+++++..++.++ .++
T Consensus 153 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~ 224 (301)
T d1l0qa2 153 TVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN------SVIDTVKV-EAAPSGIAVNPEGTKAYVTNVDKYFN 224 (301)
T ss_dssp EEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT------EEEEEEEC-SSEEEEEEECTTSSEEEEEEECSSCC
T ss_pred ECCCC-CCCEEEEEECCCCCEEEECCCCCCCCCCCCCCE------EEEECCCC-CCCCCEEECCCCCCCCCCCCCCCEEE
T ss_conf 31567-884288860465401310121111111111100------01110133-57750311011110111100210000
Q ss_pred CEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEE-EEEECCCCEEEEEE
Q ss_conf 1999825999972000347999999998787899799999907999399-99937984999991
Q 002801 816 EVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTL-VAANSSGNIKILEM 878 (879)
Q Consensus 816 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l-~s~~~Dg~I~iw~l 878 (879)
.|++||...++.+..+.. ...+.+++|+|++. .| ++++.|+.|++|++
T Consensus 225 ~v~v~D~~t~~~~~~~~~--------------~~~~~~va~spdg~-~l~va~~~~~~i~v~D~ 273 (301)
T d1l0qa2 225 TVSMIDTGTNKITARIPV--------------GPDPAGIAVTPDGK-KVYVALSFCNTVSVIDT 273 (301)
T ss_dssp EEEEEETTTTEEEEEEEC--------------CSSEEEEEECTTSS-EEEEEETTTTEEEEEET
T ss_pred EEEEEECCCCEEEEEECC--------------CCCEEEEEEECCCC-EEEEEECCCCEEEEEEC
T ss_conf 232365699819999848--------------99877999918989-99999899996999999
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.95 E-value=3.3e-27 Score=173.56 Aligned_cols=261 Identities=11% Similarity=0.071 Sum_probs=188.0
Q ss_pred CCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEE
Q ss_conf 81689850475797872135345899988999993899999999589929999548644767641134177235898138
Q 002801 543 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 622 (879)
Q Consensus 543 ~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~ 622 (879)
..+.+|+..+.++.. +.+|...|.+++|+||++++++++.++.+.+|+..+... ......+...+.+
T Consensus 66 ~~v~v~d~~~~~~~~------~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 132 (360)
T d1k32a3 66 DFLGIYDYRTGKAEK------FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP-------TVIERSREAMITD 132 (360)
T ss_dssp EEEEEEETTTCCEEE------CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE-------EEEEECSSSCCCC
T ss_pred CEEEEEECCCCCEEE------EECCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCE-------EEEEECCCCCCCC
T ss_conf 899999899994887------508971277412114543210001111100000122210-------0000013552023
Q ss_pred EEEECCCCCEEEEEE----------CCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCC
Q ss_conf 998178999699960----------7982999986887288981247874999998039999999994999499996999
Q 002801 623 ICWNSYIKSQIASSN----------FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQ 692 (879)
Q Consensus 623 i~~~~~~~~~l~s~~----------~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~ 692 (879)
++|+|. +.+|+.+. .++.+.+|++.+++..... .+...+..+.|+| +++.|++++.|+.+.+||...
T Consensus 133 ~~~spd-g~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~-~~~~~~~~~~~sp-dg~~l~~~s~~~~~~~~d~~~ 209 (360)
T d1k32a3 133 FTISDN-SRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT-TENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVV 209 (360)
T ss_dssp EEECTT-SCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS-CSSSBEEEEEECT-TSCEEEEEESCCCCCEECSSS
T ss_pred HHHCCC-EEEEEEECCCCCCCEEECCCCCEEEECCCCCCEEEEC-CCCCCCCCCCCCC-CCCEEEEEECCCCEECCCCCC
T ss_conf 012132-2566521233121100025654266304557135303-5432211001257-799999995998557533354
Q ss_pred CCEE-------EEEE-CCCCEEEEEEECCCCCEEEEEECCC-----EEEEEECCCCCEEEEEECCCCCCEEEEEEC-C--
Q ss_conf 9148-------8995-3996699996289997999996799-----199998579960069981578878999974-9--
Q 002801 693 GVSI-------GTIK-TKANVCCVQFPLDSGRSLAFGSADH-----RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-D-- 756 (879)
Q Consensus 693 ~~~i-------~~~~-~~~~v~~v~~~p~~~~~l~tgs~D~-----~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~-- 756 (879)
.... ..+. +...+..+.|+|+ +..++++..+. .+..++...+. ...+..+...+..+.+. .
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 286 (360)
T d1k32a3 210 LNFSFEVVSKPFVIPLIPGSPNPTKLVPR-SMTSEAGEYDLNDMYKRSSPINVDPGD--YRMIIPLESSILIYSVPVHGE 286 (360)
T ss_dssp SCEECCSCBEEEEEESSTTCCCGGGCCCG-GGSCCCCCCCCTTGGGGCEECSCCCBC--EEEEEECSSEEEEEECCCCCS
T ss_pred CCEEECCCCCEEEEECCCCCCCCCEECCC-CCCCCCCCEEECCCCCCEEECCCCCCC--EEEEEECCCCCEEEEEEECCC
T ss_conf 40232036411798524696012068777-671553113652665400101247675--267541389856999973599
Q ss_pred -CCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECC
Q ss_conf -9889999769909999569996455687607971878867999993199999999299919998259999720003
Q 002801 757 -ATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 757 -~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~ 832 (879)
..++++++.++.|++||+... + +.. |...+..++|||||++|++++.||.|++|++..+....++.
T Consensus 287 ~~~~~~~~~~~~~i~~~d~~~~------~-~~~---~~~~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~ 353 (360)
T d1k32a3 287 FAAYYQGAPEKGVLLKYDVKTR------K-VTE---VKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353 (360)
T ss_dssp HHHHHHCCCCCEEEEEEETTTC------C-EEE---EEEEEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECC
T ss_pred CEEEEEECCCCCEEEEEECCCC------E-EEE---ECCCCCEEEECCCCCEEEEEECCCEEEEEECCCCCCCEEEE
T ss_conf 7069996489987999979997------4-988---64886879999989899999789949999999998545998
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.94 E-value=5.3e-24 Score=154.56 Aligned_cols=280 Identities=10% Similarity=0.027 Sum_probs=201.9
Q ss_pred CEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEE-EEECCCCEEEEECCCCCCCCCC-CCCCEE
Q ss_conf 12404446816898504757978721353458999889999938999999-9958992999954864476764-113417
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRD-IHYPVV 612 (879)
Q Consensus 535 ~~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~la-t~~~dg~I~iwd~~~~~~~~~~-~~~~~~ 612 (879)
.++++..|+.+.+||..+.++...+... .+...+.+++|+|||++++ +++.++.|.+||+.+....... ...+
T Consensus 3 ~~vt~~~d~~v~v~D~~s~~~~~~i~~~---~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~~~~~-- 77 (337)
T d1pbyb_ 3 YILAPARPDKLVVIDTEKMAVDKVITIA---DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-- 77 (337)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEEEECT---TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT--
T ss_pred EEEEECCCCEEEEEECCCCEEEEEEECC---CCCCCCCEEEECCCCCEEEEEECCCCEEEEEECCCCCEEEEEECCCC--
T ss_conf 9999767998999999999499999877---88998237999999899999978999499999999929888724777--
Q ss_pred EECCCCCEEEEEEECCCCCEEEEEE------------CCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEE
Q ss_conf 7235898138998178999699960------------7982999986887288981247874999998039999999994
Q 002801 613 EMASRSKLSSICWNSYIKSQIASSN------------FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGS 680 (879)
Q Consensus 613 ~~~~~~~I~~i~~~~~~~~~l~s~~------------~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs 680 (879)
..+...+..++|++. +..++++. .++.+.+||..+++....+. +...+..+.|+| ++..+++++
T Consensus 78 -~~~~~~~~~v~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~~~~s~-dg~~l~~~~ 153 (337)
T d1pbyb_ 78 -EERVKSLFGAALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE-APRQITMLAWAR-DGSKLYGLG 153 (337)
T ss_dssp -TEEEECTTCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE-CCSSCCCEEECT-TSSCEEEES
T ss_pred -CCCCCCEEEEEECCC-CCEEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEEECC-CCCCCEEEEECC-CCCEEEEEC
T ss_conf -312540254898687-7579995047762034203455521203566775988414-568721899868-888899971
Q ss_pred CCCCEEEEECCCCCEEEEEECCCCEEEEEEECCC-----------------------CCEEEEEECCCEEEEEECCCCCE
Q ss_conf 9994999969999148899539966999962899-----------------------97999996799199998579960
Q 002801 681 DDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDS-----------------------GRSLAFGSADHRIYYYDLRNSKI 737 (879)
Q Consensus 681 ~Dg~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~-----------------------~~~l~tgs~D~~I~iwDl~~~~~ 737 (879)
.+ +.+||..+++...++..........+.|+. ......+..++.+.+||...+..
T Consensus 154 ~~--~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T d1pbyb_ 154 RD--LHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp SS--EEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred CC--CCEEEEECCCEEEEEECCCCCCCCEECCCCCEEECCCCCCCEEEEEEEEEEECCCEEEECCCCCCEEEEECCCCCE
T ss_conf 77--5056630372788861477543311357763140146653124663244410366045403676179998688858
Q ss_pred EEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCC
Q ss_conf 069981578878999974-9988999976990999956999645568760797187886799999319999999929991
Q 002801 738 PLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNE 816 (879)
Q Consensus 738 ~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~ 816 (879)
....+..+...+..+.++ ++.+++.+ ++.+++||+.+. ..+..+. +...+.+++|+|+|++|++++.|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~------~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~ 302 (337)
T d1pbyb_ 232 AMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN------ASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGD 302 (337)
T ss_dssp EEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT------EEEEEEE-CSSCCCEEEECTTSCEEEEESBSSE
T ss_pred EEEEECCCCCCEEEEEECCCCEEEEEC--CCCEEEEECCCC------CEEEEEC-CCCCEEEEEECCCCCEEEEEECCCC
T ss_conf 889832887505888742661399973--552899989889------6999974-8998899999789999999949992
Q ss_pred EEEEECCCCCCCEECCCC
Q ss_conf 999825999972000347
Q 002801 817 VFVYHKAFPMPALSFNFN 834 (879)
Q Consensus 817 v~iw~~~~~~~~~~~~~~ 834 (879)
|++||....+.+..++.+
T Consensus 303 i~v~D~~t~~~v~~i~~~ 320 (337)
T d1pbyb_ 303 LAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp EEEEETTTCCEEEEEECG
T ss_pred EEEEECCCCCEEEEEECC
T ss_conf 999999987698999889
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=2.4e-23 Score=150.68 Aligned_cols=300 Identities=9% Similarity=0.016 Sum_probs=198.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCEEE--EEECCCCCCCCCCCEEEE
Q ss_conf 344456779988877544444345578856644689871240444681689850475797--872135345899988999
Q 002801 497 VRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK--ADLNQGDLLNSSNLVCSL 574 (879)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~~w~~~~~~~~--~~l~~~~l~~h~~~V~si 574 (879)
+..-.||+||++. +++..|+.+++|+..+.+.. +.++.+ .+|.+.+.++
T Consensus 64 ~~~vafSPDGk~l---------------------------~~~~~d~~v~vwd~~t~~~~~~~~i~~~--~~~~~~~~s~ 114 (426)
T d1hzua2 64 VHISRMSASGRYL---------------------------LVIGRDARIDMIDLWAKEPTKVAEIKIG--IEARSVESSK 114 (426)
T ss_dssp EEEEEECTTSCEE---------------------------EEEETTSEEEEEETTSSSCEEEEEEECC--SEEEEEEECC
T ss_pred EEEEEECCCCCEE---------------------------EEEECCCCEEEEECCCCCEEEEEEEECC--CCCCCEEEEE
T ss_conf 0389998999999---------------------------9995899889997568860489998678--8876458850
Q ss_pred EECCCCCEEEE-EECCCCEEEEECCCCCCCCCCC----CCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCC
Q ss_conf 99389999999-9589929999548644767641----134177235898138998178999699960798299998688
Q 002801 575 SFDRDGELFAA-AGVNKKIKVFECDAIINENRDI----HYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (879)
Q Consensus 575 ~fspdg~~lat-~~~dg~I~iwd~~~~~~~~~~~----~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t 649 (879)
+|+|||+++++ +..++.+++|+........... ......+.+......+..++.....+.+....+.+.+++...
T Consensus 115 ~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~ 194 (426)
T d1hzua2 115 FKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 194 (426)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSS
T ss_pred EECCCCCEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEECCCCCEEEEECCCCCEEEEEEECC
T ss_conf 02688987999635897699985776412578622677736436427885038998787878888527897699999246
Q ss_pred CEE-EEEECCCCCCEEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCEEEEEECC---CCEEEEEEECCCCCEEEE--EE
Q ss_conf 728-8981247874999998039999999994-9994999969999148899539---966999962899979999--96
Q 002801 650 SQV-LTEMREHERRVWSIDFSSADPTLLASGS-DDGSVKLWSINQGVSIGTIKTK---ANVCCVQFPLDSGRSLAF--GS 722 (879)
Q Consensus 650 ~~~-~~~~~~h~~~V~si~fsp~~~~~lasgs-~Dg~V~iwD~~~~~~i~~~~~~---~~v~~v~~~p~~~~~l~t--gs 722 (879)
... ......+...++.+.|+| ++.+++++. .+..+.+++..+++.+..+... .......+.+.....+.. .+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (426)
T d1hzua2 195 IDNLTVTSIGAAPFLADGGWDS-SHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL 273 (426)
T ss_dssp SSSCEEEEEECCSSEEEEEECT-TSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECT
T ss_pred CCCEEEEEECCCCCCEEEEECC-CCCEEEEEEECCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCEEEECCC
T ss_conf 6520457756677537613778-886788642011000000025562788750587444342011006987745774157
Q ss_pred CCCEEEEEECCCCC------EEEEEECCCCCCEEEEEEC-CCCEEE-------EEECCCCEEEEECCCCCCCCCCCCEEE
Q ss_conf 79919999857996------0069981578878999974-998899-------997699099995699964556876079
Q 002801 723 ADHRIYYYDLRNSK------IPLCTLIGHNKTVSYVKFV-DATTLV-------SASTDNTLKLWDLSMCTSRVIDTPLHS 788 (879)
Q Consensus 723 ~D~~I~iwDl~~~~------~~~~~~~~h~~~V~~i~fs-~~~~l~-------sgs~D~~i~iwd~~~~~~~~~~~~~~~ 788 (879)
.|+.+.+|+..... .....+.+|...+..+.|+ ++.+|+ +++.|++|++||+.++. +..+
T Consensus 274 ~d~~v~~~~~~~~~~~~~~~~~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~------~~~~ 347 (426)
T d1hzua2 274 GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLD------AKYQ 347 (426)
T ss_dssp TTCEEEEEECCTTTCTTTBTSEEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTT------SCCE
T ss_pred CCCEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEECCCCC------CCEE
T ss_conf 8965988522566520330258689866887636787489986188850679880228879999898787------6708
Q ss_pred E---------ECCCCCEEEEEEECCCCEEE-EE----ECCCCEEEEECCCCCCCEECC
Q ss_conf 7---------18788679999931999999-99----299919998259999720003
Q 002801 789 F---------TGHTNVKNFVGLSVWDGYVA-TG----SETNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 789 ~---------~~h~~~v~~v~~sp~~~~la-sg----s~Dg~v~iw~~~~~~~~~~~~ 832 (879)
+ ..|...+..++|||||++++ ++ +.++.|.|||..+.+....++
T Consensus 348 ~~~~~~~~~~~~~~~rv~~~~fSpDGk~i~vs~~~~~~~~~~i~v~D~~T~k~~~~i~ 405 (426)
T d1hzua2 348 VLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVK 405 (426)
T ss_dssp EECHHHHHCCCSSCCCEEEEEECSSSSEEEEEECCCTTSCCEEEEEETTTTEEEEEEC
T ss_pred EECCCHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEC
T ss_conf 9502110256778851898799999999999972488889829999999873899987
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.93 E-value=8.1e-23 Score=147.52 Aligned_cols=264 Identities=11% Similarity=0.033 Sum_probs=194.0
Q ss_pred CEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEEC-CCCCEEEEEEECCCCCEE-EEEECCCCEEEEECCCCEEEEEECC
Q ss_conf 99999958992999954864476764113417723-589813899817899969-9960798299998688728898124
Q 002801 581 ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQVLTEMRE 658 (879)
Q Consensus 581 ~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~I~~i~~~~~~~~~l-~s~~~dg~V~iwd~~t~~~~~~~~~ 658 (879)
+++++++.|++|+|||+.+... . ..+... +...+.+++|+|. ++++ ++++.++.|.+||+.+++.+..+..
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~~~-----~-~~i~~~~~~~~~~~i~~spD-g~~l~v~~~~~~~v~v~D~~t~~~~~~~~~ 74 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKMAV-----D-KVITIADAGPTPMVPMVAPG-GRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE-----E-EEEECTTCTTCCCCEEECTT-SSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred EEEEEECCCCEEEEEECCCCEE-----E-EEEECCCCCCCCCEEEECCC-CCEEEEEECCCCEEEEEECCCCCEEEEEEC
T ss_conf 6999976799899999999949-----9-99987788998237999999-899999978999499999999929888724
Q ss_pred CC-----CCEEEEEEECCCCCEEEEEE------------CCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEE
Q ss_conf 78-----74999998039999999994------------99949999699991488995399669999628999799999
Q 002801 659 HE-----RRVWSIDFSSADPTLLASGS------------DDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 659 h~-----~~V~si~fsp~~~~~lasgs------------~Dg~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tg 721 (879)
+. ..+..+.|+| +++.++++. .+..+.+||..++..+..+.....+.++.|+|+ +.+++++
T Consensus 75 ~~~~~~~~~~~~v~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~d-g~~l~~~ 152 (337)
T d1pbyb_ 75 STPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARD-GSKLYGL 152 (337)
T ss_dssp CBTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTT-SSCEEEE
T ss_pred CCCCCCCCCEEEEEECC-CCCEEEEEECCCCCEEEECCCCCCCEEECCCCCCEEEEECCCCCCCEEEEECCC-CCEEEEE
T ss_conf 77731254025489868-775799950477620342034555212035667759884145687218998688-8889997
Q ss_pred ECCCEEEEEECCCCCEEEEEECCCCCC---------------------EEE--EEEC-CCCEEEEEECCCCEEEEECCCC
Q ss_conf 679919999857996006998157887---------------------899--9974-9988999976990999956999
Q 002801 722 SADHRIYYYDLRNSKIPLCTLIGHNKT---------------------VSY--VKFV-DATTLVSASTDNTLKLWDLSMC 777 (879)
Q Consensus 722 s~D~~I~iwDl~~~~~~~~~~~~h~~~---------------------V~~--i~fs-~~~~l~sgs~D~~i~iwd~~~~ 777 (879)
+. .+.+||....+. ...+..+... ... .... +......++.++.+.+|+...+
T Consensus 153 ~~--~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (337)
T d1pbyb_ 153 GR--DLHVMDPEAGTL-VEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG 229 (337)
T ss_dssp SS--SEEEEETTTTEE-EEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC
T ss_pred CC--CCCEEEEECCCE-EEEEECCCCCCCCEECCCCCEEECCCCCCCEEEEEEEEEEECCCEEEECCCCCCEEEEECCCC
T ss_conf 17--750566303727-888614775433113577631401466531246632444103660454036761799986888
Q ss_pred CCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEE
Q ss_conf 64556876079718788679999931999999992999199982599997200034799999999878789979999990
Q 002801 778 TSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWR 857 (879)
Q Consensus 778 ~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 857 (879)
. .....+.++......+++++++.+++.+ ++.+++|++...+.+..+.. ...+.+++|+
T Consensus 230 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~~~--------------~~~~~~~~~s 288 (337)
T d1pbyb_ 230 E-----MAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL--------------PHSYYSVNVS 288 (337)
T ss_dssp C-----EEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC--------------SSCCCEEEEC
T ss_pred C-----EEEEEECCCCCCEEEEEECCCCEEEEEC--CCCEEEEECCCCCEEEEECC--------------CCCEEEEEEC
T ss_conf 5-----8889832887505888742661399973--55289998988969999748--------------9988999997
Q ss_pred CCCCCEEEEEECCCCEEEEEE
Q ss_conf 799939999937984999991
Q 002801 858 GQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 858 p~~~~~l~s~~~Dg~I~iw~l 878 (879)
|++. .|++++.||.|.||+.
T Consensus 289 ~dG~-~l~v~~~~~~i~v~D~ 308 (337)
T d1pbyb_ 289 TDGS-TVWLGGALGDLAAYDA 308 (337)
T ss_dssp TTSC-EEEEESBSSEEEEEET
T ss_pred CCCC-EEEEEECCCCEEEEEC
T ss_conf 8999-9999949992999999
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.93 E-value=2.2e-23 Score=150.83 Aligned_cols=291 Identities=11% Similarity=0.056 Sum_probs=187.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEEECCCE--EEEEECCCCCCCCCCCEEEE
Q ss_conf 3444567799888775444443455788566446898712404446816898504757--97872135345899988999
Q 002801 497 VRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR--VKADLNQGDLLNSSNLVCSL 574 (879)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~d~~i~~w~~~~~~--~~~~l~~~~l~~h~~~V~si 574 (879)
+..-.||+||++. +++..|+.+.+|+..+.+ ....++.+. +|.+.+.+.
T Consensus 64 ~~~v~fSpDG~~l---------------------------~~~s~dg~v~~~d~~t~~~~~~~~i~~~~--~~~~~~~s~ 114 (432)
T d1qksa2 64 VHISRLSASGRYL---------------------------FVIGRDGKVNMIDLWMKEPTTVAEIKIGS--EARSIETSK 114 (432)
T ss_dssp EEEEEECTTSCEE---------------------------EEEETTSEEEEEETTSSSCCEEEEEECCS--EEEEEEECC
T ss_pred EEEEEECCCCCEE---------------------------EEECCCCCEEEEEEECCCCEEEEEEECCC--CCCCEEEEC
T ss_conf 1379988999999---------------------------99828999789981089812889984488--987769843
Q ss_pred EECCCCCEE-EEEECCCCEEEEECCCCCCCCCC----CCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCC
Q ss_conf 993899999-99958992999954864476764----1134177235898138998178999699960798299998688
Q 002801 575 SFDRDGELF-AAAGVNKKIKVFECDAIINENRD----IHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (879)
Q Consensus 575 ~fspdg~~l-at~~~dg~I~iwd~~~~~~~~~~----~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t 649 (879)
.|+|||+++ +++..++.|++||..+....... .........+......+.+++.....+++...++.|.+|+..+
T Consensus 115 ~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~ 194 (432)
T d1qksa2 115 MEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTD 194 (432)
T ss_dssp STTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTC
T ss_pred CCCCCCCEEEEECCCCCEEEEEECCCCCCEEEECCCCCCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEEECCC
T ss_conf 21888888999817898279990765542254024776435220168885058998789998999981688299998437
Q ss_pred CEEEEEEC-CCCCCEEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCEEEEEECCC------CEEEEEEECCCCCEEEEE
Q ss_conf 72889812-47874999998039999999994-99949999699991488995399------669999628999799999
Q 002801 650 SQVLTEMR-EHERRVWSIDFSSADPTLLASGS-DDGSVKLWSINQGVSIGTIKTKA------NVCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 650 ~~~~~~~~-~h~~~V~si~fsp~~~~~lasgs-~Dg~V~iwD~~~~~~i~~~~~~~------~v~~v~~~p~~~~~l~tg 721 (879)
.+...... .+...+..+.|+| +++++++++ .+..+.++|..+.+.+..+.... ......+ +..+...++.
T Consensus 195 ~~~~~~~~i~~g~~~~~~~~sp-dg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~ 272 (432)
T d1qksa2 195 LNNLKTTEISAERFLHDGGLDG-SHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVH-PTFGPVWATS 272 (432)
T ss_dssp SSEEEEEEEECCSSEEEEEECT-TSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEE-TTTEEEEEEE
T ss_pred CCCCEEEEECCCCCCCCCEECC-CCCEEEEECCCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEC-CCCCCEECCC
T ss_conf 8752279983367542653889-8879999516663677761445268887214862245676641014-8988310213
Q ss_pred E-CCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC------------------------------------CCCEEEEEE
Q ss_conf 6-799199998579960069981578878999974------------------------------------998899997
Q 002801 722 S-ADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV------------------------------------DATTLVSAS 764 (879)
Q Consensus 722 s-~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs------------------------------------~~~~l~sgs 764 (879)
. .++.|.+|+...... ..|...+....+. |++.+++++
T Consensus 273 ~lg~~~v~~~~~~~~~~-----~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~~~sv~vpDg~~la~~s 347 (432)
T d1qksa2 273 HMGDDSVALIGTDPEGH-----PDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDG 347 (432)
T ss_dssp BSSSSEEEEEECCTTTC-----TTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSS
T ss_pred CCCCCEEEECCCCCCCC-----CCCCCEEEEEEECCCCCEEEEEECCCCCCEEECCCCCCCCCEEEEEEEEECHHHCCCC
T ss_conf 56883587624566555-----4656577799886899768887268864102112678887703599999624610455
Q ss_pred CCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEE-----CCCCEEEEECCCCCCCEECC
Q ss_conf 699099995699964556876079718788679999931999999992-----99919998259999720003
Q 002801 765 TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGS-----ETNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 765 ~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs-----~Dg~v~iw~~~~~~~~~~~~ 832 (879)
.|+.+++|++... . .+..|...+..++|||+|++++... .++.|.|||..+.+....++
T Consensus 348 ~d~~~k~w~~~~~------~---~l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~~~i~ 411 (432)
T d1qksa2 348 SDPEFKTLPIAEW------A---GITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 411 (432)
T ss_dssp SCCCEEEECHHHH------H---TCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred CCCCEEECCCCCC------C---CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCEEEEEEC
T ss_conf 6784486334344------4---45789986897679899999999970488888868999999955886846
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.92 E-value=7.5e-24 Score=153.66 Aligned_cols=284 Identities=10% Similarity=-0.004 Sum_probs=192.7
Q ss_pred CCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEE-EEECCCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf 712404446816898504757978721353458999889999938999999-9958992999954864476764113417
Q 002801 534 SGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVV 612 (879)
Q Consensus 534 ~~~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~la-t~~~dg~I~iwd~~~~~~~~~~~~~~~~ 612 (879)
..++++..++.+.+||..+.++...++. .+...+.+++|+|||++++ ++..++.|.+||+.+....... .....
T Consensus 9 ~~l~~~~~~~~v~v~D~~t~~~~~t~~~----~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~-~~~~~ 83 (346)
T d1jmxb_ 9 EYMIVTNYPNNLHVVDVASDTVYKSCVM----PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA-NLSSV 83 (346)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC----SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ESCCS
T ss_pred CEEEEECCCCEEEEEECCCCCEEEEEEC----CCCCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCEEEEEE-CCCCC
T ss_conf 6999986999799999999989999994----899970459997898999999789993999967567131231-03654
Q ss_pred EECCCCCEEEEEEECCCCCEEEEEE------------CCCCEEEEECCCCEEEEEECC--CCCCEEEEEEECCCCCEEEE
Q ss_conf 7235898138998178999699960------------798299998688728898124--78749999980399999999
Q 002801 613 EMASRSKLSSICWNSYIKSQIASSN------------FEGVVQVWDVSRSQVLTEMRE--HERRVWSIDFSSADPTLLAS 678 (879)
Q Consensus 613 ~~~~~~~I~~i~~~~~~~~~l~s~~------------~dg~V~iwd~~t~~~~~~~~~--h~~~V~si~fsp~~~~~las 678 (879)
.......+..+.|++. +..++.+. .++.+.+|+..+++....+.. ....+..+.+++ ++..+++
T Consensus 84 ~~~~~~~~~~v~~s~D-G~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 161 (346)
T d1jmxb_ 84 PGEVGRSMYSFAISPD-GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD-DGSLYVA 161 (346)
T ss_dssp TTEEEECSSCEEECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT-TSCEEEE
T ss_pred CCCCCCCEEEEEEECC-CCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEECC-CCEEEEE
T ss_conf 3454774179999058-8889997057752156514676248998525632656887310247439999527-8789984
Q ss_pred EECCCCEEEEECCCCCEEEEEECCCCEEEEEEECCC-------------------------CCEEEEEECCCEEEEEECC
Q ss_conf 949994999969999148899539966999962899-------------------------9799999679919999857
Q 002801 679 GSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDS-------------------------GRSLAFGSADHRIYYYDLR 733 (879)
Q Consensus 679 gs~Dg~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~-------------------------~~~l~tgs~D~~I~iwDl~ 733 (879)
+ ..+.+|+..+++.+..+..+.....+.++|+. ...++++..+..+.+||+.
T Consensus 162 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (346)
T d1jmxb_ 162 G---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLK 238 (346)
T ss_dssp S---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETT
T ss_pred C---CCCEEEECCCCCEEEEEECCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCEEEEEECC
T ss_conf 7---9626998069978999964898662377125528999864998167651231112673257540478349999777
Q ss_pred CCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEE
Q ss_conf 9960069981578878999974-998899997699099995699964556876079718788679999931999999992
Q 002801 734 NSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGS 812 (879)
Q Consensus 734 ~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs 812 (879)
+..........|...+..+.++ ++..++.... +.+.+||..++ +.+..+. +...+.+++|+|||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~------~~~~~~~-~~~~~~~va~s~DG~~l~v~~ 310 (346)
T d1jmxb_ 239 TGKTHTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQR------KLIKAAN-LDHTYYCVAFDKKGDKLYLGG 310 (346)
T ss_dssp TCCEEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTT------EEEEEEE-CSSCCCEEEECSSSSCEEEES
T ss_pred CCCEEEEEEECCCCEEEEEEEECCCCEEEEECC-CEEEEEECCCC------CEEEEEC-CCCCEEEEEECCCCCEEEEEE
T ss_conf 883687876315660688897179978999429-83899989999------3999974-999778999968999999994
Q ss_pred CCCCEEEEECCCCCCCEECCCCC
Q ss_conf 99919998259999720003479
Q 002801 813 ETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 813 ~Dg~v~iw~~~~~~~~~~~~~~~ 835 (879)
.|+.|++||..+.+.+..++.+.
T Consensus 311 ~d~~v~v~D~~t~~~i~~i~~p~ 333 (346)
T d1jmxb_ 311 TFNDLAVFNPDTLEKVKNIKLPG 333 (346)
T ss_dssp BSSEEEEEETTTTEEEEEEECSS
T ss_pred CCCCEEEEECCCCCEEEEEECCC
T ss_conf 89929999996587979998899
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.92 E-value=2e-22 Score=145.15 Aligned_cols=271 Identities=14% Similarity=0.105 Sum_probs=193.2
Q ss_pred EEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEE-EEEECCCCEEEEECCCCEE
Q ss_conf 999389999999958992999954864476764113417723589813899817899969-9960798299998688728
Q 002801 574 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI-ASSNFEGVVQVWDVSRSQV 652 (879)
Q Consensus 574 i~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l-~s~~~dg~V~iwd~~t~~~ 652 (879)
++|+++++++++++.+++|.+||+.+... .....+.+...+.+++|+|. +.++ +++..++.|.+||+.+++.
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~~~------~~t~~~~~~~~p~~l~~spD-G~~l~v~~~~~~~v~~~d~~t~~~ 74 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASDTV------YKSCVMPDKFGPGTAMMAPD-NRTAYVLNNHYGDIYGIDLDTCKN 74 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEE------EEEEECSSCCSSCEEEECTT-SSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCCCCCCEEEEECCCCEEEEEECCCCCE------EEEEECCCCCCCCEEEECCC-CCEEEEEECCCCCEEEEECCCCEE
T ss_conf 55889996999986999799999999989------99999489997045999789-899999978999399996756713
Q ss_pred EEEECCCC------CCEEEEEEECCCCCEEEEEE------------CCCCEEEEECCCCCEEE---EEECCCCEEEEEEE
Q ss_conf 89812478------74999998039999999994------------99949999699991488---99539966999962
Q 002801 653 LTEMREHE------RRVWSIDFSSADPTLLASGS------------DDGSVKLWSINQGVSIG---TIKTKANVCCVQFP 711 (879)
Q Consensus 653 ~~~~~~h~------~~V~si~fsp~~~~~lasgs------------~Dg~V~iwD~~~~~~i~---~~~~~~~v~~v~~~ 711 (879)
+..+.... ..+..+.|+| +++.++.++ .+..+.+|+..++.... .......+..+.+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~v~~s~-DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (346)
T d1jmxb_ 75 TFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 153 (346)
T ss_dssp EEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEEC
T ss_pred EEEECCCCCCCCCCCCEEEEEEEC-CCCEEEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEEC
T ss_conf 123103654345477417999905-8888999705775215651467624899852563265688731024743999952
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCC---------------------E----EEEEEC-CCCEEEEEEC
Q ss_conf 8999799999679919999857996006998157887---------------------8----999974-9988999976
Q 002801 712 LDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKT---------------------V----SYVKFV-DATTLVSAST 765 (879)
Q Consensus 712 p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~---------------------V----~~i~fs-~~~~l~sgs~ 765 (879)
++ +.++++ +..+.+|++.+.+. +..+..+... + ....+. ....++++..
T Consensus 154 ~~-~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (346)
T d1jmxb_ 154 DD-GSLYVA---GPDIYKMDVKTGKY-TVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADL 228 (346)
T ss_dssp TT-SCEEEE---SSSEEEECTTTCCE-EEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEE
T ss_pred CC-CEEEEE---CCCCEEEECCCCCE-EEEEECCCCCCCEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCEEEEECCC
T ss_conf 78-789984---79626998069978-99996489866237712552899986499816765123111267325754047
Q ss_pred CCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCC
Q ss_conf 99099995699964556876079718788679999931999999992999199982599997200034799999999878
Q 002801 766 DNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETD 845 (879)
Q Consensus 766 D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (879)
+..+.+|++..+. .....+.++...+..+.+++++.+++.++. +.|.+|+...++.+..+..
T Consensus 229 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~d~~~~~~~~~~~~------------ 290 (346)
T d1jmxb_ 229 LYGYLSVDLKTGK-----THTQEFADLTELYFTGLRSPKDPNQIYGVL-NRLAKYDLKQRKLIKAANL------------ 290 (346)
T ss_dssp EEEEEEEETTTCC-----EEEEEEEECSSCEEEEEECSSCTTEEEEEE-SEEEEEETTTTEEEEEEEC------------
T ss_pred CCEEEEEECCCCC-----EEEEEEECCCCEEEEEEEECCCCEEEEECC-CEEEEEECCCCCEEEEECC------------
T ss_conf 8349999777883-----687876315660688897179978999429-8389998999939999749------------
Q ss_pred CCCCCEEEEEEECCCCCEEEEEECCCCEEEEEE
Q ss_conf 789979999990799939999937984999991
Q 002801 846 DAAQFISSVCWRGQSSNTLVAANSSGNIKILEM 878 (879)
Q Consensus 846 ~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw~l 878 (879)
...+.+++|+||+. .|++++.||.|+||++
T Consensus 291 --~~~~~~va~s~DG~-~l~v~~~d~~v~v~D~ 320 (346)
T d1jmxb_ 291 --DHTYYCVAFDKKGD-KLYLGGTFNDLAVFNP 320 (346)
T ss_dssp --SSCCCEEEECSSSS-CEEEESBSSEEEEEET
T ss_pred --CCCEEEEEECCCCC-EEEEEECCCCEEEEEC
T ss_conf --99778999968999-9999948992999999
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.89 E-value=2.7e-18 Score=120.71 Aligned_cols=271 Identities=9% Similarity=-0.043 Sum_probs=174.2
Q ss_pred CCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEC----------CCCEEEEECCCCCCCCCCCCCC
Q ss_conf 468168985047579787213534589998899999389999999958----------9929999548644767641134
Q 002801 541 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV----------NKKIKVFECDAIINENRDIHYP 610 (879)
Q Consensus 541 ~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~----------dg~I~iwd~~~~~~~~~~~~~~ 610 (879)
..+.+.+|+..+.++...+..+. . ..+.|+|||+++++++. ++.|.+||..+...........
T Consensus 45 ~~~~v~v~D~~tg~~~~~~~~~~-----~--~~~a~SpDG~~l~va~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~ 117 (373)
T d2madh_ 45 AIIQQWVLDAGSGSILGHVNGGF-----L--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD 117 (373)
T ss_pred CCCEEEEEECCCCCEEEEEECCC-----C--CCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCC
T ss_conf 87659999899997999995798-----8--6079868999899996057753212453189999777893888972688
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEE--ECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 17723589813899817899969996--0798299998688728898124787499999803999999999499949999
Q 002801 611 VVEMASRSKLSSICWNSYIKSQIASS--NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLW 688 (879)
Q Consensus 611 ~~~~~~~~~I~~i~~~~~~~~~l~s~--~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iw 688 (879)
............+.|++. +..++.. ..++.+.+|+....+..... ....++.++|.....+++.+.|+.+.+|
T Consensus 118 ~~~~~~~~~~~~~~~s~d-g~~~~v~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~g~~~~v~~~~dg~~~~~ 192 (373)
T d2madh_ 118 APRFDVGPYSWMNANTPN-NADLLFFQFAAGPAVGLVVQGGSSDDQLL----SSPTCYHIHPGAPSTFYLLCAQGGLAKT 192 (373)
T ss_pred CCEEEECCCCCCEEEEEC-CCCEEEEEECCCCCEEEEECCCCEEEEEE----CCCEEEEEECCCCCEEEEECCCCEEEEE
T ss_conf 513685168970899858-99379999869874677623687289982----4520699962899199999479939999
Q ss_pred ECCCCCEEEEEECC-----CC--EEEEEEECCCCCEEEEEECCCEEEEEECCCCCEE-EEEECCCCCC----------EE
Q ss_conf 69999148899539-----96--6999962899979999967991999985799600-6998157887----------89
Q 002801 689 SINQGVSIGTIKTK-----AN--VCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIP-LCTLIGHNKT----------VS 750 (879)
Q Consensus 689 D~~~~~~i~~~~~~-----~~--v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~-~~~~~~h~~~----------V~ 750 (879)
+...+......... .. ...+.+.++ ..++..+.++.+++|+....... ......+... ..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (373)
T d2madh_ 193 DHAGGAAGAGLVGAMLTAAQNLLTQPAQANKS--GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQ 270 (373)
T ss_pred ECCCCEEEEEEEEECCCCCCCCEEEEEEECCC--CEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCE
T ss_conf 74774266788630036675304345887899--4299925896599997689907897763056475786641367413
Q ss_pred EEEEC-----------CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC--EEEEEECCCCE
Q ss_conf 99974-----------998899997699099995699964556876079718788679999931999--99999299919
Q 002801 751 YVKFV-----------DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG--YVATGSETNEV 817 (879)
Q Consensus 751 ~i~fs-----------~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~--~lasgs~Dg~v 817 (879)
.+.++ ++..+++...++.+.+||+.++ +.+..+. +...+..++|+|||+ ++++++.|+.|
T Consensus 271 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~------~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v 343 (373)
T d2madh_ 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG------QTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred EEEEECCCCEEEEECCCCCEEEEECCCCEEEEEECCCC------CEEEEEC-CCCCEEEEEECCCCCEEEEEEECCCCEE
T ss_conf 35771499759995488824786258986999989999------6989866-8998258999989998999996799929
Q ss_pred EEEECCCCCCCEECC
Q ss_conf 998259999720003
Q 002801 818 FVYHKAFPMPALSFN 832 (879)
Q Consensus 818 ~iw~~~~~~~~~~~~ 832 (879)
++||..+++.+.++.
T Consensus 344 ~v~D~~tg~~~~~~~ 358 (373)
T d2madh_ 344 HIYDAGAGDQDQSTV 358 (373)
T ss_pred EEEECCCCCEEEEEC
T ss_conf 999999998999988
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=1.5e-18 Score=122.20 Aligned_cols=277 Identities=11% Similarity=0.077 Sum_probs=181.9
Q ss_pred CEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 12404446816898504757978721353458999889999938999999995-89929999548644767641134177
Q 002801 535 GWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVE 613 (879)
Q Consensus 535 ~~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~-~dg~I~iwd~~~~~~~~~~~~~~~~~ 613 (879)
-++++..++.|++|++........++ ...|.+.|.+++|+|||++|++++ .|+.|++|++...... ......
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~l~~~~---~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~----~~~~~~ 78 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGALTLTQ---VVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA----LTFAAE 78 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEE---EEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC----EEEEEE
T ss_pred EEEECCCCCCEEEEEECCCCCEEEEE---EECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEECCCCC----EEEEEE
T ss_conf 99987899938999983999769999---97579988689995897999999778996999999689870----798530
Q ss_pred ECCCCCEEEEEEECCCCCEEEEEEC-CCCEEEEECCCCEEEEE--ECCCCCCEEEEEEECCCCCEEEEEE-CCCCEEEEE
Q ss_conf 2358981389981789996999607-98299998688728898--1247874999998039999999994-999499996
Q 002801 614 MASRSKLSSICWNSYIKSQIASSNF-EGVVQVWDVSRSQVLTE--MREHERRVWSIDFSSADPTLLASGS-DDGSVKLWS 689 (879)
Q Consensus 614 ~~~~~~I~~i~~~~~~~~~l~s~~~-dg~V~iwd~~t~~~~~~--~~~h~~~V~si~fsp~~~~~lasgs-~Dg~V~iwD 689 (879)
......+..++|+|. +++|++++. ++.|.+|+......... ...+...+.++.++| +++.++.++ .+..+.+|+
T Consensus 79 ~~~~~~p~~l~~spD-g~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~-d~~~~~~~~~~~~~i~~~~ 156 (333)
T d1ri6a_ 79 SALPGSLTHISTDHQ-GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISP-DNRTLWVPALKQDRICLFT 156 (333)
T ss_dssp EECSSCCSEEEECTT-SSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECT-TSSEEEEEEGGGTEEEEEE
T ss_pred CCCCCCCEEEEECCC-CCEEEECCCCCCCEEEECCCCCCCEECCCCCCCCCCCEEEEEEE-CCEEEECCCCCCCEEEEEE
T ss_conf 136998549999599-98874205688830220011100000010037785314988630-1013102565542056897
Q ss_pred CCCCCEEEEEE-------CCCCEEEEEEECCCCCEEEE-EECCCEEEEEECCCCCEEE---EEEC------CCCCCEEEE
Q ss_conf 99991488995-------39966999962899979999-9679919999857996006---9981------578878999
Q 002801 690 INQGVSIGTIK-------TKANVCCVQFPLDSGRSLAF-GSADHRIYYYDLRNSKIPL---CTLI------GHNKTVSYV 752 (879)
Q Consensus 690 ~~~~~~i~~~~-------~~~~v~~v~~~p~~~~~l~t-gs~D~~I~iwDl~~~~~~~---~~~~------~h~~~V~~i 752 (879)
........... .......+.|+++ +..++. ....+...+|+........ .... ........+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T d1ri6a_ 157 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN-EQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 235 (333)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTT-SSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred ECCCCCCEEEECEEEEEECCCCCCEEEEECC-CEEEEEECCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEE
T ss_conf 3268741001000133403887527999602-014786204667217885103555202100223430687765531268
Q ss_pred EEC-CCCEEEE-EECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEE-CCCCEEEEECCC
Q ss_conf 974-9988999-97699099995699964556876079718788679999931999999992-999199982599
Q 002801 753 KFV-DATTLVS-ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGS-ETNEVFVYHKAF 824 (879)
Q Consensus 753 ~fs-~~~~l~s-gs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs-~Dg~v~iw~~~~ 824 (879)
.++ ++++++. +..++.+.+|++...... ..+............++|+|+|++|++++ .++.|.+|++..
T Consensus 236 ~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~a~spDGk~l~va~~~~~~v~v~~id~ 307 (333)
T d1ri6a_ 236 HITPDGRHLYACDRTASLITVFSVSEDGSV---LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 307 (333)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCC---EEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred EEECCCCCEEEECCCCCEEEEEEECCCCCE---EEEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEEEEEC
T ss_conf 995156720550456882787887399978---999999678997628999079899999988999399999979
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.88 E-value=1.6e-17 Score=116.19 Aligned_cols=280 Identities=9% Similarity=-0.010 Sum_probs=184.1
Q ss_pred CCCCCEEEEEECCCCCEEEEEE-----CCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEE---
Q ss_conf 8999889999938999999995-----89929999548644767641134177235898138998178999699960---
Q 002801 566 NSSNLVCSLSFDRDGELFAAAG-----VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--- 637 (879)
Q Consensus 566 ~h~~~V~si~fspdg~~lat~~-----~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~--- 637 (879)
.+..++.+++++|||+.++... ..+.+.+||..+.... ..+ .......+.|+|. +..++++.
T Consensus 18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~--------~~~-~~~~~~~~a~SpD-G~~l~va~~~~ 87 (373)
T d2madh_ 18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL--------GHV-NGGFLPNPVAAHS-GSEFALASTSF 87 (373)
T ss_pred CCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCEE--------EEE-ECCCCCCEEECCC-CCEEEEEEECC
T ss_conf 6789865630189997899973422578765999989999799--------999-5798860798689-99899996057
Q ss_pred -------CCCCEEEEECCCCEEEEEECCCCCCE-------EEEEEECCCCCEEEEE--ECCCCEEEEECCCCCEEEEEEC
Q ss_conf -------79829999868872889812478749-------9999803999999999--4999499996999914889953
Q 002801 638 -------FEGVVQVWDVSRSQVLTEMREHERRV-------WSIDFSSADPTLLASG--SDDGSVKLWSINQGVSIGTIKT 701 (879)
Q Consensus 638 -------~dg~V~iwd~~t~~~~~~~~~h~~~V-------~si~fsp~~~~~lasg--s~Dg~V~iwD~~~~~~i~~~~~ 701 (879)
.++.|.+||..+++.+..+..+.... ..+.|++ +++.++.. ..++.+.+|+....+.....
T Consensus 88 ~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~-- 164 (373)
T d2madh_ 88 SRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVVQGGSSDDQLL-- 164 (373)
T ss_pred CCCCCCCCCEEEEEEECCCCCEEEEEECCCCCEEEECCCCCCEEEEE-CCCCEEEEEECCCCCEEEEECCCCEEEEEE--
T ss_conf 75321245318999977789388897268851368516897089985-899379999869874677623687289982--
Q ss_pred CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECC------CCCCEEEEEECCCCEEEEEECCCCEEEEECC
Q ss_conf 9966999962899979999967991999985799600699815------7887899997499889999769909999569
Q 002801 702 KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG------HNKTVSYVKFVDATTLVSASTDNTLKLWDLS 775 (879)
Q Consensus 702 ~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~------h~~~V~~i~fs~~~~l~sgs~D~~i~iwd~~ 775 (879)
....++.++|+....+++.+.|+.+.+|+...... ...... .......+.+..+..++..+.++.+.+|+..
T Consensus 165 -~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 242 (373)
T d2madh_ 165 -SSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAA-GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADIS 242 (373)
T ss_pred -CCCEEEEEECCCCCEEEEECCCCEEEEEECCCCEE-EEEEEEECCCCCCCCEEEEEEECCCCEEEEECCCCEEEEEECC
T ss_conf -45206999628991999994799399997477426-6788630036675304345887899429992589659999768
Q ss_pred CCCCCCCCCCEEEEECC----------CCCEEEEEEECCCC----------EEEEEECCCCEEEEECCCCCCCEECCCCC
Q ss_conf 99645568760797187----------88679999931999----------99999299919998259999720003479
Q 002801 776 MCTSRVIDTPLHSFTGH----------TNVKNFVGLSVWDG----------YVATGSETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 776 ~~~~~~~~~~~~~~~~h----------~~~v~~v~~sp~~~----------~lasgs~Dg~v~iw~~~~~~~~~~~~~~~ 835 (879)
..... .+.....+ ......+++++++. .++....++.+.+|+...++.+..+.
T Consensus 243 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~--- 315 (373)
T d2madh_ 243 AAGAT----NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS--- 315 (373)
T ss_pred CCEEE----EEEEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEEC---
T ss_conf 99078----97763056475786641367413357714997599954888247862589869999899996989866---
Q ss_pred CCCCCCCCCCCCCCCEEEEEEECCCCCE-EEEEECCCCEEEEEE
Q ss_conf 9999999878789979999990799939-999937984999991
Q 002801 836 ADPLSGPETDDAAQFISSVCWRGQSSNT-LVAANSSGNIKILEM 878 (879)
Q Consensus 836 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~-l~s~~~Dg~I~iw~l 878 (879)
+...+.+++|+||++.+ +++++.|+.|+||++
T Consensus 316 -----------~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~ 348 (373)
T d2madh_ 316 -----------LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDA 348 (373)
T ss_pred -----------CCCCEEEEEECCCCCEEEEEEECCCCEEEEEEC
T ss_conf -----------899825899998999899999679992999999
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=2e-18 Score=121.49 Aligned_cols=276 Identities=11% Similarity=0.114 Sum_probs=183.8
Q ss_pred EEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEE-EEECCCCEEEEECCCCEEEEEE---C
Q ss_conf 99999589929999548644767641134177235898138998178999699-9607982999986887288981---2
Q 002801 582 LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVWDVSRSQVLTEM---R 657 (879)
Q Consensus 582 ~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~-s~~~dg~V~iwd~~t~~~~~~~---~ 657 (879)
.+++++.|++|++|+++.... ...+....+...+.+++|+|. +++|+ ++..|+.|.+|++........+ .
T Consensus 6 v~v~~~~~~~I~v~~~~~~~~-----l~~~~~~~~~~~v~~la~spD-G~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~ 79 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEGA-----LTLTQVVDVPGQVQPMVVSPD-KRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 79 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSC-----EEEEEEEECSSCCCCEEECTT-SSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred EEEECCCCCCEEEEEECCCCC-----EEEEEEECCCCCEEEEEEECC-CCEEEEEECCCCEEEEEEEECCCCCEEEEEEC
T ss_conf 999878999389999839997-----699999757998868999589-79999997789969999996898707985301
Q ss_pred CCCCCEEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCEEEEEE---CCCCEEEEEEECCCCCEEEEEEC-CCEEEEEEC
Q ss_conf 478749999980399999999949-9949999699991488995---39966999962899979999967-991999985
Q 002801 658 EHERRVWSIDFSSADPTLLASGSD-DGSVKLWSINQGVSIGTIK---TKANVCCVQFPLDSGRSLAFGSA-DHRIYYYDL 732 (879)
Q Consensus 658 ~h~~~V~si~fsp~~~~~lasgs~-Dg~V~iwD~~~~~~i~~~~---~~~~v~~v~~~p~~~~~l~tgs~-D~~I~iwDl 732 (879)
.+...++.+.|+| +++++++++. ++.|.+|+........... +...+.++.++|+ ++++++++. +..+.+|+.
T Consensus 80 ~~~~~p~~l~~sp-Dg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d-~~~~~~~~~~~~~i~~~~~ 157 (333)
T d1ri6a_ 80 ALPGSLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPD-NRTLWVPALKQDRICLFTV 157 (333)
T ss_dssp ECSSCCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTT-SSEEEEEEGGGTEEEEEEE
T ss_pred CCCCCCEEEEECC-CCCEEEECCCCCCCEEEECCCCCCCEECCCCCCCCCCCEEEEEEEC-CEEEECCCCCCCEEEEEEE
T ss_conf 3699854999959-9988742056888302200111000000100377853149886301-0131025655420568973
Q ss_pred CCCCEEEEE-----ECCCCCCEEEEEEC-CCCEEEEEE-CCCCEEEEECCCCCCCCCCCCEEEEE------CCCCCEEEE
Q ss_conf 799600699-----81578878999974-998899997-69909999569996455687607971------878867999
Q 002801 733 RNSKIPLCT-----LIGHNKTVSYVKFV-DATTLVSAS-TDNTLKLWDLSMCTSRVIDTPLHSFT------GHTNVKNFV 799 (879)
Q Consensus 733 ~~~~~~~~~-----~~~h~~~V~~i~fs-~~~~l~sgs-~D~~i~iwd~~~~~~~~~~~~~~~~~------~h~~~v~~v 799 (879)
......... ..........+.|+ ++..++... ..+...+|++....... ....... ........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 235 (333)
T d1ri6a_ 158 SDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI--ECVQTLDMMPENFSDTRWAADI 235 (333)
T ss_dssp CTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCC--EEEEEEECSCTTCCSCCCEEEE
T ss_pred CCCCCCEEEECEEEEEECCCCCCEEEEECCCEEEEEECCCCCCEEEEEECCCCCCE--EEEEEEEEEECCCCCCCCCEEE
T ss_conf 26874100100013340388752799960201478620466721788510355520--2100223430687765531268
Q ss_pred EEECCCCEEE-EEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEC-CCCEEEEE
Q ss_conf 9931999999-992999199982599997200034799999999878789979999990799939999937-98499999
Q 002801 800 GLSVWDGYVA-TGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANS-SGNIKILE 877 (879)
Q Consensus 800 ~~sp~~~~la-sgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~-Dg~I~iw~ 877 (879)
.+++++++++ ++..++.+.+|.+............ ......+.+++|+|+++ +|++++. ++.|++|+
T Consensus 236 ~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~p~~~a~spDGk-~l~va~~~~~~v~v~~ 304 (333)
T d1ri6a_ 236 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGF----------QPTETQPRGFNVDHSGK-YLIAAGQKSHHISVYE 304 (333)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEE----------EECSSSCCCEEECTTSS-EEEEECTTTCEEEEEE
T ss_pred EEECCCCCEEEECCCCCEEEEEEECCCCCEEEEEEE----------ECCCCCEEEEEEECCCC-EEEEEECCCCEEEEEE
T ss_conf 995156720550456882787887399978999999----------67899762899907989-9999988999399999
Q ss_pred E
Q ss_conf 1
Q 002801 878 M 878 (879)
Q Consensus 878 l 878 (879)
+
T Consensus 305 i 305 (333)
T d1ri6a_ 305 I 305 (333)
T ss_dssp E
T ss_pred E
T ss_conf 9
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.84 E-value=1.4e-18 Score=122.38 Aligned_cols=273 Identities=11% Similarity=0.020 Sum_probs=174.4
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEE----------CCCCEEEEECCCCCCCCCCCCC
Q ss_conf 446816898504757978721353458999889999938999999995----------8992999954864476764113
Q 002801 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHY 609 (879)
Q Consensus 540 ~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~----------~dg~I~iwd~~~~~~~~~~~~~ 609 (879)
...+.+.+|+..+.++.+.+..+. +..++|+|||+++++++ .++.|.+||..+..........
T Consensus 25 ~~~~~v~v~D~~tg~~~~~~~~g~-------~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~~~~~ 97 (355)
T d2bbkh_ 25 AAVTQQFVIDGEAGRVIGMIDGGF-------LPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELP 97 (355)
T ss_dssp CSSEEEEEEETTTTEEEEEEEECS-------SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEEECCC-------CCCEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEECC
T ss_conf 776719999999994999998999-------9856994899999999677764201589998999999999798898058
Q ss_pred CEEEECCCCCEEEEEEECCCCCEEEEE--ECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEE
Q ss_conf 417723589813899817899969996--079829999868872889812478749999980399999999949994999
Q 002801 610 PVVEMASRSKLSSICWNSYIKSQIASS--NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKL 687 (879)
Q Consensus 610 ~~~~~~~~~~I~~i~~~~~~~~~l~s~--~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~i 687 (879)
.............+.|++. +..++.. +.+..+.+|+..+++.+..+..+.... .+.. .....+..+.|+...+
T Consensus 98 ~~~~~~~~~~~~~~~~s~d-g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~dg~~~~ 172 (355)
T d2bbkh_ 98 DAPRFLVGTYPWMTSLTPD-GKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH---IFPT-APDTFFMHCRDGSLAK 172 (355)
T ss_dssp TCCCCCBSCCGGGEEECTT-SSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE---EEEE-ETTEEEEEETTSCEEE
T ss_pred CCCEEECCCCCCEEEEECC-CCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCE---EEEC-CCCCEEEECCCCCEEE
T ss_conf 8640311798734999338-871577327988204543057883766770587404---7306-9963699938999899
Q ss_pred EECCCCCEEEEEEC-------CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEE-EEECCCC----------CCE
Q ss_conf 96999914889953-------99669999628999799999679919999857996006-9981578----------878
Q 002801 688 WSINQGVSIGTIKT-------KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPL-CTLIGHN----------KTV 749 (879)
Q Consensus 688 wD~~~~~~i~~~~~-------~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~-~~~~~h~----------~~V 749 (879)
+.......+..+.. ...+....+.+. +..+++++.++.+++|++....... .....+. ...
T Consensus 173 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 251 (355)
T d2bbkh_ 173 VAFGTEGTPEITHTEVFHPEDEFLINHPAYSQK-AGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGW 251 (355)
T ss_dssp EECCSSSCCEEEECCCCSCTTSCBCSCCEEETT-TTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSS
T ss_pred EEECCCCEEEEEECCCCCCEECCEEEECCCCCC-CCEEEEECCCCEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCE
T ss_conf 983478737999624333000110610215389-9738874699829999658990799844578441268543303510
Q ss_pred EEEEEC-CCCEEEEEECC----------CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC--EEEEEECCCC
Q ss_conf 999974-99889999769----------9099995699964556876079718788679999931999--9999929991
Q 002801 750 SYVKFV-DATTLVSASTD----------NTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG--YVATGSETNE 816 (879)
Q Consensus 750 ~~i~fs-~~~~l~sgs~D----------~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~--~lasgs~Dg~ 816 (879)
..+.++ ++..++..+.+ +.|.+||..++ +.+..+.. ...+.+++|+|+|+ ++++++.|+.
T Consensus 252 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~------~~~~~~~~-~~~~~~~a~spDG~~~l~v~~~~d~~ 324 (355)
T d2bbkh_ 252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG------ERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKT 324 (355)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC------CEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTE
T ss_pred EEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCC------CEEEEECC-CCCEEEEEECCCCCEEEEEEECCCCE
T ss_conf 899980799767887406871265179975999867888------49899668-99877999928999699999789998
Q ss_pred EEEEECCCCCCCEECC
Q ss_conf 9998259999720003
Q 002801 817 VFVYHKAFPMPALSFN 832 (879)
Q Consensus 817 v~iw~~~~~~~~~~~~ 832 (879)
|++||..+++.+.++.
T Consensus 325 i~v~D~~tg~~~~~i~ 340 (355)
T d2bbkh_ 325 LYIHDAESGEELRSVN 340 (355)
T ss_dssp EEEEETTTCCEEEEEC
T ss_pred EEEEECCCCCEEEEEE
T ss_conf 9999999998999992
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.82 E-value=2.2e-18 Score=121.22 Aligned_cols=276 Identities=12% Similarity=0.010 Sum_probs=171.0
Q ss_pred EEEEEECCCCCEEEEEE-----CCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEE---------
Q ss_conf 89999938999999995-----8992999954864476764113417723589813899817899969996---------
Q 002801 571 VCSLSFDRDGELFAAAG-----VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS--------- 636 (879)
Q Consensus 571 V~si~fspdg~~lat~~-----~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~--------- 636 (879)
+...+.+||++.++... .+..|.+||..+... +... ..+....++|+|. ++.|+..
T Consensus 4 ~~~~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg~~--------~~~~-~~g~~~~~a~SpD-g~~l~v~~~~~~~~~~ 73 (355)
T d2bbkh_ 4 RILEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV--------IGMI-DGGFLPNPVVADD-GSFIAHASTVFSRIAR 73 (355)
T ss_dssp CBCCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE--------EEEE-EECSSCEEEECTT-SSCEEEEEEEEEETTE
T ss_pred CEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCE--------EEEE-ECCCCCCEEECCC-CCEEEEEECCCCCCCC
T ss_conf 1747658999999998266477767199999999949--------9999-8999985699489-9999999677764201
Q ss_pred -ECCCCEEEEECCCCEEEEEECCCC-------CCEEEEEEECCCCCEEEEEE--CCCCEEEEECCCCCEEEEEECCCCEE
Q ss_conf -079829999868872889812478-------74999998039999999994--99949999699991488995399669
Q 002801 637 -NFEGVVQVWDVSRSQVLTEMREHE-------RRVWSIDFSSADPTLLASGS--DDGSVKLWSINQGVSIGTIKTKANVC 706 (879)
Q Consensus 637 -~~dg~V~iwd~~t~~~~~~~~~h~-------~~V~si~fsp~~~~~lasgs--~Dg~V~iwD~~~~~~i~~~~~~~~v~ 706 (879)
..++.|.+||..+++....+..+. .....+.|++ ++..++..+ .+..+.+|+..+++.+..+.......
T Consensus 74 g~~d~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (355)
T d2bbkh_ 74 GERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYH 152 (355)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCCCEEECCCCCCEEEEEC-CCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCE
T ss_conf 589998999999999798898058864031179873499933-8871577327988204543057883766770587404
Q ss_pred EEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE-E----CCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCC
Q ss_conf 99962899979999967991999985799600699-8----1578878999974-9988999976990999956999645
Q 002801 707 CVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCT-L----IGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSR 780 (879)
Q Consensus 707 ~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~-~----~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~ 780 (879)
..... ....+..+.|+...++........... . ..+...+....+. ++..++.++.++.+.+|++......
T Consensus 153 ~~~~~---~~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 229 (355)
T d2bbkh_ 153 IFPTA---PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAK 229 (355)
T ss_dssp EEEEE---TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCE
T ss_pred EEECC---CCCEEEECCCCCEEEEEECCCCEEEEEECCCCCCEECCEEEECCCCCCCCEEEEECCCCEEEEEECCCCCEE
T ss_conf 73069---963699938999899983478737999624333000110610215389973887469982999965899079
Q ss_pred CCCCCEEEEECCC----------CCEEEEEEECCCCEEEEEECC----------CCEEEEECCCCCCCEECCCCCCCCCC
Q ss_conf 5687607971878----------867999993199999999299----------91999825999972000347999999
Q 002801 781 VIDTPLHSFTGHT----------NVKNFVGLSVWDGYVATGSET----------NEVFVYHKAFPMPALSFNFNHADPLS 840 (879)
Q Consensus 781 ~~~~~~~~~~~h~----------~~v~~v~~sp~~~~lasgs~D----------g~v~iw~~~~~~~~~~~~~~~~~~~~ 840 (879)
.+.....+. .....+++++++..++..+.+ +.|.+|+...++.+..+..
T Consensus 230 ----~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~~~~~~~~~------- 298 (355)
T d2bbkh_ 230 ----FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM------- 298 (355)
T ss_dssp ----ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-------
T ss_pred ----EEECCCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCEEECCCCCEEEEEECCCCCEEEEECC-------
T ss_conf ----984457844126854330351089998079976788740687126517997599986788849899668-------
Q ss_pred CCCCCCCCCCEEEEEEECCCCCE-EEEEECCCCEEEEEE
Q ss_conf 99878789979999990799939-999937984999991
Q 002801 841 GPETDDAAQFISSVCWRGQSSNT-LVAANSSGNIKILEM 878 (879)
Q Consensus 841 ~~~~~~h~~~V~~v~~~p~~~~~-l~s~~~Dg~I~iw~l 878 (879)
...+.+++|+|+++.+ +++++.|+.|.||++
T Consensus 299 -------~~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~ 330 (355)
T d2bbkh_ 299 -------GHEIDSINVSQDEKPLLYALSTGDKTLYIHDA 330 (355)
T ss_dssp -------EEEECEEEECCSSSCEEEEEETTTTEEEEEET
T ss_pred -------CCCEEEEEECCCCCEEEEEEECCCCEEEEEEC
T ss_conf -------99877999928999699999789998999999
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.74 E-value=2.6e-14 Score=97.09 Aligned_cols=310 Identities=10% Similarity=0.018 Sum_probs=173.1
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEC---------CCCEEEEECCCCCCCCCCCCCC
Q ss_conf 4468168985047579787213534589998899999389999999958---------9929999548644767641134
Q 002801 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYP 610 (879)
Q Consensus 540 ~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~---------dg~I~iwd~~~~~~~~~~~~~~ 610 (879)
..++.+.+|+..+.+....+....+..|...|.++.|+|||++||.+.. ++.+.||++.+.....
T Consensus 33 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~------ 106 (470)
T d2bgra1 33 KQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT------ 106 (470)
T ss_dssp ESSSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------
T ss_pred ECCCCEEEEECCCCCEEEEECHHHHHHCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCCC------
T ss_conf 75994999988999789997015644316765405998988979999777100010467349999898885131------
Q ss_pred EEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCC------------------CCCEEEEEEECCC
Q ss_conf 1772358981389981789996999607982999986887288981247------------------8749999980399
Q 002801 611 VVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREH------------------ERRVWSIDFSSAD 672 (879)
Q Consensus 611 ~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h------------------~~~V~si~fsp~~ 672 (879)
...+...+..+.|+|. +..|+... ++.+.+|+..+++.......+ ......+.|+| |
T Consensus 107 --l~~~~~~~~~~~~SPD-G~~ia~~~-~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSP-D 181 (470)
T d2bgra1 107 --EERIPNNTQWVTWSPV-GHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-N 181 (470)
T ss_dssp --SSCCCTTEEEEEECSS-TTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-T
T ss_pred --CCCCCCCCCCCCCCCC-CCEEEEEE-CCCCEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCEECC-C
T ss_conf --2468742310101467-64135751-46413798899946532101477740535432011210047765307999-9
Q ss_pred CCEEEEEECCCC-EEEEEC---CCC----CE-----------------EEEEEC-----------------------CCC
Q ss_conf 999999949994-999969---999----14-----------------889953-----------------------996
Q 002801 673 PTLLASGSDDGS-VKLWSI---NQG----VS-----------------IGTIKT-----------------------KAN 704 (879)
Q Consensus 673 ~~~lasgs~Dg~-V~iwD~---~~~----~~-----------------i~~~~~-----------------------~~~ 704 (879)
|+.++....|.+ |..|.+ ... .. +..+.. ...
T Consensus 182 Gk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (470)
T d2bgra1 182 GTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHY 261 (470)
T ss_dssp SSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCSSSCCCEEEECCCHHHHTSCEE
T ss_pred CCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCE
T ss_conf 87220268637767069987660477788713540366545468862579999888614552033224786334789866
Q ss_pred EEEEEEECCCCCEEEEE-ECCC---E--EEEEECCCCCEEEEEE-------------CCCCCCEEEEEEC-CCCEEEEEE
Q ss_conf 69999628999799999-6799---1--9999857996006998-------------1578878999974-998899997
Q 002801 705 VCCVQFPLDSGRSLAFG-SADH---R--IYYYDLRNSKIPLCTL-------------IGHNKTVSYVKFV-DATTLVSAS 764 (879)
Q Consensus 705 v~~v~~~p~~~~~l~tg-s~D~---~--I~iwDl~~~~~~~~~~-------------~~h~~~V~~i~fs-~~~~l~sgs 764 (879)
+..+.|.++ +..++.. .... . +..+|..++.. .... ..+........+. ++.+++.+.
T Consensus 262 ~~~~~w~~~-~~~~~~~~~r~~~~~~~~~~~~d~~tg~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~s~ 339 (470)
T d2bgra1 262 LCDVTWATQ-ERISLQWLRRIQNYSVMDICDYDESSGRW-NCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISN 339 (470)
T ss_dssp EEEEEEEET-TEEEEEEEESSTTEEEEEEEEEETTTTEE-EECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEEC
T ss_pred EEEEEECCC-CCEEEEEEECCCCCEEEEEEEECCCCCCE-EEEEEEEEEEEECCCEEECCCCCCCEEEECCCCCEEEEEC
T ss_conf 778887687-83347873046881599999961888947-8999875146621433531357772454237884798743
Q ss_pred CCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEE-EEEECCC----CEEEEECC--CCCCCEECCCCCCC
Q ss_conf 69909999569996455687607971878867999993199999-9992999----19998259--99972000347999
Q 002801 765 TDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYV-ATGSETN----EVFVYHKA--FPMPALSFNFNHAD 837 (879)
Q Consensus 765 ~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-asgs~Dg----~v~iw~~~--~~~~~~~~~~~~~~ 837 (879)
.|+..+||.+.... .....+..+...+..+ ++++++.+ ++++.++ .-.+|.+. .+.....+.
T Consensus 340 ~dg~~~ly~~~~~g-----~~~~~lt~g~~~v~~~-~~~d~~~iyf~a~~~~~~p~~~~ly~v~~~g~~~~~~lt----- 408 (470)
T d2bgra1 340 EEGYRHICYFQIDK-----KDCTFITKGTWEVIGI-EALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLS----- 408 (470)
T ss_dssp TTSCEEEEEEETTC-----SCCEESCCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEETTCTTCEEESS-----
T ss_pred CCCCCEEEEEECCC-----CCEEEECCCCEEEEEE-EEECCCEEEEEEECCCCCCCEEEEEEEECCCCCCEEEEC-----
T ss_conf 67576459995268-----7304511698048787-897799999999568998351799999888998605703-----
Q ss_pred CCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC--CEEEEE
Q ss_conf 9999987878997999999079993999993798--499999
Q 002801 838 PLSGPETDDAAQFISSVCWRGQSSNTLVAANSSG--NIKILE 877 (879)
Q Consensus 838 ~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg--~I~iw~ 877 (879)
....+|...+.+++|+|++.+++.+++... .+.+|+
T Consensus 409 ----~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~ 446 (470)
T d2bgra1 409 ----CELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHS 446 (470)
T ss_dssp ----TTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEE
T ss_pred ----CCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEE
T ss_conf ----54358889879999998999999983289998199999
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.66 E-value=4.7e-15 Score=101.46 Aligned_cols=274 Identities=9% Similarity=-0.032 Sum_probs=167.0
Q ss_pred CCCCCC--EEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEE----------CCCCEEEEECCCCCCCCCC
Q ss_conf 444681--6898504757978721353458999889999938999999995----------8992999954864476764
Q 002801 539 PFLEGL--CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRD 606 (879)
Q Consensus 539 ~~~d~~--i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~----------~dg~I~iwd~~~~~~~~~~ 606 (879)
...++. +.+|+..+.++...+..+ ... .+.|+|||+.+++++ .|+.|.+||..+.......
T Consensus 40 ~~~~g~~~~~~~d~~~~~~~~~~~~~-----~~~--~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~~~~~i 112 (368)
T d1mdah_ 40 AYFAGTTENWVSCAGCGVTLGHSLGA-----FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADI 112 (368)
T ss_dssp TTTCSSEEEEEEETTTTEEEEEEEEC-----TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEE
T ss_pred CCCCCCCEEEEEECCCCCEEEEEECC-----CCC--CCEECCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEE
T ss_conf 45788621799708998377888578-----777--51398999889997556764010356786999989999383064
Q ss_pred CCCCEEEECCCCCEEEEEEECCCCCEEEEEE-CCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCE
Q ss_conf 1134177235898138998178999699960-798299998688728898124787499999803999999999499949
Q 002801 607 IHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSV 685 (879)
Q Consensus 607 ~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~-~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V 685 (879)
................+.|++. +.+++.+. .++.+.+||+.+.+....+..+..... .+.....++..+.||++
T Consensus 113 ~~p~~~~~~~g~~p~~~a~SpD-Gk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~Dg~~ 187 (368)
T d1mdah_ 113 ELPDAPRFSVGPRVHIIGNCAS-SACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHI----HPGAAATHYLGSCPASL 187 (368)
T ss_dssp EETTSCSCCBSCCTTSEEECTT-SSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCC----EEEETTEEECCCCTTSC
T ss_pred CCCCCCEECCCCCCCCEEECCC-CCEEEEEECCCCEEEEEECCCCCEEEEEECCCCCEE----CCCCCCEEEEECCCCCE
T ss_conf 3785421024688640588789-989999968998599998998938678604675237----46998239999489988
Q ss_pred EEEECCCCCEEEEEEC-------CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE-ECCCC----------C
Q ss_conf 9996999914889953-------9966999962899979999967991999985799600699-81578----------8
Q 002801 686 KLWSINQGVSIGTIKT-------KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCT-LIGHN----------K 747 (879)
Q Consensus 686 ~iwD~~~~~~i~~~~~-------~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~-~~~h~----------~ 747 (879)
..|+............ ...+..+.+.++ +..+. ..++.+++++.......... ...+. .
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (368)
T d1mdah_ 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYP-GMLVW--AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSA 264 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTT-TEEEE--CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEEC
T ss_pred EEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCC-CEEEE--ECCCCEEEEEECCCCEEEEEECCCCCCEEEEEEECCC
T ss_conf 99982689626665303111356664660101558-68999--3489779996069936997602465430455401278
Q ss_pred CEEEEEEC-CCCEEEEEECC---------CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC--EEEEEECCC
Q ss_conf 78999974-99889999769---------9099995699964556876079718788679999931999--999992999
Q 002801 748 TVSYVKFV-DATTLVSASTD---------NTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG--YVATGSETN 815 (879)
Q Consensus 748 ~V~~i~fs-~~~~l~sgs~D---------~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~--~lasgs~Dg 815 (879)
....+.++ ++..++....+ ..|.+||..++ +.+..+. +...+..++|+|||+ .+++++.|+
T Consensus 265 g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~------~~~~~~~-~~~~~~~~a~spDG~~~ly~s~~~~~ 337 (368)
T d1mdah_ 265 GFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG------QTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTE 337 (368)
T ss_dssp SSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC------CEEECCE-EEEEECEEEECCSSSCEEEEEETTTT
T ss_pred CCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCC------CEEEEEC-CCCCEEEEEECCCCCEEEEEEECCCC
T ss_conf 8356887179987999835897334058864999989999------4868955-89965179999899989999948999
Q ss_pred CEEEEECCCCCCCEECCCC
Q ss_conf 1999825999972000347
Q 002801 816 EVFVYHKAFPMPALSFNFN 834 (879)
Q Consensus 816 ~v~iw~~~~~~~~~~~~~~ 834 (879)
.|++||..+++.+.+++.+
T Consensus 338 ~v~v~D~~tgk~~~~i~~g 356 (368)
T d1mdah_ 338 VLDIYDAASDQDQSSVELD 356 (368)
T ss_dssp EEEEEESSSCEEEEECCCC
T ss_pred EEEEEECCCCCEEEEEECC
T ss_conf 6999989999799998799
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.64 E-value=8.9e-16 Score=105.77 Aligned_cols=260 Identities=8% Similarity=0.005 Sum_probs=155.4
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCC--EEEEEECCCCE------------------EEE
Q ss_conf 2404446816898504757978721353458999889999938999--99999589929------------------999
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE--LFAAAGVNKKI------------------KVF 595 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~--~lat~~~dg~I------------------~iw 595 (879)
|++...++.+.++++.++++...+.. .+...+..++|+|+++ +++..+.+ .+ ..+
T Consensus 87 fV~d~~~~rVavIDl~t~k~~~ii~i----P~g~gphgi~~spdg~t~YV~~~~~~-~v~~~~dg~~~~~~~~~~~~~~i 161 (441)
T d1qnia2 87 FINDKANTRVARIRLDIMKTDKITHI----PNVQAIHGLRLQKVPKTNYVFCNAEF-VIPQPNDGTDFSLDNSYTMFTAI 161 (441)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEEC----TTCCCEEEEEECCSSBCCEEEEEECS-CEESSCSSSCCCGGGEEEEEEEE
T ss_pred EEECCCCCEEEEEECCCCCEEEEEEC----CCCCCCCCEEEECCCCEEEEEECCCC-CCCCCCCCCCCCCCCCCCEEEEE
T ss_conf 99738999799998877847557956----78878643487056998999956677-54436766300145553238866
Q ss_pred ECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCC-CEEEEECCCCEEEEEECCCCCCEEEEEEECCCCC
Q ss_conf 548644767641134177235898138998178999699960798-2999986887288981247874999998039999
Q 002801 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG-VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPT 674 (879)
Q Consensus 596 d~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg-~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~ 674 (879)
|..+. ..............+.|++. +.++++++++. .+..++..+.+....+... .....+.+.+ +++
T Consensus 162 D~~t~--------~v~~qI~v~~~p~~v~~spd-Gk~a~vt~~nse~~~~id~~t~~~~d~i~v~-n~p~~~~~~~-dGk 230 (441)
T d1qnia2 162 DAETM--------DVAWQVIVDGNLDNTDADYT-GKYATSTCYNSERAVDLAGTMRNDRDWVVVF-NVERIAAAVK-AGN 230 (441)
T ss_dssp ETTTC--------SEEEEEEESSCCCCEEECSS-SSEEEEEESCTTCCSSHHHHTCSSBCEEEEE-EHHHHHHHHH-TTC
T ss_pred CCCCC--------EEEEEEECCCCCCCEEECCC-CCEEEEEECCCCCEEEEECCCCCEEEEEEEC-CCCCEEEEEC-CCC
T ss_conf 37556--------06478736998654698799-9989998517873189851571217899968-8511079966-999
Q ss_pred EEEEEECCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEE-EEEECCCEEEEEECCCCCE----------EEEEEC
Q ss_conf 99999499949999699991488995399669999628999799-9996799199998579960----------069981
Q 002801 675 LLASGSDDGSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSL-AFGSADHRIYYYDLRNSKI----------PLCTLI 743 (879)
Q Consensus 675 ~lasgs~Dg~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l-~tgs~D~~I~iwDl~~~~~----------~~~~~~ 743 (879)
++..+ .++.+.+++......+.++........+.++|+ |+++ +++..+++|.+||+.+... .+.-..
T Consensus 231 ~~~v~-~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPD-Gkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~ 308 (441)
T d1qnia2 231 FKTIG-DSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPD-GKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEP 308 (441)
T ss_dssp CBCCT-TCCCCEEECSSSCSSEEEECCBSSCCCEEECTT-SCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECC
T ss_pred EEEEC-CCCCEEEECCCCCCEEEEEECCCCCCCCEECCC-CCEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCEEEEEEC
T ss_conf 99969-998289980368706899717988667268999-8789990775993899983224457525688424799601
Q ss_pred CCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCC----CCCCCCCEEEE-----ECCCCCEEEEEEECCCCEEEEEEC
Q ss_conf 578878999974-99889999769909999569996----45568760797-----187886799999319999999929
Q 002801 744 GHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCT----SRVIDTPLHSF-----TGHTNVKNFVGLSVWDGYVATGSE 813 (879)
Q Consensus 744 ~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~----~~~~~~~~~~~-----~~h~~~v~~v~~sp~~~~lasgs~ 813 (879)
...-......|. +|..+.|...|++|..|++.... .......+..+ .||...+....++|+|+||++++.
T Consensus 309 ~~glgplh~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k 388 (441)
T d1qnia2 309 ELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSK 388 (441)
T ss_dssp BCCSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEES
T ss_pred CCCCCCCCCEECCCCEEEECCCCCCEEEEECCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
T ss_conf 45547665226578559985244316897235422133226777656864532668987752454223898848996574
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.60 E-value=8.1e-15 Score=100.09 Aligned_cols=278 Identities=9% Similarity=-0.028 Sum_probs=135.9
Q ss_pred CCCCEEEEEECCCCCEEE---EEECCCC--EEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEE----
Q ss_conf 999889999938999999---9958992--9999548644767641134177235898138998178999699960----
Q 002801 567 SSNLVCSLSFDRDGELFA---AAGVNKK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN---- 637 (879)
Q Consensus 567 h~~~V~si~fspdg~~la---t~~~dg~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~---- 637 (879)
+.+....++..++++... ++..++. +.+||..+... .... .......+.|+|. +..|+..+
T Consensus 18 ~~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~~~------~~~~---~~~~~~~~a~spD-g~~i~~~~~~~~ 87 (368)
T d1mdah_ 18 SDGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVT------LGHS---LGAFLSLAVAGHS-GSDFALASTSFA 87 (368)
T ss_dssp CCCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTTEE------EEEE---EECTTCEEEECTT-SSCEEEEEEEET
T ss_pred CCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCE------EEEE---ECCCCCCCEECCC-CCEEEEECCCCC
T ss_conf 67986664558987612697204578862179970899837------7888---5787775139899-988999755676
Q ss_pred ------CCCCEEEEECCCCEEEEEECCCC-------CCEEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCEEEEEECCC
Q ss_conf ------79829999868872889812478-------74999998039999999994-99949999699991488995399
Q 002801 638 ------FEGVVQVWDVSRSQVLTEMREHE-------RRVWSIDFSSADPTLLASGS-DDGSVKLWSINQGVSIGTIKTKA 703 (879)
Q Consensus 638 ------~dg~V~iwd~~t~~~~~~~~~h~-------~~V~si~fsp~~~~~lasgs-~Dg~V~iwD~~~~~~i~~~~~~~ 703 (879)
.|+.|.+||..+++.+..+..+. .....+.|+| |+++++.+. .++.+.+||+.+++.+..+..+.
T Consensus 88 ~~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~~~g~~p~~~a~Sp-DGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~ 166 (368)
T d1mdah_ 88 RSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASDDQLTKSAS 166 (368)
T ss_dssp TTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEEEEEEECSS
T ss_pred CCCCCCCCCEEEEEECCCCCEEEEECCCCCCEECCCCCCCCEEECC-CCCEEEEEECCCCEEEEEECCCCCEEEEEECCC
T ss_conf 4010356786999989999383064378542102468864058878-998999996899859999899893867860467
Q ss_pred CEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEE-----ECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCC
Q ss_conf 66999962899979999967991999985799600699-----81578878999974-9988999976990999956999
Q 002801 704 NVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCT-----LIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMC 777 (879)
Q Consensus 704 ~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~-----~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~ 777 (879)
... +.|.....++..+.|+.+.+|++......... +..+...+..+.+. ++..+.+. .+.+.+++....
T Consensus 167 ~~~---~~~~~~~~~v~~~~Dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~v~~~~~~~~ 241 (368)
T d1mdah_ 167 CFH---IHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV--ASSILQGDIPAA 241 (368)
T ss_dssp CCC---CEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB--SSCCEEEECCSS
T ss_pred CCE---ECCCCCCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEC--CCCEEEEEECCC
T ss_conf 523---746998239999489988999826896266653031113566646601015586899934--897799960699
Q ss_pred CCCCCCCCEEEEECC----------CCCEEEEEEECCCCEEEEEEC---------CCCEEEEECCCCCCCEECCCCCCCC
Q ss_conf 645568760797187----------886799999319999999929---------9919998259999720003479999
Q 002801 778 TSRVIDTPLHSFTGH----------TNVKNFVGLSVWDGYVATGSE---------TNEVFVYHKAFPMPALSFNFNHADP 838 (879)
Q Consensus 778 ~~~~~~~~~~~~~~h----------~~~v~~v~~sp~~~~lasgs~---------Dg~v~iw~~~~~~~~~~~~~~~~~~ 838 (879)
... .+.....+ ......+++++++..++.... ...|++|+..+++.+..+..
T Consensus 242 ~~~----~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~----- 312 (368)
T d1mdah_ 242 GAT----MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----- 312 (368)
T ss_dssp CCE----EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE-----
T ss_pred CEE----EEEECCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCCEEECCCCEEEEEECCCCCEEEEECC-----
T ss_conf 369----97602465430455401278835688717998799983589733405886499998999948689558-----
Q ss_pred CCCCCCCCCCCCEEEEEEECCCCCE-EEEEECCCCEEEEEE
Q ss_conf 9999878789979999990799939-999937984999991
Q 002801 839 LSGPETDDAAQFISSVCWRGQSSNT-LVAANSSGNIKILEM 878 (879)
Q Consensus 839 ~~~~~~~~h~~~V~~v~~~p~~~~~-l~s~~~Dg~I~iw~l 878 (879)
...+.+++|+|++..+ +++...|+.|++|+.
T Consensus 313 ---------~~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~ 344 (368)
T d1mdah_ 313 ---------GHDSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp ---------EEEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred ---------CCCEEEEEECCCCCEEEEEEECCCCEEEEEEC
T ss_conf ---------99651799998999899999489996999989
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=99.50 E-value=5.5e-12 Score=83.29 Aligned_cols=319 Identities=8% Similarity=-0.052 Sum_probs=176.5
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCC-------------------------CCCCCCCEEEEEECCCCCEEEEE-ECC
Q ss_conf 2404446816898504757978721353-------------------------45899988999993899999999-589
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGD-------------------------LLNSSNLVCSLSFDRDGELFAAA-GVN 589 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~-------------------------l~~h~~~V~si~fspdg~~lat~-~~d 589 (879)
|.++..+|.+.+|+..++++.+.+..-. -..|.-......++|||+++++. ..+
T Consensus 14 f~Sgg~sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lfV~d~~~ 93 (441)
T d1qnia2 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLFINDKAN 93 (441)
T ss_dssp EEECBTTCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EEECCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCC
T ss_conf 99688777489996789807999976757898799988865047831332256755677722103268888899973899
Q ss_pred CCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCE------------------EEEECCCCE
Q ss_conf 92999954864476764113417723589813899817899969996079829------------------999868872
Q 002801 590 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV------------------QVWDVSRSQ 651 (879)
Q Consensus 590 g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V------------------~iwd~~t~~ 651 (879)
.+|.++|+.+... ..+..+.....+..++|++......+++..+..+ ..+|..+.+
T Consensus 94 ~rVavIDl~t~k~------~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~t~~ 167 (441)
T d1qnia2 94 TRVARIRLDIMKT------DKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAETMD 167 (441)
T ss_dssp TEEEEEETTTTEE------EEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETTTCS
T ss_pred CEEEEEECCCCCE------EEEEECCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCE
T ss_conf 9799998877847------5579567887864348705699899995667754436766300145553238866375560
Q ss_pred EEEEECCCCCCEEEEEEECCCCCEEEEEECCC-CEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEE
Q ss_conf 88981247874999998039999999994999-49999699991488995399669999628999799999679919999
Q 002801 652 VLTEMREHERRVWSIDFSSADPTLLASGSDDG-SVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYY 730 (879)
Q Consensus 652 ~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg-~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~D~~I~iw 730 (879)
...++.. ......+.++| +++++++.+.+. .+..++..+......+........+.+.|+ ++++..+ .++.+.++
T Consensus 168 v~~qI~v-~~~p~~v~~sp-dGk~a~vt~~nse~~~~id~~t~~~~d~i~v~n~p~~~~~~~d-Gk~~~v~-~~~v~vvd 243 (441)
T d1qnia2 168 VAWQVIV-DGNLDNTDADY-TGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKA-GNFKTIG-DSKVPVVD 243 (441)
T ss_dssp EEEEEEE-SSCCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCSSBCEEEEEEHHHHHHHHHT-TCCBCCT-TCCCCEEE
T ss_pred EEEEEEC-CCCCCCEEECC-CCCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEECC-CCEEEEC-CCCCEEEE
T ss_conf 6478736-99865469879-9998999851787318985157121789996885110799669-9999969-99828998
Q ss_pred ECCCCCEEEEEECCCCCCEEEEEEC-CCCEEE-EEECCCCEEEEECCCCCCCCC-----CCCEEEEECCCCCEEEEEEEC
Q ss_conf 8579960069981578878999974-998899-997699099995699964556-----876079718788679999931
Q 002801 731 DLRNSKIPLCTLIGHNKTVSYVKFV-DATTLV-SASTDNTLKLWDLSMCTSRVI-----DTPLHSFTGHTNVKNFVGLSV 803 (879)
Q Consensus 731 Dl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~-sgs~D~~i~iwd~~~~~~~~~-----~~~~~~~~~h~~~v~~v~~sp 803 (879)
+....+ .+..+...+. ...+.++ ||++++ ++..++++.+||+.+...... ..++.-.....-......|++
T Consensus 244 ~~~~~~-v~~~IPvgks-PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~ 321 (441)
T d1qnia2 244 GRGESE-FTRYIPVPKN-PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDG 321 (441)
T ss_dssp CSSSCS-SEEEECCBSS-CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECS
T ss_pred CCCCCC-EEEEEECCCC-CCCCEECCCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCEEEEEECCCCCCCCCCEECC
T ss_conf 036870-6899717988-66726899987899907759938999832244575256884247996014554766522657
Q ss_pred CCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCC----CCCCCCCCCCCEEEEEEECCCCCEEEEEEC
Q ss_conf 999999992999199982599997200034799999----999878789979999990799939999937
Q 002801 804 WDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPL----SGPETDDAAQFISSVCWRGQSSNTLVAANS 869 (879)
Q Consensus 804 ~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~----~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~ 869 (879)
+|..+.+...|..|..|++... +..+......++ ..+-..+|...+.+.+++|+|. +|++++.
T Consensus 322 ~g~~yts~~~ds~v~kw~~~~~--~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk-~l~s~~k 388 (441)
T d1qnia2 322 RGNAYTTLFIDSQVCKWNIADA--IKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGK-WLVVLSK 388 (441)
T ss_dssp SSEEEEEETTTTEEEEEEHHHH--HHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCC-EEEEEES
T ss_pred CCEEEECCCCCCEEEEECCCHH--HHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-EEEECCC
T ss_conf 8559985244316897235422--13322677765686453266898775245422389884-8996574
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.47 E-value=9.6e-12 Score=81.85 Aligned_cols=278 Identities=9% Similarity=0.011 Sum_probs=145.4
Q ss_pred CCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCC--CCCCEEE----
Q ss_conf 4468168985047579787213534589998899999389999999958992999954864476764--1134177----
Q 002801 540 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRD--IHYPVVE---- 613 (879)
Q Consensus 540 ~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~--~~~~~~~---- 613 (879)
+.++.+.+|+..+.+.. .+..+.+.+..+.|+|||+.+|.. .++.+.+|+..++...... .......
T Consensus 89 s~~~~~~l~d~~~~~~~------~l~~~~~~~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~ 161 (470)
T d2bgra1 89 SYTASYDIYDLNKRQLI------TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGIT 161 (470)
T ss_dssp CEEEEEEEEETTTTEEC------CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBC
T ss_pred CCCCEEEEEECCCCCCC------CCCCCCCCCCCCCCCCCCCEEEEE-ECCCCEEEECCCCCEEEEEECCCCCCCCCCCC
T ss_conf 46734999989888513------124687423101014676413575-14641379889994653210147774053543
Q ss_pred -----ECCCCCEEEEEEECCCCCEEEEEECCCC-EEEEEC-----------------------------------CCCEE
Q ss_conf -----2358981389981789996999607982-999986-----------------------------------88728
Q 002801 614 -----MASRSKLSSICWNSYIKSQIASSNFEGV-VQVWDV-----------------------------------SRSQV 652 (879)
Q Consensus 614 -----~~~~~~I~~i~~~~~~~~~l~s~~~dg~-V~iwd~-----------------------------------~t~~~ 652 (879)
....+....+.|+|. +..|+....|.. |..|.+ ..++.
T Consensus 162 d~~~~~~~~~~~~~~~wSPD-Gk~ia~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~ 240 (470)
T d2bgra1 162 DWVYEEEVFSAYSALWWSPN-GTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSS 240 (470)
T ss_dssp CHHHHHHTSSSSBCEEECTT-SSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEEGGGCCS
T ss_pred CEEEEEEECCCCCCCEECCC-CCCCCEEEECCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCE
T ss_conf 20112100477653079999-87220268637767069987660477788713540366545468862579999888614
Q ss_pred EEEE-----------CCCCCCEEEEEEECCCCCEEEEE-ECCC---C--EEEEECCCCCEEEEE-------ECCC-----
Q ss_conf 8981-----------24787499999803999999999-4999---4--999969999148899-------5399-----
Q 002801 653 LTEM-----------REHERRVWSIDFSSADPTLLASG-SDDG---S--VKLWSINQGVSIGTI-------KTKA----- 703 (879)
Q Consensus 653 ~~~~-----------~~h~~~V~si~fsp~~~~~lasg-s~Dg---~--V~iwD~~~~~~i~~~-------~~~~----- 703 (879)
.... ......+..+.|.+ ++..++.. ...+ . +..+|..++...... ....
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~-~~~~~~~~~~r~~~~~~~~~~~~d~~tg~~~~~~~~~~~~~~~~~~i~~~ 319 (470)
T d2bgra1 241 VTNATSIQITAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRF 319 (470)
T ss_dssp SSCCCEEEECCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSS
T ss_pred EEECCCCCCCCCCCCCCCCCEEEEEEECC-CCCEEEEEEECCCCCEEEEEEEECCCCCCEEEEEEEEEEEEECCCEEECC
T ss_conf 55203322478633478986677888768-78334787304688159999996188894789998751466214335313
Q ss_pred CEEEEEEECCC-CCEEEEEECCCEEEEE--ECCCCCEEEEEECCCCCCEEEEEECCCCE-EEEEECCC----CEEEEECC
Q ss_conf 66999962899-9799999679919999--85799600699815788789999749988-99997699----09999569
Q 002801 704 NVCCVQFPLDS-GRSLAFGSADHRIYYY--DLRNSKIPLCTLIGHNKTVSYVKFVDATT-LVSASTDN----TLKLWDLS 775 (879)
Q Consensus 704 ~v~~v~~~p~~-~~~l~tgs~D~~I~iw--Dl~~~~~~~~~~~~h~~~V~~i~fs~~~~-l~sgs~D~----~i~iwd~~ 775 (879)
......+.++. +.+++....|+..++| +..... ...+..+...|..+...+++. ++++..++ .-.||.+.
T Consensus 320 ~~~~~~~~~~~~~~~~~~s~~dg~~~ly~~~~~g~~--~~~lt~g~~~v~~~~~~d~~~iyf~a~~~~~~p~~~~ly~v~ 397 (470)
T d2bgra1 320 RPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD--CTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQ 397 (470)
T ss_dssp SCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSC--CEESCCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred CCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCCC--EEEECCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEEEEEE
T ss_conf 577724542378847987436757645999526873--045116980487878977999999995689983517999998
Q ss_pred CCCCCCCCCCEEE----EECCCCCEEEEEEECCCCEEE-EEE--CCCCEEEEECCCCCCCEECC
Q ss_conf 9964556876079----718788679999931999999-992--99919998259999720003
Q 002801 776 MCTSRVIDTPLHS----FTGHTNVKNFVGLSVWDGYVA-TGS--ETNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 776 ~~~~~~~~~~~~~----~~~h~~~v~~v~~sp~~~~la-sgs--~Dg~v~iw~~~~~~~~~~~~ 832 (879)
.... ..... +.+|...+..+.|||+|+|++ +++ ..-.+.+|+...++.+..+.
T Consensus 398 ~~g~----~~~~~lt~~~~~~~~~~~s~~fSpdgky~~~~~s~~~~P~~~l~~~~~g~~v~~le 457 (470)
T d2bgra1 398 LSDY----TKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVLE 457 (470)
T ss_dssp TTCT----TCEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTTEEEEEEE
T ss_pred CCCC----CCEEEECCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEEEEE
T ss_conf 8899----86057035435888987999999899999998328999819999989998999980
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.47 E-value=2.2e-14 Score=97.54 Aligned_cols=69 Identities=17% Similarity=0.101 Sum_probs=58.6
Q ss_pred CCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCC
Q ss_conf 752888760885334530699998785688999999999998521037110367886234244787245306655698
Q 002801 55 DPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 132 (879)
Q Consensus 55 ~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~givH~DlkP~Nill~~~~~vk~~dfg~~~~~ 132 (879)
..+++||++++..+.+ ++......++.|++.+|.|+|++||+||||||+|||++. +.++++|||.+...
T Consensus 84 ~~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~-~~~~liDFG~a~~~ 152 (191)
T d1zara2 84 GNAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE-EGIWIIDFPQSVEV 152 (191)
T ss_dssp TTEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET-TEEEECCCTTCEET
T ss_pred CCEEEEEEECCCCCCC--------HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEEC-CCEEEEECCCCCCC
T ss_conf 8889999504565420--------015789999999999999982688898368903611428-98999877884308
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.40 E-value=6.3e-10 Score=71.08 Aligned_cols=235 Identities=8% Similarity=0.010 Sum_probs=101.5
Q ss_pred CCCCEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 999889999938999999995-8992999954864476764113417723589813899817899969996079829999
Q 002801 567 SSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVW 645 (879)
Q Consensus 567 h~~~V~si~fspdg~~lat~~-~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iw 645 (879)
+.-...+++++++|.++++.. ..+.|..++....... ............+++.+. +..+++....+.+.++
T Consensus 12 ~~~~P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~p~gvav~~~-g~i~v~d~~~~~i~~~ 83 (260)
T d1rwia_ 12 FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT-------VLPFNGLYQPQGLAVDGA-GTVYVTDFNNRVVTLA 83 (260)
T ss_dssp SCCCEEEEEECTTCCEEEEECSSSCEEEEEC----CEE-------ECCCCSCCSCCCEEECTT-CCEEEEETTTEEEEEC
T ss_pred CCCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCEEE-------EECCCCCCCCEEEEECCC-CCEEEEEEEECEEEEE
T ss_conf 76987889996999999997189988999938996689-------743698668408999389-9889863100003554
Q ss_pred ECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEE-EECCCCEEEEEEECCCCCEEEEEECC
Q ss_conf 86887288981247874999998039999999994999499996999914889-95399669999628999799999679
Q 002801 646 DVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGT-IKTKANVCCVQFPLDSGRSLAFGSAD 724 (879)
Q Consensus 646 d~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~-~~~~~~v~~v~~~p~~~~~l~tgs~D 724 (879)
+..+........ .-..++.+++.+ +++++++-.....+..++......... ...-.....++++|+ ++++++...+
T Consensus 84 ~~~~~~~~~~~~-~~~~p~~iavd~-~g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~~~v~~~~~ 160 (260)
T d1rwia_ 84 AGSNNQTVLPFD-GLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS-GNVYVTDTDN 160 (260)
T ss_dssp TTCSCCEECCCC-SCCSEEEEEECT-TCCEEEEEGGGTEEEEECTTCSSCEECCCCSCCSCCEEEECTT-CCEEEEEGGG
T ss_pred EECCCEEEEEEE-EEEECCCCCCCC-CCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCC-CCEEEECCCC
T ss_conf 211200000010-000000002455-3205750335553211232222012232036677520545489-9886410256
Q ss_pred CEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEE-CCCCCEEEEEEE
Q ss_conf 9199998579960069981578878999974-99889999769909999569996455687607971-878867999993
Q 002801 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFT-GHTNVKNFVGLS 802 (879)
Q Consensus 725 ~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~-~h~~~v~~v~~s 802 (879)
+.|..+|...... .......-.....+.+. +++++++....+.|..++..... ...+. ..-.....++++
T Consensus 161 ~~i~~~d~~~~~~-~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~-------~~~~~~~~~~~P~~i~~d 232 (260)
T d1rwia_ 161 NRVVKLEAESNNQ-VVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT-------STVLPFTGLNTPLAVAVD 232 (260)
T ss_dssp TEEEEECTTTCCE-EECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSC-------CEECCCCSCCCEEEEEEC
T ss_pred CCCCCCCCCCCEE-EEEECCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCE-------EEEECCCCCCCEEEEEEE
T ss_conf 4332223431001-22210114787631231000134321489989999699976-------999706998981799990
Q ss_pred CCCCEEEEEECCCCEEEE
Q ss_conf 199999999299919998
Q 002801 803 VWDGYVATGSETNEVFVY 820 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~iw 820 (879)
+++..+++-..++.|+..
T Consensus 233 ~~g~l~vad~~~~rI~~i 250 (260)
T d1rwia_ 233 SDRTVYVADRGNDRVVKL 250 (260)
T ss_dssp TTCCEEEEEGGGTEEEEE
T ss_pred CCCCEEEEECCCCEEEEE
T ss_conf 899999997999989999
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.38 E-value=5.2e-09 Score=65.63 Aligned_cols=224 Identities=13% Similarity=0.024 Sum_probs=112.2
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCC
Q ss_conf 88999993899999999589929999548644767641134177235898138998178999699960798299998688
Q 002801 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR 649 (879)
Q Consensus 570 ~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t 649 (879)
.+..++++|||+++++...+++|..|+-.... .........+.+++|.+. ++.+++...++.+..|+...
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~---------~~~~~~~~~~~gla~~~d-G~l~v~~~~~~~~~~~~~~~ 98 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDGNQ---------QIHATVEGKVSGLAFTSN-GDLVATGWNADSIPVVSLVK 98 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCCE---------EEEEECSSEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred CCCCEEECCCCCEEEEECCCCEEEEEECCCCE---------EEEECCCCCCCEEEECCC-CCEEEEECCCCEEEEEEECC
T ss_conf 84787799998899996889989999089988---------999717998536898677-88699832895378887101
Q ss_pred C--EEEEEE-CCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC-----------CCCEEEEEEECCCC
Q ss_conf 7--288981-247874999998039999999994999499996999914889953-----------99669999628999
Q 002801 650 S--QVLTEM-REHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-----------KANVCCVQFPLDSG 715 (879)
Q Consensus 650 ~--~~~~~~-~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~-----------~~~v~~v~~~p~~~ 715 (879)
. ...... .......+.+.+.+ +++++++-+.++.+..+|...+........ ......+.+.. .
T Consensus 99 ~~~~~~~~~~~~~~~~~n~i~~~~-~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~--~ 175 (302)
T d2p4oa1 99 SDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFG--N 175 (302)
T ss_dssp TTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEET--T
T ss_pred CCCCEEECCCCCCCCCCCEEEECC-CCCEEEECCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCC--C
T ss_conf 111012102357863221667715-7978750356554102421687303675188640143157632243201169--8
Q ss_pred CEEEEEECCCEEEEEECCCCCEE--EEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECC
Q ss_conf 79999967991999985799600--69981578878999974-9988999976990999956999645568760797187
Q 002801 716 RSLAFGSADHRIYYYDLRNSKIP--LCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH 792 (879)
Q Consensus 716 ~~l~tgs~D~~I~iwDl~~~~~~--~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h 792 (879)
.++++.+..+.|+.++....... ...+ ........+.|. +|+++++...++.|..++..... ..+......
T Consensus 176 ~l~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~-----~~~~~~~~~ 249 (302)
T d2p4oa1 176 FLYVSNTEKMLLLRIPVDSTDKPGEPEIF-VEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRST-----TIIAQAEQG 249 (302)
T ss_dssp EEEEEETTTTEEEEEEBCTTSCBCCCEEE-EESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCE-----EEEECGGGT
T ss_pred CEEEECCCCCEEEECCCCCCCCCCCCCCC-CCCCCCCCEEECCCCCEEEEECCCCCEEEECCCCCE-----EEEEECCCC
T ss_conf 30440378876986344333323453101-589987523787999999997489918998789978-----999963789
Q ss_pred CCCEEEEEE---ECCCCEEEEEE
Q ss_conf 886799999---31999999992
Q 002801 793 TNVKNFVGL---SVWDGYVATGS 812 (879)
Q Consensus 793 ~~~v~~v~~---sp~~~~lasgs 812 (879)
....+.++| ++|++.|..++
T Consensus 250 ~~~pt~vafg~~~~D~~~Lyvtt 272 (302)
T d2p4oa1 250 VIGSTAVAFGQTEGDCTAIYVVT 272 (302)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEE
T ss_pred CCCCEEEEECCCCCCCCEEEEEC
T ss_conf 88824899708788789899998
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.36 E-value=4.7e-09 Score=65.88 Aligned_cols=251 Identities=12% Similarity=0.079 Sum_probs=134.8
Q ss_pred CCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCC--EEEEEEC-CCCE
Q ss_conf 899988999993899999999589929999548644767641134177235898138998178999--6999607-9829
Q 002801 566 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS--QIASSNF-EGVV 642 (879)
Q Consensus 566 ~h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~--~l~s~~~-dg~V 642 (879)
.....+.-++|+++++++.++.. +.+..|.+...... . .............+.+++. +. ++++..+ .+.|
T Consensus 37 ~~~~~~s~la~s~d~~~ly~~~~-~~~~~~~i~~~~~~----~-~~~~~~~~~~p~~v~~~~~-~~~~~v~~a~~~~~~v 109 (365)
T d1jofa_ 37 PQDEPISWMTFDHERKNIYGAAM-KKWSSFAVKSPTEI----V-HEASHPIGGHPRANDADTN-TRAIFLLAAKQPPYAV 109 (365)
T ss_dssp CTTCCCSEEEECTTSSEEEEEEB-TEEEEEEEEETTEE----E-EEEEEECCSSGGGGCTTSC-CEEEEEEECSSTTCCE
T ss_pred CCCCCCCEEEECCCCCEEEEEEC-CCEEEEEEECCCCE----E-EEEEECCCCCCEEEEECCC-CCEEEEEEECCCCCEE
T ss_conf 68999777999489899999938-94789999089976----9-8764128998678998789-9879999932799789
Q ss_pred EEEECCC-------------CEE---EEEE-CCCCCCEEEEEEECCCCCEEEEEEC-CCCEEEEECCCCCEE---EEEE-
Q ss_conf 9998688-------------728---8981-2478749999980399999999949-994999969999148---8995-
Q 002801 643 QVWDVSR-------------SQV---LTEM-REHERRVWSIDFSSADPTLLASGSD-DGSVKLWSINQGVSI---GTIK- 700 (879)
Q Consensus 643 ~iwd~~t-------------~~~---~~~~-~~h~~~V~si~fsp~~~~~lasgs~-Dg~V~iwD~~~~~~i---~~~~- 700 (879)
..+.+.. .+. .... ......++++.|+| +++++++++. ...|.+|+......+ ..+.
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sP-dG~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~ 188 (365)
T d1jofa_ 110 YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDA 188 (365)
T ss_dssp EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEECCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCEEEEECC-CCCEEEEEECCCCEEEEEECCCCCCEEECCCEEE
T ss_conf 986745788742068664033004764675568898115978889-9998998207998799997068871665251111
Q ss_pred --CCCCEEEEEEECCCCCEE-EEEECCCEEEEEECCCCCEE-EEE---EC--------------CCCCCEEEEEEC-CCC
Q ss_conf --399669999628999799-99967991999985799600-699---81--------------578878999974-998
Q 002801 701 --TKANVCCVQFPLDSGRSL-AFGSADHRIYYYDLRNSKIP-LCT---LI--------------GHNKTVSYVKFV-DAT 758 (879)
Q Consensus 701 --~~~~v~~v~~~p~~~~~l-~tgs~D~~I~iwDl~~~~~~-~~~---~~--------------~h~~~V~~i~fs-~~~ 758 (879)
.......+.|+|+ ++++ ++...++.|.+|+....... +.. .. .+......+.++ +|+
T Consensus 189 ~~~g~gPr~i~f~pd-g~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 267 (365)
T d1jofa_ 189 PDPGDHPRWVAMHPT-GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK 267 (365)
T ss_dssp SSTTCCEEEEEECTT-SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS
T ss_pred CCCCCCEEEEEECCC-CCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 278874089998899-8669995158998999995598753778731240245565566654444357763169989999
Q ss_pred EEEEEEC-CC-----CEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEC-CCCEEEEE-ECCCCEEEEECCCC
Q ss_conf 8999976-99-----099995699964556876079718788679999931-99999999-29991999825999
Q 002801 759 TLVSAST-DN-----TLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSV-WDGYVATG-SETNEVFVYHKAFP 825 (879)
Q Consensus 759 ~l~sgs~-D~-----~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~lasg-s~Dg~v~iw~~~~~ 825 (879)
+|+++.. +. .|..|++...........+..........+.++++| +|++|+.+ ..++.|.+|+++..
T Consensus 268 ~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~~~ 342 (365)
T d1jofa_ 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEEEECCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEEECC
T ss_conf 789971357875422799998568871446767667776799864789648999999999679994999998288
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=99.30 E-value=1.4e-08 Score=63.02 Aligned_cols=251 Identities=9% Similarity=0.048 Sum_probs=137.6
Q ss_pred CCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCC-EEEEEE-CCCCCCEEEEEEECCCCCEE-EEEE--CCCCEEEEE
Q ss_conf 358981389981789996999607982999986887-288981-24787499999803999999-9994--999499996
Q 002801 615 ASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRS-QVLTEM-REHERRVWSIDFSSADPTLL-ASGS--DDGSVKLWS 689 (879)
Q Consensus 615 ~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~-~~~~~~-~~h~~~V~si~fsp~~~~~l-asgs--~Dg~V~iwD 689 (879)
.....++-+++++. ++.|+++. .+.+..|.+... ...... .........+.+++ +++.+ ++.. ..++|..+.
T Consensus 37 ~~~~~~s~la~s~d-~~~ly~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~p~~v~~~~-~~~~~~v~~a~~~~~~v~~~~ 113 (365)
T d1jofa_ 37 PQDEPISWMTFDHE-RKNIYGAA-MKKWSSFAVKSPTEIVHEASHPIGGHPRANDADT-NTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CTTCCCSEEEECTT-SSEEEEEE-BTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTS-CCEEEEEEECSSTTCCEEEEE
T ss_pred CCCCCCCEEEECCC-CCEEEEEE-CCCEEEEEEECCCCEEEEEEECCCCCCEEEEECC-CCCEEEEEEECCCCCEEEEEE
T ss_conf 68999777999489-89999993-8947899990899769876412899867899878-998799999327997899867
Q ss_pred CCC------------C----CEEEEEE--CCCCEEEEEEECCCCCEEEEEEC-CCEEEEEECCCCCE--EEEEEC--CCC
Q ss_conf 999------------9----1488995--39966999962899979999967-99199998579960--069981--578
Q 002801 690 INQ------------G----VSIGTIK--TKANVCCVQFPLDSGRSLAFGSA-DHRIYYYDLRNSKI--PLCTLI--GHN 746 (879)
Q Consensus 690 ~~~------------~----~~i~~~~--~~~~v~~v~~~p~~~~~l~tgs~-D~~I~iwDl~~~~~--~~~~~~--~h~ 746 (879)
+.. . ....... ....+.++.|+|+ ++++++++. ...|.+|+...... ...... ...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~h~h~v~~sPd-G~~l~v~d~g~d~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T d1jofa_ 114 FYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT-ETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT-SSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred CCCCCCCCEEEEEEECCEECCCCCCCCCCCCCCCEEEEECCC-CCEEEEEECCCCEEEEEECCCCCCEEECCCEEECCCC
T ss_conf 457887420686640330047646755688981159788899-9989982079987999970688716652511112788
Q ss_pred CCEEEEEEC-CCCEEEEE-ECCCCEEEEECCCCCCCCCCCCEEEEE--------------CCCCCEEEEEEECCCCEEEE
Q ss_conf 878999974-99889999-769909999569996455687607971--------------87886799999319999999
Q 002801 747 KTVSYVKFV-DATTLVSA-STDNTLKLWDLSMCTSRVIDTPLHSFT--------------GHTNVKNFVGLSVWDGYVAT 810 (879)
Q Consensus 747 ~~V~~i~fs-~~~~l~sg-s~D~~i~iwd~~~~~~~~~~~~~~~~~--------------~h~~~v~~v~~sp~~~~las 810 (879)
.....+.|+ +++++... ..+++|.+|++........ ....... .+......+.++|+|+++++
T Consensus 193 ~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyv 271 (365)
T d1jofa_ 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV-YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE-EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CCEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCEEE-EEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEE
T ss_conf 74089998899866999515899899999559875377-87312402455655666544443577631699899997899
Q ss_pred EE-CCC-----CEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEC-CCCCEEEEEE-CCCCEEEEEE
Q ss_conf 92-999-----1999825999972000347999999998787899799999907-9993999993-7984999991
Q 002801 811 GS-ETN-----EVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRG-QSSNTLVAAN-SSGNIKILEM 878 (879)
Q Consensus 811 gs-~Dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p-~~~~~l~s~~-~Dg~I~iw~l 878 (879)
+. .+. .|..|.+.....+......... ........+++++| ++. +|++++ .++.|.+|++
T Consensus 272 snr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~-------~~~G~~p~~i~~~p~~G~-~l~va~~~s~~v~v~~~ 339 (365)
T d1jofa_ 272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT-------PTSGGHSNAVSPCPWSDE-WMAITDDQEGWLEIYRW 339 (365)
T ss_dssp EEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC-------SSCCTTCCCEEECTTCTT-EEEEECSSSCEEEEEEE
T ss_pred ECCCCCCCCCEEEEEEEECCCCCEEEEEEEEEE-------ECCCCCCCEEEECCCCCC-EEEEEECCCCEEEEEEE
T ss_conf 713578754227999985688714467676677-------767998647896489999-99999679994999998
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.27 E-value=2.1e-08 Score=62.09 Aligned_cols=245 Identities=9% Similarity=0.063 Sum_probs=144.5
Q ss_pred CCCCEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEE-ECCCCEEEE
Q ss_conf 9998899999389999999958992999954864476764113417723589813899817899969996-079829999
Q 002801 567 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS-NFEGVVQVW 645 (879)
Q Consensus 567 h~~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~-~~dg~V~iw 645 (879)
.-+....++++++++++++-..+.+|++|+.+....... ...............+.+....+..+++. ..++.|..+
T Consensus 21 ~f~~P~gvavd~dg~i~VaD~~n~rI~v~d~~G~~~~~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~ 98 (279)
T d1q7fa_ 21 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQF--GECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 98 (279)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEE--CCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred EECCCCEEEECCCCCEEEEECCCCEEEEEECCCCEEEEE--CCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
T ss_conf 288900799949998999979989899996999999981--665788664226630001234455200004775310000
Q ss_pred ECCCCEEEEEEC-CCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC---CCCEEEEEEECCCCCEEEEE
Q ss_conf 868872889812-47874999998039999999994999499996999914889953---99669999628999799999
Q 002801 646 DVSRSQVLTEMR-EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT---KANVCCVQFPLDSGRSLAFG 721 (879)
Q Consensus 646 d~~t~~~~~~~~-~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~---~~~v~~v~~~p~~~~~l~tg 721 (879)
+.. ++....+. ......+.+.+.+ ++.++++....+.+.+++.. ++.+.++.. ......+++.++ ++++++.
T Consensus 99 ~~~-g~~~~~~~~~~~~~p~~~avd~-~G~i~v~~~~~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~-g~i~v~d 174 (279)
T d1q7fa_ 99 NQY-GQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDK-QEIFISD 174 (279)
T ss_dssp CTT-SCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSS-SEEEEEE
T ss_pred CCC-CCCEEECCCCCCCCCCEECCCC-CCCEEEEEECCCEEEEECCC-CCEEECCCCCCCCCCCCEEEECCC-EEEEEEE
T ss_conf 025-6302403888642542000014-78479996326325676268-750100220010256624320120-0178620
Q ss_pred ECCCEEEEEECCCCCEEEEEEC--CCCCCEEEEEEC-CCCEEEEEECC-CCEEEEECCCCCCCCCCCCEEEEECC--CCC
Q ss_conf 6799199998579960069981--578878999974-99889999769-90999956999645568760797187--886
Q 002801 722 SADHRIYYYDLRNSKIPLCTLI--GHNKTVSYVKFV-DATTLVSASTD-NTLKLWDLSMCTSRVIDTPLHSFTGH--TNV 795 (879)
Q Consensus 722 s~D~~I~iwDl~~~~~~~~~~~--~h~~~V~~i~fs-~~~~l~sgs~D-~~i~iwd~~~~~~~~~~~~~~~~~~h--~~~ 795 (879)
...+.|++||... + .+..+. +.......|++. +|+++++-+.+ ..|.+|+.. + ..+.++... ...
T Consensus 175 ~~~~~V~~~d~~G-~-~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~-G------~~~~~~~~~~~~~~ 245 (279)
T d1q7fa_ 175 NRAHCVKVFNYEG-Q-YLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-G------QLISALESKVKHAQ 245 (279)
T ss_dssp GGGTEEEEEETTC-C-EEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-S------CEEEEEEESSCCSC
T ss_pred CCCCCEEEEECCC-C-EEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCC-C------CEEEEEECCCCCCC
T ss_conf 1355100230479-4-445301132114876232314786999978998089999999-9------99999968888898
Q ss_pred EEEEEEECCCCEEEEEECCCCEEEEECCCCCC
Q ss_conf 79999931999999992999199982599997
Q 002801 796 KNFVGLSVWDGYVATGSETNEVFVYHKAFPMP 827 (879)
Q Consensus 796 v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~ 827 (879)
...|++.+++.++++ +.++.|++|....-.|
T Consensus 246 p~~vav~~dG~l~V~-~~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 246 CFDVALMDDGSVVLA-SKDYRLYIYRYVQLAP 276 (279)
T ss_dssp EEEEEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred EEEEEEECCCCEEEE-ECCCEEEEEEEEEECC
T ss_conf 837999089919999-1899699987220357
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=99.24 E-value=3.3e-08 Score=60.88 Aligned_cols=233 Identities=12% Similarity=0.060 Sum_probs=154.4
Q ss_pred CCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCC-
Q ss_conf 5898138998178999699960798299998688728898124787499999803999999999499949999699991-
Q 002801 616 SRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGV- 694 (879)
Q Consensus 616 ~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~- 694 (879)
....+..+++.+. ++++++...++.|..|+.... ...+......+++++|.+ +++++++...++.+..|+.....
T Consensus 26 ~~~~~e~iAv~pd-G~l~vt~~~~~~I~~i~p~g~--~~~~~~~~~~~~gla~~~-dG~l~v~~~~~~~~~~~~~~~~~~ 101 (302)
T d2p4oa1 26 VNTFLENLASAPD-GTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDG 101 (302)
T ss_dssp TTCCEEEEEECTT-SCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCCCCCCEEECCC-CCEEEEECCCCEEEEEECCCC--EEEEECCCCCCCEEEECC-CCCEEEEECCCCEEEEEEECCCCC
T ss_conf 9988478779999-889999688998999908998--899971799853689867-788699832895378887101111
Q ss_pred EEEEE-E--CCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECC---------CCCCEEEEEECCCCEEEE
Q ss_conf 48899-5--39966999962899979999967991999985799600699815---------788789999749988999
Q 002801 695 SIGTI-K--TKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIG---------HNKTVSYVKFVDATTLVS 762 (879)
Q Consensus 695 ~i~~~-~--~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~---------h~~~V~~i~fs~~~~l~s 762 (879)
....+ . .......+.+.++ ++++++.+.++.+..+|.......+..... .......+.+..+..+++
T Consensus 102 ~~~~~~~~~~~~~~n~i~~~~~-g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~ 180 (302)
T d2p4oa1 102 TVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVS 180 (302)
T ss_dssp CEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEE
T ss_pred CEEECCCCCCCCCCCEEEECCC-CCEEEECCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEE
T ss_conf 0121023578632216677157-978750356554102421687303675188640143157632243201169830440
Q ss_pred EECCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCC-CEECCCCCCCCCCC
Q ss_conf 97699099995699964556876079718788679999931999999992999199982599997-20003479999999
Q 002801 763 ASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMP-ALSFNFNHADPLSG 841 (879)
Q Consensus 763 gs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~-~~~~~~~~~~~~~~ 841 (879)
.+..+.|..++....... .....+. .......++++++|.++++...++.|..|+...... +...
T Consensus 181 ~~~~~~i~~~~~~~~~~~---~~~~~~~-~~~~pdgia~d~dG~l~va~~~~~~V~~i~p~G~~~~~~~~---------- 246 (302)
T d2p4oa1 181 NTEKMLLLRIPVDSTDKP---GEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQA---------- 246 (302)
T ss_dssp ETTTTEEEEEEBCTTSCB---CCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCCEEEEECG----------
T ss_pred CCCCCEEEECCCCCCCCC---CCCCCCC-CCCCCCCEEECCCCCEEEEECCCCCEEEECCCCCEEEEEEC----------
T ss_conf 378876986344333323---4531015-89987523787999999997489918998789978999963----------
Q ss_pred CCCCCCCCCEEEEEE---ECCCCCEEEEEECCC
Q ss_conf 987878997999999---079993999993798
Q 002801 842 PETDDAAQFISSVCW---RGQSSNTLVAANSSG 871 (879)
Q Consensus 842 ~~~~~h~~~V~~v~~---~p~~~~~l~s~~~Dg 871 (879)
......+++++| .+|++ .|..++..|
T Consensus 247 ---~~~~~~pt~vafg~~~~D~~-~Lyvtt~~g 275 (302)
T d2p4oa1 247 ---EQGVIGSTAVAFGQTEGDCT-AIYVVTNGG 275 (302)
T ss_dssp ---GGTCTTEEEEEECCSTTTTT-EEEEEECTT
T ss_pred ---CCCCCCCEEEEECCCCCCCC-EEEEECCCC
T ss_conf ---78988824899708788789-899998898
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.18 E-value=6.4e-08 Score=59.16 Aligned_cols=219 Identities=15% Similarity=0.121 Sum_probs=114.3
Q ss_pred CCCCEEEEEEECCCCCEEEEEEC-CC--CEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEEC-CCC--EEEEE
Q ss_conf 58981389981789996999607-98--29999868872889812478749999980399999999949-994--99996
Q 002801 616 SRSKLSSICWNSYIKSQIASSNF-EG--VVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSD-DGS--VKLWS 689 (879)
Q Consensus 616 ~~~~I~~i~~~~~~~~~l~s~~~-dg--~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~-Dg~--V~iwD 689 (879)
....+...+|+|. ++.|+.... .+ .+.+.+...+... .+..+........|+| ++..++.... ++. +..+.
T Consensus 37 ~~~~~~sP~wSPD-Gk~IAf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~sp-dg~~i~~~~~~~~~~~~~~~~ 113 (269)
T d2hqsa1 37 SPQPLMSPAWSPD-GSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMD 113 (269)
T ss_dssp ESSCEEEEEECTT-SSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEE
T ss_pred CCCCEEEEEECCC-CCEEEEEEEECCCCCEEEEECCCCCEE-EEEEEECCCCCCEECC-CCCEEEEEEECCCCCCEEECC
T ss_conf 8984260388789-998999981526751344311367506-7764202454302448-898646764027864100002
Q ss_pred CCCCCEEEEEECCCCEEEEEEECCCCCEEEEEECCC--EEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECC
Q ss_conf 999914889953996699996289997999996799--199998579960069981578878999974-99889999769
Q 002801 690 INQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSADH--RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTD 766 (879)
Q Consensus 690 ~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~D~--~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D 766 (879)
....................+++.....+++...++ .|...++.... ......+........|+ ++..++..+.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 191 (269)
T d2hqsa1 114 LASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQRITWEGSQNQDADVSSDGKFMVMVSSN 191 (269)
T ss_dssp TTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CEECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCC--CEEEECCCCCCCCCCCCCCCCEEEEEEEC
T ss_conf 2212200001014421145434554433000012687438654213310--00100012222343223454305778605
Q ss_pred -CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEC---CCCEEEEECCCCCCCEECCCCCCCCCCCC
Q ss_conf -90999956999645568760797187886799999319999999929---99199982599997200034799999999
Q 002801 767 -NTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSE---TNEVFVYHKAFPMPALSFNFNHADPLSGP 842 (879)
Q Consensus 767 -~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~---Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 842 (879)
+...+|...... .. .....+........|||||++|+-.+. ...++++++..+.... +.
T Consensus 192 ~~~~~i~~~~~~~-----~~-~~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~~~-lt---------- 254 (269)
T d2hqsa1 192 GGQQHIAKQDLAT-----GG-VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR-LP---------- 254 (269)
T ss_dssp SSCEEEEEEETTT-----CC-EEECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE-CC----------
T ss_pred CCCEEEEEEECCC-----CC-CEEEECCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCCCEEE-EE----------
T ss_conf 8801256760356-----44-0585068654455898999999999817998479999999997799-85----------
Q ss_pred CCCCCCCCEEEEEEECC
Q ss_conf 87878997999999079
Q 002801 843 ETDDAAQFISSVCWRGQ 859 (879)
Q Consensus 843 ~~~~h~~~V~~v~~~p~ 859 (879)
...+.+...+|+|-
T Consensus 255 ---~~~g~~~~p~WSP~ 268 (269)
T d2hqsa1 255 ---ATDGQVKFPAWSPY 268 (269)
T ss_dssp ---CSSSEEEEEEECCC
T ss_pred ---CCCCCEEEEEECCC
T ss_conf ---79985883782898
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.16 E-value=7.5e-08 Score=58.77 Aligned_cols=244 Identities=12% Similarity=0.092 Sum_probs=132.9
Q ss_pred CEEEEEECCCCCEEEEEEC-------CCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCE
Q ss_conf 8899999389999999958-------992999954864476764113417723589813899817899969996079829
Q 002801 570 LVCSLSFDRDGELFAAAGV-------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 642 (879)
Q Consensus 570 ~V~si~fspdg~~lat~~~-------dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V 642 (879)
..-.++|+++|++.++... +++|..|+..+.... ....+. ..........+.|.+. ++.++.++....+
T Consensus 19 g~EGpa~d~dG~ly~~~~~~~~~~~~~g~I~r~d~~~~~~~--~~~~~~-~~~~~g~P~Gl~~~~d-g~~l~vad~~~~i 94 (314)
T d1pjxa_ 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT--VICKPE-VNGYGGIPAGCQCDRD-ANQLFVADMRLGL 94 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE--EEECCE-ETTEECCEEEEEECSS-SSEEEEEETTTEE
T ss_pred CCEEEEEECCCCEEEEECCCCCCCCCCCEEEEEECCCCCEE--EEECCC-CCCCCCCCEEEEEECC-CCEEEEEECCCEE
T ss_conf 97173996999999998754023452999999989999599--997776-5567885306999079-9989999779839
Q ss_pred EEEECCCCEEEEEECCCC----CCEEEEEEECCCCCEEEEEEC---------------CCCEEEEECCCCCEEEEEECCC
Q ss_conf 999868872889812478----749999980399999999949---------------9949999699991488995399
Q 002801 643 QVWDVSRSQVLTEMREHE----RRVWSIDFSSADPTLLASGSD---------------DGSVKLWSINQGVSIGTIKTKA 703 (879)
Q Consensus 643 ~iwd~~t~~~~~~~~~h~----~~V~si~fsp~~~~~lasgs~---------------Dg~V~iwD~~~~~~i~~~~~~~ 703 (879)
..++.............. ...+.+.+.+ ++++.++-.. +|.|..++.. ++.......-.
T Consensus 95 ~~~~~~g~~~~~~~~~~~g~~~~~pndl~~d~-~G~lyvtd~~~~~~~~~~~~~~~~~~G~v~~~~~d-g~~~~~~~~~~ 172 (314)
T d1pjxa_ 95 LVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ 172 (314)
T ss_dssp EEEETTSCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES
T ss_pred EEEECCCCEEEEEECCCCCCCCCCCCEEEECC-CCCEEEECCCCCCCCCCCCCEECCCCCEEEEEEEC-CCEEEEECCCC
T ss_conf 99947774799973343245457872789888-99899914866754320110002688438999525-74037507853
Q ss_pred CEEEEEEECCCC----CEEEEEECCCEEEEEECCCCCEEE-----EEECC-CCCCEEEEEEC-CCCEEEEEECCCCEEEE
Q ss_conf 669999628999----799999679919999857996006-----99815-78878999974-99889999769909999
Q 002801 704 NVCCVQFPLDSG----RSLAFGSADHRIYYYDLRNSKIPL-----CTLIG-HNKTVSYVKFV-DATTLVSASTDNTLKLW 772 (879)
Q Consensus 704 ~v~~v~~~p~~~----~~l~tgs~D~~I~iwDl~~~~~~~-----~~~~~-h~~~V~~i~fs-~~~~l~sgs~D~~i~iw 772 (879)
..+.++|+|+.. .++++-+..+.|+.||+....... ..+.+ .......+++. +|++.++....+.|.+|
T Consensus 173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~ 252 (314)
T d1pjxa_ 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred EEEEEEECCCCCCCEEEEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEEE
T ss_conf 22136997887763037999860243117761167654301568997133566641025783478579998279999999
Q ss_pred ECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCC-EEEEEECCCCEEEEECCCC
Q ss_conf 5699964556876079718788679999931999-9999929991999825999
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDG-YVATGSETNEVFVYHKAFP 825 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~lasgs~Dg~v~iw~~~~~ 825 (879)
|-..+ ..+..+.......++++|.|+++ .+++.+.++.|+.+++..+
T Consensus 253 dp~~g------~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~ 300 (314)
T d1pjxa_ 253 GPDGG------QPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CTTCB------SCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred ECCCC------EEEEEEECCCCCEEEEEEECCCCEEEEEECCCCCEEEEECCCC
T ss_conf 69999------7999997999987899992898999999878991999978999
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.16 E-value=7.8e-08 Score=58.66 Aligned_cols=238 Identities=9% Similarity=0.002 Sum_probs=152.1
Q ss_pred CCCCCEEEEEEECCCCCEEEE-EECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCC
Q ss_conf 358981389981789996999-6079829999868872889812478749999980399999999949994999969999
Q 002801 615 ASRSKLSSICWNSYIKSQIAS-SNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQG 693 (879)
Q Consensus 615 ~~~~~I~~i~~~~~~~~~l~s-~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~ 693 (879)
.+......+++.+. ++..++ ....+.+..++..+.........-....+.+++++ +++++++....+.+++++....
T Consensus 11 ~~~~~P~~vavd~d-G~i~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~gvav~~-~g~i~v~d~~~~~i~~~~~~~~ 88 (260)
T d1rwia_ 11 DFRLSPSGVAVDSA-GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDFNNRVVTLAAGSNN 88 (260)
T ss_dssp CSCCCEEEEEECTT-CCEEEEECSSSCEEEEEC----CEEECCCCSCCSCCCEEECT-TCCEEEEETTTEEEEECTTCSC
T ss_pred CCCCCCCEEEECCC-CCEEEEECCCCCEEEEECCCCCEEEEECCCCCCCCEEEEECC-CCCEEEEEEEECEEEEEEECCC
T ss_conf 77698788999699-999999718998899993899668974369866840899938-9988986310000355421120
Q ss_pred CEEEEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEE
Q ss_conf 14889953996699996289997999996799199998579960069981578878999974-99889999769909999
Q 002801 694 VSIGTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLW 772 (879)
Q Consensus 694 ~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iw 772 (879)
..+........+..++++++ ++++++-..+..+..++............+ ......+.+. +++.+++...++.|..+
T Consensus 89 ~~~~~~~~~~~p~~iavd~~-g~i~v~d~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~i~~~~~g~~~v~~~~~~~i~~~ 166 (260)
T d1rwia_ 89 QTVLPFDGLNYPEGLAVDTQ-GAVYVADRGNNRVVKLAAGSKTQTVLPFTG-LNDPDGVAVDNSGNVYVTDTDNNRVVKL 166 (260)
T ss_dssp CEECCCCSCCSEEEEEECTT-CCEEEEEGGGTEEEEECTTCSSCEECCCCS-CCSCCEEEECTTCCEEEEEGGGTEEEEE
T ss_pred EEEEEEEEEEECCCCCCCCC-CEEEEECCCCCCCCCCCCCCCEEEEEEECC-CCCCCEEEECCCCCEEEECCCCCCCCCC
T ss_conf 00000100000000024553-205750335553211232222012232036-6775205454899886410256433222
Q ss_pred ECCCCCCCCCCCCEEEE-ECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCE
Q ss_conf 56999645568760797-18788679999931999999992999199982599997200034799999999878789979
Q 002801 773 DLSMCTSRVIDTPLHSF-TGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFI 851 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~-~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 851 (879)
+..... ...+ .........+++.+++.++++....+.|..++...... ..+. ...-...
T Consensus 167 d~~~~~-------~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~------------~~~~~~P 226 (260)
T d1rwia_ 167 EAESNN-------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLP------------FTGLNTP 226 (260)
T ss_dssp CTTTCC-------EEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECC------------CCSCCCE
T ss_pred CCCCCE-------EEEEECCCCCCCCCCEEEEEEEEEEEECCCCEEEEEECCCCEE-EEEC------------CCCCCCE
T ss_conf 343100-------1222101147876312310001343214899899996999769-9970------------6998981
Q ss_pred EEEEEECCCCCEEEEEECCCCEEEEE
Q ss_conf 99999079993999993798499999
Q 002801 852 SSVCWRGQSSNTLVAANSSGNIKILE 877 (879)
Q Consensus 852 ~~v~~~p~~~~~l~s~~~Dg~I~iw~ 877 (879)
.+|++++++. ++++-..++.|+.++
T Consensus 227 ~~i~~d~~g~-l~vad~~~~rI~~i~ 251 (260)
T d1rwia_ 227 LAVAVDSDRT-VYVADRGNDRVVKLT 251 (260)
T ss_dssp EEEEECTTCC-EEEEEGGGTEEEEEC
T ss_pred EEEEEECCCC-EEEEECCCCEEEEEE
T ss_conf 7999908999-999979999899995
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=99.14 E-value=9.6e-08 Score=58.15 Aligned_cols=68 Identities=9% Similarity=0.114 Sum_probs=31.1
Q ss_pred EEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 99999319999999929991999825999972000347999999998787899799999907999399999379849999
Q 002801 797 NFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 797 ~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw 876 (879)
..+++..+|..+++....+.|.+|+...+..+..+..+ ...+++++|.|++..+.++.+..|.|..+
T Consensus 229 dGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p-------------~~~~t~~afg~d~~~lyVt~~~~g~i~~~ 295 (314)
T d1pjxa_ 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP-------------FEKPSNLHFKPQTKTIFVTEHENNAVWKF 295 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS-------------SSCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEEEECCCCEEEEECCCCEEEEEECCCCEEEEEEECC-------------CCCEEEEEEECCCCEEEEEECCCCCEEEE
T ss_conf 02578347857999827999999969999799999799-------------99878999928989999998789919999
Q ss_pred E
Q ss_conf 9
Q 002801 877 E 877 (879)
Q Consensus 877 ~ 877 (879)
+
T Consensus 296 ~ 296 (314)
T d1pjxa_ 296 E 296 (314)
T ss_dssp E
T ss_pred E
T ss_conf 7
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=99.10 E-value=1.5e-07 Score=57.01 Aligned_cols=225 Identities=11% Similarity=0.057 Sum_probs=113.2
Q ss_pred CEEEEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEEC----CCCEEEE
Q ss_conf 889999938999999995899299995486447676411341772358981389981789996999607----9829999
Q 002801 570 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF----EGVVQVW 645 (879)
Q Consensus 570 ~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~----dg~V~iw 645 (879)
.+-.+.|+++|++.++-...++|..|+.++... .............+++.+. +..+++... .+.+...
T Consensus 41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~~~-------~~~~~~~~~~p~gla~~~d-G~l~va~~~~~~~~~~i~~~ 112 (319)
T d2dg1a1 41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEI-------KRPFVSHKANPAAIKIHKD-GRLFVCYLGDFKSTGGIFAA 112 (319)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-------EEEEECSSSSEEEEEECTT-SCEEEEECTTSSSCCEEEEE
T ss_pred CCEECEECCCCCEEEEECCCCEEEEEECCCCEE-------EEEEECCCCCEEEEEECCC-CCEEEEECCCCCCCEEEEEE
T ss_conf 747078999999999977999999998999959-------9999489987038999999-99999956897311049987
Q ss_pred ECCCCEEEEEECC--CCCCEEEEEEECCCCCEEEEEECC------CCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCE
Q ss_conf 8688728898124--787499999803999999999499------94999969999148899539966999962899979
Q 002801 646 DVSRSQVLTEMRE--HERRVWSIDFSSADPTLLASGSDD------GSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRS 717 (879)
Q Consensus 646 d~~t~~~~~~~~~--h~~~V~si~fsp~~~~~lasgs~D------g~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~ 717 (879)
+..+......... -....+.+.+.+ +|++.++.... +.+..++............-...+.++|+|+ ++.
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~nd~~~d~-~G~l~vtd~~~~~~~~~g~v~~~~~dg~~~~~~~~~~~~pnGia~s~d-g~~ 190 (319)
T d2dg1a1 113 TENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTD-EKV 190 (319)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTT-SSE
T ss_pred CCCCCEEEEECCCCCCCCCCCCEEEEE-CCCEEECCCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEECCC-CCE
T ss_conf 389963644426777555875226773-065320013540025742157884166335788612330100010122-212
Q ss_pred -EEEEECCCEEEEEECCCCCEEEEE-------ECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEE
Q ss_conf -999967991999985799600699-------81578878999974-998899997699099995699964556876079
Q 002801 718 -LAFGSADHRIYYYDLRNSKIPLCT-------LIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHS 788 (879)
Q Consensus 718 -l~tgs~D~~I~iwDl~~~~~~~~~-------~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~ 788 (879)
+++-+..+.|+.||+......... ..........+++. +|++.++....+.|.+||- .+ +.+..
T Consensus 191 lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G------~~l~~ 263 (319)
T d2dg1a1 191 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RG------YPIGQ 263 (319)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TS------CEEEE
T ss_pred EEEECCCCCCEEEEEECCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC-CC------CEEEE
T ss_conf 787404689147999769983620246333312577641036417389999999848998999979-99------59889
Q ss_pred EE------CCCCCEEEEEEECCCCEEEEE
Q ss_conf 71------878867999993199999999
Q 002801 789 FT------GHTNVKNFVGLSVWDGYVATG 811 (879)
Q Consensus 789 ~~------~h~~~v~~v~~sp~~~~lasg 811 (879)
+. ++...+++++|.++...+++.
T Consensus 264 i~~P~~~~~~~~~~~~~~~~~~~~~~~~t 292 (319)
T d2dg1a1 264 ILIPGRDEGHMLRSTHPQFIPGTNQLIIC 292 (319)
T ss_dssp EECTTGGGTCSCBCCEEEECTTSCEEEEE
T ss_pred EECCCCCCCCCCEEEEEEEECCCCEEEEE
T ss_conf 96887577867504667780799889998
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.07 E-value=2.1e-07 Score=56.12 Aligned_cols=214 Identities=13% Similarity=0.097 Sum_probs=123.4
Q ss_pred CCCEEEEEECCCCCEEEEEECC-CC--EEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEE-EECCCCEE
Q ss_conf 9988999993899999999589-92--99995486447676411341772358981389981789996999-60798299
Q 002801 568 SNLVCSLSFDRDGELFAAAGVN-KK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIAS-SNFEGVVQ 643 (879)
Q Consensus 568 ~~~V~si~fspdg~~lat~~~d-g~--I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s-~~~dg~V~ 643 (879)
...+.+-+|||||+.||-.... +. +.+.+..... ......+........|+|. +..++. ...++...
T Consensus 38 ~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~spd-g~~i~~~~~~~~~~~ 108 (269)
T d2hqsa1 38 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPD-GSKLAFALSKTGSLN 108 (269)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTT-SSEEEEEECTTSSCE
T ss_pred CCCEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCC--------EEEEEEEECCCCCCEECCC-CCEEEEEEECCCCCC
T ss_conf 9842603887899989999815267513443113675--------0677642024543024488-986467640278641
Q ss_pred EEEC--CCCEEEEEECCCCCCEEEEEEECCCCC-EEEEEECCCC--EEEEECCCCCEEEEEECCCCEEEEEEECCCCCEE
Q ss_conf 9986--887288981247874999998039999-9999949994--9999699991488995399669999628999799
Q 002801 644 VWDV--SRSQVLTEMREHERRVWSIDFSSADPT-LLASGSDDGS--VKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSL 718 (879)
Q Consensus 644 iwd~--~t~~~~~~~~~h~~~V~si~fsp~~~~-~lasgs~Dg~--V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l 718 (879)
++.. ...... .............+++ ++. .+++...++. +.+.++..+................|+|+ +..+
T Consensus 109 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spd-g~~~ 185 (269)
T d2hqsa1 109 LYVMDLASGQIR-QVTDGRSNNTEPTWFP-DSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSD-GKFM 185 (269)
T ss_dssp EEEEETTTCCEE-ECCCCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTT-SSEE
T ss_pred EEECCCCCCCCE-EEEECCCCCCCCCCCC-CCCCCEECCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCC-CCEE
T ss_conf 000022212200-0010144211454345-544330000126874386542133100010001222234322345-4305
Q ss_pred EEEECC-C--EEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECC---CCEEEEECCCCCCCCCCCCEEEEEC
Q ss_conf 999679-9--199998579960069981578878999974-99889999769---9099995699964556876079718
Q 002801 719 AFGSAD-H--RIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTD---NTLKLWDLSMCTSRVIDTPLHSFTG 791 (879)
Q Consensus 719 ~tgs~D-~--~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D---~~i~iwd~~~~~~~~~~~~~~~~~~ 791 (879)
+..+.+ + .+.++|..... . ....+........|+ ||+.|+..+.. ..|.++++... ....+..
T Consensus 186 ~~~~~~~~~~~i~~~~~~~~~--~-~~~~~~~~~~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~-------~~~~lt~ 255 (269)
T d2hqsa1 186 VMVSSNGGQQHIAKQDLATGG--V-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR-------FKARLPA 255 (269)
T ss_dssp EEEEECSSCEEEEEEETTTCC--E-EECCCSSSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC-------CEEECCC
T ss_pred EEEEECCCCEEEEEEECCCCC--C-EEEECCCCCCCEEECCCCCEEEEEECCCCCCEEEEEECCCC-------CEEEEEC
T ss_conf 778605880125676035644--0-58506865445589899999999981799847999999999-------7799857
Q ss_pred CCCCEEEEEEEC
Q ss_conf 788679999931
Q 002801 792 HTNVKNFVGLSV 803 (879)
Q Consensus 792 h~~~v~~v~~sp 803 (879)
....+...+|||
T Consensus 256 ~~g~~~~p~WSP 267 (269)
T d2hqsa1 256 TDGQVKFPAWSP 267 (269)
T ss_dssp SSSEEEEEEECC
T ss_pred CCCCEEEEEECC
T ss_conf 998588378289
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.90 E-value=9.1e-07 Score=52.34 Aligned_cols=234 Identities=12% Similarity=0.125 Sum_probs=142.5
Q ss_pred CEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECC------CCCCEEEEEEECCCCCEEEEE-ECCCCEEEEECC
Q ss_conf 8138998178999699960798299998688728898124------787499999803999999999-499949999699
Q 002801 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMRE------HERRVWSIDFSSADPTLLASG-SDDGSVKLWSIN 691 (879)
Q Consensus 619 ~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~------h~~~V~si~fsp~~~~~lasg-s~Dg~V~iwD~~ 691 (879)
....+++.+. ++.+++-..+..|.+||.+ ++.+..+.. .......+.+....+..+++. +.++.|..++..
T Consensus 24 ~P~gvavd~d-g~i~VaD~~n~rI~v~d~~-G~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 101 (279)
T d1q7fa_ 24 EPSGVAVNAQ-NDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY 101 (279)
T ss_dssp CEEEEEECTT-CCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT
T ss_pred CCCEEEECCC-CCEEEEECCCCEEEEEECC-CCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
T ss_conf 9007999499-9899997998989999699-9999981665788664226630001234455200004775310000025
Q ss_pred CCCEEEEEEC--CCCEEEEEEECCCCCEEEEEECCCEEEEEECCCCCEEEEEE--CCCCCCEEEEEEC-CCCEEEEEECC
Q ss_conf 9914889953--99669999628999799999679919999857996006998--1578878999974-99889999769
Q 002801 692 QGVSIGTIKT--KANVCCVQFPLDSGRSLAFGSADHRIYYYDLRNSKIPLCTL--IGHNKTVSYVKFV-DATTLVSASTD 766 (879)
Q Consensus 692 ~~~~i~~~~~--~~~v~~v~~~p~~~~~l~tgs~D~~I~iwDl~~~~~~~~~~--~~h~~~V~~i~fs-~~~~l~sgs~D 766 (879)
+.....+.. -.....+++.++ ++++++....+.+.+++... + .+..+ ..+......+.+. +++.+++....
T Consensus 102 -g~~~~~~~~~~~~~p~~~avd~~-G~i~v~~~~~~~~~~~~~~g-~-~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~ 177 (279)
T d1q7fa_ 102 -GQFVRKFGATILQHPRGVTVDNK-GRIIVVECKVMRVIIFDQNG-N-VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRA 177 (279)
T ss_dssp -SCEEEEECTTTCSCEEEEEECTT-SCEEEEETTTTEEEEECTTS-C-EEEEEECTTTCSSEEEEEECSSSEEEEEEGGG
T ss_pred -CCCEEECCCCCCCCCCEECCCCC-CCEEEEEECCCEEEEECCCC-C-EEECCCCCCCCCCCCEEEECCCEEEEEEECCC
T ss_conf -63024038886425420000147-84799963263256762687-5-01002200102566243201200178620135
Q ss_pred CCEEEEECCCCCCCCCCCCEEEEE--CCCCCEEEEEEECCCCEEEEEEC-CCCEEEEECCCCCCCEECCCCCCCCCCCCC
Q ss_conf 909999569996455687607971--87886799999319999999929-991999825999972000347999999998
Q 002801 767 NTLKLWDLSMCTSRVIDTPLHSFT--GHTNVKNFVGLSVWDGYVATGSE-TNEVFVYHKAFPMPALSFNFNHADPLSGPE 843 (879)
Q Consensus 767 ~~i~iwd~~~~~~~~~~~~~~~~~--~h~~~v~~v~~sp~~~~lasgs~-Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 843 (879)
+.|.+||... ..+.++. +.......+++.++|..+++-+. +..|.+|+.. ++.+..+...
T Consensus 178 ~~V~~~d~~G-------~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~-G~~~~~~~~~--------- 240 (279)
T d1q7fa_ 178 HCVKVFNYEG-------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESK--------- 240 (279)
T ss_dssp TEEEEEETTC-------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEES---------
T ss_pred CCEEEEECCC-------CEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCC-CCEEEEEECC---------
T ss_conf 5100230479-------4445301132114876232314786999978998089999999-9999999688---------
Q ss_pred CCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEC
Q ss_conf 787899799999907999399999379849999919
Q 002801 844 TDDAAQFISSVCWRGQSSNTLVAANSSGNIKILEMV 879 (879)
Q Consensus 844 ~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw~lv 879 (879)
........|+..+++. +++ ++.+..|++|+.+
T Consensus 241 --~~~~~p~~vav~~dG~-l~V-~~~n~~v~~fr~~ 272 (279)
T d1q7fa_ 241 --VKHAQCFDVALMDDGS-VVL-ASKDYRLYIYRYV 272 (279)
T ss_dssp --SCCSCEEEEEEETTTE-EEE-EETTTEEEEEECS
T ss_pred --CCCCCEEEEEEECCCC-EEE-EECCCEEEEEEEE
T ss_conf --8889883799908991-999-9189969998722
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.76 E-value=5.3e-07 Score=53.75 Aligned_cols=172 Identities=8% Similarity=-0.036 Sum_probs=76.1
Q ss_pred CEEEEECCCCCEEEEEEC------C-CCEEEEEEECCCCCEEEEEEC-C---CEEEEEECCCCCEEEEEECCCCCCE---
Q ss_conf 499996999914889953------9-966999962899979999967-9---9199998579960069981578878---
Q 002801 684 SVKLWSINQGVSIGTIKT------K-ANVCCVQFPLDSGRSLAFGSA-D---HRIYYYDLRNSKIPLCTLIGHNKTV--- 749 (879)
Q Consensus 684 ~V~iwD~~~~~~i~~~~~------~-~~v~~v~~~p~~~~~l~tgs~-D---~~I~iwDl~~~~~~~~~~~~h~~~V--- 749 (879)
.+.++|+..+........ . .-+..+.|.|+ +++++.... + ..+.++|..+++.....-......|
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~d-~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~ 307 (465)
T d1xfda1 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATS-TKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQ 307 (465)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSS-SEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred EEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECCC-CEEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCEEECC
T ss_conf 3799836898178999525767666630456687579-938999974100301379970799927877897278517356
Q ss_pred -EEEEEC-CCCEEE--EEE-CCC--CEEEEECCCCCCCCCCCCEEEEECCCCCEEE-EEEECCCCEEE-EEECC--CCEE
Q ss_conf -999974-998899--997-699--0999956999645568760797187886799-99931999999-99299--9199
Q 002801 750 -SYVKFV-DATTLV--SAS-TDN--TLKLWDLSMCTSRVIDTPLHSFTGHTNVKNF-VGLSVWDGYVA-TGSET--NEVF 818 (879)
Q Consensus 750 -~~i~fs-~~~~l~--sgs-~D~--~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~-v~~sp~~~~la-sgs~D--g~v~ 818 (879)
....|+ +|..++ ..+ .++ .+....+...........+..+....-.|.. ++|+.+++.|. ++..+ +.-+
T Consensus 308 ~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~h 387 (465)
T d1xfda1 308 NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQ 387 (465)
T ss_dssp CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCE
T ss_pred CCCEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCEE
T ss_conf 78605746898057777654316671689983156666788626982269921997789838999999999689998268
Q ss_pred EEECCC--CCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEE
Q ss_conf 982599--9972000347999999998787899799999907999399999
Q 002801 819 VYHKAF--PMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAA 867 (879)
Q Consensus 819 iw~~~~--~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~ 867 (879)
+|.+.. +.....+. .. ........++.|+|++. +++..
T Consensus 388 ly~v~l~g~~~~~~lt--------~~--~~~~~~~~~~~~S~~~~-y~v~~ 427 (465)
T d1xfda1 388 LYSANTVGNFNRQCLS--------CD--LVENCTYFSASFSHSMD-FFLLK 427 (465)
T ss_dssp EEEECSSTTCCCBCSS--------TT--SSSSCCCCEEEECTTSS-EEEEE
T ss_pred EEEEECCCCCCCEEEC--------CC--CCCCCCEEEEEECCCCC-EEEEE
T ss_conf 9999778998605531--------44--67889879999999999-99998
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.75 E-value=3.2e-06 Score=49.14 Aligned_cols=189 Identities=11% Similarity=0.073 Sum_probs=91.4
Q ss_pred CEEEEECCCCEEEEEE------CCCCCCEEEEEEECCCCCEEEEEEC-C---CCEEEEECCCCCEEEEEEC--CCCE---
Q ss_conf 2999986887288981------2478749999980399999999949-9---9499996999914889953--9966---
Q 002801 641 VVQVWDVSRSQVLTEM------REHERRVWSIDFSSADPTLLASGSD-D---GSVKLWSINQGVSIGTIKT--KANV--- 705 (879)
Q Consensus 641 ~V~iwd~~t~~~~~~~------~~h~~~V~si~fsp~~~~~lasgs~-D---g~V~iwD~~~~~~i~~~~~--~~~v--- 705 (879)
.+.++|+.++...... .....-+..+.|++ ++..++...+ + ..+.++|..++++...+.. .+.|
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~~~~~~~~y~~~~~W~~-d~~~~~~~~nR~q~~~~i~~~d~~tg~~~~~~~e~~~~wv~~~ 307 (465)
T d1xfda1 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQ 307 (465)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCC
T ss_pred EEEEEECCCCCEEEEEECCCCCCCCCCEEEEEEECC-CCEEEEEEECCCCCCCEEEEECCCCCCEEEEEEECCCCEEECC
T ss_conf 379983689817899952576766663045668757-9938999974100301379970799927877897278517356
Q ss_pred -EEEEEECCCCCEEEE-EE-CCC--EEEEEECCC------CCEEEEEECCCCCCEEEE-EEC-CCCEE-EEEECC--CCE
Q ss_conf -999962899979999-96-799--199998579------960069981578878999-974-99889-999769--909
Q 002801 706 -CCVQFPLDSGRSLAF-GS-ADH--RIYYYDLRN------SKIPLCTLIGHNKTVSYV-KFV-DATTL-VSASTD--NTL 769 (879)
Q Consensus 706 -~~v~~~p~~~~~l~t-gs-~D~--~I~iwDl~~------~~~~~~~~~~h~~~V~~i-~fs-~~~~l-~sgs~D--~~i 769 (879)
....|.|++..+++. .+ .++ .++.+++.. ++. ...+....-.|..+ .|. +++.+ .++..+ +.-
T Consensus 308 ~~~p~~~~dg~~~~fi~~se~~g~~~ly~~~~~~~~~~~~~~~-~~~LT~G~w~V~~i~~~d~~~~~vyF~a~~~~p~~~ 386 (465)
T d1xfda1 308 NEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDN-IQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRR 386 (465)
T ss_dssp CCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCC-CCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCC
T ss_pred CCCEEECCCCCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCE-EEEECCCCCEEEEEEEECCCCCEEEEEEECCCCCCE
T ss_conf 7860574689805777765431667168998315666678862-698226992199778983899999999968999826
Q ss_pred EEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEC---CCCEEEEECCCCCCCEECC
Q ss_conf 99956999645568760797187886799999319999999929---9919998259999720003
Q 002801 770 KLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSE---TNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 770 ~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~---Dg~v~iw~~~~~~~~~~~~ 832 (879)
.+|.+...... ...++..-.........+.|||+++|++.... --.+.+++...++.+..+.
T Consensus 387 hly~v~l~g~~-~~~~lt~~~~~~~~~~~~~~S~~~~y~v~~~s~~~~P~~~~~~~~~~~~~~~Le 451 (465)
T d1xfda1 387 QLYSANTVGNF-NRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKMFDLE 451 (465)
T ss_dssp EEEEECSSTTC-CCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCC-CCEEECCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEC
T ss_conf 89999778998-605531446788987999999999999998006999849999999997999973
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=98.67 E-value=5.4e-06 Score=47.77 Aligned_cols=237 Identities=13% Similarity=0.099 Sum_probs=142.6
Q ss_pred CEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECC----CCEEEEECCCCC
Q ss_conf 8138998178999699960798299998688728898124787499999803999999999499----949999699991
Q 002801 619 KLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDD----GSVKLWSINQGV 694 (879)
Q Consensus 619 ~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~D----g~V~iwD~~~~~ 694 (879)
.+-.++|.+. ++..++-...+.|..|+..+.+....+.........+.+.+ +++++++...+ +.+...+.....
T Consensus 41 ~lEG~~~D~~-G~Ly~~D~~~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~-dG~l~va~~~~~~~~~~i~~~~~~~~~ 118 (319)
T d2dg1a1 41 QLEGLNFDRQ-GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDN 118 (319)
T ss_dssp CEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred CCEECEECCC-CCEEEEECCCCEEEEEECCCCEEEEEEECCCCCEEEEEECC-CCCEEEEECCCCCCCEEEEEECCCCCE
T ss_conf 7470789999-99999977999999998999959999948998703899999-999999956897311049987389963
Q ss_pred EEEEEEC---CCCEEEEEEECCCCCEEEEEEC------CCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEE-EEE
Q ss_conf 4889953---9966999962899979999967------99199998579960069981578878999974-99889-999
Q 002801 695 SIGTIKT---KANVCCVQFPLDSGRSLAFGSA------DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTL-VSA 763 (879)
Q Consensus 695 ~i~~~~~---~~~v~~v~~~p~~~~~l~tgs~------D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l-~sg 763 (879)
....... ...++.+.+.++ |++.++... .+.++.++..... +..+...-...+.+.|+ +++.| ++-
T Consensus 119 ~~~~~~~~~~~~~~nd~~~d~~-G~l~vtd~~~~~~~~~g~v~~~~~dg~~--~~~~~~~~~~pnGia~s~dg~~lyvad 195 (319)
T d2dg1a1 119 LQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYSTNPLGGVYYVSPDFRT--VTPIIQNISVANGIALSTDEKVLWVTE 195 (319)
T ss_dssp CEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBTTBCCEEEEEECTTSCC--EEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCCCCCCCCEEEEEC-CCEEECCCCCCCCCCCCEEEEEECCCCE--EEEEEECCCEEEEEEECCCCCEEEEEC
T ss_conf 6444267775558752267730-6532001354002574215788416633--578861233010001012221278740
Q ss_pred ECCCCEEEEECCCCCCCCC--CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCC
Q ss_conf 7699099995699964556--87607971878867999993199999999299919998259999720003479999999
Q 002801 764 STDNTLKLWDLSMCTSRVI--DTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSG 841 (879)
Q Consensus 764 s~D~~i~iwd~~~~~~~~~--~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 841 (879)
+..+.|..|++........ .............-..+++..+|.+.++....+.|.+|+- .++.+..+..+...
T Consensus 196 ~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~---- 270 (319)
T d2dg1a1 196 TTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRD---- 270 (319)
T ss_dssp GGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGG----
T ss_pred CCCCCEEEEEECCCCCEECCCCCEEEECCCCCCCEEEEEECCCCCEEEEECCCCEEEEECC-CCCEEEEEECCCCC----
T ss_conf 4689147999769983620246333312577641036417389999999848998999979-99598899688757----
Q ss_pred CCCCCCCCCEEEEEEECCCCCEEEEEEC
Q ss_conf 9878789979999990799939999937
Q 002801 842 PETDDAAQFISSVCWRGQSSNTLVAANS 869 (879)
Q Consensus 842 ~~~~~h~~~V~~v~~~p~~~~~l~s~~~ 869 (879)
.++...+++++|.++.. .+++...
T Consensus 271 ---~~~~~~~~~~~~~~~~~-~~~~t~~ 294 (319)
T d2dg1a1 271 ---EGHMLRSTHPQFIPGTN-QLIICSN 294 (319)
T ss_dssp ---GTCSCBCCEEEECTTSC-EEEEEEE
T ss_pred ---CCCCCEEEEEEEECCCC-EEEEECC
T ss_conf ---78675046677807998-8999857
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.54 E-value=1.3e-05 Score=45.51 Aligned_cols=36 Identities=6% Similarity=-0.213 Sum_probs=14.8
Q ss_pred EEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECC
Q ss_conf 7999993199999999299919998259999720003
Q 002801 796 KNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 796 v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~ 832 (879)
...+++..+|.+.++.-..+.|..|+. .++.+..+.
T Consensus 201 pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~ 236 (295)
T d2ghsa1 201 MDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE 236 (295)
T ss_dssp EEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred CCCEEECCCCCEEEEEECCCCEEEECC-CCCEEEEEC
T ss_conf 632678699998953207884688569-992866863
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.18 E-value=9.2e-05 Score=40.46 Aligned_cols=220 Identities=9% Similarity=0.018 Sum_probs=132.1
Q ss_pred EEEECC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCE
Q ss_conf 999938-9999999958992999954864476764113417723589813899817899969996079829999868872
Q 002801 573 SLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQ 651 (879)
Q Consensus 573 si~fsp-dg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~ 651 (879)
+..|++ ++.+..+--..++|..|+..+... ........+.++.+.+. +.++++ +.+ -+.++|..+++
T Consensus 22 gp~wd~~~~~l~wvDi~~~~I~r~d~~~g~~---------~~~~~~~~~~~i~~~~d-g~l~va-~~~-gl~~~d~~tg~ 89 (295)
T d2ghsa1 22 GPTFDPASGTAWWFNILERELHELHLASGRK---------TVHALPFMGSALAKISD-SKQLIA-SDD-GLFLRDTATGV 89 (295)
T ss_dssp EEEEETTTTEEEEEEGGGTEEEEEETTTTEE---------EEEECSSCEEEEEEEET-TEEEEE-ETT-EEEEEETTTCC
T ss_pred CCEEECCCCEEEEEECCCCEEEEEECCCCEE---------EEEECCCCCEEEEEECC-CCEEEE-EEC-CCEEEECCCCE
T ss_conf 8759899999999987899999998998959---------99989998179899659-988999-737-63895046451
Q ss_pred EEEEECC----CCCCEEEEEEECCCCCEEEEEECC----CCEEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEC
Q ss_conf 8898124----787499999803999999999499----94999969999148899539966999962899979999967
Q 002801 652 VLTEMRE----HERRVWSIDFSSADPTLLASGSDD----GSVKLWSINQGVSIGTIKTKANVCCVQFPLDSGRSLAFGSA 723 (879)
Q Consensus 652 ~~~~~~~----h~~~V~si~fsp~~~~~lasgs~D----g~V~iwD~~~~~~i~~~~~~~~v~~v~~~p~~~~~l~tgs~ 723 (879)
....... ....++.+.+.| +|++.++...+ +.-.+|.+..++.......-...+.+.|+++...++++.+.
T Consensus 90 ~~~l~~~~~~~~~~~~nd~~vd~-~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~dt~ 168 (295)
T d2ghsa1 90 LTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTK 168 (295)
T ss_dssp EEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETT
T ss_pred EEEEEEEECCCCCCCCEEEEECC-CCCEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEECCCCCEEEEEECC
T ss_conf 35786640478766101357979-99998874264313333057662299689986506876402465877668985156
Q ss_pred CCEEEEEECCCCC-------EEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCC
Q ss_conf 9919999857996-------0069981578878999974-9988999976990999956999645568760797187886
Q 002801 724 DHRIYYYDLRNSK-------IPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV 795 (879)
Q Consensus 724 D~~I~iwDl~~~~-------~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~ 795 (879)
.+.|+.|++.... .....+.+.......+.+. +|++.++.-..+.|..||- .+ +.+..+.-....
T Consensus 169 ~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G------~~~~~i~lP~~~ 241 (295)
T d2ghsa1 169 VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DG------NHIARYEVPGKQ 241 (295)
T ss_dssp TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TC------CEEEEEECSCSB
T ss_pred CCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCEEEEEECCCCEEEECC-CC------CEEEEECCCCCC
T ss_conf 63246764535555324535788416755566632678699998953207884688569-99------286686389985
Q ss_pred EEEEEEE-CCCC-EEEEEE
Q ss_conf 7999993-1999-999992
Q 002801 796 KNFVGLS-VWDG-YVATGS 812 (879)
Q Consensus 796 v~~v~~s-p~~~-~lasgs 812 (879)
+++++|- ++.. .++|..
T Consensus 242 ~T~~~FGG~d~~~LyvTta 260 (295)
T d2ghsa1 242 TTCPAFIGPDASRLLVTSA 260 (295)
T ss_dssp EEEEEEESTTSCEEEEEEB
T ss_pred EEEEEEECCCCCEEEEEEC
T ss_conf 2798982899999999978
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.66 E-value=0.0008 Score=34.88 Aligned_cols=72 Identities=14% Similarity=0.062 Sum_probs=37.6
Q ss_pred CEEEEEECCCCEEEEEECC--CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCC
Q ss_conf 7899997499889999769--90999956999645568760797187886799999319999999929991999825999
Q 002801 748 TVSYVKFVDATTLVSASTD--NTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFP 825 (879)
Q Consensus 748 ~V~~i~fs~~~~l~sgs~D--~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~ 825 (879)
......+.....+.....+ ..|.++|+.... ...+..+.. .....|+|+|+.|+-.. ++.++++++..+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-------~~~lt~~~~-~~~~~~SpDG~~I~f~~-~~~l~~~d~~~g 263 (281)
T d1k32a2 193 HVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKD-------LRKHTSFTD-YYPRHLNTDGRRILFSK-GGSIYIFNPDTE 263 (281)
T ss_dssp CCEEEEEETTEEEEEECTTSSCEEEEEETTSCS-------CEECCCCCS-SCEEEEEESSSCEEEEE-TTEEEEECTTTC
T ss_pred CCCEEEEECCCCCEECCCCCCCCEEEEECCCCC-------EEEEECCCC-CCCCCCCCCCCEEEEEE-CCEEEEEECCCC
T ss_conf 642133103532000113455212899689996-------598105898-64432867989999985-999999989999
Q ss_pred CCC
Q ss_conf 972
Q 002801 826 MPA 828 (879)
Q Consensus 826 ~~~ 828 (879)
+..
T Consensus 264 ~~~ 266 (281)
T d1k32a2 264 KIE 266 (281)
T ss_dssp CEE
T ss_pred CEE
T ss_conf 878
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=97.28 E-value=0.0025 Score=31.99 Aligned_cols=20 Identities=20% Similarity=0.252 Sum_probs=11.4
Q ss_pred CCCCEEEEEECCCCCEEEEE
Q ss_conf 99988999993899999999
Q 002801 567 SSNLVCSLSFDRDGELFAAA 586 (879)
Q Consensus 567 h~~~V~si~fspdg~~lat~ 586 (879)
+...+....|||||+.||-.
T Consensus 39 ~~~~~~~p~~SPDG~~iaf~ 58 (281)
T d1k32a2 39 NLGVINNARFFPDGRKIAIR 58 (281)
T ss_dssp SSSEEEEEEECTTSSEEEEE
T ss_pred CCCCCCCEEECCCCCEEEEE
T ss_conf 99852677987899989999
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.11 E-value=0.0037 Score=30.92 Aligned_cols=201 Identities=9% Similarity=-0.048 Sum_probs=83.1
Q ss_pred CEEEEEEECCCCCEEEEE-ECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEE
Q ss_conf 813899817899969996-0798299998688728898124787499999803999999999499949999699991488
Q 002801 619 KLSSICWNSYIKSQIASS-NFEGVVQVWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIG 697 (879)
Q Consensus 619 ~I~~i~~~~~~~~~l~s~-~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~ 697 (879)
.+..++|... .+.|+.+ ..++.|...+++.......+...-..+..+++....+++.++-...+.|.+.++.......
T Consensus 37 ~~~~ld~D~~-~~~iywsd~~~~~I~~~~l~g~~~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~dg~~~~~ 115 (263)
T d1npea_ 37 VIIGLAFDCV-DKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (263)
T ss_dssp EEEEEEEETT-TTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CEEEEEEEEC-CCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCEEEE
T ss_conf 5799999858-999999989999199997665872898870126420799963688688842678979988058816777
Q ss_pred EEEC-CCCEEEEEEECCCCCEEEEEECC--CEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEE-EEEECCCCEEEE
Q ss_conf 9953-99669999628999799999679--9199998579960069981578878999974-99889-999769909999
Q 002801 698 TIKT-KANVCCVQFPLDSGRSLAFGSAD--HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTL-VSASTDNTLKLW 772 (879)
Q Consensus 698 ~~~~-~~~v~~v~~~p~~~~~l~tgs~D--~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l-~sgs~D~~i~iw 772 (879)
.+.. -..+..++++|..+.++.+-... ..|...++..... .......-.....+.+. .++.| .+-...+.|...
T Consensus 116 l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~-~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~ 194 (263)
T d1npea_ 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (263)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EECCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEECCCCCCC-EEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEE
T ss_conf 7125666872799925669279953489976899966789972-365530355553079950475899992899999999
Q ss_pred ECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCE
Q ss_conf 569996455687607971878867999993199999999299919998259999720
Q 002801 773 DLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPAL 829 (879)
Q Consensus 773 d~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~ 829 (879)
++.... ....+.+... ...+++. .+....+-...+.|...++..++.+.
T Consensus 195 ~~~g~~------~~~v~~~~~~-P~~lav~-~~~lYwtd~~~~~I~~~~~~~g~~~~ 243 (263)
T d1npea_ 195 NPAQPG------RRKVLEGLQY-PFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMD 243 (263)
T ss_dssp ETTEEE------EEEEEECCCS-EEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ECCCCC------EEEEECCCCC-CEEEEEE-CCEEEEEECCCCEEEEEECCCCCCCE
T ss_conf 999997------6999889998-6899999-99999999999979999898995106
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.06 E-value=0.0042 Score=30.63 Aligned_cols=249 Identities=10% Similarity=0.076 Sum_probs=124.8
Q ss_pred EECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEEEC--CCCCEEEEEECCC------------------CEEEE
Q ss_conf 240444681689850475797872135345899988999993--8999999995899------------------29999
Q 002801 536 WINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFD--RDGELFAAAGVNK------------------KIKVF 595 (879)
Q Consensus 536 ~l~~~~d~~i~~w~~~~~~~~~~l~~~~l~~h~~~V~si~fs--pdg~~lat~~~dg------------------~I~iw 595 (879)
|+..-.++-+.+-++.++++...+.. .....+..+... |+..+++..+.+. .+.++
T Consensus 103 FVNDkan~RVAvIdl~~fkt~kIi~i----Pn~~~~HG~r~~~~p~T~YV~~~~e~~vP~pndg~~l~d~~~y~~~~t~I 178 (459)
T d1fwxa2 103 FMNDKANTRVARVRCDVMKCDAILEI----PNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 178 (459)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEEC----SSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGG-EEEEEEEE
T ss_pred EEECCCCCEEEEEECCCEEEEEEEEC----CCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHCCEEEEEE
T ss_conf 99758986389998854056679966----78877750120257974799736765444599985132401122689999
Q ss_pred ECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCC--EEEEECCCCEEEEEECCCCCCEEEEEEECC--
Q ss_conf 5486447676411341772358981389981789996999607982--999986887288981247874999998039--
Q 002801 596 ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV--VQVWDVSRSQVLTEMREHERRVWSIDFSSA-- 671 (879)
Q Consensus 596 d~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~--V~iwd~~t~~~~~~~~~h~~~V~si~fsp~-- 671 (879)
|.++. ... ....-...+..+.+++. +.++++.+++.. +.+.++... ..-+.+.|+..
T Consensus 179 D~~tm-----~V~---~QV~V~g~ld~~~~s~d-GK~af~TsyNSE~g~~l~e~ta~----------e~D~i~V~n~~ri 239 (459)
T d1fwxa2 179 DADKW-----EVA---WQVLVSGNLDNCDADYE-GKWAFSTSYNSEKGMTLPEMTAA----------EMDHIVVFNIAEI 239 (459)
T ss_dssp ETTTT-----EEE---EEEEESSCCCCEEECSS-SSEEEEEESCTTCCSSHHHHTCC----------SEEEEEEEEHHHH
T ss_pred ECCCC-----EEE---EEEEECCCHHCCCCCCC-CCEEEEEECCCCCCCCHHHCCCC----------CCEEEEEECHHHH
T ss_conf 66776-----698---99640897201531899-99899971355688532222524----------5418999634886
Q ss_pred -----CCCEEEEEECCCCEEEEECCCC---CEEEEEECCCCEEEEEEECCCCCEEEEEE-CCCEEEEEECCCCCE-----
Q ss_conf -----9999999949994999969999---14889953996699996289997999996-799199998579960-----
Q 002801 672 -----DPTLLASGSDDGSVKLWSINQG---VSIGTIKTKANVCCVQFPLDSGRSLAFGS-ADHRIYYYDLRNSKI----- 737 (879)
Q Consensus 672 -----~~~~lasgs~Dg~V~iwD~~~~---~~i~~~~~~~~v~~v~~~p~~~~~l~tgs-~D~~I~iwDl~~~~~----- 737 (879)
+++.--. +.+.+.|.+.. ..+..+........+..+|+ |.++++++ .+.++-++|+++...
T Consensus 240 e~av~~Gk~~ei----ngV~VVD~~~~~~~~v~~yIPVpKsPHGV~vSPD-GKyi~VaGKLs~tVSViD~~Ki~~~~~~~ 314 (459)
T d1fwxa2 240 EKAIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPD-KKHLCVAGKLSPTVTVLDVTRFDAVFYEN 314 (459)
T ss_dssp HHHHHHTCSEEE----TTEEEEECSGG--CSSEEEEEEESSCCCEEECTT-SSEEEEECTTSSBEEEEEGGGHHHHHHSC
T ss_pred HHHHHCCCCEEE----CCCEEECCCCCCCCCEEEEEECCCCCCCEEECCC-CCEEEEECCCCCCEEEEEEHHHHHHHCCC
T ss_conf 876405993796----9946615423678520389865898773388999-97899938858957999822535665046
Q ss_pred -----EEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCC----CCCCCCCEEEEECCCCCEEE-E----EEE
Q ss_conf -----069981578878999974-99889999769909999569996----45568760797187886799-9----993
Q 002801 738 -----PLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCT----SRVIDTPLHSFTGHTNVKNF-V----GLS 802 (879)
Q Consensus 738 -----~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~----~~~~~~~~~~~~~h~~~v~~-v----~~s 802 (879)
.+.......-.-....|. .|+-..|---|..|.-|++.... .......+..+.-|-++--. . ...
T Consensus 315 ~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~~~~~~~~~~~~~~~~v~~k~~v~y~~gh~~~~~g~t~~ 394 (459)
T d1fwxa2 315 ADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLD 394 (459)
T ss_dssp C-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTT
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCC
T ss_conf 88452179611357676620338984299986123169997344055664466677311354334578877457678678
Q ss_pred CCCCEEEEEE
Q ss_conf 1999999992
Q 002801 803 VWDGYVATGS 812 (879)
Q Consensus 803 p~~~~lasgs 812 (879)
|+|+||++..
T Consensus 395 ~dgk~l~~~n 404 (459)
T d1fwxa2 395 ATNDWLVCLS 404 (459)
T ss_dssp CCSSEEEEEE
T ss_pred CCCCEEEEEC
T ss_conf 8887899803
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=97.03 E-value=0.0045 Score=30.43 Aligned_cols=71 Identities=13% Similarity=0.102 Sum_probs=28.4
Q ss_pred EEEEEECCCCCEEEEEECC-CCEEEEECCCCEEEEEECCC-CCCEEEEEEECCCCCEEEEEECC------CCEEEEECCC
Q ss_conf 3899817899969996079-82999986887288981247-87499999803999999999499------9499996999
Q 002801 621 SSICWNSYIKSQIASSNFE-GVVQVWDVSRSQVLTEMREH-ERRVWSIDFSSADPTLLASGSDD------GSVKLWSINQ 692 (879)
Q Consensus 621 ~~i~~~~~~~~~l~s~~~d-g~V~iwd~~t~~~~~~~~~h-~~~V~si~fsp~~~~~lasgs~D------g~V~iwD~~~ 692 (879)
....+.+ ++.+++.|+.+ ..+.+||..+.+....-... ...-.++...+ ++.+++.|+.+ ..+.+||..+
T Consensus 79 ~~~~~~~-~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~-dG~v~v~GG~~~~~~~~~~v~~yd~~~ 156 (387)
T d1k3ia3 79 PGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSS 156 (387)
T ss_dssp CEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred EEEEEEC-CCCEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCEEEEC-CCCEEEECCCCCCCCCCCEEEEECCCC
T ss_conf 6899946-88689863688862167567557442156566421013035531-782665213663335432056634888
Q ss_pred C
Q ss_conf 9
Q 002801 693 G 693 (879)
Q Consensus 693 ~ 693 (879)
.
T Consensus 157 ~ 157 (387)
T d1k3ia3 157 K 157 (387)
T ss_dssp T
T ss_pred C
T ss_conf 9
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.91 E-value=0.0057 Score=29.82 Aligned_cols=34 Identities=9% Similarity=-0.048 Sum_probs=24.1
Q ss_pred ECCCCEEEEEECCCCEEEEECCCCCCCEECCCCC
Q ss_conf 3199999999299919998259999720003479
Q 002801 802 SVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 802 sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~ 835 (879)
+..+..+..|+.|+.++.+|.++++.+-+++.+.
T Consensus 472 ~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~ 505 (571)
T d2ad6a1 472 YTKGGLVWYATLDGYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EECCCEEEEECCCCEEEEEECCCCCEEEEEECCC
T ss_conf 9669979997789969999999986878998999
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.82 E-value=0.00089 Score=34.60 Aligned_cols=46 Identities=13% Similarity=-0.099 Sum_probs=31.1
Q ss_pred CCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 3445752888760885334530699998785688999999999998521037
Q 002801 51 EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 51 ~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
+.....|++|++.+|.++.+.... ......+..++...+..+|+..
T Consensus 80 ~~~~~~~lv~~~l~G~~~~~~~~~------~~~~~~~~~~l~~~l~~lH~~~ 125 (263)
T d1j7la_ 80 RHDGWSNLLMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSID 125 (263)
T ss_dssp EETTEEEEEEECCSSEEHHHHTTT------CSCHHHHHHHHHHHHHHHHTSC
T ss_pred ECCCCEEEEEEECCCCCCCCCCCC------CCCHHHHHHHHHHHHHHHHCCC
T ss_conf 508964999986043343543344------0269999998999999985568
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.82 E-value=0.0068 Score=29.37 Aligned_cols=255 Identities=12% Similarity=0.121 Sum_probs=155.6
Q ss_pred CCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEE
Q ss_conf 92999954864476764113417723589813899817899969996079829999868872889812478749999980
Q 002801 590 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSRSQVLTEMREHERRVWSIDFS 669 (879)
Q Consensus 590 g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t~~~~~~~~~h~~~V~si~fs 669 (879)
..+.|.|+...... ...| + .--+.-.+|. ...|+.-+ ..++.++|+++.+.++.+.- ...|.--.|-
T Consensus 45 ~~VvIidl~n~~~~---~Rrp---i----~AdsAIMhP~-~~IiALra-g~~LQiFnletK~klks~~~-~e~VvfWkWi 111 (327)
T d1utca2 45 AQVVIIDMNDPSNP---IRRP---I----SADSAIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWI 111 (327)
T ss_dssp EEEEEEETTSTTSC---EEEE---C----CCSEEEECSS-SSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEES
T ss_pred CEEEEEECCCCCCC---EECC---C----CHHHHHCCCC-CCEEEEEC-CCEEEEEEHHHHHHHCEEEC-CCCCEEEEEC
T ss_conf 43999988998763---3144---3----6166530888-75799962-88689984468221115876-8885799944
Q ss_pred CCCCCEEEEEECCCCEEEEECCCC-CEEEEEECC-----CCEEEEEEECCCCCEEEEEE------CCCEEEEEECCCCCE
Q ss_conf 399999999949994999969999-148899539-----96699996289997999996------799199998579960
Q 002801 670 SADPTLLASGSDDGSVKLWSINQG-VSIGTIKTK-----ANVCCVQFPLDSGRSLAFGS------ADHRIYYYDLRNSKI 737 (879)
Q Consensus 670 p~~~~~lasgs~Dg~V~iwD~~~~-~~i~~~~~~-----~~v~~v~~~p~~~~~l~tgs------~D~~I~iwDl~~~~~ 737 (879)
+.+.|+.... ..|+-|++... .+.+.+.-+ ..|..-..+++...++++|- -.|.+.+|......
T Consensus 112 --s~~~L~lVT~-taVYHW~~~g~s~P~k~fdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~- 187 (327)
T d1utca2 112 --SLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV- 187 (327)
T ss_dssp --SSSEEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-
T ss_pred --CCCEEEEECC-CCEEEECCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEEEEEECCCC-
T ss_conf --7988999918-816997356999852662321012486389989899998899995713788305888899802286-
Q ss_pred EEEEECCCCCCEEEEEEC-C---CCEEEEEE---CCCCEEEEECCCCCC---CCCCCCEEEEECC---CCCEEEEEEECC
Q ss_conf 069981578878999974-9---98899997---699099995699964---5568760797187---886799999319
Q 002801 738 PLCTLIGHNKTVSYVKFV-D---ATTLVSAS---TDNTLKLWDLSMCTS---RVIDTPLHSFTGH---TNVKNFVGLSVW 804 (879)
Q Consensus 738 ~~~~~~~h~~~V~~i~fs-~---~~~l~sgs---~D~~i~iwd~~~~~~---~~~~~~~~~~~~h---~~~v~~v~~sp~ 804 (879)
...+.||......++.. + ...++.+. ..+++++-++..... ....+.+..+... .+--.++..|+.
T Consensus 188 -sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~k 266 (327)
T d1utca2 188 -SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEK 266 (327)
T ss_dssp -EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETT
T ss_pred -CCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECC
T ss_conf -7523203465688870799887309999987898747999986887557888753268877796346884779996433
Q ss_pred CCEEEEEECCCCEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEE
Q ss_conf 999999929991999825999972000347999999998787899799999907999399999379849999
Q 002801 805 DGYVATGSETNEVFVYHKAFPMPALSFNFNHADPLSGPETDDAAQFISSVCWRGQSSNTLVAANSSGNIKIL 876 (879)
Q Consensus 805 ~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l~s~~~Dg~I~iw 876 (879)
.+.+..-+.-|.+++||+.++..+..-+.... .|-..|-+.+.. -+++.+.+|.+.--
T Consensus 267 ygiiyviTK~G~i~lyDleTgt~i~~nRIs~~-------------~iF~~a~~~~~~-Gi~~VNr~GqVl~v 324 (327)
T d1utca2 267 HDVVFLITKYGYIHLYDLETGTCIYMNRISGE-------------TIFVTAPHEATA-GIIGVNRKGQVLSV 324 (327)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSS-------------CEEEEEEETTTT-EEEEEETTSEEEEE
T ss_pred CCEEEEEECCCEEEEEECCCCCEEEEEECCCC-------------CEEEECCCCCCC-EEEEECCCCEEEEE
T ss_conf 79999996675899997566628999404788-------------448962678886-08998789769999
|
| >d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Nidogen species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.77 E-value=0.0074 Score=29.17 Aligned_cols=200 Identities=10% Similarity=-0.032 Sum_probs=117.4
Q ss_pred CCEEEEEECCCCCEEEE-EECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEEC
Q ss_conf 98899999389999999-95899299995486447676411341772358981389981789996999607982999986
Q 002801 569 NLVCSLSFDRDGELFAA-AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (879)
Q Consensus 569 ~~V~si~fspdg~~lat-~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~ 647 (879)
..+.+++|+...+.+.- -..++.|+..+++..... .+.......+.++++....+....+-...+.|.+.++
T Consensus 36 ~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~~~-------~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~~ 108 (263)
T d1npea_ 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-------TIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKM 108 (263)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-------EEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCEEEEEEEECCCEEEEEECCCCEEEEEECCCCCCE-------EEEEECCCCCCEEEEECCCCEEEEECCCCCEEEEEEC
T ss_conf 757999998589999999899991999976658728-------9887012642079996368868884267897998805
Q ss_pred CCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCC--EEEEECCCCCEEEEEE-CCCCEEEEEEECCCCCEEEEEECC
Q ss_conf 8872889812478749999980399999999949994--9999699991488995-399669999628999799999679
Q 002801 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGS--VKLWSINQGVSIGTIK-TKANVCCVQFPLDSGRSLAFGSAD 724 (879)
Q Consensus 648 ~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~--V~iwD~~~~~~i~~~~-~~~~v~~v~~~p~~~~~l~tgs~D 724 (879)
........+...-..+..+.+.|..+.++.+-...+. |.--++.......... .-.....+++++..+.++.+-...
T Consensus 109 dg~~~~~l~~~~l~~p~~l~vdp~~g~ly~t~~~~~~~~I~r~~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~ 188 (263)
T d1npea_ 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT 188 (263)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEECCCCCCCCEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCEEEEEECCCCCCEEEEEECCCEEEEEECCC
T ss_conf 88167777125666872799925669279953489976899966789972365530355553079950475899992899
Q ss_pred CEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCC
Q ss_conf 91999985799600699815788789999749988999976990999956999
Q 002801 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMC 777 (879)
Q Consensus 725 ~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs~~~~l~sgs~D~~i~iwd~~~~ 777 (879)
+.|...|+..... ...+.+-..+ ..+.+..+.+..+-...+.|...|..++
T Consensus 189 ~~I~~~~~~g~~~-~~v~~~~~~P-~~lav~~~~lYwtd~~~~~I~~~~~~~g 239 (263)
T d1npea_ 189 HRAECLNPAQPGR-RKVLEGLQYP-FAVTSYGKNLYYTDWKTNSVIAMDLAIS 239 (263)
T ss_dssp TEEEEEETTEEEE-EEEEECCCSE-EEEEEETTEEEEEETTTTEEEEEETTTT
T ss_pred CEEEEEECCCCCE-EEEECCCCCC-EEEEEECCEEEEEECCCCEEEEEECCCC
T ss_conf 9999999999976-9998899986-8999999999999999997999989899
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.60 E-value=0.00066 Score=35.37 Aligned_cols=52 Identities=12% Similarity=-0.016 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 5678987763444344575288876088533453069999878568899999999999852103
Q 002801 38 LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 101 (879)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~ 101 (879)
.++...+. ++. .....|++|++++|.++.+.. ... ..+..++...+.-||+.
T Consensus 66 vpvP~v~~-~~~--~~~~~~~v~~~i~G~~~~~~~------~~~---~~~~~~l~~~la~LH~~ 117 (255)
T d1nd4a_ 66 VPCAAVLD-VVT--EAGRDWLLLGEVPGQDLLSSH------LAP---AEKVSIMADAMRRLHTL 117 (255)
T ss_dssp CCBCCEEE-EEE--CSSCEEEEEECCSSEETTTSC------CCH---HHHHHHHHHHHHHHTTS
T ss_pred CCCCCEEE-ECC--CCCCEEEEEEEEECCCCCCCC------CCH---HHHHHHHHHHHHHHCCC
T ss_conf 99886132-224--566159998744135543221------268---99999999999987368
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=96.51 E-value=0.011 Score=28.08 Aligned_cols=83 Identities=16% Similarity=0.086 Sum_probs=47.8
Q ss_pred CCEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCC-CEEEEEEE
Q ss_conf 99199998579960069981578878999974998899997699099995699964556876079718788-67999993
Q 002801 724 DHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN-VKNFVGLS 802 (879)
Q Consensus 724 D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s 802 (879)
.+.+..+|+.+++.......+.. ......-..+.+++.++.|+.++.+|..++ +.+.++.-... ...-+.+.
T Consensus 443 ~G~l~AiD~~TG~~~W~~~~~~~-~~~g~l~TagglVf~G~~dg~l~A~Da~tG------e~lW~~~l~~~~~a~P~ty~ 515 (571)
T d2ad6a1 443 MGQIRAFDLTTGKAKWTKWEKFA-AWGGTLYTKGGLVWYATLDGYLKALDNKDG------KELWNFKMPSGGIGSPMTYS 515 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSC-CCSBCEEETTTEEEEECTTSEEEEEETTTC------CEEEEEECSSCCCSCCEEEE
T ss_pred CCCEEEECCCCCCEEEECCCCCC-CCCCEEEECCCEEEEECCCCEEEEEECCCC------CEEEEEECCCCCEECCEEEE
T ss_conf 56178853677846427678999-875605966997999778996999999998------68789989999651564898
Q ss_pred CCCC-EEEEEEC
Q ss_conf 1999-9999929
Q 002801 803 VWDG-YVATGSE 813 (879)
Q Consensus 803 p~~~-~lasgs~ 813 (879)
.+|+ ||+....
T Consensus 516 ~dGkqYi~v~~g 527 (571)
T d2ad6a1 516 FKGKQYIGSMYG 527 (571)
T ss_dssp ETTEEEEEEEEC
T ss_pred ECCEEEEEEEEC
T ss_conf 899999999906
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=96.50 E-value=0.011 Score=28.06 Aligned_cols=62 Identities=16% Similarity=0.103 Sum_probs=37.9
Q ss_pred CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCCC
Q ss_conf 909999569996455687607971878867999993199999999299919998259999720003479
Q 002801 767 NTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 767 ~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~ 835 (879)
+.|..||+.+++ .+-.+.. ......-.++..+..+..|+.|+.++.+|..+++.+-+++.+.
T Consensus 438 G~l~A~D~~tGk------~~W~~~~-~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~~~l~~ 499 (560)
T d1kv9a2 438 GALLAWDPVKQK------AAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (560)
T ss_dssp EEEEEEETTTTE------EEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CCEEEEECCCCE------EEEECCC-CCCCCCCEEEECCCEEEEECCCCCEEEEECCCCCEEEEEECCC
T ss_conf 646887077883------7310257-8888774059879989997789819999999985827998999
|
| >d1fwxa2 b.69.3.1 (A:8-451) Nitrous oxide reductase, N-terminal domain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Paracoccus denitrificans [TaxId: 266]
Probab=96.16 E-value=0.018 Score=26.89 Aligned_cols=75 Identities=8% Similarity=-0.032 Sum_probs=35.5
Q ss_pred EEEEEEC-CCCEEEEEE-CCCCEEEEECCCCCCCC-----CCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEE
Q ss_conf 8999974-998899997-69909999569996455-----6876079718788679999931999999992999199982
Q 002801 749 VSYVKFV-DATTLVSAS-TDNTLKLWDLSMCTSRV-----IDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYH 821 (879)
Q Consensus 749 V~~i~fs-~~~~l~sgs-~D~~i~iwd~~~~~~~~-----~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~ 821 (879)
...+..+ ||++++.++ .+.++.++|+....... ....+..-....-.-...+|...|....+---|..|.-|+
T Consensus 277 PHGV~vSPDGKyi~VaGKLs~tVSViD~~Ki~~~~~~~~~~~~~~~~e~elglgPLht~fd~~g~aytslfids~v~kw~ 356 (459)
T d1fwxa2 277 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWN 356 (459)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-GGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEE
T ss_pred CCCEEECCCCCEEEEECCCCCCEEEEEEHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEE
T ss_conf 77338899997899938858957999822535665046884521796113576766203389842999861231699973
Q ss_pred CC
Q ss_conf 59
Q 002801 822 KA 823 (879)
Q Consensus 822 ~~ 823 (879)
+.
T Consensus 357 ~~ 358 (459)
T d1fwxa2 357 IE 358 (459)
T ss_dssp HH
T ss_pred CC
T ss_conf 44
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=96.12 E-value=0.019 Score=26.79 Aligned_cols=139 Identities=13% Similarity=0.074 Sum_probs=71.9
Q ss_pred CEEEEEECCCEEE--EEECCCCCCCCCCCEEEEEECCCCCEEEEEECC-CCEEEEECCCCCCCCCCCCCCEEEECCCCCE
Q ss_conf 1689850475797--872135345899988999993899999999589-9299995486447676411341772358981
Q 002801 544 LCKYLSFSKLRVK--ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECDAIINENRDIHYPVVEMASRSKL 620 (879)
Q Consensus 544 ~i~~w~~~~~~~~--~~l~~~~l~~h~~~V~si~fspdg~~lat~~~d-g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I 620 (879)
.+.+||..+..-. ..... .+.....+..+.+++.+++.|+.+ ..+.+||..+.. +.. ...+.....-
T Consensus 53 ~~~~yd~~t~~w~~~~~~~~----~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~----w~~--~~~~~~~r~~ 122 (387)
T d1k3ia3 53 LTSSWDPSTGIVSDRTVTVT----KHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS----WIP--GPDMQVARGY 122 (387)
T ss_dssp EEEEECTTTCCBCCCEEEEC----SCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE----EEE--CCCCSSCCSS
T ss_pred EEEEEECCCCCEEECCCCCC----CCCCCEEEEEEECCCCEEEEECCCCCCEEEECCCCCC----CCC--CCCCCCCCCC
T ss_conf 89999888896866677898----7445256899946886898636888621675675574----421--5656642101
Q ss_pred EEEEEECCCCCEEEEEECC------CCEEEEECCCCEEEEEECC---------CC------CCEEEEEEECCCCCEEEEE
Q ss_conf 3899817899969996079------8299998688728898124---------78------7499999803999999999
Q 002801 621 SSICWNSYIKSQIASSNFE------GVVQVWDVSRSQVLTEMRE---------HE------RRVWSIDFSSADPTLLASG 679 (879)
Q Consensus 621 ~~i~~~~~~~~~l~s~~~d------g~V~iwd~~t~~~~~~~~~---------h~------~~V~si~fsp~~~~~lasg 679 (879)
.+.+..+ ++..++.++.+ ..+.+||..+.+-...-.. +. .... +...+ ++..++.+
T Consensus 123 ~~~~~~~-dG~v~v~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~G~~~~~g 199 (387)
T d1k3ia3 123 QSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAW-LFGWK-KGSVFQAG 199 (387)
T ss_dssp CEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCC-EEECG-GGCEEECC
T ss_pred CCEEEEC-CCCEEEECCCCCCCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEECCCEEE-EEEEC-CCCEEEEC
T ss_conf 3035531-782665213663335432056634888955115887644311346651365042269-99707-98778746
Q ss_pred ECCCCEEEEECCCCCE
Q ss_conf 4999499996999914
Q 002801 680 SDDGSVKLWSINQGVS 695 (879)
Q Consensus 680 s~Dg~V~iwD~~~~~~ 695 (879)
..++.+.+++..+...
T Consensus 200 ~~~~~~~~~~~~~~~~ 215 (387)
T d1k3ia3 200 PSTAMNWYYTSGSGDV 215 (387)
T ss_dssp SSSEEEEEECSTTCEE
T ss_pred CCCCCEEECCCCCCCE
T ss_conf 8677478148666717
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.76 E-value=0.027 Score=25.84 Aligned_cols=227 Identities=12% Similarity=0.151 Sum_probs=126.7
Q ss_pred EEEECCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCC-CE
Q ss_conf 99993899999999589929999548644767641134177235898138998178999699960798299998688-72
Q 002801 573 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDVSR-SQ 651 (879)
Q Consensus 573 si~fspdg~~lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~~t-~~ 651 (879)
+.--+|....+|--+ ..++.||++++.. .+........|.-=.|-. .+.|+-.+ +..|+.|+++. .+
T Consensus 67 sAIMhP~~~IiALra-g~~LQiFnletK~--------klks~~~~e~VvfWkWis--~~~L~lVT-~taVYHW~~~g~s~ 134 (327)
T d1utca2 67 SAIMNPASKVIALKA-GKTLQIFNIEMKS--------KMKAHTMTDDVTFWKWIS--LNTVALVT-DNAVYHWSMEGESQ 134 (327)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTE--------EEEEEECSSCCCEEEESS--SSEEEEEC-SSEEEEEESSSSCC
T ss_pred HHHCCCCCCEEEEEC-CCEEEEEEHHHHH--------HHCEEECCCCCEEEEECC--CCEEEEEC-CCCEEEECCCCCCC
T ss_conf 653088875799962-8868998446822--------111587688857999447--98899991-88169973569998
Q ss_pred EEEEECCCC----CCEEEEEEECCCCCEEEEEE---C----CCCEEEEECCCCCEEEEEECCCCE-EEEEE--ECCCCCE
Q ss_conf 889812478----74999998039999999994---9----994999969999148899539966-99996--2899979
Q 002801 652 VLTEMREHE----RRVWSIDFSSADPTLLASGS---D----DGSVKLWSINQGVSIGTIKTKANV-CCVQF--PLDSGRS 717 (879)
Q Consensus 652 ~~~~~~~h~----~~V~si~fsp~~~~~lasgs---~----Dg~V~iwD~~~~~~i~~~~~~~~v-~~v~~--~p~~~~~ 717 (879)
+.+.+..|. ..|-.-..++ +.+.++..+ . .|.+.+|..+... -+.++.++.. ..+.. .+....+
T Consensus 135 P~k~fdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~i~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~l 212 (327)
T d1utca2 135 PVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTL 212 (327)
T ss_dssp CEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEE
T ss_pred CHHHHHHCCCCCCCEEEEEEECC-CCCEEEEEEEECCCCCEEEEEEEEEECCCC-CCCCCCEEEEEEEEECCCCCCCCEE
T ss_conf 52662321012486389989899-998899995713788305888899802286-7523203465688870799887309
Q ss_pred EEEEEC---CCEEEEEECCCCC---EE--EE---EECCC---CCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf 999967---9919999857996---00--69---98157---8878999974-998899997699099995699964556
Q 002801 718 LAFGSA---DHRIYYYDLRNSK---IP--LC---TLIGH---NKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVI 782 (879)
Q Consensus 718 l~tgs~---D~~I~iwDl~~~~---~~--~~---~~~~h---~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~ 782 (879)
++.+.. .+.+++.++.... .+ .. .+... .+--.++..+ .-..+..-+.-|.+.+||+.++
T Consensus 213 f~fa~r~~~~~kLhIiEig~~~~g~~~f~kk~vdi~fppea~~DFPvamqvs~kygiiyviTK~G~i~lyDleTg----- 287 (327)
T d1utca2 213 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETG----- 287 (327)
T ss_dssp EEEEEEETTEEEEEEEECSCCCTTCCCCCCEEEECCCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTC-----
T ss_pred EEEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCCEEEEEECCCEEEEEECCCC-----
T ss_conf 999987898747999986887557888753268877796346884779996433799999966758999975666-----
Q ss_pred CCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEE
Q ss_conf 8760797187886799999319999999929991999
Q 002801 783 DTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFV 819 (879)
Q Consensus 783 ~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~i 819 (879)
.++..-+-....+...+-+.+..-+++...+|.|..
T Consensus 288 -t~i~~nRIs~~~iF~~a~~~~~~Gi~~VNr~GqVl~ 323 (327)
T d1utca2 288 -TCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 323 (327)
T ss_dssp -CEEEEEECCSSCEEEEEEETTTTEEEEEETTSEEEE
T ss_pred -CEEEEEECCCCCEEEECCCCCCCEEEEECCCCEEEE
T ss_conf -289994047884489626788860899878976999
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=95.51 E-value=0.033 Score=25.28 Aligned_cols=35 Identities=17% Similarity=0.152 Sum_probs=27.6
Q ss_pred EECCCCEEEEEECCCCEEEEECCCCCCCEECCCCC
Q ss_conf 93199999999299919998259999720003479
Q 002801 801 LSVWDGYVATGSETNEVFVYHKAFPMPALSFNFNH 835 (879)
Q Consensus 801 ~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~~ 835 (879)
.+..+..+.+|+.|+.++.+|..+++.+-++..+.
T Consensus 484 lstagglVF~G~~dg~l~A~Da~TGe~LW~~~~~~ 518 (573)
T d1kb0a2 484 LTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (573)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred EEECCCEEEEECCCCEEEEEECCCCCEEEEEECCC
T ss_conf 79869989997799919999999886857998989
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=95.19 E-value=0.043 Score=24.64 Aligned_cols=82 Identities=13% Similarity=0.039 Sum_probs=45.6
Q ss_pred CEEEEEECCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCE-EEEEEEC
Q ss_conf 919999857996006998157887899997499889999769909999569996455687607971878867-9999931
Q 002801 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFVDATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNVK-NFVGLSV 803 (879)
Q Consensus 725 ~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v-~~v~~sp 803 (879)
+.+.-||+.+++. +..............-..+.+++.|+.|+.++.+|..++ +.+.++.-..... .-+.|..
T Consensus 457 G~l~AiD~~tGk~-~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TG------e~LW~~~~~~~~~~~P~ty~~ 529 (573)
T d1kb0a2 457 GRLLAWDPVAQKA-AWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG------EKLWEAPTGTGVVAAPSTYMV 529 (573)
T ss_dssp EEEEEEETTTTEE-EEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC------CEEEEEECSSCCCSCCEEEEE
T ss_pred CCEEEECCCCCCE-EEEECCCCCCCCCEEEECCCEEEEECCCCEEEEEECCCC------CEEEEEECCCCCCCCCEEEEE
T ss_conf 6178757877866-705168898877607986998999779991999999988------685799898994516779998
Q ss_pred CCC-EEEEEEC
Q ss_conf 999-9999929
Q 002801 804 WDG-YVATGSE 813 (879)
Q Consensus 804 ~~~-~lasgs~ 813 (879)
+|+ ||+..+.
T Consensus 530 ~GkQYv~v~~G 540 (573)
T d1kb0a2 530 DGRQYVSVAVG 540 (573)
T ss_dssp TTEEEEEEEEC
T ss_pred CCEEEEEEEEC
T ss_conf 99999999937
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.07 E-value=0.046 Score=24.44 Aligned_cols=205 Identities=12% Similarity=0.001 Sum_probs=73.7
Q ss_pred CCEEEEEECCCCCEEEEE-ECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEEEEEC
Q ss_conf 988999993899999999-5899299995486447676411341772358981389981789996999607982999986
Q 002801 569 NLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVWDV 647 (879)
Q Consensus 569 ~~V~si~fspdg~~lat~-~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~iwd~ 647 (879)
..+.+++|++..+.+.-. ..++.|.-.+++...... ............+..+++....++...+-...+.|.+.++
T Consensus 30 ~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~~~~---~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~ 106 (266)
T d1ijqa1 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS---SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (266)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCEEEEEEEECCCEEEEEECCCCEEEEEEECCCCCCC---CEEEEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEEEC
T ss_conf 8559999980899999999979979999935788876---1489984899985468986426528999548999985764
Q ss_pred CCCEEEEEECCCCCCEEEEEEECCCCCEEEEEE-CCCCEEEEECCCCCEEEEEEC-CCCEEEEEEECCCCCEEEEEECCC
Q ss_conf 887288981247874999998039999999994-999499996999914889953-996699996289997999996799
Q 002801 648 SRSQVLTEMREHERRVWSIDFSSADPTLLASGS-DDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGSADH 725 (879)
Q Consensus 648 ~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs-~Dg~V~iwD~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs~D~ 725 (879)
........+.........+...|..+.++.+-. ..+.|.-.++........... -...+.+++++..++++.+-...+
T Consensus 107 ~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~ 186 (266)
T d1ijqa1 107 KGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (266)
T ss_dssp TSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCEEEECCCCCCEECCCCCCCCEEEEEEEECCCCEEEEECCCCC
T ss_conf 89537888727998833699980039488712699730268636888344120045320169986133569999528967
Q ss_pred EEEEEECCCCCEEEEEECCC--CCCEEEEEECCCCEEEEEECCCCEEEEECCCC
Q ss_conf 19999857996006998157--88789999749988999976990999956999
Q 002801 726 RIYYYDLRNSKIPLCTLIGH--NKTVSYVKFVDATTLVSASTDNTLKLWDLSMC 777 (879)
Q Consensus 726 ~I~iwDl~~~~~~~~~~~~h--~~~V~~i~fs~~~~l~sgs~D~~i~iwd~~~~ 777 (879)
.|...++..... ....... -.....+....+.++.+-..++.|...+..++
T Consensus 187 ~I~~~~~dG~~~-~~~~~~~~~~~~p~~lav~~~~ly~td~~~~~I~~~~~~~g 239 (266)
T d1ijqa1 187 SISSIDVNGGNR-KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTG 239 (266)
T ss_dssp EEEEEETTSCSC-EEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEECCCCCE-EEEEECCCCCCCCEEEEEECCEEEEEECCCCEEEEEECCCC
T ss_conf 999998999977-99993898556647999989999999899996999999899
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=94.59 E-value=0.062 Score=23.70 Aligned_cols=31 Identities=10% Similarity=-0.065 Sum_probs=17.2
Q ss_pred CCCCEEEEEECCCCEEEEECCCCCCCEECCC
Q ss_conf 1999999992999199982599997200034
Q 002801 803 VWDGYVATGSETNEVFVYHKAFPMPALSFNF 833 (879)
Q Consensus 803 p~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~ 833 (879)
..+..+..|+.|+.++.+|..+++.+-++..
T Consensus 482 TagglVF~G~~Dg~l~A~Da~TGe~LW~~~~ 512 (596)
T d1w6sa_ 482 TAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (596)
T ss_dssp ETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ECCCEEEEECCCCEEEEEECCCCCEEEEEEC
T ss_conf 6699799978999599999999848369989
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=94.46 E-value=0.066 Score=23.51 Aligned_cols=80 Identities=15% Similarity=0.024 Sum_probs=41.8
Q ss_pred CEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCC-CEEEEEEE
Q ss_conf 9199998579960069981578878999974-998899997699099995699964556876079718788-67999993
Q 002801 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTN-VKNFVGLS 802 (879)
Q Consensus 725 ~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~-~v~~v~~s 802 (879)
+.+.-||+.+++........ .++..-..+ .+.+++.|+.|+.++.+|..++ +.+.++.-... .-.-+.+.
T Consensus 453 G~l~A~D~~TG~~~W~~~~~--~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TG------e~LW~~~~~~~~~a~P~tY~ 524 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTG------DLLWKFKIPSGAIGYPMTYT 524 (596)
T ss_dssp EEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTC------CEEEEEECSSCCCSCCEEEE
T ss_pred CEEEEEECCCCCEECCCCCC--CCCCCCEEEECCCEEEEECCCCEEEEEECCCC------CEEEEEECCCCCCCCCEEEE
T ss_conf 53899807888562332788--88744146866997999789995999999998------48369989999540776899
Q ss_pred CCCC-EEEEEE
Q ss_conf 1999-999992
Q 002801 803 VWDG-YVATGS 812 (879)
Q Consensus 803 p~~~-~lasgs 812 (879)
.+|+ ||+...
T Consensus 525 ~dGkQYvav~~ 535 (596)
T d1w6sa_ 525 HKGTQYVAIYY 535 (596)
T ss_dssp ETTEEEEEEEE
T ss_pred ECCEEEEEEEE
T ss_conf 89999999993
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.99 E-value=0.023 Score=26.21 Aligned_cols=28 Identities=7% Similarity=0.058 Sum_probs=12.0
Q ss_pred CCCCCCCCCCCEEECCCCCEEEEECCCC
Q ss_conf 7110367886234244787245306655
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASC 129 (879)
Q Consensus 102 givH~DlkP~Nill~~~~~vk~~dfg~~ 129 (879)
|+||+|+.|.|++++.....-++||+-+
T Consensus 184 giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 184 GVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp EEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred CCCCCCCCHHHHHCCCCCCEEEECCCCC
T ss_conf 0333786365640204541267422212
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.32 E-value=0.11 Score=22.23 Aligned_cols=61 Identities=13% Similarity=0.001 Sum_probs=35.4
Q ss_pred CCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCEECCCC
Q ss_conf 90999956999645568760797187886799999319999999929991999825999972000347
Q 002801 767 NTLKLWDLSMCTSRVIDTPLHSFTGHTNVKNFVGLSVWDGYVATGSETNEVFVYHKAFPMPALSFNFN 834 (879)
Q Consensus 767 ~~i~iwd~~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~lasgs~Dg~v~iw~~~~~~~~~~~~~~ 834 (879)
+.|.-+|+.+++ .+-.+..+ .+...-..+..+..+..|+.|+.++.+|..+++.+-+++.+
T Consensus 466 G~l~AiD~~TG~------i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~~~ 526 (582)
T d1flga_ 466 GSLRAMDPVSGK------VVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp EEEEEECTTTCC------EEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CEEEEECCCCCC------EEEECCCC-CCCCCCEEEECCCEEEEECCCCEEEEEECCCCCEEEEEECC
T ss_conf 759998078995------87326779-99745016976986999679996999999998686798899
|
| >d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: YWTD domain family: YWTD domain domain: Low density lipoprotein (LDL) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.94 E-value=0.12 Score=21.88 Aligned_cols=232 Identities=7% Similarity=-0.050 Sum_probs=130.5
Q ss_pred EEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEE-CCCCEEEEECCCCE----EEEEEC
Q ss_conf 9999589929999548644767641134177235898138998178999699960-79829999868872----889812
Q 002801 583 FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQVWDVSRSQ----VLTEMR 657 (879)
Q Consensus 583 lat~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~-~dg~V~iwd~~t~~----~~~~~~ 657 (879)
|+.+.. ..|+-.++++... . .+ ......+..+.|+.. .+.|+-++ ..+.|.-.++.... ....+.
T Consensus 4 Ll~s~~-~~I~~~~l~~~~~--~----~~--~~~~~~~~~id~d~~-~~~lYw~D~~~~~I~~~~l~~~~~~~~~~~~~~ 73 (266)
T d1ijqa1 4 LFFTNR-HEVRKMTLDRSEY--T----SL--IPNLRNVVALDTEVA-SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 73 (266)
T ss_dssp EEEECB-SSEEEEETTSCCC--E----EE--ECSCSSEEEEEEETT-TTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred EEEECC-CEEEEEECCCCCC--E----EE--ECCCCCEEEEEEEEC-CCEEEEEECCCCEEEEEEECCCCCCCCEEEEEE
T ss_conf 999787-7189998999852--6----64--179985599999808-999999999799799999357888761489984
Q ss_pred CCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEEEEC-CCCEEEEEEECCCCCEEEEEE-CCCEEEEEECCCC
Q ss_conf 47874999998039999999994999499996999914889953-996699996289997999996-7991999985799
Q 002801 658 EHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGTIKT-KANVCCVQFPLDSGRSLAFGS-ADHRIYYYDLRNS 735 (879)
Q Consensus 658 ~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~~~~-~~~v~~v~~~p~~~~~l~tgs-~D~~I~iwDl~~~ 735 (879)
..-..+..+++.+..+++.++-...+.|.+.++........+.. ......++++|..+.++++.. ..+.|...++...
T Consensus 74 ~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~~~~g~~~~~~~~~~~~~P~~l~vd~~~g~ly~~~~~~~~~I~r~~~dGs 153 (266)
T d1ijqa1 74 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 153 (266)
T ss_dssp SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCCCCCCEEEEEECCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCEEEECCCCC
T ss_conf 89998546898642652899954899998576489537888727998833699980039488712699730268636888
Q ss_pred CEEEEEECCCCCCEEEEEEC-CC-CEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECC--CCCEEEEEEECCCCEEEEE
Q ss_conf 60069981578878999974-99-88999976990999956999645568760797187--8867999993199999999
Q 002801 736 KIPLCTLIGHNKTVSYVKFV-DA-TTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGH--TNVKNFVGLSVWDGYVATG 811 (879)
Q Consensus 736 ~~~~~~~~~h~~~V~~i~fs-~~-~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h--~~~v~~v~~sp~~~~lasg 811 (879)
.. .......-...+.+.+. .+ .+..+-...+.|...++.... ........ ......+++. .+..+.+-
T Consensus 154 ~~-~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~------~~~~~~~~~~~~~p~~lav~-~~~ly~td 225 (266)
T d1ijqa1 154 DI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN------RKTILEDEKRLAHPFSLAVF-EDKVFWTD 225 (266)
T ss_dssp CE-EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS------CEEEEECTTTTSSEEEEEEE-TTEEEEEE
T ss_pred CE-ECCCCCCCCEEEEEEEECCCCEEEEECCCCCEEEEEECCCCC------EEEEEECCCCCCCCEEEEEE-CCEEEEEE
T ss_conf 34-412004532016998613356999952896799999899997------79999389855664799998-99999998
Q ss_pred ECCCCEEEEECCCCCCCEECC
Q ss_conf 299919998259999720003
Q 002801 812 SETNEVFVYHKAFPMPALSFN 832 (879)
Q Consensus 812 s~Dg~v~iw~~~~~~~~~~~~ 832 (879)
..++.|+..++..+.....+.
T Consensus 226 ~~~~~I~~~~~~~g~~~~~~~ 246 (266)
T d1ijqa1 226 IINEAIFSANRLTGSDVNLLA 246 (266)
T ss_dssp TTTTEEEEEETTTCCCCEEEE
T ss_pred CCCCEEEEEECCCCCCEEEEE
T ss_conf 999969999998996159977
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=92.58 E-value=0.14 Score=21.59 Aligned_cols=83 Identities=8% Similarity=0.069 Sum_probs=44.8
Q ss_pred CEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCC-EEEEEEE
Q ss_conf 9199998579960069981578878999974-9988999976990999956999645568760797187886-7999993
Q 002801 725 HRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVSASTDNTLKLWDLSMCTSRVIDTPLHSFTGHTNV-KNFVGLS 802 (879)
Q Consensus 725 ~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~~~~~~~h~~~-v~~v~~s 802 (879)
+.+..||+.+++. +..+... .+...-... .+.+++.|+.|+.++.+|..++ +.+.++.-.... -.-+.+.
T Consensus 438 G~l~A~D~~tGk~-~W~~~~~-~~~~gg~l~TagglVF~G~~dg~l~A~Da~tG------e~LW~~~l~~~~~~~P~ty~ 509 (560)
T d1kv9a2 438 GALLAWDPVKQKA-AWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKG------EALWQFEAQSGIVAAPMTFE 509 (560)
T ss_dssp EEEEEEETTTTEE-EEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTC------CEEEEEECSSCCCSCCEEEE
T ss_pred CCEEEEECCCCEE-EEECCCC-CCCCCCEEEECCCEEEEECCCCCEEEEECCCC------CEEEEEECCCCCCCCCEEEE
T ss_conf 6468870778837-3102578-88877405987998999778981999999998------58279989999551677999
Q ss_pred CCCC-EEEEEECCC
Q ss_conf 1999-999992999
Q 002801 803 VWDG-YVATGSETN 815 (879)
Q Consensus 803 p~~~-~lasgs~Dg 815 (879)
.+|+ ||+..+..+
T Consensus 510 ~dGkqyv~v~aG~g 523 (560)
T d1kv9a2 510 LAGRQYVAIMAGWG 523 (560)
T ss_dssp ETTEEEEEEEECCC
T ss_pred ECCEEEEEEEECCC
T ss_conf 89999999991778
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=91.58 E-value=0.14 Score=21.52 Aligned_cols=28 Identities=4% Similarity=0.030 Sum_probs=20.7
Q ss_pred CCCCCCCCCCCCEEECCCCCEEEEECCCCC
Q ss_conf 371103678862342447872453066556
Q 002801 101 QGIVVHNVRPSCFVMSSFNHVSFIESASCS 130 (879)
Q Consensus 101 ~givH~DlkP~Nill~~~~~vk~~dfg~~~ 130 (879)
.++||+|+.|.|||++. + ..++||.-|.
T Consensus 192 ~~liHgDlh~~NvL~~~-~-~~~IDFdd~~ 219 (325)
T d1zyla1 192 VLRLHGDCHAGNILWRD-G-PMFVDLDDAR 219 (325)
T ss_dssp CEECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred CEEECCCCCCCCEEEEC-C-CEEEECHHCC
T ss_conf 12024788804287838-9-3588652014
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=90.38 E-value=0.2 Score=20.64 Aligned_cols=27 Identities=7% Similarity=0.183 Sum_probs=15.9
Q ss_pred CCCCCCCCCCCEEECCCCCEEEEECCCC
Q ss_conf 7110367886234244787245306655
Q 002801 102 GIVVHNVRPSCFVMSSFNHVSFIESASC 129 (879)
Q Consensus 102 givH~DlkP~Nill~~~~~vk~~dfg~~ 129 (879)
.++|+|+.|.|||++.. .++++|+-.+
T Consensus 224 ~LiHGDl~~gNIlv~~~-~~~vID~E~a 250 (392)
T d2pula1 224 TLIHGDLHTGSIFASEH-ETKVIDPEFA 250 (392)
T ss_dssp EEECSCCCGGGEEECSS-CEEECCCTTC
T ss_pred CEECCCCCCCCEEECCC-CEEEECHHHC
T ss_conf 00335776784667599-3089522652
|
| >d1xipa_ b.69.14.1 (A:) Nucleoporin NUP159 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nucleoporin domain family: Nucleoporin domain domain: Nucleoporin NUP159 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.47 E-value=0.28 Score=19.76 Aligned_cols=181 Identities=11% Similarity=0.045 Sum_probs=96.1
Q ss_pred CCEEEEEECCCCCEEEEEECCCCEEEEECCCCCC-----CCCCCCCCEEEECCCCCEEEEEEECCCCCEEEEEECCCCEE
Q ss_conf 9889999938999999995899299995486447-----67641134177235898138998178999699960798299
Q 002801 569 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-----ENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 643 (879)
Q Consensus 569 ~~V~si~fspdg~~lat~~~dg~I~iwd~~~~~~-----~~~~~~~~~~~~~~~~~I~~i~~~~~~~~~l~s~~~dg~V~ 643 (879)
...+-++.++...++++|+.+ .++|........ .......+.. .-..|..++|+. +.++... ++.+.
T Consensus 37 ~~~~LLAVsn~~GLl~aa~~~-~l~V~~t~~l~~~~~~~~~~~~~~~~~---~ip~v~~vafs~---d~l~v~~-~~~l~ 108 (381)
T d1xipa_ 37 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK---EIPDVIFVCFHG---DQVLVST-RNALY 108 (381)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE---ECTTEEEEEEET---TEEEEEE-SSEEE
T ss_pred CCCCEEEEECCCCEEEEECCC-EEEEEEHHHHHHHHHCCCCCCCCEECC---CCCCEEEEEEEC---CEEEEEE-CCCEE
T ss_conf 444268995777889998899-779999899787865567888623416---899868998618---9899995-89789
Q ss_pred EEECCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCEEEEECCCCCEEEE------EECCCCEEEEEEECCCCCE
Q ss_conf 9986887288981247874999998039999999994999499996999914889------9539966999962899979
Q 002801 644 VWDVSRSQVLTEMREHERRVWSIDFSSADPTLLASGSDDGSVKLWSINQGVSIGT------IKTKANVCCVQFPLDSGRS 717 (879)
Q Consensus 644 iwd~~t~~~~~~~~~h~~~V~si~fsp~~~~~lasgs~Dg~V~iwD~~~~~~i~~------~~~~~~v~~v~~~p~~~~~ 717 (879)
.++...-........-..++..+.++| ..++....++.+.++++..++.... +...+.+.|++|++. +..
T Consensus 109 ~~~~~~l~~~~~~~~~~~~~~~~~~~p---~~~~l~~~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~~~v~ws~k-gkq 184 (381)
T d1xipa_ 109 SLDLEELSEFRTVTSFEKPVFQLKNVN---NTLVILNSVNDLSALDLRTKSTKQLAQNVTSFDVTNSQLAVLLKDR-SFQ 184 (381)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEESEEEEEECSSEEEEEETTS-CEE
T ss_pred EEEEECCCCCCCCCCCCCCCCCEECCC---CEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEEECC-CEE
T ss_conf 998510014544655455611102188---6069996589778999415864444477523873389269999689-689
Q ss_pred EEEEECCCEEEEEECCCCCEEEEEECCCCCCEEEEEEC-CCCEEEE
Q ss_conf 99996799199998579960069981578878999974-9988999
Q 002801 718 LAFGSADHRIYYYDLRNSKIPLCTLIGHNKTVSYVKFV-DATTLVS 762 (879)
Q Consensus 718 l~tgs~D~~I~iwDl~~~~~~~~~~~~h~~~V~~i~fs-~~~~l~s 762 (879)
++++..+..-.--++..... +.........|.+|.|. +..+++.
T Consensus 185 ~v~~~g~~~q~k~~i~~~~~-~~~p~~~~~~v~sI~WL~~~~F~vv 229 (381)
T d1xipa_ 185 SFAWRNGEMEKQFEFSLPSE-LEELPVEEYSPLSVTILSPQDFLAV 229 (381)
T ss_dssp EEEEETTEEEEEEEECCCHH-HHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEECCCCEEECCCCCCCCC-CCCCCCCCCCEEEEEEECCCEEEEE
T ss_conf 99818982036567788201-5788677861668999517569999
|
| >d1h6la_ b.68.3.1 (A:) Thermostable phytase (3-phytase) {Bacillus amyloliquefaciens [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Thermostable phytase (3-phytase) family: Thermostable phytase (3-phytase) domain: Thermostable phytase (3-phytase) species: Bacillus amyloliquefaciens [TaxId: 1390]
Probab=89.09 E-value=0.3 Score=19.60 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=13.5
Q ss_pred EEEECCCCEEEEEEECCCCCEEEEEECCCEEEEEE
Q ss_conf 89953996699996289997999996799199998
Q 002801 697 GTIKTKANVCCVQFPLDSGRSLAFGSADHRIYYYD 731 (879)
Q Consensus 697 ~~~~~~~~v~~v~~~p~~~~~l~tgs~D~~I~iwD 731 (879)
+++.....+..+.++.. ...|+.+-.+.-|+.++
T Consensus 174 r~f~~~~q~EGCVvDde-~~~LyisEE~~Giw~~~ 207 (353)
T d1h6la_ 174 RAFKMNSQTEGMAADDE-YGSLYIAEEDEAIWKFS 207 (353)
T ss_dssp EEEECSSCEEEEEEETT-TTEEEEEETTTEEEEEE
T ss_pred ECCCCCCCCCEEEEECC-CCCEEEECCCCCEEEEE
T ss_conf 03588886216998178-89499954755238888
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=88.01 E-value=0.32 Score=19.46 Aligned_cols=37 Identities=14% Similarity=-0.077 Sum_probs=20.5
Q ss_pred EEEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 2888760885334530699998785688999999999998521037
Q 002801 57 FVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 102 (879)
Q Consensus 57 ~~v~e~~~g~sL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lHs~g 102 (879)
++|+|+++|.+|... ....-.+..+++..|.-+|...
T Consensus 117 g~I~efi~g~~l~~~---------d~~~~~~~~~iA~~La~lH~~~ 153 (395)
T d1nw1a_ 117 GRLEEYIPSRPLSCH---------EISLAHMSTKIAKRVAKVHQLE 153 (395)
T ss_dssp EEEECCCCEEECCTT---------GGGSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEECCCCCCHH---------HCCCHHHHHHHHHHHHHHHHCC
T ss_conf 569997345548833---------3146555599999999985033
|
| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Kelch motif family: Kelch motif domain: Kelch-like ECH-associated protein 1, KEAP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.84 E-value=0.47 Score=18.45 Aligned_cols=23 Identities=13% Similarity=0.005 Sum_probs=12.7
Q ss_pred CCCCEEEEEECCC-----CEEEEECCCC
Q ss_conf 1999999992999-----1999825999
Q 002801 803 VWDGYVATGSETN-----EVFVYHKAFP 825 (879)
Q Consensus 803 p~~~~lasgs~Dg-----~v~iw~~~~~ 825 (879)
.+++.++.|+.++ .+.+||+...
T Consensus 241 ~~~~l~v~GG~~~~~~~~~v~~yd~~~~ 268 (288)
T d1zgka1 241 HQGRIYVLGGYDGHTFLDSVECYDPDTD 268 (288)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ECCEEEEEECCCCCEECCEEEEEECCCC
T ss_conf 9999999956799954563999979999
|