Citrus Sinensis ID: 002940
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 863 | ||||||
| 224053368 | 858 | predicted protein [Populus trichocarpa] | 0.972 | 0.977 | 0.688 | 0.0 | |
| 225435510 | 864 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.969 | 0.675 | 0.0 | |
| 224075776 | 858 | predicted protein [Populus trichocarpa] | 0.964 | 0.969 | 0.680 | 0.0 | |
| 359478753 | 874 | PREDICTED: uncharacterized protein LOC10 | 0.966 | 0.954 | 0.664 | 0.0 | |
| 449448754 | 868 | PREDICTED: uncharacterized protein LOC10 | 0.958 | 0.952 | 0.645 | 0.0 | |
| 356541181 | 854 | PREDICTED: uncharacterized protein LOC10 | 0.967 | 0.977 | 0.636 | 0.0 | |
| 356541912 | 854 | PREDICTED: uncharacterized protein LOC10 | 0.965 | 0.975 | 0.639 | 0.0 | |
| 15239944 | 861 | uncharacterized protein [Arabidopsis tha | 0.975 | 0.977 | 0.611 | 0.0 | |
| 297807309 | 860 | hypothetical protein ARALYDRAFT_350453 [ | 0.968 | 0.972 | 0.607 | 0.0 | |
| 356557388 | 841 | PREDICTED: uncharacterized protein LOC10 | 0.952 | 0.977 | 0.620 | 0.0 |
| >gi|224053368|ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1233 bits (3190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/863 (68%), Positives = 708/863 (82%), Gaps = 24/863 (2%)
Query: 14 LLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWL 73
L+ ++ +KECTN +L+SHTFR LLSS+NE++ +++ +H HLTP+DDSAW
Sbjct: 7 LVVLSMLCGFGTSKECTNTPTQLSSHTFRYALLSSENETWKEEMFAHY-HLTPTDDSAWA 65
Query: 74 SLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWR 133
+L+PRKILREE++ +SWAM+YR +K+P + SG FLKEVSLH+VRL S+HW+
Sbjct: 66 NLLPRKILREEDE---YSWAMMYRNLKSP-----LKSSGNFLKEVSLHNVRLDPSSIHWQ 117
Query: 134 AQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMW 193
AQQTNLEYLLMLDVD LVW+FRKTA L PG YGGWE P+CELRGHFVGHYLSASA MW
Sbjct: 118 AQQTNLEYLLMLDVDSLVWSFRKTAGLSTPGTAYGGWEAPNCELRGHFVGHYLSASAQMW 177
Query: 194 ASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILA 253
ASTHN+ L+++MSAVVSALS+CQ+++GSGYLSAFP+E FDR EA+ PVWAPYYTIHKILA
Sbjct: 178 ASTHNDILEKQMSAVVSALSSCQEKMGSGYLSAFPSELFDRFEAIKPVWAPYYTIHKILA 237
Query: 254 GLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLF 313
GLLDQYT+ADNA+AL+M WMV+YFYNRV+NVI +S+ERH+Q+LNEE GGMNDVLYKLF
Sbjct: 238 GLLDQYTFADNAQALKMVKWMVDYFYNRVRNVITNFSVERHYQSLNEETGGMNDVLYKLF 297
Query: 314 CITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKE 373
IT DPKHL+LAHLFDKPCFLGLLA+QA+DISGFH+NTHIPIVIG+QMRYE+TGD L+K+
Sbjct: 298 SITGDPKHLVLAHLFDKPCFLGLLAVQAEDISGFHANTHIPIVIGAQMRYEITGDPLYKD 357
Query: 374 -----------GHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFR 422
H + GT++ F SDPKRLAS L + EESCTTYNMLKVSRHLFR
Sbjct: 358 IGTFFMDIVNSSHSYATGGTSVSE--FWSDPKRLASTLQTENEESCTTYNMLKVSRHLFR 415
Query: 423 WTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCC 482
WTKE+AYADYYER+LTNGVLGIQRGTEPGVMIY+LP PGSSK +SYH WGT D+FWCC
Sbjct: 416 WTKEMAYADYYERALTNGVLGIQRGTEPGVMIYMLPQHPGSSKGKSYHGWGTLYDTFWCC 475
Query: 483 YGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLR 542
YGTGIESFSKLGDSIYFEEEG+ PG+YIIQYISS LDWKSGQI++NQKVDPVVS DPYLR
Sbjct: 476 YGTGIESFSKLGDSIYFEEEGEAPGLYIIQYISSSLDWKSGQIMINQKVDPVVSSDPYLR 535
Query: 543 VTLTFS-SKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKL 601
VT TFS +KGS ++LNLRIP WT +GA AT+N Q L +P+PG+FLSV + WSS DKL
Sbjct: 536 VTFTFSPNKGSSQASTLNLRIPVWTHLDGATATINSQSLAIPAPGSFLSVNRKWSSGDKL 595
Query: 602 TIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITE-SATSLSDWITPIPA 660
++QLP++LRTEAIQDDR +YASIQAILYGPY+LAGH+ GDW++ SA SLSD ITPIPA
Sbjct: 596 SLQLPISLRTEAIQDDRHQYASIQAILYGPYLLAGHTSGDWNLKAGSAGSLSDSITPIPA 655
Query: 661 SYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSL 720
SYN QL++F+Q+ GN+ FVLTNSNQSITME+ PKSGTDA L ATFR++ NDSS SE +
Sbjct: 656 SYNEQLVSFSQDSGNSTFVLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVLGI 715
Query: 721 NDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLES 780
ND I KSVMLEPFD PGML++Q D L VT+S GSS+FH+V GLDG D TVSLES
Sbjct: 716 NDVIDKSVMLEPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSLES 775
Query: 781 ETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANR 840
+ +GC++Y+ VN +S +S KL C S++ GFN ASFV+ KGLSEYHPISFVA+G R
Sbjct: 776 GSQEGCYIYSGVNYKSGQSMKLSCKLGSSDPGFNQGASFVMNKGLSEYHPISFVAEGDKR 835
Query: 841 NFLLAPLLSLRDESYTVYFDFQS 863
NFLLAPL SLRDE YT+YF+ Q+
Sbjct: 836 NFLLAPLHSLRDEFYTIYFNIQA 858
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225435510|ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224075776|ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|359478753|ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449448754|ref|XP_004142130.1| PREDICTED: uncharacterized protein LOC101207833 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356541181|ref|XP_003539059.1| PREDICTED: uncharacterized protein LOC100781521 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356541912|ref|XP_003539416.1| PREDICTED: uncharacterized protein LOC100783150 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|15239944|ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana] gi|7630051|emb|CAB88259.1| putative protein [Arabidopsis thaliana] gi|26451123|dbj|BAC42665.1| unknown protein [Arabidopsis thaliana] gi|332004451|gb|AED91834.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297807309|ref|XP_002871538.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] gi|297317375|gb|EFH47797.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|356557388|ref|XP_003546998.1| PREDICTED: uncharacterized protein LOC100815634 [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 863 | ||||||
| TAIR|locus:2182280 | 861 | AT5G12950 [Arabidopsis thalian | 0.973 | 0.975 | 0.615 | 1.9e-289 | |
| TAIR|locus:2182295 | 865 | AT5G12960 [Arabidopsis thalian | 0.968 | 0.966 | 0.612 | 6.8e-285 | |
| UNIPROTKB|Q2KGY9 | 633 | MGCH7_ch7g196 "Putative unchar | 0.565 | 0.770 | 0.312 | 2.2e-50 |
| TAIR|locus:2182280 AT5G12950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2780 (983.7 bits), Expect = 1.9e-289, P = 1.9e-289
Identities = 536/871 (61%), Positives = 661/871 (75%)
Query: 7 SIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTP 66
+I + +F+L+ + AKECTN +L+SHTFRS LL SKNE+ ++ SH HLTP
Sbjct: 8 TIALLLYTSSFVLV---SVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY-HLTP 63
Query: 67 SDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLG 126
+DDSAW SL+PRK+L+EE DE F+W MLYRK FK SG FLK+VSLHDVRL
Sbjct: 64 ADDSAWSSLLPRKMLKEEA-DE-FAWTMLYRK------FKDSNSSGNFLKDVSLHDVRLD 115
Query: 127 SDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYL 186
DS HWRAQQTNLEYLLMLDVD L W+FRK A L APG+ YGGWE P ELRGHFVGHYL
Sbjct: 116 PDSFHWRAQQTNLEYLLMLDVDGLAWSFRKEAGLDAPGDYYGGWERPDSELRGHFVGHYL 175
Query: 187 SASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYY 246
SA+A MWASTHN++LKEKMSA+VSALS CQ++ G+GYLSAFP+ FDR EA+ PVWAPYY
Sbjct: 176 SATAYMWASTHNDTLKEKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAPYY 235
Query: 247 TIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMN 306
TIHKILAGL+DQY A N++AL+M T M +YFY RV+NVI+KYS+ERHWQ+LNEE GGMN
Sbjct: 236 TIHKILAGLVDQYKLAGNSQALKMATGMADYFYGRVRNVIRKYSVERHWQSLNEETGGMN 295
Query: 307 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVT 366
DVLY+L+ IT D K+L+LAHLFDKPCFLG+LA+QADDISGFH+NTHIPIV+GSQ RYE+T
Sbjct: 296 DVLYQLYSITGDSKYLLLAHLFDKPCFLGVLAIQADDISGFHANTHIPIVVGSQQRYEIT 355
Query: 367 GDQLHKE-----------GHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLK 415
GD LHKE H + GT++ F DPKR+A+ L + EESCTTYNMLK
Sbjct: 356 GDLLHKEISMFFMDIFNASHSYATGGTSVSEF--WQDPKRMATALQTENEESCTTYNMLK 413
Query: 416 VSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTP 475
VSR+LFRWTKE++YADYYER+LTNGVLGIQRGT+PG+MIY+LPL G SK +YH WGTP
Sbjct: 414 VSRNLFRWTKEVSYADYYERALTNGVLGIQRGTQPGLMIYMLPLGKGVSKAVTYHGWGTP 473
Query: 476 SDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVV 535
DSFWCCYGTGIESFSKLGDSIYF+E+G P +Y+ QYISS LDWKS + ++QKV+PVV
Sbjct: 474 YDSFWCCYGTGIESFSKLGDSIYFQEDGATPALYVTQYISSSLDWKSAGLSISQKVNPVV 533
Query: 536 SWDPYLRVTLTFSSKGSGLT--TSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTK 593
SWDPY+RVT T SS G+ ++LNLRIP WT+S GAK +LNG+ L +P+ GNFLS+ +
Sbjct: 534 SWDPYMRVTFTLSSSKVGVAKESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQ 593
Query: 594 TWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSD 653
W S D++T++LP+++RTEAI+DDRPEYAS+QAILYGPY+LAGH+ DW IT A
Sbjct: 594 KWKSGDQVTMELPMSIRTEAIKDDRPEYASLQAILYGPYLLAGHTSRDWSITTQAKP-GK 652
Query: 654 WITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSS 713
WITPIP + NS L+T +Q+ GN +V +NSNQ+ITM P+ GT A+ ATFRL+ D+S
Sbjct: 653 WITPIPETQNSYLVTLSQQSGNVSYVFSNSNQTITMRVSPEPGTQDAVAATFRLV-TDNS 711
Query: 714 GSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIA-QGSSVFHLVAGLDGG 772
S IG+ VMLEPFD PGM+V Q TD L V S + +G+S F LV+GLDG
Sbjct: 712 KPRISGPEGLIGRLVMLEPFDFPGMIVKQ-ATDSSLTVQASSPSDKGASSFRLVSGLDGK 770
Query: 773 DRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPIS 832
+VSL E+ KGCFVY+ L+ +L C S++T+ F AASF ++ G+ +Y+P+S
Sbjct: 771 LGSVSLRLESKKGCFVYSDQTLKQGTKLRLECGSDATDEKFKEAASFSLKTGMHQYNPMS 830
Query: 833 FVAKGANRNFLLAPLLSLRDESYTVYFDFQS 863
FV G RNF+L+PL SLRDE+Y VYF Q+
Sbjct: 831 FVMSGTQRNFVLSPLFSLRDETYNVYFSVQT 861
|
|
| TAIR|locus:2182295 AT5G12960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q2KGY9 MGCH7_ch7g196 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 863 | |||
| pfam07944 | 511 | pfam07944, DUF1680, Putative glycosyl hydrolase of | 1e-151 | |
| COG3533 | 589 | COG3533, COG3533, Uncharacterized protein conserve | 6e-60 |
| >gnl|CDD|219654 pfam07944, DUF1680, Putative glycosyl hydrolase of unknown function (DUF1680) | Back alignment and domain information |
|---|
Score = 452 bits (1165), Expect = e-151
Identities = 189/531 (35%), Positives = 269/531 (50%), Gaps = 37/531 (6%)
Query: 122 DVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEE--PSCELRG 179
DVRL +DS QQTN EYLL LD D+L+ FR A LP YGGWE+ P RG
Sbjct: 1 DVRL-TDSFWGDRQQTNREYLLPLDPDRLLHTFRLEAGLPNKAIAYGGWEDEFPGFPFRG 59
Query: 180 HFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALI 239
H +G +LSA A M AST + L++++ +V L+ Q+ G GYL +P FDR EA
Sbjct: 60 HDLGKWLSAVAYMLASTPDPELEKRLDRLVDELAEAQQ--GDGYLGTYPESNFDRNEAGN 117
Query: 240 PVWAP---YYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQ 296
WAP Y + K++AGL+ Y +AL + T + ++ Y+ V +V+ +++H
Sbjct: 118 GRWAPNHELYNLGKLIAGLVAYYQATGKRQALDVATRLADWLYD-VTSVLGDEQMQKHLY 176
Query: 297 TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIV 356
E GG+N+ L +L+ +T D ++L LA F L LA D + G H NT I
Sbjct: 177 P---EHGGINEALVELYELTGDKRYLDLAKRFIHNRGLDPLAYGQDHLPGRHQNTAIGHA 233
Query: 357 I-GSQMRYEVTGDQLHKE----------GHQLESSGTNIGHFNFKSDPKRLASNLDSNTE 405
+ G+ YE TGD + + +G N P L +
Sbjct: 234 VRGAADLYEETGDDALLKAAEFFWNNVVTRHMYVTGGNGSRHEHFGPPYDLPN--RLAYC 291
Query: 406 ESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSK 465
E+C +YNMLK++R + WT + YADYYER+L N +L Q + G+ Y PL G +
Sbjct: 292 ETCASYNMLKLTRRMLEWTPDAKYADYYERALYNHILAGQSP-DGGMFFYFNPLESGPKR 350
Query: 466 ERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQI 525
R + TP DS WCC G G E+ +K GD IY + G+Y+ YI S DWK
Sbjct: 351 LR--WGYSTPWDSCWCCPGNGAETHAKFGDYIYTHSD---DGLYVNLYIPSTADWKLKGG 405
Query: 526 VVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQ-DLPLPS 584
V + + WD +V LT + T L LRIP W + GA T+NG+ + P
Sbjct: 406 EVTLRQETNYPWDG--QVRLTVKTAKPAEFT-LYLRIPGWAA--GATLTVNGKPVVVQPK 460
Query: 585 PGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLA 635
+LS+T+ W D++ + LP+ +R EA P+ A+ A+L GP VL
Sbjct: 461 SDGYLSITREWKKGDRVELTLPMPVRLEAANPLVPDDANKVAVLRGPLVLC 511
|
The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. Length = 511 |
| >gnl|CDD|226063 COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 863 | |||
| PF07944 | 520 | DUF1680: Putative glycosyl hydrolase of unknown fu | 100.0 | |
| COG3533 | 589 | Uncharacterized protein conserved in bacteria [Fun | 100.0 | |
| PF05270 | 142 | AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP | 99.69 | |
| PF05270 | 142 | AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP | 99.32 | |
| cd00249 | 384 | AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d | 98.47 | |
| PF07470 | 336 | Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte | 97.81 | |
| cd00249 | 384 | AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d | 97.64 | |
| PF03663 | 370 | Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int | 97.64 | |
| PF07944 | 520 | DUF1680: Putative glycosyl hydrolase of unknown fu | 97.53 | |
| COG1331 | 667 | Highly conserved protein containing a thioredoxin | 97.37 | |
| PF03663 | 370 | Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int | 97.18 | |
| cd04791 | 321 | LanC_SerThrkinase Lanthionine synthetase C-like do | 97.03 | |
| COG1331 | 667 | Highly conserved protein containing a thioredoxin | 96.84 | |
| PF07221 | 346 | GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN | 96.58 | |
| COG4403 | 963 | LcnDR2 Lantibiotic modifying enzyme [Defense mecha | 96.25 | |
| PF06662 | 189 | C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I | 96.16 | |
| cd04792 | 825 | LanM-like LanM-like proteins. LanM is a bifunction | 96.05 | |
| PTZ00470 | 522 | glycoside hydrolase family 47 protein; Provisional | 95.72 | |
| PF07470 | 336 | Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte | 95.17 | |
| cd04791 | 321 | LanC_SerThrkinase Lanthionine synthetase C-like do | 95.16 | |
| PF07221 | 346 | GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN | 95.03 | |
| cd04434 | 343 | LanC_like LanC-like proteins. LanC is the cyclase | 94.77 | |
| PF01532 | 452 | Glyco_hydro_47: Glycosyl hydrolase family 47; Inte | 94.59 | |
| COG3533 | 589 | Uncharacterized protein conserved in bacteria [Fun | 94.47 | |
| COG4225 | 357 | Predicted unsaturated glucuronyl hydrolase involve | 94.41 | |
| cd04434 | 343 | LanC_like LanC-like proteins. LanC is the cyclase | 94.03 | |
| cd04792 | 825 | LanM-like LanM-like proteins. LanM is a bifunction | 93.94 | |
| COG4225 | 357 | Predicted unsaturated glucuronyl hydrolase involve | 93.25 | |
| cd04794 | 343 | euk_LANCL eukaryotic Lanthionine synthetase C-like | 92.51 | |
| PF06662 | 189 | C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I | 92.44 | |
| PTZ00470 | 522 | glycoside hydrolase family 47 protein; Provisional | 92.07 | |
| cd04794 | 343 | euk_LANCL eukaryotic Lanthionine synthetase C-like | 91.76 | |
| PF01532 | 452 | Glyco_hydro_47: Glycosyl hydrolase family 47; Inte | 91.35 | |
| COG2942 | 388 | N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra | 89.59 | |
| cd04793 | 382 | LanC LanC is the cyclase enzyme of the lanthionine | 88.89 | |
| KOG2431 | 546 | consensus 1, 2-alpha-mannosidase [Carbohydrate tra | 87.86 | |
| PF00759 | 444 | Glyco_hydro_9: Glycosyl hydrolase family 9; InterP | 87.79 | |
| KOG2787 | 403 | consensus Lanthionine synthetase C-like protein 1 | 87.72 | |
| COG2942 | 388 | N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra | 86.51 | |
| cd04793 | 382 | LanC LanC is the cyclase enzyme of the lanthionine | 84.98 | |
| KOG2244 | 786 | consensus Highly conserved protein containing a th | 84.32 | |
| PLN02266 | 510 | endoglucanase | 83.62 | |
| PLN02909 | 486 | Endoglucanase | 83.48 | |
| PLN02345 | 469 | endoglucanase | 83.29 | |
| KOG2429 | 622 | consensus Glycosyl hydrolase, family 47 [Carbohydr | 82.97 | |
| PLN00119 | 489 | endoglucanase | 81.83 | |
| PLN02613 | 498 | endoglucanase | 81.72 | |
| PLN02340 | 614 | endoglucanase | 81.63 | |
| PF05147 | 355 | LANC_like: Lanthionine synthetase C-like protein; | 80.69 | |
| PLN03009 | 495 | cellulase | 80.22 |
| >PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-105 Score=932.04 Aligned_cols=488 Identities=36% Similarity=0.638 Sum_probs=447.0
Q ss_pred CeEeCCCchhHHHHHHHHHHHHccCccchhHHHHHhcCCCCCCCCCCCCC--CCCcCccCcccchHHHHHHHHHHhcCcH
Q 002940 122 DVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWE--EPSCELRGHFVGHYLSASALMWASTHNE 199 (863)
Q Consensus 122 ~VrL~~~~~~~~~~~~~~~yLl~ld~drlL~~FR~~agL~~~g~~ygGWE--~~~~~l~Gh~~GhyLsala~~ya~TgD~ 199 (863)
+|||++ ++|+++|+++++|++.+++||||++||.+|||+.++.++|||| .++.+++||++||||||+|++|+.++|+
T Consensus 1 ~V~l~~-~~~~~~~~~~~~~~l~~~~d~ll~~~r~~agl~~~~~~~g~we~~~~~~~~~~~~~g~wl~a~a~~~~~~~D~ 79 (520)
T PF07944_consen 1 DVRLTD-GFWKRRQELNRAYLLPLDPDRLLYNFRSHAGLPNFAIAYGGWEGEFPGWWFRGHDVGKWLEAAAYAYAYTGDP 79 (520)
T ss_pred CeEECc-HHHHHHHHHHHHHHHHhHHHHHhhhcCcccCCCCccccCCCCccCCCCCccCCCcHHHHHHHHHHHHHHCCCH
Confidence 699996 8999999999999999999999999999999999999999999 8889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccc----hhhHHHHHHHHHHHHHHcCCHhHHHHHHHHH
Q 002940 200 SLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAP----YYTIHKILAGLLDQYTYADNAEALRMTTWMV 275 (863)
Q Consensus 200 ~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~p----yYt~HKI~aGLld~Y~~tGn~~AL~va~~~a 275 (863)
+|++|++++|+.|++||+ +||||+++++.. ..+.+..|+| +|+.|||+.||+|+|++|||+++|++++++|
T Consensus 80 ~l~~~~d~~V~~l~~~Q~--~dGYl~~~~~~~---~~~~~~~w~~~~he~Y~~~~ll~gl~~~y~~tG~~~~L~v~~k~a 154 (520)
T PF07944_consen 80 ELKAKADEIVDELAAAQQ--PDGYLGTYPEER---NFNPDDRWAPDMHELYCLGKLLEGLIDYYEATGNERALDVATKLA 154 (520)
T ss_pred HHHHHHHHHHHHHHHhcc--CCceeccccccc---ccccccCCCCCccceehHhHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence 999999999999999999 999999998743 1235678999 9999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccchhhhhhccccccccchHHHHHHHHHhcCCHHHHHHHhhcccccccch--hhccCCCCCCCcccCCC
Q 002940 276 EYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGL--LALQADDISGFHSNTHI 353 (863)
Q Consensus 276 d~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~~~~~~~--la~~~D~l~~~Hanthi 353 (863)
||+.++...+ ..+..+.++.+|+||||++|+|||++|||++||++|++|++..++++ +..+.|.+++.|+|+++
T Consensus 155 d~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LY~~Tgd~~yL~lA~~f~~~~~~~~~~~~~~~d~~~~~~a~~~~ 230 (520)
T PF07944_consen 155 DWVYRRLSRL----GPEPGQKMGYPEHGGINEALVRLYEITGDERYLDLAEYFVDQRGFDPYDLAYGQDHLPGRHANTHI 230 (520)
T ss_pred HHHHHHhccC----CHHHhhcccccccchHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCchhhcCccCCCcccccee
Confidence 9996655432 22334455668999999999999999999999999999999999888 88899999999999999
Q ss_pred Ceee-------hhhHHHHHhCCchhhc-----------cceeccccCCCC---CCCCcCCccccccCCCCCccchhHHHH
Q 002940 354 PIVI-------GSQMRYEVTGDQLHKE-----------GHQLESSGTNIG---HFNFKSDPKRLASNLDSNTEESCTTYN 412 (863)
Q Consensus 354 P~~~-------G~A~~Y~~TGD~~yl~-----------~h~y~tGG~s~~---E~~~f~~p~~l~~~l~~~~~EtCat~n 412 (863)
|.++ |++++|++|||++|++ +|+|+|||+|++ | +|++++.+++. ..++|||++||
T Consensus 231 ~h~vr~~y~~~g~a~~y~~tgd~~~~~a~~~~w~~v~~~~~y~tGg~g~~~~~E--~f~~~~~lp~~--~~~~EtCas~~ 306 (520)
T PF07944_consen 231 GHAVRAMYLYSGAADLYEETGDEEYLDAAENFWDNVVRHHMYATGGIGSDHEGE--HFGPPYDLPNR--LAYAETCASVN 306 (520)
T ss_pred eEEEEhhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHhcCeeccCCCcCCCCCc--cCCCCCCCCcC--CCCccccHHHH
Confidence 9998 9999999999999998 899999999999 9 99998887763 34599999999
Q ss_pred HHHHHHHhhcccccchHHHHHHHHHhhhcccccCCCCCCcEEEeccCCCCCCCccCcCCCCCCCCCcccCCCCccchhhh
Q 002940 413 MLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSK 492 (863)
Q Consensus 413 mlkl~~~L~~~tgD~~YaD~~ERalyN~iLa~q~~~~~g~~~Y~~PL~~g~~k~~~~~~~~t~~~~F~CC~gtg~e~~ak 492 (863)
||+++++||++|||++|+|+|||++||++||+|++ +++.++|++||+++..+... ..+.+++++||||+||++|+++|
T Consensus 307 ~~~~~~~L~~~tgd~~yaD~~Er~lyN~~la~~~~-d~~~~~Y~~pl~~~~~~~~~-~~~~~~~~~~~CC~~n~~r~~~~ 384 (520)
T PF07944_consen 307 MMKLARRLFRLTGDARYADYYERALYNALLAGQSP-DGGSFFYFNPLNSGPYKHRW-KNYRTPWFSFWCCPGNGARGWAK 384 (520)
T ss_pred HHHHHHHHHhcCCCchHHHHHHHHHhcccccccCC-CCCeeEEecCCccCcCcccc-ccccCCCCCCCCCcchHHHHHHH
Confidence 99999999999999999999999999999999997 89999999999887755221 25667888999999999999999
Q ss_pred cccceEEeecCCCCcEEEEEeeCcEEEeeeCc--eEEEEEECCCCCCCCCeEEEEEEEeCCCCeeeEEEEeccCCccCCC
Q 002940 493 LGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQ--IVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNG 570 (863)
Q Consensus 493 l~~~iY~~~~~~~~~LyVnLYipS~l~~~~~g--v~v~q~T~~~yp~~~~~~VtltV~~~~~~~~ftL~LRIP~Wa~~~~ 570 (863)
|+++||++++ ++||||||+||+++|+.++ |+|+|+|+ |||++ +|+|+|++. ++.+|+|+||||+||+ +
T Consensus 385 ~~~~iy~~~~---~~l~v~ly~~s~~~~~~~~~~v~i~q~T~--yP~~~--~v~i~v~~~-~~~~f~l~lRIP~Wa~--~ 454 (520)
T PF07944_consen 385 LPDYIYFRDD---DGLYVNLYIPSELTWPVGGGTVTITQETD--YPFEG--TVRITVSPD-KPVPFTLRLRIPSWAK--G 454 (520)
T ss_pred HhhhheEecC---CEEEEEEEcceEEEEEECCcEEEEEEecC--CCCCC--CEEEEEEcC-CCccEEEEEEccCCCC--C
Confidence 9999999986 6999999999999999988 77888877 89998 999999875 6889999999999998 7
Q ss_pred cEEEECCee-cCCCCCCCEEEEEeecCCCCEEEEEecceeEEEecCCCccccCCeEEEeecceeee
Q 002940 571 AKATLNGQD-LPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLA 635 (863)
Q Consensus 571 ~~v~VNG~~-~~~~~~ggy~~I~R~Wk~GD~I~L~LPm~lr~~~~~d~~~~~~~~vAv~rGPlVlA 635 (863)
++|+|||++ .....++||++|+|+|++||+|+|+|||++|++++++.+++.++.+||+|||||||
T Consensus 455 ~~i~vNG~~~~~~~~~~gy~~i~r~W~~gD~v~l~lpm~~r~~~~~~~~~~~~~~vAv~rGPlV~a 520 (520)
T PF07944_consen 455 ATIRVNGEPVVDTAVPGGYLTIEREWKDGDVVELRLPMEVRLEPANPRVPDDPGRVAVMRGPLVYA 520 (520)
T ss_pred cEEEECCEeCCCCcCCCCeEEEEeeccCCcEEEEEecCeeEEEeCCCCCccCCCeEEEEeCchhcC
Confidence 999999999 55567999999999999999999999999999999888888899999999999997
|
One member of this family is annotated as a possible arabinosidase, but no references were found to back this. |
| >COG3533 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins | Back alignment and domain information |
|---|
| >PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins | Back alignment and domain information |
|---|
| >cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid | Back alignment and domain information |
|---|
| >PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] | Back alignment and domain information |
|---|
| >cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid | Back alignment and domain information |
|---|
| >PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases | Back alignment and domain information |
|---|
| >COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 | Back alignment and domain information |
|---|
| >COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region | Back alignment and domain information |
|---|
| >cd04792 LanM-like LanM-like proteins | Back alignment and domain information |
|---|
| >PTZ00470 glycoside hydrolase family 47 protein; Provisional | Back alignment and domain information |
|---|
| >PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] | Back alignment and domain information |
|---|
| >cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases | Back alignment and domain information |
|---|
| >PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 | Back alignment and domain information |
|---|
| >cd04434 LanC_like LanC-like proteins | Back alignment and domain information |
|---|
| >PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG3533 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >cd04434 LanC_like LanC-like proteins | Back alignment and domain information |
|---|
| >cd04792 LanM-like LanM-like proteins | Back alignment and domain information |
|---|
| >COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] | Back alignment and domain information |
|---|
| >cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein | Back alignment and domain information |
|---|
| >PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region | Back alignment and domain information |
|---|
| >PTZ00470 glycoside hydrolase family 47 protein; Provisional | Back alignment and domain information |
|---|
| >cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein | Back alignment and domain information |
|---|
| >PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase | Back alignment and domain information |
|---|
| >KOG2431 consensus 1, 2-alpha-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] | Back alignment and domain information |
|---|
| >COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase | Back alignment and domain information |
|---|
| >KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02266 endoglucanase | Back alignment and domain information |
|---|
| >PLN02909 Endoglucanase | Back alignment and domain information |
|---|
| >PLN02345 endoglucanase | Back alignment and domain information |
|---|
| >KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN00119 endoglucanase | Back alignment and domain information |
|---|
| >PLN02613 endoglucanase | Back alignment and domain information |
|---|
| >PLN02340 endoglucanase | Back alignment and domain information |
|---|
| >PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others | Back alignment and domain information |
|---|
| >PLN03009 cellulase | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 863 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 3kmv_A | 157 | Alpha-L-arabinofuranosidase B; protein:carboydrate | 8e-06 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 2e-06
Identities = 75/515 (14%), Positives = 147/515 (28%), Gaps = 135/515 (26%)
Query: 399 NLDSNTEESCTTYN-MLKVSRHLFRWTKEIAYADYYERS-LTNGVLGIQRGTEPGVMIYL 456
++D T E Y +L V F + +S L+ + I +
Sbjct: 6 HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDH---------IIM 56
Query: 457 LPLAPGSSKERSYHHWGTPSDSFWCC--YGT-GIESFSKLGDSI---Y------FEEEGK 504
+ + FW ++ F + + + Y + E +
Sbjct: 57 SK----DAVSGTLR-------LFWTLLSKQEEMVQKF--VEEVLRINYKFLMSPIKTEQR 103
Query: 505 YPGVYIIQYISSRLD--WKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSL-NLR 561
P + YI R D + Q+ V PYL+ L +L LR
Sbjct: 104 QPSMMTRMYIEQR-DRLYNDNQVFAK---YNVSRLQPYLK-----------LRQALLELR 148
Query: 562 IPTWTSSNG---------AKATLNGQDLPLPSPGN-F-LSVTKTWSSDDKLTIQLPLTLR 610
+G A + F L++ S + L + L +
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208
Query: 611 TEAIQDDRPEYASIQAILYGPYVLAGHSIGDW--------DITESATSLSD-WITPIPAS 661
+ R +++S L HSI L + +
Sbjct: 209 IDPNWTSRSDHSS-------NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 662 YNSQ---LITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGS--- 715
+N L+T T+ T F+ + I+++ + T + + L+
Sbjct: 262 FNLSCKILLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 716 EFSSLNDF----IGKSV--MLEPFDSPGMLVIQHETDDELV-VTDSFIAQGSSVFHLVAG 768
E + N I +S+ L +D+ +H D+L + +S +
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDN-----WKHVNCDKLTTIIESSLNV---------- 365
Query: 769 LDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISEST-EAGFNNAASFVIEKGLSE 827
LE Y+ F +V S I + + + +++
Sbjct: 366 ---------LEPAEYRKMFDRLSV-FP--PSAH---IPTILLSLIWFDVIKSDVMVVVNK 410
Query: 828 YHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQ 862
H S V K + +S+ ++Y + +
Sbjct: 411 LHKYSLVEKQPKES-----TISI----PSIYLELK 436
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Length = 157 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 863 | |||
| 3kmv_A | 157 | Alpha-L-arabinofuranosidase B; protein:carboydrate | 99.83 | |
| 1wd3_A | 482 | Alpha-L-arabinofuranosidase B; beta-sandwich, beta | 99.81 | |
| 3kmv_A | 157 | Alpha-L-arabinofuranosidase B; protein:carboydrate | 99.68 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 99.31 | |
| 1wd3_A | 482 | Alpha-L-arabinofuranosidase B; beta-sandwich, beta | 99.21 | |
| 2ahf_A | 377 | Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba | 99.18 | |
| 2zzr_A | 397 | Unsaturated glucuronyl hydrolase; alpha barrel; 1. | 99.13 | |
| 3akh_A | 468 | Putative secreted alpha L-arabinofuranosidase II; | 99.12 | |
| 3pmm_A | 382 | Putative cytoplasmic protein; structural genomics, | 98.82 | |
| 3k11_A | 445 | Putative glycosyl hydrolase; structural genomics, | 98.69 | |
| 3k7x_A | 349 | LIN0763 protein; Q92DQ0, LKR23, NESG, structural g | 98.68 | |
| 2gz6_A | 388 | N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C | 98.53 | |
| 1nc5_A | 373 | Hypothetical protein YTER; structural genomics, he | 98.45 | |
| 3gt5_A | 402 | N-acetylglucosamine 2-epimerase; structural genomi | 98.16 | |
| 3k7x_A | 349 | LIN0763 protein; Q92DQ0, LKR23, NESG, structural g | 98.11 | |
| 2gz6_A | 388 | N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C | 97.92 | |
| 2zbl_A | 421 | Putative isomerase; N-acyl-D-glucosamine 2-epimera | 97.88 | |
| 3pmm_A | 382 | Putative cytoplasmic protein; structural genomics, | 97.84 | |
| 3gt5_A | 402 | N-acetylglucosamine 2-epimerase; structural genomi | 97.52 | |
| 1fp3_A | 402 | N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr | 97.45 | |
| 2zbl_A | 421 | Putative isomerase; N-acyl-D-glucosamine 2-epimera | 96.88 | |
| 1nc5_A | 373 | Hypothetical protein YTER; structural genomics, he | 96.85 | |
| 3k11_A | 445 | Putative glycosyl hydrolase; structural genomics, | 96.82 | |
| 1fp3_A | 402 | N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr | 96.66 | |
| 2zzr_A | 397 | Unsaturated glucuronyl hydrolase; alpha barrel; 1. | 96.52 | |
| 2ahf_A | 377 | Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba | 96.45 | |
| 3h7l_A | 586 | Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru | 96.18 | |
| 1nxc_A | 478 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; | 94.75 | |
| 3e6u_A | 411 | LANC-like protein 1; alpha barrel, cytoplasm, sign | 93.74 | |
| 1x9d_A | 538 | Endoplasmic reticulum mannosyl-oligosaccharide 1, | 92.75 | |
| 3e6u_A | 411 | LANC-like protein 1; alpha barrel, cytoplasm, sign | 92.49 | |
| 2ri9_A | 475 | Mannosyl-oligosaccharide alpha-1,2-mannosidase; al | 90.48 | |
| 1hcu_A | 503 | Alpha-1,2-mannosidase; glycosylation, glycosyl hyd | 89.29 | |
| 1ks8_A | 433 | Endo-B-1,4-glucanase; cellulase, endoglucanase, te | 88.12 | |
| 1dl2_A | 511 | Class I alpha-1,2-mannosidase; alpha-alpha helix b | 87.48 | |
| 1ut9_A | 609 | Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc | 87.31 | |
| 3gzk_A | 537 | Cellulase; fold from GH9 from CAZY database, glyco | 87.19 | |
| 1nxc_A | 478 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; | 86.84 | |
| 2g0d_A | 409 | Nisin biosynthesis protein NISC; alpha toroid, alp | 86.56 | |
| 2yik_A | 611 | Endoglucanase; hydrolase; 2.10A {Clostridium therm | 85.64 | |
| 1clc_A | 639 | Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos | 83.23 | |
| 1tf4_A | 605 | T. fusca endo/EXO-cellulase E4 catalytic domain an | 82.63 | |
| 2ri9_A | 475 | Mannosyl-oligosaccharide alpha-1,2-mannosidase; al | 82.57 | |
| 2g0d_A | 409 | Nisin biosynthesis protein NISC; alpha toroid, alp | 82.5 | |
| 2xfg_A | 466 | Endoglucanase 1; hydrolase-sugar binding protein c | 82.2 |
| >3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.7e-21 Score=186.83 Aligned_cols=112 Identities=21% Similarity=0.327 Sum_probs=100.9
Q ss_pred CCccccCCCCCCCceEEeecCCceEEEecCCCCCCCceEEEeeccCCCC-CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940 725 GKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGD-RTVSLESETYKGCFVYTAVNLQSSESTKLG 803 (863)
Q Consensus 725 g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpGl~g~~-g~vSles~~~pg~~~~~~~~~~~g~~~~l~ 803 (863)
++.|+|+++++|++||||++..+ ++++++...+|++|++||||++.+ |+|||||+++||+|||+. |..|+|+
T Consensus 8 ~~~vsl~S~n~p~~ylRh~~~~~--~~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~-----~~~l~L~ 80 (157)
T 3kmv_A 8 ITKAKFQSYNYPNMYIRHANFDA--RIDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHS-----NYDLSLE 80 (157)
T ss_dssp --CBEEEESSSTTCEEEEETTEE--EEESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEE-----TTEEEEE
T ss_pred CccEEEEecCCCCcEEEEeCCeE--EEccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEe-----CCEEEEe
Confidence 45899999999999999997765 667777788999999999998865 899999999999999996 8999999
Q ss_pred eecCCCccccccccceecccCCCccCCceEEEecCCCcchhc
Q 002940 804 CISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLA 845 (863)
Q Consensus 804 ~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~ 845 (863)
+ .++++.|+++|+|..++||++...+||++...++.||..
T Consensus 81 ~--~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh 120 (157)
T 3kmv_A 81 K--NDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRH 120 (157)
T ss_dssp E--CCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEE
T ss_pred c--cCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEE
Confidence 7 578889999999999999999999999999999999976
|
| >1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* | Back alignment and structure |
|---|
| >3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
| >1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* | Back alignment and structure |
|---|
| >2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A | Back alignment and structure |
|---|
| >2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* | Back alignment and structure |
|---|
| >3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* | Back alignment and structure |
|---|
| >3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A | Back alignment and structure |
|---|
| >3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} | Back alignment and structure |
|---|
| >2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} | Back alignment and structure |
|---|
| >1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* | Back alignment and structure |
|---|
| >3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} | Back alignment and structure |
|---|
| >3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} | Back alignment and structure |
|---|
| >2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} | Back alignment and structure |
|---|
| >2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* | Back alignment and structure |
|---|
| >3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A | Back alignment and structure |
|---|
| >3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} | Back alignment and structure |
|---|
| >1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 | Back alignment and structure |
|---|
| >2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* | Back alignment and structure |
|---|
| >1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* | Back alignment and structure |
|---|
| >3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
| >1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 | Back alignment and structure |
|---|
| >2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* | Back alignment and structure |
|---|
| >2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A | Back alignment and structure |
|---|
| >3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
| >1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 | Back alignment and structure |
|---|
| >3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* | Back alignment and structure |
|---|
| >1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A | Back alignment and structure |
|---|
| >3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* | Back alignment and structure |
|---|
| >2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* | Back alignment and structure |
|---|
| >1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 | Back alignment and structure |
|---|
| >1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A | Back alignment and structure |
|---|
| >1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* | Back alignment and structure |
|---|
| >1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* | Back alignment and structure |
|---|
| >3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* | Back alignment and structure |
|---|
| >1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 | Back alignment and structure |
|---|
| >2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A | Back alignment and structure |
|---|
| >2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} | Back alignment and structure |
|---|
| >1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 | Back alignment and structure |
|---|
| >1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* | Back alignment and structure |
|---|
| >2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* | Back alignment and structure |
|---|
| >2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A | Back alignment and structure |
|---|
| >2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 863 | |||
| d1wd3a2 | 162 | Alpha-L-arabinofuranosidase B (AbfB), C-terminal d | 99.65 | |
| d1wd3a2 | 162 | Alpha-L-arabinofuranosidase B (AbfB), C-terminal d | 99.33 | |
| d2d5ja1 | 377 | Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 | 98.96 | |
| d1nc5a_ | 363 | Hypothetical protein YteR {Bacillus subtilis [TaxI | 98.27 | |
| d2afaa1 | 411 | Putative NAG isomerase YihS {Salmonella typhimuriu | 97.08 | |
| d1nc5a_ | 363 | Hypothetical protein YteR {Bacillus subtilis [TaxI | 97.05 | |
| d2afaa1 | 411 | Putative NAG isomerase YihS {Salmonella typhimuriu | 96.55 | |
| d1fp3a_ | 402 | N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) | 95.68 | |
| d1nxca_ | 467 | Class I alpha-1;2-mannosidase, catalytic domain {M | 94.8 | |
| d2d5ja1 | 377 | Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 | 94.1 | |
| d1ut9a1 | 511 | Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu | 94.07 | |
| d1fp3a_ | 402 | N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) | 93.96 | |
| d1g87a1 | 454 | Endo/exocellulase:cellobiose E-4, N-terminal domai | 93.86 | |
| d1nxca_ | 467 | Class I alpha-1;2-mannosidase, catalytic domain {M | 93.63 | |
| d1dl2a_ | 511 | Class I alpha-1;2-mannosidase, catalytic domain {B | 93.05 | |
| d1tf4a1 | 460 | Endo/exocellulase:cellobiose E-4, N-terminal domai | 93.04 | |
| d1ia6a_ | 431 | Nonprocessive cellulase Cel9M {Clostridium cellulo | 92.64 | |
| d1x9da1 | 453 | Class I alpha-1;2-mannosidase, catalytic domain {H | 92.34 | |
| d1x9da1 | 453 | Class I alpha-1;2-mannosidase, catalytic domain {H | 92.04 | |
| d1ks8a_ | 433 | Endo-b-1,4-glucanase {Termite (Nasutitermes takasa | 91.71 | |
| d1clca1 | 441 | CelD cellulase, C-terminal domain {Clostridium the | 90.01 | |
| d1hcua_ | 488 | Class I alpha-1;2-mannosidase, catalytic domain {T | 89.87 | |
| d1dl2a_ | 511 | Class I alpha-1;2-mannosidase, catalytic domain {B | 88.89 | |
| d2ri9a1 | 475 | Class I alpha-1;2-mannosidase, catalytic domain {F | 87.57 |
| >d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: AbfB domain family: AbfB domain domain: Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain species: Aspergillus kawachii [TaxId: 40384]
Probab=99.65 E-value=1.4e-16 Score=154.45 Aligned_cols=117 Identities=15% Similarity=0.147 Sum_probs=97.1
Q ss_pred ccCCCCCcc--ccCCCCCCCceEEeecCCceEEEecCCC---CCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeecc
Q 002940 720 LNDFIGKSV--MLEPFDSPGMLVIQHETDDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNL 794 (863)
Q Consensus 720 p~~~~g~~v--~l~p~~~p~~~v~~~~~~~~l~v~~~~~---~~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~~~~ 794 (863)
|.-..|+.+ +++..+.|++||||++....|.+....+ ...|++|+|||||++ +|+|||||+++||.||||.
T Consensus 5 ~~l~~G~~~slr~~s~~y~~rylrH~~~~~~l~~v~~~s~~~~k~dasf~v~~Gl~~-~~~vSfES~n~Pg~yLRH~--- 80 (162)
T d1wd3a2 5 PSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-SQCFSFESVDTPGSYIRHY--- 80 (162)
T ss_dssp SCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-TTSEEEEESSSTTEEEEEE---
T ss_pred CccccCceEEEEEeCCCCCceEEEEcCCcEEEEeccCCcchhhcccceEEEccCcCC-CCeEEEEEcCCCCcEEEEE---
Confidence 334456644 6689999999999997777665432222 256899999999998 7999999999999999996
Q ss_pred CCCCcEEEEeecCCCccccccccceecccCCCccCCceEEEecCCCcchhc
Q 002940 795 QSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLA 845 (863)
Q Consensus 795 ~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~ 845 (863)
+..|+|. + +++++.|.++|||..++|| ....+||+...-+..||.+
T Consensus 81 --n~~l~L~-~-~d~s~~F~~DATF~~~~gl-~~~g~SfeS~n~p~~YlRH 126 (162)
T d1wd3a2 81 --NFELLLN-A-NDGTKQFHEDATFCPQAAL-NGEGTSLRSWSYPTRYFRH 126 (162)
T ss_dssp --TTEEEEE-E-CCCCHHHHHHTCEEEEECT-TSSSEEEEESSSTTCEEEE
T ss_pred --CCEEEEe-c-CCCccccccCceEEEeeCc-CCCceEEEEecCCCceEEe
Confidence 7899999 5 5888999999999999999 5578999999999888854
|
| >d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} | Back information, alignment and structure |
|---|
| >d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
| >d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} | Back information, alignment and structure |
|---|
| >d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} | Back information, alignment and structure |
|---|
| >d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
| >d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
| >d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} | Back information, alignment and structure |
|---|
| >d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
| >d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} | Back information, alignment and structure |
|---|