Citrus Sinensis ID: 002847
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | 2.2.26 [Sep-21-2011] | |||||||
| O35231 | 824 | Kinesin-like protein KIFC | no | no | 0.371 | 0.394 | 0.441 | 3e-70 | |
| O81635 | 987 | Kinesin-4 OS=Arabidopsis | no | no | 0.389 | 0.344 | 0.427 | 9e-70 | |
| Q9BVG8 | 833 | Kinesin-like protein KIFC | no | no | 0.371 | 0.390 | 0.435 | 1e-68 | |
| P46864 | 745 | Kinesin-2 OS=Arabidopsis | no | no | 0.381 | 0.446 | 0.409 | 2e-68 | |
| F4JGP4 | 790 | Kinesin-5 OS=Arabidopsis | no | no | 0.376 | 0.416 | 0.409 | 4e-66 | |
| P46875 | 754 | Kinesin-3 OS=Arabidopsis | no | no | 0.377 | 0.437 | 0.409 | 1e-65 | |
| Q07970 | 793 | Kinesin-1 OS=Arabidopsis | no | no | 0.374 | 0.412 | 0.413 | 3e-64 | |
| Q9FHN8 | 1260 | Kinesin-like calmodulin-b | no | no | 0.407 | 0.282 | 0.382 | 9e-64 | |
| Q7XPJ0 | 1248 | Kinesin-like calmodulin-b | no | no | 0.371 | 0.260 | 0.396 | 1e-62 | |
| O08672 | 792 | Kinesin-like protein KIFC | no | no | 0.362 | 0.400 | 0.379 | 6e-61 |
| >sp|O35231|KIFC3_MOUSE Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc3 PE=1 SV=4 | Back alignment and function desciption |
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Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 205/335 (61%), Gaps = 10/335 (2%)
Query: 7 IAGNIRVFCRIRPISM--GENFGRLRPV-IAKDSSNVLLKLADNKSKNYSFDKVFHPGSS 63
+ GNIRV R+RP++ GE V D +++ L K ++ DKVF P +S
Sbjct: 440 LKGNIRVIARVRPVTKEDGEGPEATNAVTFDPDDDSIIHLLHKGKPVSFELDKVFSPWAS 499
Query: 64 QDEVFSEVEPVIKSVLDGYNACIFAYGQTGTGKSFTMEGTPDSPGIVPRAIEAIFKQAME 123
Q +VF EV+ +I S +DG+N CIFAYGQTG GK++TMEGTP++PGI RA++ +F + E
Sbjct: 500 QQDVFQEVQALITSCIDGFNVCIFAYGQTGAGKTYTMEGTPENPGINQRALQLLFSEVQE 559
Query: 124 --SNHAFRISFSMLEIYLGSLKDLLVTQPTKATDPLPPCLSIHTEPKGGIEIDNLVTIQV 181
S+ + I+ S EIY L+DLL +P + + + + + G + + L QV
Sbjct: 560 KASDWQYNITVSAAEIYNEVLRDLLGKEPQEKLE-----IRLCPDGSGQLYVPGLTEFQV 614
Query: 182 NDFNQALRLYRLGCRFRSTASTNSNRTSSRSHCMIRISITCFDAPERRREKNKIWLVDLG 241
+ +++ G R+T TN N SSRSH ++ +++ D R K+ LVDL
Sbjct: 615 QSVDDINKVFEFGYNNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLA 674
Query: 242 GSERVLKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGED 301
GSERV K+ A G RL E + IN SLSALGDVI AL+ R+ HVP+RNSKLT +L+DSL D
Sbjct: 675 GSERVGKSGAEGNRLREAQHINRSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGD 734
Query: 302 SKTLMLVHVSPKEDDLCETICSLNFATRVKSVHLG 336
SKTLM+V VSP E + ET+ SL FA RV+SV LG
Sbjct: 735 SKTLMVVQVSPVEKNTSETLYSLRFAERVRSVELG 769
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Minus-end microtubule-dependent motor protein. Involved in apically targeted transport. Required for zonula adherens maintenance. Mus musculus (taxid: 10090) |
| >sp|O81635|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9BVG8|KIFC3_HUMAN Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=4 | Back alignment and function description |
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| >sp|P46864|ATK2_ARATH Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1 | Back alignment and function description |
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| >sp|F4JGP4|ATK5_ARATH Kinesin-5 OS=Arabidopsis thaliana GN=ATK5 PE=2 SV=1 | Back alignment and function description |
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| >sp|P46875|ATK3_ARATH Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q07970|ATK1_ARATH Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9FHN8|KCBP_ARATH Kinesin-like calmodulin-binding protein OS=Arabidopsis thaliana GN=KCBP PE=1 SV=1 | Back alignment and function description |
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| >sp|Q7XPJ0|KCBP_ORYSJ Kinesin-like calmodulin-binding protein homolog OS=Oryza sativa subsp. japonica GN=Os04g0666900 PE=2 SV=1 | Back alignment and function description |
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| >sp|O08672|KIFC2_MOUSE Kinesin-like protein KIFC2 OS=Mus musculus GN=Kifc2 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | ||||||
| 359478824 | 962 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.884 | 0.586 | 0.0 | |
| 255564782 | 945 | kinesin, putative [Ricinus communis] gi| | 0.973 | 0.900 | 0.581 | 0.0 | |
| 297746518 | 994 | unnamed protein product [Vitis vinifera] | 0.918 | 0.807 | 0.587 | 0.0 | |
| 147774373 | 1824 | hypothetical protein VITISV_041202 [Viti | 0.941 | 0.451 | 0.558 | 0.0 | |
| 224075954 | 827 | predicted protein [Populus trichocarpa] | 0.778 | 0.822 | 0.584 | 0.0 | |
| 224056919 | 645 | predicted protein [Populus trichocarpa] | 0.628 | 0.851 | 0.699 | 0.0 | |
| 4204259 | 887 | Similar to Kinesin proteins [Arabidopsis | 0.876 | 0.863 | 0.432 | 1e-168 | |
| 186491181 | 859 | P-loop containing nucleoside triphosphat | 0.689 | 0.701 | 0.498 | 1e-165 | |
| 297847924 | 855 | hypothetical protein ARALYDRAFT_474616 [ | 0.688 | 0.704 | 0.501 | 1e-163 | |
| 326533546 | 834 | predicted protein [Hordeum vulgare subsp | 0.638 | 0.669 | 0.493 | 1e-138 |
| >gi|359478824|ref|XP_002283784.2| PREDICTED: uncharacterized protein LOC100257047 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/876 (58%), Positives = 637/876 (72%), Gaps = 25/876 (2%)
Query: 7 IAGNIRVFCRIRPISMGENFGRLRPVIAKDSSNVLLKLADNKSKNYSFDKVFHPGSSQDE 66
+ GNIRVFCRIRPI++GEN L V+ DSSN LLKLA+NKSK YSFDKVFHPGSSQD+
Sbjct: 102 LKGNIRVFCRIRPITVGENSSHLSTVVTLDSSNALLKLAENKSKRYSFDKVFHPGSSQDD 161
Query: 67 VFSEVEPVIKSVLDGYNACIFAYGQTGTGKSFTMEGTPDSPGIVPRAIEAIFKQAMESNH 126
VF EVEPVIK+ LDGYNACIFAYGQTGTGK++TMEGTPD PG+VPRA+E +FKQA++SNH
Sbjct: 162 VFLEVEPVIKTALDGYNACIFAYGQTGTGKTYTMEGTPDCPGVVPRAMEVLFKQAVDSNH 221
Query: 127 AFRISFSMLEIYLGSLKDLLVTQPTKATDPLPPCLSIHTEPKGGIEIDNLVTIQVNDFNQ 186
AF SFSMLEIYLG+LKDLLV Q TK TDPLPP LS+HT+PKGGIEIDNLV+IQV+DFNQ
Sbjct: 222 AFLFSFSMLEIYLGNLKDLLVPQSTKVTDPLPPSLSVHTDPKGGIEIDNLVSIQVSDFNQ 281
Query: 187 ALRLYRLGCRFRSTASTNSNRTSSRSHCMIRISITCFDAPERRREKNKIWLVDLGGSERV 246
AL LYRLG RFRSTASTNSN SSRSHCMIRI++TC DAPERRRE NKIW+VDLGGSERV
Sbjct: 282 ALSLYRLGRRFRSTASTNSNIASSRSHCMIRITMTCSDAPERRRETNKIWMVDLGGSERV 341
Query: 247 LKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGEDSKTLM 306
LKTKA GRRL+EGKAINLSLSALG VI ALQR++RH+PYRNSKLTQVLKDSLGEDSKTLM
Sbjct: 342 LKTKASGRRLEEGKAINLSLSALGHVINALQRKRRHIPYRNSKLTQVLKDSLGEDSKTLM 401
Query: 307 LVHVSPKEDDLCETICSLNFATRVKSVHLGHEDSNEARDQKEVSMKNLQQKMKKIEEERL 366
LVHVSPKE+DLCET+CSLNFATRV+S+HL E+S E RDQKE++M NLQQK++ IE ER
Sbjct: 402 LVHVSPKEEDLCETVCSLNFATRVRSIHLVSEESTEIRDQKELAMTNLQQKIEWIEAERQ 461
Query: 367 RVRGEIENLSEKLEALTRPAHSFQEQLEVSHSS-EEPLSNLKCKKNKVDDVKVAPMSQLP 425
+R +I+ L+E+LE LTR S EQLE SH S EEP S ++ N+ DV AP+ ++P
Sbjct: 462 NIRRKIDKLNERLENLTRTISSSNEQLEASHPSMEEPQSKVEIISNRTGDVTAAPIPRIP 521
Query: 426 RFMSATLCSRRKSGIHLHNSEGKDRA-IRRKRPSSHRAESVTFPVKNKSEYNSEHSISRS 484
RFM T+CSRRKSGI NSE K A RR++ S AESV+FPVK SEY+S+HSISR+
Sbjct: 522 RFMRPTICSRRKSGIDHENSEKKGPASARRRKALSRHAESVSFPVKGISEYSSDHSISRT 581
Query: 485 SCLVGLNVKNSADYETEYSQETLDCDVKIETFLEQDRSQRTSIRQGAPPGYLEKCGSRKT 544
SCL GLN+K SAD ETEYSQ+T +CDVK+ F E++ R+SIR+ A + E+CG+RKT
Sbjct: 582 SCLAGLNLKCSADNETEYSQDTSECDVKMVVFPERENLLRSSIRKKAHFSHTEECGNRKT 641
Query: 545 GKFNTKKFSKVDDWL-LHKNEPTIAGFTHRSKRVLTIPIPGKKHRGREPSTAERLCNGPV 603
K ++ KFSKVD+WL LHKNEPTI + HRSK+VL IP P KK + +E+L + V
Sbjct: 642 DKLDSTKFSKVDNWLHLHKNEPTIRSYMHRSKQVLAIPNPEKKDECNGQNISEKLQDDKV 701
Query: 604 PAYEFTAENTASLNKMKKQFDVKGDELS---IPEVITERPLPMLKDLFEMDSRLDFISSS 660
E A NT + ++++K + GD ++ I EV ++ + LKD + + + S
Sbjct: 702 HNQEH-AINTIADHQIEK---LTGDGVAGTFISEVAIDKTVSELKDFISKNPNPNSVYPS 757
Query: 661 HTTVGQTVIQMQDFRDRLLIDDNNTSS-TPSLPDICCGTLNQYRDDDELYTMSIMQPVKG 719
H T G +IQ Q D L++++ T TP P++ C Q D+ + + I Q + G
Sbjct: 758 HATDGTNMIQTQGLVDGPLVEEDKTGPFTP--PEVLCVRFIQ-NTDNRMKGIPINQEITG 814
Query: 720 ELYCSESMLRNGG--CTFSPSESDNSTVGSKGDSGVSVSISDLDSLCEQASTEIGVNDNE 777
+ CS++ + N C F P + DN ++ DS VS SIS+L S C Q + V D E
Sbjct: 815 KTQCSDTFMLNNSNCCHFYPPDMDNGSIDLIEDSDVSTSISELKSHCPQVPSN-SVEDAE 873
Query: 778 EEELDASFEPFPMETRPSPLTLRSQRALFMNEVNQKDLNMHQKDLNMPYILSQGSTHSEG 837
+E L S + + TR RSQRALFM+ KDL M + SQG+ + G
Sbjct: 874 KESLCVSSQHLEIGTRSCLHRFRSQRALFMDTTKPKDLTMF-------FDESQGNMGT-G 925
Query: 838 TCYVLKKKIQILFASALLGLGLYDLGFDNDFFHGLM 873
C +LK+KI+I +ASALLGLG +LGF+++FF+GLM
Sbjct: 926 ICDLLKQKIRIFYASALLGLGFENLGFEHEFFYGLM 961
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255564782|ref|XP_002523385.1| kinesin, putative [Ricinus communis] gi|223537335|gb|EEF38964.1| kinesin, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|297746518|emb|CBI16574.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147774373|emb|CAN72398.1| hypothetical protein VITISV_041202 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224075954|ref|XP_002304845.1| predicted protein [Populus trichocarpa] gi|222842277|gb|EEE79824.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224056919|ref|XP_002299089.1| predicted protein [Populus trichocarpa] gi|222846347|gb|EEE83894.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|4204259|gb|AAD10640.1| Similar to Kinesin proteins [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|186491181|ref|NP_564696.2| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gi|332195144|gb|AEE33265.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297847924|ref|XP_002891843.1| hypothetical protein ARALYDRAFT_474616 [Arabidopsis lyrata subsp. lyrata] gi|297337685|gb|EFH68102.1| hypothetical protein ARALYDRAFT_474616 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|326533546|dbj|BAK05304.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 874 | ||||||
| TAIR|locus:2193914 | 859 | AT1G55550 [Arabidopsis thalian | 0.712 | 0.725 | 0.466 | 4.6e-144 | |
| TAIR|locus:2143759 | 625 | AT5G27950 [Arabidopsis thalian | 0.522 | 0.731 | 0.407 | 2e-88 | |
| ZFIN|ZDB-GENE-030131-3724 | 937 | kifc3 "kinesin family member C | 0.386 | 0.360 | 0.398 | 2.4e-61 | |
| UNIPROTKB|F1P0D6 | 371 | KIFC3 "Uncharacterized protein | 0.371 | 0.876 | 0.423 | 1.5e-60 | |
| UNIPROTKB|F1P110 | 399 | KIFC3 "Uncharacterized protein | 0.371 | 0.814 | 0.423 | 1.5e-60 | |
| TAIR|locus:2148543 | 987 | ATK4 "kinesin 4" [Arabidopsis | 0.399 | 0.353 | 0.4 | 3e-60 | |
| MGI|MGI:109202 | 824 | Kifc3 "kinesin family member C | 0.371 | 0.394 | 0.414 | 3.9e-60 | |
| UNIPROTKB|F1LPW9 | 824 | Kifc3 "Protein Kifc3" [Rattus | 0.371 | 0.394 | 0.414 | 3.9e-60 | |
| UNIPROTKB|E2QS65 | 764 | KIFC3 "Uncharacterized protein | 0.371 | 0.425 | 0.414 | 1.7e-59 | |
| UNIPROTKB|F6UN94 | 842 | KIFC3 "Uncharacterized protein | 0.371 | 0.385 | 0.414 | 1.7e-59 |
| TAIR|locus:2193914 AT1G55550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1408 (500.7 bits), Expect = 4.6e-144, P = 4.6e-144
Identities = 309/663 (46%), Positives = 418/663 (63%)
Query: 7 IAGNIRVFCRIRPISMGENFGRLRPVIAKDSSNVLLKLADNKSKNYSFDKVFHPGSSQDE 66
+ GNIRVFCR++P+ E +LRP +A D+ NV++KL++ K K Y+FD+VF P SSQD+
Sbjct: 88 LKGNIRVFCRVKPLGATE---KLRPPVASDTRNVIIKLSETKRKTYNFDRVFQPDSSQDD 144
Query: 67 VFSEVEPVIKSVLDGYNACIFAYGQTGTGKSFTMEGTPDSPGIVPRAIEAIFKQAMESNH 126
VF E+EPVIKSV+DGYNACIFAYGQTGTGK++TMEG P+SPGIVPRAI+ +FKQ ESNH
Sbjct: 145 VFLEIEPVIKSVIDGYNACIFAYGQTGTGKTYTMEGLPNSPGIVPRAIKGLFKQVEESNH 204
Query: 127 AFRISFSMLEIYLGSLKDLLVTQPTKATDPLPPCLSIHTEPKGGIEIDNLVTIQVNDFNQ 186
F I FSMLEIY+G+LKDLL+++ TK P+PP LSIHT+P G I+I+NLV ++V+DFN+
Sbjct: 205 MFTIHFSMLEIYMGNLKDLLLSEATKPISPIPPSLSIHTDPNGEIDIENLVKLKVDDFNE 264
Query: 187 ALRLYRLGCRFXXXXXXXXXXXXXXXHCMIRISITCFDAPERRREKNKIWLVDLGGSERV 246
LRLY++GCR HCMIR+S+T APERRRE NKIWLVDLGGSERV
Sbjct: 265 ILRLYKVGCRSRATASTNSNSVSSRSHCMIRVSVTSLGAPERRRETNKIWLVDLGGSERV 324
Query: 247 LKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGEDSKTLM 306
LKT+A GRR DEGKAINLSLSALGDVI +LQR+ H+PYRNSKLTQVLKDSLG+DSKTLM
Sbjct: 325 LKTRATGRRFDEGKAINLSLSALGDVINSLQRKNSHIPYRNSKLTQVLKDSLGQDSKTLM 384
Query: 307 LVHVSPKEDDLCETICSLNFATRVKSVHLGHEDSNEARDQKEVSMKNLQQKMKKIEEERL 366
LVH+SPKEDDLCETICSLNFATR K++HLG ++S E + +KE M NLQ+ M+KIE+ER
Sbjct: 385 LVHISPKEDDLCETICSLNFATRAKNIHLGQDESTEEQAKKEAVMMNLQKMMEKIEQERE 444
Query: 367 RVRGEIENLSEKLEALTRPAHSFQEQLEVSHSSEEPLSNLXXXXXXXXXXXXAPMSQL-P 425
++ NL+E LE LT H +E+ ++ + + S + P
Sbjct: 445 MSLRKMRNLNETLEKLTGKPHVIEEE------EKDVVREVIHVTPKKPRNKSRRASDVFP 498
Query: 426 RFMSATLCS-RRKSGIHLHNSEGKDR-AIRRKRPSSHRAESVTFPVKNKSEY------NS 477
FM T S RR SG + RR S RAES PVK K +S
Sbjct: 499 SFMRPTASSNRRLSGADFSVTPNSSSFKSRRNSMISVRAESACLPVKKKKNRFDSACDSS 558
Query: 478 EHSISRSSCLVGLNVKNSADYETEYSQETLDCDVKIETFLEQDRSQR----TSIRQGAPP 533
+ S+S+S+ ++ +N+AD T YSQ+ +CD+K+ + + + ++ + +
Sbjct: 559 DRSVSKSTSIMR---QNTADDATVYSQDISECDIKLVVSEHKPKPLQMGPGSATKSRSNI 615
Query: 534 GYLEKCGSRKTGKFNTKKFSKVDDWLLHKNEPTIAGFTHRSKRVLTIPIPGKKHRGREPS 593
EK +K G T+ FS+++ WL ++E + ++ +R E S
Sbjct: 616 SNFEKDVMQKIG--GTE-FSRINSWLRSQSENR--SYVLDKTQLPATHFLENLNRSLEKS 670
Query: 594 -----TAERLCNGPVPAYEFTAENTASLNK---MKKQFDVKG--DELSIPEVITERPLPM 643
T E++ + E T N +N +KK F+++ ++++ P+P
Sbjct: 671 PTQSFTTEKITGNELEGIEETKTNETVVNPTLMLKKLFELQCLCSAEEEDQILSRFPIPG 730
Query: 644 LKD 646
+D
Sbjct: 731 YED 733
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| TAIR|locus:2143759 AT5G27950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-3724 kifc3 "kinesin family member C3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P0D6 KIFC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1P110 KIFC3 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| TAIR|locus:2148543 ATK4 "kinesin 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| MGI|MGI:109202 Kifc3 "kinesin family member C3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1LPW9 Kifc3 "Protein Kifc3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2QS65 KIFC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F6UN94 KIFC3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00024860001 | SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (935 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 874 | |||
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 1e-160 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-118 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-117 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-114 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 1e-93 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 2e-82 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 1e-79 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 4e-79 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 2e-78 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 2e-78 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 6e-75 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 1e-72 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 1e-67 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 7e-67 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 2e-66 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 7e-66 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 2e-57 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 3e-42 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 5e-31 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-18 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 5e-05 |
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
Score = 470 bits (1211), Expect = e-160
Identities = 165/334 (49%), Positives = 222/334 (66%), Gaps = 12/334 (3%)
Query: 9 GNIRVFCRIRPISMGENFGRLRPVIAKDSSNVLLKLA--DNKSKNYSFDKVFHPGSSQDE 66
GNIRVFCR+RP+ E+ + D ++L+ K K++SFD+VF P +SQ++
Sbjct: 2 GNIRVFCRVRPLLPSESTEYSSVISFPDEDGGTIELSKGTGKKKSFSFDRVFDPDASQED 61
Query: 67 VFSEVEPVIKSVLDGYNACIFAYGQTGTGKSFTMEGTPDSPGIVPRAIEAIFKQAMESN- 125
VF EV P+++S LDGYN CIFAYGQTG+GK++TMEG P++PGI+PRA+E +F A E
Sbjct: 62 VFEEVSPLVQSALDGYNVCIFAYGQTGSGKTYTMEGPPENPGIIPRALEQLFNTAEELKE 121
Query: 126 --HAFRISFSMLEIYLGSLKDLLVTQPTKATDPLPPC-LSIHTEPKGGIEIDNLVTIQVN 182
++ I+ SMLEIY +++DLL AT P P L I + KG + NL + V+
Sbjct: 122 KGWSYTITASMLEIYNETIRDLL------ATKPAPKKKLEIKHDSKGETYVTNLTEVPVS 175
Query: 183 DFNQALRLYRLGCRFRSTASTNSNRTSSRSHCMIRISITCFDAPERRREKNKIWLVDLGG 242
+ RL LG + RS ASTN N SSRSH + ++ I + + + K+ LVDL G
Sbjct: 176 SPEEVTRLLNLGSKNRSVASTNMNEHSSRSHAVFQLKIRGTNLQTGEQTRGKLNLVDLAG 235
Query: 243 SERVLKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGEDS 302
SER+ K+ A G RL E +AIN SLSALGDVI AL+ + HVPYRNSKLT +L+DSLG +S
Sbjct: 236 SERLKKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVPYRNSKLTYLLQDSLGGNS 295
Query: 303 KTLMLVHVSPKEDDLCETICSLNFATRVKSVHLG 336
KTLM V++SP E +L ET+CSL FA+RV+SV LG
Sbjct: 296 KTLMFVNISPLESNLSETLCSLRFASRVRSVELG 329
|
Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 329 |
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 97.99 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 94.39 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 93.36 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 92.51 | |
| PRK06620 | 214 | hypothetical protein; Validated | 91.46 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 90.06 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 90.04 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 89.91 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 89.79 | |
| PRK12377 | 248 | putative replication protein; Provisional | 89.16 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 88.36 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 88.29 | |
| PRK08116 | 268 | hypothetical protein; Validated | 88.14 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 88.13 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 87.11 | |
| COG0593 | 408 | DnaA ATPase involved in DNA replication initiation | 86.89 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 86.88 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 86.86 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 86.27 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 86.0 | |
| PRK09087 | 226 | hypothetical protein; Validated | 85.48 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 85.01 | |
| COG1474 | 366 | CDC6 Cdc6-related protein, AAA superfamily ATPase | 84.27 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 83.75 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 83.09 | |
| PRK12422 | 445 | chromosomal replication initiation protein; Provis | 81.72 | |
| COG1484 | 254 | DnaC DNA replication protein [DNA replication, rec | 81.04 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 80.9 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 80.62 |
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-84 Score=764.84 Aligned_cols=329 Identities=40% Similarity=0.624 Sum_probs=296.8
Q ss_pred CCCEEEEEEeCCCCCCcCCCCCCcEEEeCCC-c-eEEEec-CCC--CceeEeceeeCCCCChHHHHHh-hHHHHHHhhcC
Q 002847 8 AGNIRVFCRIRPISMGENFGRLRPVIAKDSS-N-VLLKLA-DNK--SKNYSFDKVFHPGSSQDEVFSE-VEPVIKSVLDG 81 (874)
Q Consensus 8 kgnIrV~VRIRPl~~~E~~~~~~~vI~~d~~-~-v~l~~~-~~~--~k~F~FD~VF~~~asQeeVF~~-V~PlV~svLdG 81 (874)
.-||+|+|||||++..|.......||.+++. . +.+... .++ .+.|+||+||+|.+.|++||+. |.|+|+.|+.|
T Consensus 48 ~~NIqVivRcRp~n~~E~~~~s~~VVs~~~~~kEV~v~~~~~sk~~~k~ftFDkVFGpes~Q~d~Y~~~v~p~i~eVl~G 127 (1041)
T KOG0243|consen 48 EVNIQVIVRCRPRNDRERKSKSSVVVSCDGIRKEVAVRQTIASKQIDKTFTFDKVFGPESQQEDLYDQAVSPIIKEVLEG 127 (1041)
T ss_pred CCceEEEEEeCCCCchhhhcCCCeEEecCCCcceEEEecccccccccceeecceeeCcchhHHHHHHHHHHHHHHHHhcc
Confidence 3699999999999999988777778888873 3 333322 123 6899999999999999999998 79999999999
Q ss_pred CCeeEEEeccCCCCcceeccC--------CCCCCCcHHHHHHHHHHHHHhcCCeeEEEEEEEEEecceeecccCCCCCCC
Q 002847 82 YNACIFAYGQTGTGKSFTMEG--------TPDSPGIVPRAIEAIFKQAMESNHAFRISFSMLEIYLGSLKDLLVTQPTKA 153 (874)
Q Consensus 82 yN~TIfAYGQTGSGKTyTM~G--------s~e~~GIIPRaledLF~~i~e~~~~f~VsVS~lEIYNEkV~DLL~~~~~~~ 153 (874)
||||||||||||+||||||+| .+.++|||||++.+||+.+...+..|.|+|||+|+|||.++|||++.....
T Consensus 128 yNCTIFAYGQTGTGKTyTMeG~~~~~~g~l~~~aGIIPRal~~IFd~Le~~~~EYsvKVSfLELYNEEl~DLLa~~~~~~ 207 (1041)
T KOG0243|consen 128 YNCTIFAYGQTGTGKTYTMEGGERKKNGELPSEAGIIPRALRQIFDTLEAQGAEYSVKVSFLELYNEELTDLLASEDTSD 207 (1041)
T ss_pred CCceEEEecCCCCCceeeeecCcccccCCCCccCCcchHHHHHHHHHHHhcCCeEEEEEEehhhhhHHHHHhcCCccccc
Confidence 999999999999999999999 567899999999999999999999999999999999999999999876531
Q ss_pred CCCCCCcceeee-----cCCCcEEecCcEEEEeCCHHHHHHHHHHhccccccccccCCCCCCCceEEEEEEEEEecC---
Q 002847 154 TDPLPPCLSIHT-----EPKGGIEIDNLVTIQVNDFNQALRLYRLGCRFRSTASTNSNRTSSRSHCMIRISITCFDA--- 225 (874)
Q Consensus 154 ~~~~~~~L~I~e-----d~~ggv~V~gLtev~V~S~eEal~lL~~G~~nR~tasT~~N~~SSRSHaIftI~I~~~d~--- 225 (874)
..+.+.+ +.++||.|+||.++.|.++.|++.+|.+|...|++++|.||.+|||||+||+|+|.....
T Consensus 208 -----~~~~~k~~~~~~~~kggV~vkGlEEi~V~~A~ei~klLekGs~kRrtAaTl~N~~SSRSHsIFsItvhike~t~~ 282 (1041)
T KOG0243|consen 208 -----KKLRIKDDSTIVDGKGGVIVKGLEEIIVTNADEIYKLLEKGSKKRRTAATLMNDQSSRSHSIFSITVHIKENTPE 282 (1041)
T ss_pred -----cccccccCCcccCCcCcEEEecceeeeecchhHHHHHHHhhhhHhHHHHHHhhhhccccceEEEEEEEEecCCCc
Confidence 1122222 678999999999999999999999999999999999999999999999999999964332
Q ss_pred CccccccceeEEEeccCccccccccccchhhHHHHHhhhhHHHHHHHHHHHhcCCCCccCCCCccccccccccCCCceee
Q 002847 226 PERRREKNKIWLVDLGGSERVLKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGEDSKTL 305 (874)
Q Consensus 226 ~e~~~~~SkL~LVDLAGSER~~kt~a~G~rlkEg~~INkSLsALg~VI~ALs~k~~hIPYRDSKLTrLLqDSLGGNSKT~ 305 (874)
++.....|||+||||||||...++|+.+.|.+|++.||+||++||+||+||.++..|||||+|||||||||||||.+||+
T Consensus 283 geelvK~GKLNLVDLAGSENI~RSGA~~~RArEAG~INqSLLTLGRVInALVe~s~HIPYRESKLTRLLQDSLGGkTKT~ 362 (1041)
T KOG0243|consen 283 GEELVKIGKLNLVDLAGSENISRSGARNGRAREAGEINQSLLTLGRVINALVEHSGHIPYRESKLTRLLQDSLGGKTKTC 362 (1041)
T ss_pred chhhHhhcccceeeccccccccccccccchhHHhhhhhHHHHHHHHHHHHHHccCCCCCchHHHHHHHHHHHhCCCceeE
Confidence 33456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhhccccCcCCch
Q 002847 306 MLVHVSPKEDDLCETICSLNFATRVKSVHLGHEDSN 341 (874)
Q Consensus 306 mIa~ISPs~~~~eETLsTLrFAsRAK~Ik~~~~~~~ 341 (874)
|||||||+..+++||++||.||.|||+|+.+|+.+.
T Consensus 363 iIATiSPa~~~lEETlSTLEYA~RAKnIkNKPevNQ 398 (1041)
T KOG0243|consen 363 IIATISPAKHNLEETLSTLEYAHRAKNIKNKPEVNQ 398 (1041)
T ss_pred EEEEeCCCcccHHHHHHHHHHHHHhhhccCCCccch
Confidence 999999999999999999999999999999887764
|
|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK12422 chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 874 | ||||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 7e-63 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 1e-60 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 9e-60 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 2e-53 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 4e-52 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 4e-52 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 1e-51 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 3e-51 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 3e-51 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-49 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 9e-49 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 1e-48 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-47 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 2e-47 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 3e-47 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 3e-47 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 2e-46 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 2e-45 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 4e-45 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 9e-44 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 2e-43 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 2e-43 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 3e-43 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 3e-43 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 3e-43 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 3e-43 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 3e-43 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 3e-43 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 5e-43 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-42 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 4e-42 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 5e-42 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 5e-42 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 2e-41 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-41 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-41 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 3e-41 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-41 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 2e-39 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 2e-39 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-38 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 6e-38 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 5e-37 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 7e-37 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-35 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 2e-35 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-35 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 4e-35 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 2e-26 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 2e-26 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 6e-26 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 5e-25 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 5e-25 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 9e-25 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 3e-22 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 1e-21 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 4e-10 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 4e-10 |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
|
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
Score = 461 bits (1189), Expect = e-157
Identities = 143/332 (43%), Positives = 200/332 (60%), Gaps = 10/332 (3%)
Query: 9 GNIRVFCRIRPISMGENFGRLRPVIAK---DSSNVLLKLADNKSKNYSFDKVFHPGSSQD 65
GNIRV R+RP++ + G D +++ L K ++ DKVF P +SQ
Sbjct: 4 GNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQ 63
Query: 66 EVFSEVEPVIKSVLDGYNACIFAYGQTGTGKSFTMEGTPDSPGIVPRAIEAIFK--QAME 123
+VF EV+ ++ S +DG+N CIFAYGQTG GK++TMEGT ++PGI RA++ +F Q
Sbjct: 64 DVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKA 123
Query: 124 SNHAFRISFSMLEIYLGSLKDLLVTQPTKATDPLPPCLSIHTEPKGGIEIDNLVTIQVND 183
S+ + I+ S EIY L+DLL +P + + + + + G + + L QV
Sbjct: 124 SDWEYTITVSAAEIYNEVLRDLLGKEPQEKLE-----IRLCPDGSGQLYVPGLTEFQVQS 178
Query: 184 FNQALRLYRLGCRFRSTASTNSNRTSSRSHCMIRISITCFDAPERRREKNKIWLVDLGGS 243
+ +++ G R+T TN N SSRSH ++ +++ D R K+ LVDL GS
Sbjct: 179 VDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGS 238
Query: 244 ERVLKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGEDSK 303
ERV K+ A G RL E + IN SLSALGDVI AL+ R+ HVP+RNSKLT +L+DSL DSK
Sbjct: 239 ERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSK 298
Query: 304 TLMLVHVSPKEDDLCETICSLNFATRVKSVHL 335
TLM+V VSP E + ET+ SL FA RV+SV L
Sbjct: 299 TLMVVQVSPVEKNTSETLYSLKFAERVRSVEL 330
|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 100.0 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 100.0 | |
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 100.0 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 100.0 | |
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 100.0 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 100.0 | |
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 100.0 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 100.0 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 100.0 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 100.0 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 100.0 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 100.0 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 100.0 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 100.0 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 100.0 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 100.0 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 100.0 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 100.0 | |
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 100.0 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 100.0 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 100.0 | |
| 3nwn_A | 359 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 100.0 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 100.0 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 100.0 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 100.0 | |
| 4h1g_A | 715 | Maltose binding protein-cakar3 motor domain fusio; | 100.0 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 99.93 | |
| 2o0a_A | 298 | S.cerevisiae chromosome XVI reading frame ORF YPL2 | 99.93 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 99.92 | |
| 4etp_B | 333 | Spindle POLE BODY-associated protein VIK1; kinesin | 94.81 | |
| 3ec2_A | 180 | DNA replication protein DNAC; helicase loader, rep | 94.15 | |
| 2w58_A | 202 | DNAI, primosome component (helicase loader); ATP-b | 93.04 | |
| 2qgz_A | 308 | Helicase loader, putative primosome component; str | 90.62 | |
| 2bjv_A | 265 | PSP operon transcriptional activator; AAA, transcr | 83.47 | |
| 3bos_A | 242 | Putative DNA replication factor; P-loop containing | 83.07 | |
| 1jbk_A | 195 | CLPB protein; beta barrel, chaperone; 1.80A {Esche | 82.58 | |
| 1l8q_A | 324 | Chromosomal replication initiator protein DNAA; AA | 81.3 |
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-87 Score=738.46 Aligned_cols=331 Identities=38% Similarity=0.652 Sum_probs=296.7
Q ss_pred ccCCCCEEEEEEeCCCCCCcCCCCCCcEEEeCCCceE-EEecCCCCceeEeceeeCCCCChHHHHHhhHHHHHHhhcCCC
Q 002847 5 SAIAGNIRVFCRIRPISMGENFGRLRPVIAKDSSNVL-LKLADNKSKNYSFDKVFHPGSSQDEVFSEVEPVIKSVLDGYN 83 (874)
Q Consensus 5 ~~~kgnIrV~VRIRPl~~~E~~~~~~~vI~~d~~~v~-l~~~~~~~k~F~FD~VF~~~asQeeVF~~V~PlV~svLdGyN 83 (874)
.|++|+|+|+|||||++..|.......++...+...+ .....+..+.|.||+||+++++|++||+.++|+|+++++|||
T Consensus 1 ee~~~~i~V~vRvRP~~~~E~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~lv~~~l~G~n 80 (369)
T 3cob_A 1 EDMKGKIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYN 80 (369)
T ss_dssp ---CCBCEEEEEECCCCHHHHHTTCCBCEEECSSSEEEEECTTSCEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCE
T ss_pred CCCCCCeEEEEECCCCChhhccCCCcEEEEcCCcEEEEecCCCCCceEEecCEEECCCCCcceehhhhhhhhHhhhcCCc
Confidence 4789999999999999988754333333333333222 222334568999999999999999999999999999999999
Q ss_pred eeEEEeccCCCCcceeccCCCCCCCcHHHHHHHHHHHHHhcC--CeeEEEEEEEEEecceeecccCCCCCCCCCCCCCcc
Q 002847 84 ACIFAYGQTGTGKSFTMEGTPDSPGIVPRAIEAIFKQAMESN--HAFRISFSMLEIYLGSLKDLLVTQPTKATDPLPPCL 161 (874)
Q Consensus 84 ~TIfAYGQTGSGKTyTM~Gs~e~~GIIPRaledLF~~i~e~~--~~f~VsVS~lEIYNEkV~DLL~~~~~~~~~~~~~~L 161 (874)
+||||||||||||||||+|+++++|||||++++||+.+.... ..|.|++||+|||||+|+|||.+.... ...+
T Consensus 81 ~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~~-----~~~l 155 (369)
T 3cob_A 81 VCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAK-----RLKL 155 (369)
T ss_dssp EEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTTEEEEEEEEEEEECSSCEEESSCCSSSC-----CCCC
T ss_pred eEEEEECCCCCCCeEeecCCCCCCchhHHHHHHHHHHHHhhccCceeEEEEEEEEEeCceeeecCCCcccC-----Ccce
Confidence 999999999999999999999999999999999999987543 489999999999999999999865321 2458
Q ss_pred eeeecCCCcEEecCcEEEEeCCHHHHHHHHHHhccccccccccCCCCCCCceEEEEEEEEEecCCccccccceeEEEecc
Q 002847 162 SIHTEPKGGIEIDNLVTIQVNDFNQALRLYRLGCRFRSTASTNSNRTSSRSHCMIRISITCFDAPERRREKNKIWLVDLG 241 (874)
Q Consensus 162 ~I~ed~~ggv~V~gLtev~V~S~eEal~lL~~G~~nR~tasT~~N~~SSRSHaIftI~I~~~d~~e~~~~~SkL~LVDLA 241 (874)
.|++++.++++|.||+++.|.+++|++++|..|.++|++++|.+|..|||||+||+|+|++.+........|+|+|||||
T Consensus 156 ~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLA 235 (369)
T 3cob_A 156 DIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLA 235 (369)
T ss_dssp EEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECC
T ss_pred EEEECCCCCEEccCCEEEEeCCHHHHHHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCCCCcEEEEEEEEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999988776667788999999999
Q ss_pred CccccccccccchhhHHHHHhhhhHHHHHHHHHHHhcCCCCccCCCCccccccccccCCCceeeEEEecCCCCCCHHHHH
Q 002847 242 GSERVLKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGEDSKTLMLVHVSPKEDDLCETI 321 (874)
Q Consensus 242 GSER~~kt~a~G~rlkEg~~INkSLsALg~VI~ALs~k~~hIPYRDSKLTrLLqDSLGGNSKT~mIa~ISPs~~~~eETL 321 (874)
||||+.++++.|.+++|+.+||+||++||+||.||+.++.||||||||||+||||+|||||+|+|||||||+..+++||+
T Consensus 236 GSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl 315 (369)
T 3cob_A 236 GSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETH 315 (369)
T ss_dssp CSSCCCCCSSCSHHHHHHHHHTHHHHHHHHHHHHHHTTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHH
T ss_pred CCCcccccCccchhhHHHHHHHHHHHHHHHHHHHHhcCCCcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccccCcCCc
Q 002847 322 CSLNFATRVKSVHLGHEDS 340 (874)
Q Consensus 322 sTLrFAsRAK~Ik~~~~~~ 340 (874)
+||+||+|||+|++.+...
T Consensus 316 ~TLrfA~rak~i~~~~~~n 334 (369)
T 3cob_A 316 NSLTYASRVRSIVNDPSKN 334 (369)
T ss_dssp HHHHHHHHHHTCBCCCCCC
T ss_pred HHHHHHHHHhhcccCCccc
Confidence 9999999999999876544
|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* | Back alignment and structure |
|---|
| >4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >4etp_B Spindle POLE BODY-associated protein VIK1; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* | Back alignment and structure |
|---|
| >2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} | Back alignment and structure |
|---|
| >2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* | Back alignment and structure |
|---|
| >3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A | Back alignment and structure |
|---|
| >1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 874 | ||||
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 1e-76 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 5e-74 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 1e-73 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 4e-72 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 3e-71 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 5e-70 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 2e-68 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 3e-68 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 5e-66 |
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Human (Homo sapiens) [TaxId: 9606]
Score = 250 bits (639), Expect = 1e-76
Identities = 122/330 (36%), Positives = 181/330 (54%), Gaps = 18/330 (5%)
Query: 10 NIRVFCRIRPISMGENFGRLRPVIAKDSSNVLLKLADNKSKNYSFDKVFHPGSSQDEVFS 69
NI+V CR RP++ E + + + ++ SK Y+FD+VF +SQ++V++
Sbjct: 6 NIKVMCRFRPLNESEVNRGDKYIAKFQGEDTVV----IASKPYAFDRVFQSSTSQEQVYN 61
Query: 70 E-VEPVIKSVLDGYNACIFAYGQTGTGKSFTMEGTPDSP---GIVPRAIEAIFKQAM--E 123
+ + ++K VL+GYN IFAYGQT +GK+ TMEG P GI+PR ++ IF +
Sbjct: 62 DCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFNYIYSMD 121
Query: 124 SNHAFRISFSMLEIYLGSLKDLLVTQPTKATDPLPPCLSIHTEPKGGIEIDNLVTIQVND 183
N F I S EIYL ++DLL D LS+H + + V
Sbjct: 122 ENLEFHIKVSYFEIYLDKIRDLL--------DVSKTNLSVHEDKNRVPYVKGCTERFVCS 173
Query: 184 FNQALRLYRLGCRFRSTASTNSNRTSSRSHCMIRISITCFDAPERRREKNKIWLVDLGGS 243
++ + G R A TN N SSRSH + I++ + ++ K++LVDL GS
Sbjct: 174 PDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGS 233
Query: 244 ERVLKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGEDSK 303
E+V KT A G LDE K IN SLSALG+VI AL +VPYR+SK+T++L+DSLG + +
Sbjct: 234 EKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCR 293
Query: 304 TLMLVHVSPKEDDLCETICSLNFATRVKSV 333
T +++ SP + ET +L F R K++
Sbjct: 294 TTIVICCSPSSYNESETKSTLLFGQRAKTI 323
|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 874 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 94.01 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 88.15 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 87.32 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 85.81 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 83.1 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 83.02 | |
| d1d2na_ | 246 | Hexamerization domain of N-ethylmalemide-sensitive | 81.66 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=6.4e-80 Score=673.25 Aligned_cols=325 Identities=39% Similarity=0.657 Sum_probs=287.7
Q ss_pred CEEEEEEeCCCCCCcCCCCCCcEEEeCCC-ceEEEecCCCCceeEeceeeCCCCChHHHHHhhHHHHHHhhcCCCeeEEE
Q 002847 10 NIRVFCRIRPISMGENFGRLRPVIAKDSS-NVLLKLADNKSKNYSFDKVFHPGSSQDEVFSEVEPVIKSVLDGYNACIFA 88 (874)
Q Consensus 10 nIrV~VRIRPl~~~E~~~~~~~vI~~d~~-~v~l~~~~~~~k~F~FD~VF~~~asQeeVF~~V~PlV~svLdGyN~TIfA 88 (874)
.|+|+|||||+...|.......++...+. .+.........+.|.||+||+++++|++||+.|+|+|+++++|||+||||
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~q~~vy~~v~~lv~~~l~G~n~~i~a 80 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDDKAKQHMYDRVFDGNATQDDVFEDTKYLVQSAVDGYNVCIFA 80 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSSSEEEEECSEEECTTCCHHHHHHTTTHHHHHHHTTCEEEEEE
T ss_pred CeEEEEEcCCCChhhcccCCCCeEEeCCCCeEEecCCCCCceEEECCeecCCCCCHHHHHHHHHHHHHHHhcCCceeeec
Confidence 58999999999988754444444444444 44444455567899999999999999999998999999999999999999
Q ss_pred eccCCCCcceeccCCCCCCCcHHHHHHHHHHHHHh--cCCeeEEEEEEEEEecceeecccCCCCCCCCCCCCCcceeeec
Q 002847 89 YGQTGTGKSFTMEGTPDSPGIVPRAIEAIFKQAME--SNHAFRISFSMLEIYLGSLKDLLVTQPTKATDPLPPCLSIHTE 166 (874)
Q Consensus 89 YGQTGSGKTyTM~Gs~e~~GIIPRaledLF~~i~e--~~~~f~VsVS~lEIYNEkV~DLL~~~~~~~~~~~~~~L~I~ed 166 (874)
||||||||||||+|+.+++||+||++++||+.+.+ ....|.|++||+|||||+|+|||.+.... ...+.++++
T Consensus 81 YGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~-----~~~l~~~~~ 155 (364)
T d1sdma_ 81 YGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAK-----RLKLDIKKD 155 (364)
T ss_dssp ECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSC-----CCCCEEEEC
T ss_pred cccCCCCcccccccCccccchhHHHHHHHHhhhhhccccccceEEEEEEEEeccccccccCccccc-----ccccceeec
Confidence 99999999999999999999999999999998864 34689999999999999999999875432 234788999
Q ss_pred CCCcEEecCcEEEEeCCHHHHHHHHHHhccccccccccCCCCCCCceEEEEEEEEEecCCccccccceeEEEeccCcccc
Q 002847 167 PKGGIEIDNLVTIQVNDFNQALRLYRLGCRFRSTASTNSNRTSSRSHCMIRISITCFDAPERRREKNKIWLVDLGGSERV 246 (874)
Q Consensus 167 ~~ggv~V~gLtev~V~S~eEal~lL~~G~~nR~tasT~~N~~SSRSHaIftI~I~~~d~~e~~~~~SkL~LVDLAGSER~ 246 (874)
+.++++|.|++++.|.++++++.++..|.++|.+++|.+|..|||||+||+|++.+.+........++|+|||||||||.
T Consensus 156 ~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~~~~~~kl~~vDLAGsEr~ 235 (364)
T d1sdma_ 156 SKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERV 235 (364)
T ss_dssp TTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCSCC
T ss_pred ccCccccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccCcceeeeEEEEeechhhcccc
Confidence 99999999999999999999999999999999999999999999999999999999888777778999999999999999
Q ss_pred ccccccchhhHHHHHhhhhHHHHHHHHHHHhcCCCCccCCCCccccccccccCCCceeeEEEecCCCCCCHHHHHHHHHH
Q 002847 247 LKTKARGRRLDEGKAINLSLSALGDVIYALQRRKRHVPYRNSKLTQVLKDSLGEDSKTLMLVHVSPKEDDLCETICSLNF 326 (874)
Q Consensus 247 ~kt~a~G~rlkEg~~INkSLsALg~VI~ALs~k~~hIPYRDSKLTrLLqDSLGGNSKT~mIa~ISPs~~~~eETLsTLrF 326 (874)
.++++.|.+++|+.+||+||++|++||.||+++..|||||+||||+||+|+|||||+|+||+||||+..+++||++||+|
T Consensus 236 ~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~f 315 (364)
T d1sdma_ 236 KKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTY 315 (364)
T ss_dssp CC---------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHH
T ss_pred ccccccCceeeeccccccchhhHHHHHHHHHcCCCcCCchhhhhhHHHHhhcCCCceEEEEEEeCCCcchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccCcCC
Q 002847 327 ATRVKSVHLGHED 339 (874)
Q Consensus 327 AsRAK~Ik~~~~~ 339 (874)
|+|||+|++.+..
T Consensus 316 a~~ak~i~n~p~~ 328 (364)
T d1sdma_ 316 ASRVRSIVNDPSK 328 (364)
T ss_dssp HHHHTTCCCCCCC
T ss_pred HHHHhhcccCCcc
Confidence 9999999976654
|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|