Citrus Sinensis ID: 002812
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 877 | 2.2.26 [Sep-21-2011] | |||||||
| Q11011 | 920 | Puromycin-sensitive amino | yes | no | 0.962 | 0.917 | 0.446 | 0.0 | |
| P55786 | 919 | Puromycin-sensitive amino | yes | no | 0.954 | 0.910 | 0.449 | 0.0 | |
| P37898 | 856 | Alanine/arginine aminopep | yes | no | 0.941 | 0.964 | 0.352 | 1e-144 | |
| P32454 | 952 | Aminopeptidase 2, mitocho | no | no | 0.935 | 0.861 | 0.357 | 1e-143 | |
| Q9USX1 | 882 | Aminopeptidase 1 OS=Schiz | yes | no | 0.948 | 0.943 | 0.349 | 1e-142 | |
| Q59KZ1 | 924 | Aminopeptidase 2 OS=Candi | N/A | no | 0.935 | 0.887 | 0.349 | 1e-139 | |
| Q95334 | 942 | Glutamyl aminopeptidase O | no | no | 0.945 | 0.880 | 0.354 | 1e-138 | |
| Q07075 | 957 | Glutamyl aminopeptidase O | no | no | 0.947 | 0.868 | 0.350 | 1e-138 | |
| Q32LQ0 | 956 | Glutamyl aminopeptidase O | no | no | 0.948 | 0.870 | 0.352 | 1e-136 | |
| P50123 | 945 | Glutamyl aminopeptidase O | no | no | 0.936 | 0.868 | 0.340 | 1e-135 |
| >sp|Q11011|PSA_MOUSE Puromycin-sensitive aminopeptidase OS=Mus musculus GN=Npepps PE=1 SV=2 | Back alignment and function desciption |
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Score = 711 bits (1834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/882 (44%), Positives = 526/882 (59%), Gaps = 38/882 (4%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
M E + RLP P Y + L PDL F G + V T IV+N AD+ I
Sbjct: 46 MPEKRPFERLPAEVSPINYSLCLKPDLLDFTFEGKLEAAAQVRQATNQIVMNCADIDI-- 103
Query: 61 RSVSFTNKVSSKQALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFY 120
++ + + + T DE + L F TL TG G L I F G LNDKMKGFY
Sbjct: 104 --ITASYAPEGDEEIHATGFNYQNEDEKVTLSFPSTLQTGTGTLKIDFVGELNDKMKGFY 161
Query: 121 RSSYELN-GEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVID 179
RS Y GE + AVTQFE DARR FPCWDEPA KATF I+L VP + VALSNM VID
Sbjct: 162 RSRYTTPAGEVRYAAVTQFEATDARRAFPCWDEPAIKATFDISLVVPKDRVALSNMNVID 221
Query: 180 EKV---DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKF 236
K D N+ V + +P+MSTYLVA V+G +D+VE + DG+ VRVY VGKA QGKF
Sbjct: 222 RKPYPDDENLVEVKFARTPVMSTYLVAFVVGEYDFVETRSKDGVCVRVYTPVGKAEQGKF 281
Query: 237 ALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAA 296
AL VA KTL YK+YF VPY LPK+D+IAI DFAAGAMEN+GLVTYRETALL D ++S +
Sbjct: 282 ALEVAAKTLPFYKDYFNVPYPLPKIDLIAIADFAAGAMENWGLVTYRETALLIDPKNSCS 341
Query: 297 ANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFL 356
+++Q VA VV HELAHQWFGNLVTMEWWTHLWLNEGFA+W+ YL D FPE+ IWTQF+
Sbjct: 342 SSRQWVALVVGHELAHQWFGNLVTMEWWTHLWLNEGFASWIEYLCVDHCFPEYDIWTQFV 401
Query: 357 D-ECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRS 415
+ T LD L SHPIEV V H E+DEIFDAISY KGASVIRML +Y+G + F++
Sbjct: 402 SADYTRAQELDALDNSHPIEVSVGHPSEVDEIFDAISYSKGASVIRMLHDYIGDKDFKKG 461
Query: 416 LASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEK----LE 471
+ Y+ K+ NA TEDLW +LE SG+P+ +MN+WTKQ G+P+I V+ ++ + L+
Sbjct: 462 MNMYLTKFQQKNAATEDLWESLESASGKPIAAVMNTWTKQMGFPLIYVEAEQVEDDRVLK 521
Query: 472 LEQSQFLSSGSPGD---GQWIVPITLCCG-SYDVCKNFLLYNKSDSFDIKELLGCSISKE 527
L Q +F +SG G QW+VPIT+ + K +L +K + + K
Sbjct: 522 LSQKKFCASGPYGGEDCPQWMVPITISTSEDPNQAKLKILMDKPEM--------SVVLKN 573
Query: 528 GDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQT 587
W+KLN+ GFYR +Y + L I L DR G+ +D F+L A +
Sbjct: 574 VKPDQWVKLNLGTVGFYRTQYSSAMLESLLPGIRDLSLPPVDRLGLQNDLFSLARAGIIS 633
Query: 588 LTSLLTLMASYSEETEYTVLSNLITISYKIGRIAA-DARPELLDYLKQFFISLFQNSAEK 646
+L +M ++ E YTV S+L S +G ++ + + + +++F +F E+
Sbjct: 634 TVEVLKVMEAFVNEPNYTVWSDL---SCNLGILSTLLSHTDFYEEIQEFVKDVFSPIGER 690
Query: 647 LGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAA 706
LGWD KPGE HLDALLRG + L GHK TL EA +RF + + +L D+R
Sbjct: 691 LGWDPKPGEGHLDALLRGLVLGKLGKAGHKATLEEARRRFKEHVEGKQ--ILSADLRSPV 748
Query: 707 YVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSEV 766
Y+ V++ D + + +L+++++ D+ +EK RI L + ++ +VL F LS EV
Sbjct: 749 YLTVLKH---GDGATLDIMLKLHKQADMQEEKNRIERVLGATLSPELIQKVLTFALSEEV 805
Query: 767 RSQDAVY---GLA-VSIEGRETAWKWLKDNWDHISKTWGSGFLITRFISSIVSPFASYEK 822
R QD V G+A S GR+ AWK++KDNW+ + + GFLI+R I V FA +
Sbjct: 806 RPQDTVSVIGGVAGGSKHGRKAAWKFIKDNWEELHNRYQGGFLISRLIKLSVEGFAVDKM 865
Query: 823 VREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGH 864
EV+ FF S P RT++Q E + +NA W++ + H
Sbjct: 866 AGEVKAFFESHPAPSAERTIQQCCENILLNAAWLKRDADSIH 907
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Aminopeptidase with broad substrate specificity for several peptides. Involved in proteolytic events essential for cell growth and viability. May act as regulator of neuropeptide activity. Plays a role in the antigen-processing pathway for MHC class I molecules. Involved in the N-terminal trimming of cytotoxic T-cell epitope precursors. Digests the poly-Q peptides found in many cellular proteins. Mus musculus (taxid: 10090) EC: 3EC: .EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 4 |
| >sp|P55786|PSA_HUMAN Puromycin-sensitive aminopeptidase OS=Homo sapiens GN=NPEPPS PE=1 SV=2 | Back alignment and function description |
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| >sp|P37898|AAP1_YEAST Alanine/arginine aminopeptidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=AAP1 PE=1 SV=2 | Back alignment and function description |
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| >sp|P32454|APE2_YEAST Aminopeptidase 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=APE2 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q9USX1|APE1_SCHPO Aminopeptidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ape1 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q59KZ1|APE2_CANAL Aminopeptidase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=APE2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q95334|AMPE_PIG Glutamyl aminopeptidase OS=Sus scrofa GN=ENPEP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q07075|AMPE_HUMAN Glutamyl aminopeptidase OS=Homo sapiens GN=ENPEP PE=1 SV=3 | Back alignment and function description |
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| >sp|Q32LQ0|AMPE_BOVIN Glutamyl aminopeptidase OS=Bos taurus GN=ENPEP PE=2 SV=1 | Back alignment and function description |
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| >sp|P50123|AMPE_RAT Glutamyl aminopeptidase OS=Rattus norvegicus GN=Enpep PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 877 | ||||||
| 343887278 | 911 | aminopeptidase [Citrus unshiu] | 0.949 | 0.914 | 0.849 | 0.0 | |
| 225429582 | 880 | PREDICTED: puromycin-sensitive aminopept | 0.998 | 0.995 | 0.820 | 0.0 | |
| 147772895 | 880 | hypothetical protein VITISV_012143 [Viti | 0.998 | 0.995 | 0.818 | 0.0 | |
| 255550101 | 870 | puromycin-sensitive aminopeptidase, puta | 0.992 | 1.0 | 0.792 | 0.0 | |
| 356507019 | 873 | PREDICTED: puromycin-sensitive aminopept | 0.995 | 1.0 | 0.778 | 0.0 | |
| 356514669 | 873 | PREDICTED: puromycin-sensitive aminopept | 0.995 | 1.0 | 0.773 | 0.0 | |
| 357465783 | 876 | Puromycin-sensitive aminopeptidase [Medi | 0.998 | 1.0 | 0.769 | 0.0 | |
| 297798638 | 879 | hypothetical protein ARALYDRAFT_491378 [ | 0.994 | 0.992 | 0.766 | 0.0 | |
| 22329112 | 879 | aminopeptidase M1 [Arabidopsis thaliana] | 0.994 | 0.992 | 0.767 | 0.0 | |
| 449486688 | 886 | PREDICTED: LOW QUALITY PROTEIN: puromyci | 0.998 | 0.988 | 0.756 | 0.0 |
| >gi|343887278|dbj|BAK61824.1| aminopeptidase [Citrus unshiu] | Back alignment and taxonomy information |
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Score = 1575 bits (4077), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 811/955 (84%), Positives = 816/955 (85%), Gaps = 122/955 (12%)
Query: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN
Sbjct: 1 MEEFKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINN 60
Query: 61 RSVSFTNKVSSKQALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFY 120
RSVSFTNK SSK ALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFY
Sbjct: 61 RSVSFTNKASSK-ALEPTKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFY 119
Query: 121 RSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDE 180
RSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDE
Sbjct: 120 RSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDE 179
Query: 181 KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDG----------IKVRVYCQVGK 230
KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDG IKVRVYCQVGK
Sbjct: 180 KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGTVTISIDSHGIKVRVYCQVGK 239
Query: 231 ANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYD 290
ANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYD
Sbjct: 240 ANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYD 299
Query: 291 DQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWK 350
DQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWK
Sbjct: 300 DQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWK 359
Query: 351 IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAE 410
IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAE
Sbjct: 360 IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAE 419
Query: 411 CFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKL 470
CFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKV+EEKL
Sbjct: 420 CFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVREEKL 479
Query: 471 ELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDN 530
ELEQ LGCSISKEGDN
Sbjct: 480 ELEQEL-------------------------------------------LGCSISKEGDN 496
Query: 531 GGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTS 590
GGWIKLNVNQTGFYRVKYDKDLAARLGYAIE KQLSETDRFGILDDHFALCMARQQTLTS
Sbjct: 497 GGWIKLNVNQTGFYRVKYDKDLAARLGYAIEKKQLSETDRFGILDDHFALCMARQQTLTS 556
Query: 591 LLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE----- 645
LLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAE
Sbjct: 557 LLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAELFICR 616
Query: 646 KLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKA 705
KLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKA
Sbjct: 617 KLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKA 676
Query: 706 AYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE 765
AYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE
Sbjct: 677 AYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE 736
Query: 766 VRSQDAVYGLAVSIEGRETAWKWLKD--------NWDHI--------------------- 796
VRSQDAVYGLAVSIEGRETAWKWLK N+D I
Sbjct: 737 VRSQDAVYGLAVSIEGRETAWKWLKASGVLSKEVNFDPIPSSINGRISSITGTTSQRPGV 796
Query: 797 --------------------SKTWGSGFLITRFISSIVSP--------------FASYEK 822
S+ S F + +S V P FASYEK
Sbjct: 797 LVFLSHALSAQLSHRFVVYTSQIMCSVFQLLHMCTSNVFPLIPFLFLSAVWHAQFASYEK 856
Query: 823 VREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY 877
VREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY
Sbjct: 857 VREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYRKY 911
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Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225429582|ref|XP_002280239.1| PREDICTED: puromycin-sensitive aminopeptidase [Vitis vinifera] gi|296081675|emb|CBI20680.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147772895|emb|CAN73668.1| hypothetical protein VITISV_012143 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255550101|ref|XP_002516101.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] gi|223544587|gb|EEF46103.1| puromycin-sensitive aminopeptidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356507019|ref|XP_003522269.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356514669|ref|XP_003526026.1| PREDICTED: puromycin-sensitive aminopeptidase-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357465783|ref|XP_003603176.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] gi|355492224|gb|AES73427.1| Puromycin-sensitive aminopeptidase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297798638|ref|XP_002867203.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] gi|297313039|gb|EFH43462.1| hypothetical protein ARALYDRAFT_491378 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|22329112|ref|NP_195035.2| aminopeptidase M1 [Arabidopsis thaliana] gi|17473511|gb|AAL38379.1| AT4g33090/F4I10_20 [Arabidopsis thaliana] gi|24209879|gb|AAN41401.1| aminopeptidase M [Arabidopsis thaliana] gi|29028734|gb|AAO64746.1| At4g33090/F4I10_20 [Arabidopsis thaliana] gi|110742477|dbj|BAE99157.1| aminopeptidase like protein [Arabidopsis thaliana] gi|332660772|gb|AEE86172.1| aminopeptidase M1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449486688|ref|XP_004157369.1| PREDICTED: LOW QUALITY PROTEIN: puromycin-sensitive aminopeptidase-like [Cucumis sativus] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q974N6 | APE2_SULTO | 3, ., 4, ., 1, 1, ., - | 0.3400 | 0.8620 | 0.9679 | yes | no |
| Q9USX1 | APE1_SCHPO | 3, ., 4, ., 1, 1, ., - | 0.3492 | 0.9486 | 0.9433 | yes | no |
| Q11011 | PSA_MOUSE | 3, ., 4, ., 1, 1, ., 1, 4 | 0.4467 | 0.9623 | 0.9173 | yes | no |
| A2RI32 | AMPN_LACLM | 3, ., 4, ., 1, 1, ., 2 | 0.3244 | 0.9156 | 0.9491 | yes | no |
| O93655 | TRF3_THEAC | 3, ., 4, ., 1, 1, ., - | 0.3217 | 0.8540 | 0.9602 | yes | no |
| P37898 | AAP1_YEAST | 3, ., 4, ., 1, 1, ., - | 0.3526 | 0.9418 | 0.9649 | yes | no |
| Q10730 | AMPN_LACHE | 3, ., 4, ., 1, 1, ., 2 | 0.3187 | 0.9304 | 0.9668 | yes | no |
| Q9CIQ1 | AMPN_LACLA | 3, ., 4, ., 1, 1, ., 2 | 0.3153 | 0.9350 | 0.9692 | yes | no |
| P55786 | PSA_HUMAN | 3, ., 4, ., 1, 1, ., 1, 4 | 0.4491 | 0.9543 | 0.9107 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.3.2 | LOW CONFIDENCE prediction! |
| 3rd Layer | 3.4.11 | 0.921 |
| 3rd Layer | 3.3.2.6 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00032225001 | SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (877 aa) | |||||||||
(Vitis vinifera) | |||||||||||
 | GSVIVG00010470001 | • | • | 0.427 | |||||||
 | GSVIVG00014791001 | • | • | 0.411 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 877 | |||
| cd09601 | 446 | cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N f | 0.0 | |
| pfam01433 | 390 | pfam01433, Peptidase_M1, Peptidase family M1 | 1e-171 | |
| COG0308 | 859 | COG0308, PepN, Aminopeptidase N [Amino acid transp | 1e-156 | |
| cd09602 | 438 | cd09602, M1_APN_3, Peptidase M1 family containing | 1e-93 | |
| TIGR02412 | 831 | TIGR02412, pepN_strep_liv, aminopeptidase N, Strep | 6e-74 | |
| cd09603 | 415 | cd09603, M1_APN_4, Peptidase M1 family Aminopeptid | 2e-69 | |
| cd09595 | 407 | cd09595, M1, Peptidase M1 family contains aminopep | 7e-69 | |
| pfam11838 | 323 | pfam11838, DUF3358, Domain of unknown function (DU | 3e-60 | |
| TIGR02414 | 863 | TIGR02414, pepN_proteo, aminopeptidase N, Escheric | 6e-37 | |
| cd09600 | 861 | cd09600, M1_APN_1, Peptidase M1 family containing | 2e-33 | |
| cd09604 | 435 | cd09604, M1_APN_5, Peptidase M1 family containing | 9e-30 | |
| cd09599 | 442 | cd09599, M1_LTA4H, Peptidase M1 family contains le | 2e-29 | |
| TIGR02411 | 602 | TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrola | 6e-27 | |
| pfam13485 | 128 | pfam13485, Peptidase_MA_2, Peptidase MA superfamil | 1e-19 | |
| cd09839 | 507 | cd09839, M1_TAF2, TATA binding protein (TBP) assoc | 6e-17 | |
| PRK14015 | 875 | PRK14015, pepN, aminopeptidase N; Provisional | 2e-16 | |
| cd09594 | 125 | cd09594, GluZincin, Peptidase Gluzincin family (th | 4e-05 |
| >gnl|CDD|189008 cd09601, M1_APN_2, Peptidase M1 Aminopeptidase N family incudes tricorn interacting factor F3, Endoplasmic reticulum aminopeptidase 1 (ERAP1), Aminopeptidase Q (APQ) | Back alignment and domain information |
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Score = 702 bits (1814), Expect = 0.0
Identities = 250/447 (55%), Positives = 308/447 (68%), Gaps = 7/447 (1%)
Query: 18 RYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKQALEP 77
YD+ LTPDL + F GSV I ++V T IVL+A DLTI S + T + L
Sbjct: 2 HYDLTLTPDLDNFTFSGSVTITLEVTEPTNEIVLHAKDLTIT--SATVTVGGGNVDILVT 59
Query: 78 TKVELVEADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVT 136
++ L+ TL G L I F G LND ++GFYRSSY + GE + +A T
Sbjct: 60 ITYSEENEFLVITLDEPLTLAGGNYTLTIEFTGELNDDLRGFYRSSYTDNGGETRYLAAT 119
Query: 137 QFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEKV-DGNMKTVSYQESP 195
QFEP DARR FPC+DEPA KATF IT+ P+ ALSNMPV E+V KT ++ +P
Sbjct: 120 QFEPTDARRAFPCFDEPAFKATFTITITHPAGYTALSNMPVESEEVLGDGWKTTEFETTP 179
Query: 196 IMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVP 255
MSTYLVA V+G FDYVE T +G+ VRVY + GK QG +AL VA K LE +++YF +P
Sbjct: 180 PMSTYLVAFVVGDFDYVEGTTKNGVPVRVYARPGKIEQGDYALEVAPKILEFFEDYFGIP 239
Query: 256 YSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 315
Y LPKLD++AIPDFAAGAMEN+GL+TYRETALLYD + S+A+NKQRVATVVAHELAHQWF
Sbjct: 240 YPLPKLDLVAIPDFAAGAMENWGLITYRETALLYDPKTSSASNKQRVATVVAHELAHQWF 299
Query: 316 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQF-LDECTEGLRLDGLAESHPI 374
GNLVTM+WW LWLNEGFAT++ YL D L PEW +W QF LD+ L LD LA SHPI
Sbjct: 300 GNLVTMKWWDDLWLNEGFATYMEYLGVDHLEPEWNMWDQFVLDDLQSALALDSLASSHPI 359
Query: 375 EVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLW 434
V V EI EIFDAISY KGASV+RML+++LG E F++ L +Y+KK+A NA T+DLW
Sbjct: 360 SVPVETPDEISEIFDAISYSKGASVLRMLEHFLGEEVFRKGLRNYLKKHAYGNATTDDLW 419
Query: 435 AALEE--GSGEPVNKLMNSWTKQKGYP 459
AL E G+ V ++M++WT Q GYP
Sbjct: 420 EALSEASKLGKDVKEIMDTWTLQPGYP 446
|
This M1 peptidase family includes eukaryotic and bacterial members: aminopeptidase N (APN), aminopeptidase Q (APQ, laeverin), endoplasmic reticulum aminopeptidase 1 (ERAP1) as well as tricorn interacting factor F3. Aminopeptidase N (APN; CD13; Alanyl aminopeptidase; EC 3.4.11.2), a Type II integral membrane protease, consists of a small N-terminal cytoplasmic domain, a single transmembrane domain and a large extracellular ectodomain that contains the active site. It preferentially cleaves neutral amino acids from the N-terminus of oligopeptides and is present in a variety of human tissues and cell types (leukocyte, fibroblast, endothelial and epithelial cells). APN expression is dysregulated in inflammatory diseases such as chronic pain, rheumatoid arthritis, multiple sclerosis, systemic sclerosis, systemic lupus erythematosus, polymyositis/dermatomyosytis and pulmonary sarcoidosis, and is enhanced in tumor cells such as melanoma, renal, prostate, pancreas, colon, gastric and thyroid cancers. It is considered a marker of differentiation since it is predominantly expressed on stem cells and on cells of the granulocytic and monocytic lineages at distinct stages of differentiation. Thus, APN inhibition may lead to the development of anti-cancer and anti-inflammatory drugs. ERAP1 also known as endoplasmic reticulum aminopeptidase associated with antigen processing (ERAAP), adipocyte derived leucine aminopeptidase (A-LAP) or aminopeptidase regulating tumor necrosis factor receptor I (THFRI) shedding (ARTS-1), associates with the closely related ER aminopeptidase ERAP2, for the final trimming of peptides within the ER for presentation by MHC class I molecules. ERAP1 is associated with ankylosing spondylitis (AS), an inflammatory arthritis that predominantly affects the spine. ERAP1 also aids in the shedding of membrane-bound cytokine receptors. The tricorn interacting factor F3, together with factors F1 and F2, degrades the tricorn protease products, producing free amino acids, thus completing the proteasomal degradation pathway. F3 is homologous to F2, but not F1, and shows a strong preference for glutamate in the P1' position. APQ, also known as laeverin, is specifically expressed in human embryo-derived extravillous trophoblasts (EVTs) that invade the uterus during early placentation. It cleaves the N-terminal amino acid of various peptides such as angiotensin III, endokinin C, and kisspeptin-10, all expressed in the placenta in large quantities. APN is a receptor for coronaviruses, although the virus receptor interaction site seems to be distinct from the enzymatic site and aminopeptidase activity is not necessary for viral infection. APNs are also putative Cry toxin receptors. Cry1 proteins are pore-forming toxins that bind to the midgut epithelial cell membrane of susceptible insect larvae, causing extensive damage. Several different toxins, including Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ba, Cry1Ca and Cry1Fa, have been shown to bind to APNs; however, a direct role of APN in cytotoxicity has been yet to be firmly established. Length = 446 |
| >gnl|CDD|216501 pfam01433, Peptidase_M1, Peptidase family M1 | Back alignment and domain information |
|---|
| >gnl|CDD|223385 COG0308, PepN, Aminopeptidase N [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|189009 cd09602, M1_APN_3, Peptidase M1 family containing Aminopeptidase N | Back alignment and domain information |
|---|
| >gnl|CDD|233857 TIGR02412, pepN_strep_liv, aminopeptidase N, Streptomyces lividans type | Back alignment and domain information |
|---|
| >gnl|CDD|189010 cd09603, M1_APN_4, Peptidase M1 family Aminopeptidase N | Back alignment and domain information |
|---|
| >gnl|CDD|189002 cd09595, M1, Peptidase M1 family contains aminopeptidase N and leukotriene A4 hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|221257 pfam11838, DUF3358, Domain of unknown function (DUF3358) | Back alignment and domain information |
|---|
| >gnl|CDD|233858 TIGR02414, pepN_proteo, aminopeptidase N, Escherichia coli type | Back alignment and domain information |
|---|
| >gnl|CDD|189007 cd09600, M1_APN_1, Peptidase M1 family containing Aminopeptidase N | Back alignment and domain information |
|---|
| >gnl|CDD|189011 cd09604, M1_APN_5, Peptidase M1 family containing bacterial Aminopeptidase N | Back alignment and domain information |
|---|
| >gnl|CDD|189006 cd09599, M1_LTA4H, Peptidase M1 family contains leukotriene A4 hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|233856 TIGR02411, leuko_A4_hydro, leukotriene A-4 hydrolase/aminopeptidase | Back alignment and domain information |
|---|
| >gnl|CDD|222169 pfam13485, Peptidase_MA_2, Peptidase MA superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|189018 cd09839, M1_TAF2, TATA binding protein (TBP) associated factor 2 | Back alignment and domain information |
|---|
| >gnl|CDD|237585 PRK14015, pepN, aminopeptidase N; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|189001 cd09594, GluZincin, Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4, M13, M32 and M36 (fungalysins) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 877 | |||
| KOG1046 | 882 | consensus Puromycin-sensitive aminopeptidase and r | 100.0 | |
| TIGR02412 | 831 | pepN_strep_liv aminopeptidase N, Streptomyces livi | 100.0 | |
| COG0308 | 859 | PepN Aminopeptidase N [Amino acid transport and me | 100.0 | |
| TIGR02414 | 863 | pepN_proteo aminopeptidase N, Escherichia coli typ | 100.0 | |
| PRK14015 | 875 | pepN aminopeptidase N; Provisional | 100.0 | |
| TIGR02411 | 601 | leuko_A4_hydro leukotriene A-4 hydrolase/aminopept | 100.0 | |
| PF01433 | 390 | Peptidase_M1: Peptidase family M1 This is family M | 100.0 | |
| KOG1047 | 613 | consensus Bifunctional leukotriene A4 hydrolase/am | 100.0 | |
| PF11838 | 324 | ERAP1_C: ERAP1-like C-terminal domain; InterPro: I | 100.0 | |
| KOG1932 | 1180 | consensus TATA binding protein associated factor [ | 100.0 | |
| COG3975 | 558 | Predicted protease with the C-terminal PDZ domain | 99.19 | |
| PF13485 | 128 | Peptidase_MA_2: Peptidase MA superfamily | 99.15 | |
| PF10460 | 366 | Peptidase_M30: Peptidase M30; InterPro: IPR019501 | 97.52 | |
| PF05299 | 122 | Peptidase_M61: M61 glycyl aminopeptidase; InterPro | 96.85 | |
| PF11940 | 367 | DUF3458: Domain of unknown function (DUF3458); Int | 96.24 | |
| PF07607 | 128 | DUF1570: Protein of unknown function (DUF1570); In | 95.7 | |
| PF04450 | 205 | BSP: Peptidase of plants and bacteria; InterPro: I | 95.4 | |
| PF10026 | 195 | DUF2268: Predicted Zn-dependent protease (DUF2268) | 92.63 | |
| smart00638 | 574 | LPD_N Lipoprotein N-terminal Domain. | 90.67 | |
| PRK04860 | 160 | hypothetical protein; Provisional | 87.05 | |
| PF01863 | 205 | DUF45: Protein of unknown function DUF45; InterPro | 82.05 | |
| PF10023 | 337 | DUF2265: Predicted aminopeptidase (DUF2265); Inter | 80.44 |
| >KOG1046 consensus Puromycin-sensitive aminopeptidase and related aminopeptidases [Amino acid transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-151 Score=1359.30 Aligned_cols=844 Identities=47% Similarity=0.777 Sum_probs=777.6
Q ss_pred CCCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCcCCcccccceeEEEec
Q 002812 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKQALEPTKVELVE 84 (877)
Q Consensus 5 ~~~~rLp~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~ 84 (877)
...+|||.+++|+||+|+|.+++....|.|++.|.+.+.++|+.|+||+.++.|.++.+....+... ........+.
T Consensus 26 ~~~~rLP~~v~P~~Y~l~l~~~l~~~~f~G~v~I~l~v~~~t~~i~Lh~~~l~i~~~~~~~~~~~~~---~~~~~~~~~~ 102 (882)
T KOG1046|consen 26 PNEYRLPTNVVPLHYDLTLKPDLEEFTFTGSVKISLEVSEATRFIVLHAKDLKITSASLVSRPSSGS---VQLEVSVEEK 102 (882)
T ss_pred cccccCCCCCCCceeEEEEecCCcCCcceeEEEEEEEEecccCEEEEEhhhccceeEEEEecCCCCc---cccccccccc
Confidence 3678999999999999999999999999999999999999999999999999999999965322111 0111100111
Q ss_pred C-CeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeecc-CCeeeeeeeeccCCCCCCceeeccCCCCCceEEEE
Q 002812 85 A-DEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 161 (877)
Q Consensus 85 ~-~~~l~i~l~~~l~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~l 161 (877)
. .+.+.+.+++++.+| .|+|+|.|.|.+++.+.|||+++|.+ ++.++++++|||||++||++|||||||++||+|+|
T Consensus 103 ~~~~~l~~~~~~~l~~~~~y~L~i~f~g~l~~~~~G~y~s~y~~~~~~~~~~~~Tqfept~AR~~FPCfDeP~~KAtF~I 182 (882)
T KOG1046|consen 103 EQEETLVFPLNETLLAGSSYTLTIEFTGKLNDSSEGFYRSSYTDSEGSEKSIAATQFEPTDARRAFPCFDEPAFKATFTI 182 (882)
T ss_pred ccceEEEEEcccccccCCeEEEEEEEeEeecCCcceeeeecccCCCCceEEEEEeccCccchhhcCCCCCcccccCceEE
Confidence 1 167888999999999 89999999999999999999999987 46669999999999999999999999999999999
Q ss_pred EEEeCCCCeEEcCCcccce-eecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCCccchHHHHHHH
Q 002812 162 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 240 (877)
Q Consensus 162 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 240 (877)
+|.||++++|+||||+..+ ..++++++++|++||+||||++||+||+|++.+..+.+|+++++|++|+...+++++++.
T Consensus 183 tl~hp~~~~aLSNm~v~~~~~~~~~~~~~~F~~Tp~MstYLvAf~V~~f~~~e~~~~~~v~vrv~a~p~~~~~~~~al~~ 262 (882)
T KOG1046|consen 183 TLVHPKGYTALSNMPVIKEEPVDDGWKTTTFEKTPKMSTYLVAFAVGDFVYVETITKSGVPVRVYARPEKINQGQFALEV 262 (882)
T ss_pred EEEecCCceEeecCcccccccccCCeeEEEEEecCCCchhhheeeeeccccceeecCCCceEEEEeChHHhhHHHHHHHH
Confidence 9999999999999999876 445559999999999999999999999999999888889999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccc
Q 002812 241 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 320 (877)
Q Consensus 241 ~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 320 (877)
+.++|++|+++||+|||+||+|+|++|+|..|||||||||+|+|..+|+++..++..++++++.+||||+|||||||+||
T Consensus 263 ~~~~L~~~e~~f~i~yPLpK~D~iavPdf~~GAMENwGLvtyre~~lL~~~~~ss~~~k~~va~vIaHElAHQWFGNLVT 342 (882)
T KOG1046|consen 263 ATKVLEFYEDYFGIPYPLPKLDLVAVPDFSAGAMENWGLVTYRETALLYDPQTSSSSNKQRVAEVIAHELAHQWFGNLVT 342 (882)
T ss_pred HHHHHHHHHHHhCCCCCCccccEEecCCccccchhcCcceeeeehhhccCCCcCcHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcCchhhHhhHHHHHHHHHHHhhhCcchhhHHHHHHHHH-HHhhhcccCCCCceeeecCCcchhhccccccccchhhHH
Q 002812 321 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASV 399 (877)
Q Consensus 321 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~v 399 (877)
|+||+|+|||||||+|+++++++..+|+|..+++++.+.. .++..|++.++||+..++.++.+|.+.||.++|.||++|
T Consensus 343 m~wW~dLWLnEGfAt~~~~~~v~~~~p~~~~~~~~~~~~l~~~l~~D~l~~shpi~~~v~~~~ei~e~fd~i~Y~KGasv 422 (882)
T KOG1046|consen 343 MKWWNDLWLNEGFATYVEYLAVDHLFPEWDIWEQFLLENLERVLSLDALASSHPISVPVESPSEIDEIFDEISYQKGASV 422 (882)
T ss_pred HhhhhhhhhcccHHHHHHHHhhccCCcchhhHHHHHHHHHHHHhhhhcccccCCeeeecCCcchhhhhhhhhhhhHHHHH
Confidence 9999999999999999999999999999999999887777 579999999999999999999999999999999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhhcCCCcceEEEEEeCCEEEEEEEeecc
Q 002812 400 IRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLS 479 (877)
Q Consensus 400 l~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~~~~~~l~Q~rf~~ 479 (877)
||||+.++|++.|++||+.||.+|+|+|++++|||++|+...+.|++++|+.|+.|+|||+|+|.+++++++++|+||..
T Consensus 423 lRML~~~lGe~~F~~gi~~yL~~~~y~na~~~DLw~~l~~~~~~~v~~~M~~Wt~Q~G~Pvv~V~~~~~~~~l~Q~rf~~ 502 (882)
T KOG1046|consen 423 LRMLESLLGEEVFRKGLRSYLKKHQYSNAKTEDLWDALEEGSGLDVSELMDTWTKQMGYPVVTVERNGDSLTLTQERFLS 502 (882)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHhccCCCCchhHHHHHhccCCCCHHHHHhhhhcCCCCceEEEEecCCEEEEehhhhcc
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999988
Q ss_pred CCC--CCCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEecCCceeEEEEEcCHHHHHHHH
Q 002812 480 SGS--PGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLG 557 (877)
Q Consensus 480 ~~~--~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~ 557 (877)
... .....|+||++|.+...+.....++..++..+.++. .+ +||++|.++.|||||+||+++|+.|+
T Consensus 503 ~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~--~wi~~N~~~~g~yRV~Yd~~~w~~l~ 571 (882)
T KOG1046|consen 503 DPDPSEDNYLWWIPLTYTTSGSGSVPKFWLSSKSTTIKLPE---------SD--QWIKVNLEQTGYYRVNYDDENWALLI 571 (882)
T ss_pred CCCccccCcccceeEEEEcCCCCccceeeecCCCcceecCC---------CC--eEEEEeCCcceEEEEEeCHHHHHHHH
Confidence 754 334599999999887655445677877777777754 33 69999999999999999999999999
Q ss_pred HHHHc-cCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHH
Q 002812 558 YAIEM-KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFF 636 (877)
Q Consensus 558 ~~l~~-~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 636 (877)
.+|.. ..+++.+|++||+|+|+|+++|+++++.+|+++.||.+|++|.||..++..|..+.. +.. .+.+..++.|+
T Consensus 572 ~~l~~~~~~~~~~Ra~li~D~~~la~~~~~~~~~~l~l~~~l~~e~~~~p~~~~~~~l~~~~~-~~~--~~~~~~~~~~~ 648 (882)
T KOG1046|consen 572 EQLKNHESLSVIDRAQLINDAFALARAGRLPYSIALNLISYLKNETDYVPWSAAIRSLYKLHS-LED--TEIYSKFKEFV 648 (882)
T ss_pred HHHhhcCccCHhHHHHHHHHHHHHHhcCCCchHHHHHHHHHHhcccccchHHHHHHHHHHHhh-ccc--chHHHHHHHHH
Confidence 99976 789999999999999999999999999999999999999999999999999998888 444 45889999999
Q ss_pred HHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhheeeeeeccc
Q 002812 637 ISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSA 716 (877)
Q Consensus 637 ~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~ 716 (877)
++++.++++++||.....++ ....+|..++..||..|+++|.+.|.++|.+|+.. ++++|+++|.+|||++++ +
T Consensus 649 ~~l~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~a~~~~~~~~~~~a~~~f~~~~~~--~~~ip~~lr~~vy~~~~~---~ 722 (882)
T KOG1046|consen 649 KKLILPIFEKLGWSDGADSS-LDNMLRVSVLSFACRFGHEECLKKAVELFRQWLAG--TNPIPPDLREVVYCTAVQ---F 722 (882)
T ss_pred HHHHHHHHHHhcCCccccch-hHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhc--CCCCChhhhhhhhhHHHH---h
Confidence 99999999999998855443 78899999999999999999999999999999987 778999999988887655 8
Q ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhcc-CcCCcccceeeee-eccc--cHHHHHHHHHHH
Q 002812 717 SDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLS-SEVRSQDAVYGLA-VSIE--GRETAWKWLKDN 792 (877)
Q Consensus 717 g~~~~~~~l~~~y~~~~~~~ek~~~l~aL~cs~d~~ll~~~L~~~l~-~~i~~qd~~~~~~-v~~~--g~~~~~~fl~~n 792 (877)
|+++.|++++++|+++....||..++.||+|+++++.++++|++.++ ..++.||...++. ++.| |..+||+|+..|
T Consensus 723 g~~~~w~~~~~~y~~~~~~~e~~~~l~al~~~~~~~~l~~~l~~~~~~~~v~~qd~~~~~~~~~~~~~g~~~a~~~~~~n 802 (882)
T KOG1046|consen 723 GTEEDWEQLLELYKKETTAAEKRKLLNALSCSKDPWLLQRLLDLAFDAENVRDQDVLTLLQGISGNPRGVELAWKFLQDN 802 (882)
T ss_pred cCHhHHHHHHHHHhccccHHHHHHHHHHhccCccHHHHHHHHHHhcccccccchhHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999888 4699999999988 7776 999999999999
Q ss_pred HHHHHHHhCCCcchHHHHHHhhccCCCHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHh
Q 002812 793 WDHISKTWGSGFLITRFISSIVSPFASYEKVREVEEFFSSRCKPYIARTLRQSIERVQINAKWVESIRNEGHLAEAVKEL 872 (877)
Q Consensus 793 ~~~i~~~~~~~~~l~~~v~~~~~~~~t~~~~~~~~~f~~~~~~~~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~ 872 (877)
|+.+.++|++.+.+..++..++..+.++.+++++++||...+.....+++++++|.++.|+.|.+++.+. +.+||.+.
T Consensus 803 ~~~l~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~le~~~~ni~W~~~~~~~--l~~~l~~~ 880 (882)
T KOG1046|consen 803 WKELLNRYGNNFELSRLISFITEPFATEEKLDEVEKFFADIPKTGAERALQQALETVKANIQWVERNEEN--LTQWLLEA 880 (882)
T ss_pred HHHHHHhcCCcHHHHHHHHHHHhccCCHHHHHHHHHHHhcCCcchhhHHHHHHHHHHHhhhhHHHhhHHH--HHHHHHHh
Confidence 9999999996688999999999999999999999999999876666899999999999999999999988 99999875
Q ss_pred h
Q 002812 873 A 873 (877)
Q Consensus 873 ~ 873 (877)
.
T Consensus 881 ~ 881 (882)
T KOG1046|consen 881 L 881 (882)
T ss_pred c
Confidence 3
|
|
| >TIGR02412 pepN_strep_liv aminopeptidase N, Streptomyces lividans type | Back alignment and domain information |
|---|
| >COG0308 PepN Aminopeptidase N [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02414 pepN_proteo aminopeptidase N, Escherichia coli type | Back alignment and domain information |
|---|
| >PRK14015 pepN aminopeptidase N; Provisional | Back alignment and domain information |
|---|
| >TIGR02411 leuko_A4_hydro leukotriene A-4 hydrolase/aminopeptidase | Back alignment and domain information |
|---|
| >PF01433 Peptidase_M1: Peptidase family M1 This is family M1 in the peptidase classification | Back alignment and domain information |
|---|
| >KOG1047 consensus Bifunctional leukotriene A4 hydrolase/aminopeptidase LTA4H [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones; Defense mechanisms; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PF11838 ERAP1_C: ERAP1-like C-terminal domain; InterPro: IPR024571 This entry represents the uncharacterised C-terminal domain of zinc metallopeptidases belonging to MEROPS peptidase family M1 (aminopeptidase N, clan MA), with a single member characterised in Streptomyces lividans: aminopeptidase G [] | Back alignment and domain information |
|---|
| >KOG1932 consensus TATA binding protein associated factor [Transcription] | Back alignment and domain information |
|---|
| >COG3975 Predicted protease with the C-terminal PDZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF13485 Peptidase_MA_2: Peptidase MA superfamily | Back alignment and domain information |
|---|
| >PF10460 Peptidase_M30: Peptidase M30; InterPro: IPR019501 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF05299 Peptidase_M61: M61 glycyl aminopeptidase; InterPro: IPR007963 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF11940 DUF3458: Domain of unknown function (DUF3458); InterPro: IPR024601 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >PF07607 DUF1570: Protein of unknown function (DUF1570); InterPro: IPR011464 This entry represents hypothetical proteins confined to bacteria | Back alignment and domain information |
|---|
| >PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] | Back alignment and domain information |
|---|
| >PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function | Back alignment and domain information |
|---|
| >smart00638 LPD_N Lipoprotein N-terminal Domain | Back alignment and domain information |
|---|
| >PRK04860 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori | Back alignment and domain information |
|---|
| >PF10023 DUF2265: Predicted aminopeptidase (DUF2265); InterPro: IPR014553 This group represents a predicted aminopeptidase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 877 | ||||
| 3se6_A | 967 | Crystal Structure Of The Human Endoplasmic Reticulu | 1e-128 | ||
| 4e36_A | 967 | Crystal Structure Of The Human Endoplasmic Reticulu | 1e-128 | ||
| 4f5c_A | 959 | Crystal Structure Of The Spike Receptor Binding Dom | 1e-120 | ||
| 4fke_A | 909 | Crystal Structure Of Porcine Aminopeptidase-N Lengt | 1e-120 | ||
| 4h5h_A | 908 | Crystal Structure Of Porcine Aminopeptidase-N Compl | 1e-120 | ||
| 4hol_A | 908 | Crystal Structure Of Porcine Aminopeptidase-N Compl | 1e-119 | ||
| 3qnf_A | 954 | Crystal Structure Of The Open State Of Human Endopl | 1e-119 | ||
| 2yd0_A | 897 | Crystal Structure Of The Soluble Domain Of Human En | 1e-119 | ||
| 3mdj_A | 921 | Er Aminopeptidase, Erap1, Bound To The Zinc Aminope | 1e-119 | ||
| 4fyq_A | 903 | Human Aminopeptidase N (Cd13) Length = 903 | 1e-115 | ||
| 3q7j_A | 780 | Engineered Thermoplasma Acidophilum F3 Factor Mimic | 1e-105 | ||
| 1z1w_A | 780 | Crystal Structures Of The Tricorn Interacting Facor | 1e-105 | ||
| 3q43_A | 891 | X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin | 9e-31 | ||
| 3ebg_A | 889 | Structure Of The M1 Alanylaminopeptidase From Malar | 9e-31 | ||
| 3ebi_A | 890 | Structure Of The M1 Alanylaminopeptidase From Malar | 9e-31 | ||
| 3t8v_A | 895 | A Bestatin-Based Chemical Biology Strategy Reveals | 2e-30 | ||
| 3u9w_A | 608 | Structure Of Human Leukotriene A4 Hydrolase In Comp | 2e-24 | ||
| 1hs6_A | 611 | Structure Of Leukotriene A4 Hydrolase Complexed Wit | 2e-24 | ||
| 2r59_A | 616 | Leukotriene A4 Hydrolase Complexed With Inhibitor R | 2e-24 | ||
| 3cho_A | 610 | Crystal Structure Of Leukotriene A4 Hydrolase In Co | 2e-24 | ||
| 1sqm_A | 610 | Structure Of [r563a] Leukotriene A4 Hydrolase Lengt | 3e-24 | ||
| 1gw6_A | 610 | Structure Of Leukotriene A4 Hydrolase D375n Mutant | 3e-24 | ||
| 1h19_A | 611 | Structure Of [e271q] Leukotriene A4 Hydrolase Lengt | 5e-24 | ||
| 3b7s_A | 616 | [e296q]lta4h In Complex With Rsr Substrate Length = | 5e-24 | ||
| 2dq6_A | 870 | Crystal Structure Of Aminopeptidase N From Escheric | 5e-22 | ||
| 2hpo_A | 891 | Structure Of Aminopeptidase N From E. Coli Suggests | 5e-22 | ||
| 3puu_A | 891 | Crystal Structure Of Glu121gln Mutant Of E. Coli Am | 1e-21 | ||
| 2xq0_A | 632 | Structure Of Yeast Lta4 Hydrolase In Complex With B | 4e-19 | ||
| 2xpy_A | 632 | Structure Of Native Leukotriene A4 Hydrolase From S | 8e-19 | ||
| 3cia_A | 605 | Crystal Structure Of Cold-Aminopeptidase From Colwe | 6e-18 | ||
| 2gtq_A | 867 | Crystal Structure Of Aminopeptidase N From Human Pa | 1e-17 | ||
| 3rjo_A | 419 | Crystal Structure Of Erap1 Peptide Binding Domain L | 7e-16 |
| >pdb|3SE6|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Length = 967 | Back alignment and structure |
|
| >pdb|4E36|A Chain A, Crystal Structure Of The Human Endoplasmic Reticulum Aminopeptidase 2 Variant N392k Length = 967 | Back alignment and structure |
| >pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of A Porcine Respiratory Coronavirus In Complex With The Pig Aminopeptidase N Ectodomain Length = 959 | Back alignment and structure |
| >pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Length = 909 | Back alignment and structure |
| >pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Cleaved Poly-Alanine Length = 908 | Back alignment and structure |
| >pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed With Poly- Alanine Length = 908 | Back alignment and structure |
| >pdb|3QNF|A Chain A, Crystal Structure Of The Open State Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 954 | Back alignment and structure |
| >pdb|2YD0|A Chain A, Crystal Structure Of The Soluble Domain Of Human Endoplasmic Reticulum Aminopeptidase 1 Erap1 Length = 897 | Back alignment and structure |
| >pdb|3MDJ|A Chain A, Er Aminopeptidase, Erap1, Bound To The Zinc Aminopeptidase Inhibitor, Bestatin Length = 921 | Back alignment and structure |
| >pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13) Length = 903 | Back alignment and structure |
| >pdb|3Q7J|A Chain A, Engineered Thermoplasma Acidophilum F3 Factor Mimics Human Aminopeptidase N (Apn) As A Target For Anticancer Drug Development Length = 780 | Back alignment and structure |
| >pdb|1Z1W|A Chain A, Crystal Structures Of The Tricorn Interacting Facor F3 From Thermoplasma Acidophilum, A Zinc Aminopeptidase In Three Different Conformations Length = 780 | Back alignment and structure |
| >pdb|3Q43|A Chain A, X-Ray Crystal Structure Of Pfa-M1 Bound To Bestatin Derivative 15 Length = 891 | Back alignment and structure |
| >pdb|3EBG|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Length = 889 | Back alignment and structure |
| >pdb|3EBI|A Chain A, Structure Of The M1 Alanylaminopeptidase From Malaria Complexed With The Phosphinate Dipeptide Analog Length = 890 | Back alignment and structure |
| >pdb|3T8V|A Chain A, A Bestatin-Based Chemical Biology Strategy Reveals Distinct Roles For Malaria M1- And M17-Family Aminopeptidases Length = 895 | Back alignment and structure |
| >pdb|3U9W|A Chain A, Structure Of Human Leukotriene A4 Hydrolase In Complex With Inhibitor Sc57461a Length = 608 | Back alignment and structure |
| >pdb|1HS6|A Chain A, Structure Of Leukotriene A4 Hydrolase Complexed With Bestatin. Length = 611 | Back alignment and structure |
| >pdb|2R59|A Chain A, Leukotriene A4 Hydrolase Complexed With Inhibitor Rb3041 Length = 616 | Back alignment and structure |
| >pdb|3CHO|A Chain A, Crystal Structure Of Leukotriene A4 Hydrolase In Complex With 2-Amino-N-[4-(Phenylmethoxy)phenyl]-Acetamide Length = 610 | Back alignment and structure |
| >pdb|1SQM|A Chain A, Structure Of [r563a] Leukotriene A4 Hydrolase Length = 610 | Back alignment and structure |
| >pdb|1GW6|A Chain A, Structure Of Leukotriene A4 Hydrolase D375n Mutant Length = 610 | Back alignment and structure |
| >pdb|1H19|A Chain A, Structure Of [e271q] Leukotriene A4 Hydrolase Length = 611 | Back alignment and structure |
| >pdb|3B7S|A Chain A, [e296q]lta4h In Complex With Rsr Substrate Length = 616 | Back alignment and structure |
| >pdb|2DQ6|A Chain A, Crystal Structure Of Aminopeptidase N From Escherichia Coli Length = 870 | Back alignment and structure |
| >pdb|2HPO|A Chain A, Structure Of Aminopeptidase N From E. Coli Suggests A Compartmentalized, Gated Active Site Length = 891 | Back alignment and structure |
| >pdb|3PUU|A Chain A, Crystal Structure Of Glu121gln Mutant Of E. Coli Aminopeptidase N Length = 891 | Back alignment and structure |
| >pdb|2XQ0|A Chain A, Structure Of Yeast Lta4 Hydrolase In Complex With Bestatin Length = 632 | Back alignment and structure |
| >pdb|2XPY|A Chain A, Structure Of Native Leukotriene A4 Hydrolase From Saccharomyces Cerevisiae Length = 632 | Back alignment and structure |
| >pdb|3CIA|A Chain A, Crystal Structure Of Cold-Aminopeptidase From Colwellia Psychrerythraea Length = 605 | Back alignment and structure |
| >pdb|2GTQ|A Chain A, Crystal Structure Of Aminopeptidase N From Human Pathogen Neisseria Meningitidis Length = 867 | Back alignment and structure |
| >pdb|3RJO|A Chain A, Crystal Structure Of Erap1 Peptide Binding Domain Length = 419 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} Length = 967 | Back alignment and structure |
|---|
Score = 1017 bits (2631), Expect = 0.0
Identities = 291/911 (31%), Positives = 464/911 (50%), Gaps = 68/911 (7%)
Query: 9 RLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNK 68
RLP +P YD+ + P+LTS F S I+V V T+FI+L++ DL I N ++
Sbjct: 68 RLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEED 127
Query: 69 VSSKQALEPTKVELVEADEILVLEFAETLPTGM-GVLAIGFEGVLNDKMKGFYRSSYE-L 126
+ + KV A E + L E L + +A+ F+ L D +GFY+S+Y L
Sbjct: 128 SRYMKPGKELKVLSYPAHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTL 187
Query: 127 NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSNMPVIDEK-VDGN 185
GE + +AVT FEP AR FPC+DEP KA F I + S +ALSNMP + ++G
Sbjct: 188 GGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIKIRRESRHIALSNMPKVKTIELEGG 247
Query: 186 MKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTL 245
+ ++ + MSTYLVA ++ F + TS G+KV +Y K NQ +AL ++K L
Sbjct: 248 LLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQASLKLL 307
Query: 246 ELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATV 305
+ Y++YF + Y L KLD+IAIPDFA GAMEN+GL+TYRET+LL+D + S+A++K V V
Sbjct: 308 DFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRV 367
Query: 306 VAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRL 365
+AHELAHQWFGNLVTMEWW +WLNEGFA ++ +A ++ +PE + FL+ C E +
Sbjct: 368 IAHELAHQWFGNLVTMEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITK 427
Query: 366 DGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYAC 425
D L S PI +I E+FD +SY KGA ++ ML+++LG E FQ+ + Y+KK++
Sbjct: 428 DSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILNMLKDFLGEEKFQKGIIQYLKKFSY 487
Query: 426 SNAKTEDLWAALEE---------------------------GSGEPVNKLMNSWTKQKGY 458
NAK +DLW++L G V ++M +WT QKG
Sbjct: 488 RNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGI 547
Query: 459 PVISVKVKEEKLELEQSQFLSSGSPGDGQ---------WIVPITLCCGSYDVCKNFLLYN 509
P++ VK L L+Q +FL D + W +P+T S +V +L +
Sbjct: 548 PLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKS 607
Query: 510 KSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIE--MKQLSE 567
K+D+ D+ + W+K NV+ G+Y V Y+ +L + L
Sbjct: 608 KTDTLDLP-----------EKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRP 656
Query: 568 TDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLIT-ISYKIGRIAADARP 626
DR G++ D F L A + TL L + ET L ++ + +
Sbjct: 657 KDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETSSPALLEGLSYLESFYHMMDRRNIS 716
Query: 627 ELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRF 686
++ + LK++ + F+ ++ W S D +LR + L H + +A++ F
Sbjct: 717 DISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQKAAELF 774
Query: 687 HAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLA 746
++ +P D+ K Y Q +G+ LL Y + S E+ +IL +L+
Sbjct: 775 SQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALS 829
Query: 747 SCPDVNIVLEVLNFLLSSE-VRSQDAVY---GLAVSIEGRETAWKWLKDNWDHISKTWGS 802
+ +L+++ + + +++Q+ +A +G++ AW ++++NW H+ K +
Sbjct: 830 TSKHQEKLLKLIELGMEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDL 889
Query: 803 G-FLITRFISSIVSPFASYEKVREVEEFFSSR-CKPYIARTLRQSIERVQINAKWVESIR 860
G + I IS + F+S +K++EV+ FF S + + +E + N KW+E +
Sbjct: 890 GSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQGSHLDIFQTVLETITKNIKWLE--K 947
Query: 861 NEGHLAEAVKE 871
N L +
Sbjct: 948 NLPTLRTWLMV 958
|
| >1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* Length = 780 | Back alignment and structure |
|---|
| >2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* Length = 632 | Back alignment and structure |
|---|
| >3b7s_A Leukotriene A-4 hydrolase; transition state, analogue peptide, hydrolysis, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease; 1.47A {Homo sapiens} SCOP: a.118.1.7 b.98.1.1 d.92.1.13 PDB: 3b7t_A 3b7r_L* 2r59_A* 3b7u_X* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* 3fu5_A* ... Length = 616 | Back alignment and structure |
|---|
| >3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} Length = 605 | Back alignment and structure |
|---|
| >3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* Length = 889 | Back alignment and structure |
|---|
| >2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} Length = 867 | Back alignment and structure |
|---|
| >3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* Length = 891 | Back alignment and structure |
|---|
| >3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} Length = 419 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} Length = 597 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 877 | |||
| 3se6_A | 967 | Endoplasmic reticulum aminopeptidase 2; thermolysi | 100.0 | |
| 4fke_A | 909 | Aminopeptidase N; zinc aminopeptidase, hydrolase; | 100.0 | |
| 2xdt_A | 897 | Endoplasmic reticulum aminopeptidase 1; glycoprote | 100.0 | |
| 1z5h_A | 780 | Tricorn protease interacting factor F3; zinc amino | 100.0 | |
| 2gtq_A | 867 | Aminopeptidase N; alanine aminopeptidase, M1 famil | 100.0 | |
| 3b34_A | 891 | Aminopeptidase N; protease, hydrolase, thermolysin | 100.0 | |
| 3ebh_A | 889 | PFA-M1, M1 family aminopeptidase; hydrolase, metal | 100.0 | |
| 3cia_A | 605 | Cold-active aminopeptidase; psychrohilic, hydrolas | 100.0 | |
| 3u9w_A | 608 | Leukotriene A-4 hydrolase; hydrolase-hydrolase inh | 100.0 | |
| 2xq0_A | 632 | LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: B | 100.0 | |
| 3rjo_A | 419 | Endoplasmic reticulum aminopeptidase 1; ERAP1, hyd | 100.0 | |
| 4fgm_A | 597 | Aminopeptidase N family protein; structural genomi | 99.95 | |
| 2y3u_A | 785 | Collagenase, collagenase G; hydrolase, gluzincin, | 82.72 | |
| 1u4g_A | 301 | Elastase, pseudolysin; , inhibition, peptidase fam | 81.31 | |
| 1bqb_A | 301 | Protein (aureolysin); hydrolase, metalloproteinase | 81.16 |
| >3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-162 Score=1472.27 Aligned_cols=850 Identities=34% Similarity=0.599 Sum_probs=772.8
Q ss_pred CCCCcCCCCceeeEEEEEEEecCCCCeEEEEEEEEEEEECCCCEEEEEeCCceeeEEEEeeccCcCC-cccccceeEEEe
Q 002812 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS-KQALEPTKVELV 83 (877)
Q Consensus 5 ~~~~rLp~~~~p~~Y~l~l~~~~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~-~~~~~~~~~~~~ 83 (877)
-.++|||.+++|.||+|.|++++++.+|+|+|+|++++.++++.|+||+++|+|+++.+....+... ..........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 4579999999999999999999999999999999999999999999999999999999864321000 001112222333
Q ss_pred cCCeEEEEEeCCCcCCc-eEEEEEEEEeeecCCCcceEEeeecc-CCeeeeeeeeccCCCCCCceeeccCCCCCceEEEE
Q 002812 84 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 161 (877)
Q Consensus 84 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~l~~~~~G~y~~~y~~-~g~~~~~~~t~~~p~~Ar~~fPc~Dep~~ka~f~l 161 (877)
..+.+.|.++++|++| .|+|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678889999999999 99999999999999999999999976 78889999999999999999999999999999999
Q ss_pred EEEeCCCCeEEcCCcccce-eecCCeEEEEEEeCCCCcceEEEEEEeeeeeeecccCCCeEEEEEEcCCccchHHHHHHH
Q 002812 162 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 240 (877)
Q Consensus 162 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~m~~yl~a~~vg~f~~~~~~~~~g~~v~v~~~~~~~~~~~~~l~~ 240 (877)
+|++|++|+|+|||++.++ ...+++++++|+.+||||+|++||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345678999999999999999999999999988666779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCChhHHHHHHHHHHHHHHHHHHhcCccc
Q 002812 241 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 320 (877)
Q Consensus 241 ~~~~l~~~e~~fg~~yp~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt 320 (877)
+.+++++||++||+|||++|+|+|++|+|..||||||||++|+|..+++++..++...++.++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred cCcCchhhHhhHHHHHHHHHHHhhhCcchhhHHHHHHHHHHHhhhcccCCCCceeeecCCcchhhccccccccchhhHHH
Q 002812 321 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 400 (877)
Q Consensus 321 ~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~f~~i~Y~Kg~~vl 400 (877)
|+||+|+|||||||+|++++++++.+|+|.+...|+.+...++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999987777666567889999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc---------------------------cCCCHHHHHHHhh
Q 002812 401 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 453 (877)
Q Consensus 401 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------~~~~l~~~~~~W~ 453 (877)
|||+..||++.|+++|+.|+++|+|++++++|||++|+++ +|.||++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCcceEEEEEeCCEEEEEEEeeccCCCC---------CCCeeEEEEEEEECcccceeeEEeeccceEEEecccccccc
Q 002812 454 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 524 (877)
Q Consensus 454 ~~~g~P~l~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (877)
.|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+..++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999989999999999875432 23589999999987654445577776666666542
Q ss_pred cCCCCCCceEEecCCceeEEEEEcCHHHHHHHHHHHHc--cCCChhhHHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCC
Q 002812 525 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEM--KQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET 602 (877)
Q Consensus 525 ~~~~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~l~~--~~i~~~~Ra~li~D~~~la~~g~l~~~~~l~l~~~l~~E~ 602 (877)
.+ +||++|.++.||||||||+++|.+|+++|.. ..||+.||||||+|+|+||++|.++|+.+|++++||++|+
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 34 8999999999999999999999999999975 3699999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 002812 603 EYTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE 681 (877)
Q Consensus 603 ~~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~ 681 (877)
+|+||.++++.|..+.+++... .++.+..|++|+++++.|+++++||+ +++++.++++|..++.+||.+|+++|+++
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~ 769 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK 769 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999988632 24578899999999999999999998 46889999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCcchhhhhheeeeeecccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 002812 682 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 761 (877)
Q Consensus 682 a~~~f~~~~~~~~~~~i~~dlr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~~l~aL~cs~d~~ll~~~L~~~ 761 (877)
|+++|++|++++....||||+|.+|||++++ ++++|++||++|++++++.||..+|.||||++|+++|+++|+++
T Consensus 770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 844 (967)
T 3se6_A 770 AAELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG 844 (967)
T ss_dssp HHHHHHHHHHTTTCSCCCHHHHHHHHHHHTT-----SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccCChhhhhHhHhhhhc-----cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999998754446999999999998643 48899999999999999999999999999999999999999999
Q ss_pred ccCc-CCcccceeeee-eccc--cHHHHHHHHHHHHHHHHHHhCCC-cchHHHHHHhhccCCCHHHHHHHHHHhhcCCCc
Q 002812 762 LSSE-VRSQDAVYGLA-VSIE--GRETAWKWLKDNWDHISKTWGSG-FLITRFISSIVSPFASYEKVREVEEFFSSRCKP 836 (877)
Q Consensus 762 l~~~-i~~qd~~~~~~-v~~~--g~~~~~~fl~~n~~~i~~~~~~~-~~l~~~v~~~~~~~~t~~~~~~~~~f~~~~~~~ 836 (877)
++++ ||.||...++. ++.| |+.++|+|+++||+.|.++|+.+ +.++++|..+++.|+|+++++++++||+.++..
T Consensus 845 l~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~nw~~i~~~~~~~~~~~~~~i~~~~~~~~t~~~l~~~~~f~~~~~~~ 924 (967)
T 3se6_A 845 MEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRENWTHLLKKFDLGSYDIRMIISGTTAHFSSKDKLQEVKLFFESLEAQ 924 (967)
T ss_dssp HHCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHSCTTSHHHHHHHHTTTTTCCSHHHHHHHHHHHHHSCSS
T ss_pred hCcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHhccCCHHHHHHHHHHHHhCCcc
Confidence 9874 89999999998 8877 99999999999999999999854 689999999999999999999999999987654
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHhhcc
Q 002812 837 -YIARTLRQSIERVQINAKWVESIRNEGHLAEAVKELAYR 875 (877)
Q Consensus 837 -~~~~~~~~~le~i~~ni~W~~~~~~~~~i~~wl~~~~~~ 875 (877)
...+++++++|+|+.|++|++++.+. |.+||+.|++.
T Consensus 925 ~~~~~~~~q~le~i~~ni~W~~~~~~~--i~~wl~~~~~~ 962 (967)
T 3se6_A 925 GSHLDIFQTVLETITKNIKWLEKNLPT--LRTWLMVNTRH 962 (967)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHhcccc
Confidence 34689999999999999999999999 99999998753
|
| >4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A* | Back alignment and structure |
|---|
| >1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A* | Back alignment and structure |
|---|
| >2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis} | Back alignment and structure |
|---|
| >3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A* | Back alignment and structure |
|---|
| >3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A* | Back alignment and structure |
|---|
| >3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea} | Back alignment and structure |
|---|
| >3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ... | Back alignment and structure |
|---|
| >2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A* | Back alignment and structure |
|---|
| >3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR} | Back alignment and structure |
|---|
| >2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A* | Back alignment and structure |
|---|
| >1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A* | Back alignment and structure |
|---|
| >1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 877 | ||||
| d3b7sa3 | 252 | d.92.1.13 (A:209-460) Leukotriene A4 hydrolase cat | 2e-49 | |
| d3b7sa2 | 208 | b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-term | 3e-33 |
| >d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Score = 172 bits (437), Expect = 2e-49
Identities = 65/255 (25%), Positives = 110/255 (43%), Gaps = 19/255 (7%)
Query: 219 GIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENY 277
G + V+ + + + + + L++ ++ PY + D++ + P F G MEN
Sbjct: 7 GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENP 65
Query: 278 GLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWV 337
L T L A + ++ V+AH+++H W GNLVT + W H WLNEG ++
Sbjct: 66 CLTFVTPTLL---------AGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYL 116
Query: 338 SYLAADSLFPEWKIWTQFLDECTE-GLRLDGLAESHPIEVEVNHTGEID--EIFDAISYR 394
LF E L E + E+HP V +ID + ++ Y
Sbjct: 117 ERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYE 176
Query: 395 KGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----M 449
KG +++ L+ LG E F L +Y++K++ + T+D L + V+ L
Sbjct: 177 KGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDW 236
Query: 450 NSWTKQKGYPVISVK 464
N+W G P I
Sbjct: 237 NAWLYSPGLPPIKPN 251
|
| >d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 877 | |||
| d3b7sa3 | 252 | Leukotriene A4 hydrolase catalytic domain {Human ( | 100.0 | |
| d3b7sa2 | 208 | Leukotriene A4 hydrolase N-terminal domain {Human | 100.0 | |
| d1lsha1 | 336 | Lipovitellin-phosvitin complex, superhelical domai | 91.06 | |
| d1u4ga_ | 298 | Elastase {Pseudomonas aeruginosa [TaxId: 287]} | 87.32 | |
| d1bqba_ | 301 | Aureolysin {Staphylococcus aureus [TaxId: 1280]} | 81.56 |
| >d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b)
fold: Zincin-like
superfamily: Metalloproteases ("zincins"), catalytic domain
family: Leukotriene A4 hydrolase catalytic domain
domain: Leukotriene A4 hydrolase catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-49 Score=413.39 Aligned_cols=236 Identities=27% Similarity=0.459 Sum_probs=206.9
Q ss_pred CeEEEEEEcCCccchHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCChhH
Q 002812 219 GIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAA 297 (877)
Q Consensus 219 g~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~~yp~~kld~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~ 297 (877)
|++|+||++|+..++++++++.++++|++||++|| |||++|+|+|++ |++..|||||||++++++..++.+..
T Consensus 7 g~~vrv~~~p~~~~~~~~~l~~~~~~l~~~e~~~g-~YP~~k~d~v~~~~~~~~ggmE~~~l~~~~~~~~~~~~~----- 80 (252)
T d3b7sa3 7 GPRTLVWSEKEQVEKSAYEFSETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS----- 80 (252)
T ss_dssp ETTEEEEECGGGHHHHHHHTTTHHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST-----
T ss_pred CCceEEEEccchHHHHHHHHHHHHHHHHHHHHhCC-CCCchhcCEEEeCCCccccccccceeeeecchhccccch-----
Confidence 78999999999999999999999999999999998 999999999999 68889999999999999985543332
Q ss_pred HHHHHHHHHHHHHHHHHhcCccccCcCchhhHhhHHHHHHHHHHHhhhCcchhhHHHHHHHHH-HHhhhcccCCCCceee
Q 002812 298 NKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEV 376 (877)
Q Consensus 298 ~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGfa~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~p~~~ 376 (877)
+..+||||+|||||||+||++||+|+||+||||+|++.+++++.+|+............ .....|+....+|+..
T Consensus 81 ----~~~~iaHE~aHqWfG~~Vt~~~w~~~WL~EG~a~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (252)
T d3b7sa3 81 ----LSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTK 156 (252)
T ss_dssp ----TTHHHHHHHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGS
T ss_pred ----HHHHHHHHHHHHHHhhhceeccccchHhhccHHHHHHHHhhccccchhhhhhhhhhhhhhHHHHHhhhhccCCcce
Confidence 44689999999999999999999999999999999999999999987655444443333 3456677777888776
Q ss_pred ecCCcc--hhhccccccccchhhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHH----H
Q 002812 377 EVNHTG--EIDEIFDAISYRKGASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----M 449 (877)
Q Consensus 377 ~~~~~~--~~~~~f~~i~Y~Kg~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~----~ 449 (877)
++..+. +++..|+.++|.||++||+||+..|| ++.|+++||.|+++|++++++++||++++++++|.+++.+ |
T Consensus 157 ~~~~~~~~~~~~~f~~~~Y~Kga~vl~mL~~~iG~~~~f~~~lr~yl~~~~~~~~~~~df~~~l~~~~~~~~~~~~~~~f 236 (252)
T d3b7sa3 157 LVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDW 236 (252)
T ss_dssp SSCCCTTCCHHHHCSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHTTSCH
T ss_pred eeccccccchhhcccceeecchhHHHHHHHHHhccHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhccccchhhHhHH
Confidence 554433 34567999999999999999999999 6789999999999999999999999999999999999998 9
Q ss_pred HHhhcCCCcceEEEE
Q 002812 450 NSWTKQKGYPVISVK 464 (877)
Q Consensus 450 ~~W~~~~g~P~l~v~ 464 (877)
++|++++|||+|+|+
T Consensus 237 ~~W~~~~G~P~l~v~ 251 (252)
T d3b7sa3 237 NAWLYSPGLPPIKPN 251 (252)
T ss_dssp HHHHHCCSSCSSCCC
T ss_pred HHHhcCCCCCeeecc
Confidence 999999999999885
|
| >d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex, superhelical domain {Lamprey (Ichthyomyzon unicuspis) [TaxId: 30308]} | Back information, alignment and structure |
|---|
| >d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|