Citrus Sinensis ID: 002940


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860---
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKEGHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS
cccEEEEEHHHHHHHHHHHHHHcccccccccccccccccHHHHHccccccccEEEEccccccccccccHHHHcccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEcccccEEEccccHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccHHHcccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHccccccccHHccccccccccccccHHHHHHHHHHHHHHHccHHHHHcccccEEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccEEEEEEcccccEEEEEEccccEEEEEEccEEEEEEEcccccccccEEEEEEEEcccccEEEEEEEEcccccccccEEEEEccEEccccccccEEEEEEEEccccEEEEEEccEEEEEEccccccccccEEEEEEcccEEEcccccccccccccccccccccccccccccccEEEEEEcccEEEEEEcccccEEEEEEccccccccccEEEEEEccccccccccccccccccccccccccccccEEEEccccccEEEEcccccccccEEEEEccccccccEEEEEEcccccEEEEEEEcccccccEEEEEEEcccccccccccEEEEcccccccccccEEEccccccEEEccccccccccEEEEEEEcc
ccHHHHHHHHHHHHHHHHHHHHHHHccHccccccccccHHHHHHHHccccHHHHHHHHHHHcccccccHHHHHHHccHHHHcccccHHHHHHHHHHHHccccccccccccccccccEccHccEEEccccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccEEccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHccHHHHHHHHHcccHHHHcHHHHcccccccccccccccEEEEHHHHHEHcccHHHHccccEEEEccccccccccccccHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccEEccccccEEEccccccccccccccEEEEEcccccccEEEEEEEccEEEcccccEEEEEEEcccccccccEEEEEEEcccccccEEEEEEEcccccccccEEEEEccEEEcccccccEEEEEEEEccccEEEEEEcccEEEEEccccccccccEEEEEEccEEEEEcccccccccccccccccccccccccccccEEEccccccccEEEEccccccccEEEEcccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccEEEEEccccccccEEEEEEccccccEEEEEcccccccEEEEEccccccHHHHHHHHHHHHcccccccccEEEEEccccccEccccHHccccccEEEEEEccc
mkkwmcsiGFFKFLLTFLLIVSAAQAKECtnaypelashTFRSNLLSSKNESYIKQIHshndhltpsddsawlslmprkiLREEEQDELFSWAMLYRKIknpgqfkvpersgeflkevslhdvrlgsdsmHWRAQQTNLEYLLMLDVDKLVWNFRktarlpapgepyggweepscelrghfVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEigsgylsafpteQFDRLEalipvwapyyTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLahlfdkpcfLGLLAlqaddisgfhsnthipivigsqmryevtgdqlhkeghqlessgtnighfnfksdpkrlasnldsnteescTTYNMLKVSRHLFRWTKEIAYADYYErsltngvlgiqrgtepgvmiyllplapgsskersyhhwgtpsdsfwccygtgiesfsklgdsiyfeeegkypgVYIIQYISSrldwksgqivvnqkvdpvvswdpylrVTLTfsskgsglttslnlriptwtssngakatlngqdlplpspgnflsvtktwssddkltiqlpltlrteaiqddrpeyaSIQAILYgpyvlaghsigdwditesatslsdwitpipasynsqLITFTQeygntkfvltnsnqsitmekfpksgtdAALHATFRLILndssgsefsslndfigksvmlepfdspgmlviqhetddelvvtdsfiaqgsSVFHLVAGldggdrtvslesetykGCFVYTAVnlqssestklgcisesteagfnNAASFVIEkglseyhpisfvakganrnFLLApllslrdesytvyfdfqs
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTArlpapgepygGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKEGHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKvdpvvswdpYLRVTLtfsskgsglttslNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPllslrdesyTVYFDFQS
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKEGHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS
***WMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFR****************************AWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTG****************************************CTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGS**ERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWT********************NFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITM*******TDAALHATFRLILNDS***EFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDF**
*****CSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRK****************LKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKEGHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDS****************MLEPFDSPGMLVIQHETD*****************HLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS
MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKEGHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAP*********HWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS
*KKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQ*K****SGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKEGHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKKWMCSIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKEGHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSDWITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query863
224053368858 predicted protein [Populus trichocarpa] 0.972 0.977 0.688 0.0
225435510864 PREDICTED: uncharacterized protein LOC10 0.971 0.969 0.675 0.0
224075776858 predicted protein [Populus trichocarpa] 0.964 0.969 0.680 0.0
359478753874 PREDICTED: uncharacterized protein LOC10 0.966 0.954 0.664 0.0
449448754868 PREDICTED: uncharacterized protein LOC10 0.958 0.952 0.645 0.0
356541181854 PREDICTED: uncharacterized protein LOC10 0.967 0.977 0.636 0.0
356541912854 PREDICTED: uncharacterized protein LOC10 0.965 0.975 0.639 0.0
15239944861 uncharacterized protein [Arabidopsis tha 0.975 0.977 0.611 0.0
297807309860 hypothetical protein ARALYDRAFT_350453 [ 0.968 0.972 0.607 0.0
356557388841 PREDICTED: uncharacterized protein LOC10 0.952 0.977 0.620 0.0
>gi|224053368|ref|XP_002297785.1| predicted protein [Populus trichocarpa] gi|222845043|gb|EEE82590.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1233 bits (3190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 594/863 (68%), Positives = 708/863 (82%), Gaps = 24/863 (2%)

Query: 14  LLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTPSDDSAWL 73
           L+   ++     +KECTN   +L+SHTFR  LLSS+NE++ +++ +H  HLTP+DDSAW 
Sbjct: 7   LVVLSMLCGFGTSKECTNTPTQLSSHTFRYALLSSENETWKEEMFAHY-HLTPTDDSAWA 65

Query: 74  SLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLGSDSMHWR 133
           +L+PRKILREE++   +SWAM+YR +K+P      + SG FLKEVSLH+VRL   S+HW+
Sbjct: 66  NLLPRKILREEDE---YSWAMMYRNLKSP-----LKSSGNFLKEVSLHNVRLDPSSIHWQ 117

Query: 134 AQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYLSASALMW 193
           AQQTNLEYLLMLDVD LVW+FRKTA L  PG  YGGWE P+CELRGHFVGHYLSASA MW
Sbjct: 118 AQQTNLEYLLMLDVDSLVWSFRKTAGLSTPGTAYGGWEAPNCELRGHFVGHYLSASAQMW 177

Query: 194 ASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYYTIHKILA 253
           ASTHN+ L+++MSAVVSALS+CQ+++GSGYLSAFP+E FDR EA+ PVWAPYYTIHKILA
Sbjct: 178 ASTHNDILEKQMSAVVSALSSCQEKMGSGYLSAFPSELFDRFEAIKPVWAPYYTIHKILA 237

Query: 254 GLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLF 313
           GLLDQYT+ADNA+AL+M  WMV+YFYNRV+NVI  +S+ERH+Q+LNEE GGMNDVLYKLF
Sbjct: 238 GLLDQYTFADNAQALKMVKWMVDYFYNRVRNVITNFSVERHYQSLNEETGGMNDVLYKLF 297

Query: 314 CITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVTGDQLHKE 373
            IT DPKHL+LAHLFDKPCFLGLLA+QA+DISGFH+NTHIPIVIG+QMRYE+TGD L+K+
Sbjct: 298 SITGDPKHLVLAHLFDKPCFLGLLAVQAEDISGFHANTHIPIVIGAQMRYEITGDPLYKD 357

Query: 374 -----------GHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLKVSRHLFR 422
                       H   + GT++    F SDPKRLAS L +  EESCTTYNMLKVSRHLFR
Sbjct: 358 IGTFFMDIVNSSHSYATGGTSVSE--FWSDPKRLASTLQTENEESCTTYNMLKVSRHLFR 415

Query: 423 WTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCC 482
           WTKE+AYADYYER+LTNGVLGIQRGTEPGVMIY+LP  PGSSK +SYH WGT  D+FWCC
Sbjct: 416 WTKEMAYADYYERALTNGVLGIQRGTEPGVMIYMLPQHPGSSKGKSYHGWGTLYDTFWCC 475

Query: 483 YGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVVSWDPYLR 542
           YGTGIESFSKLGDSIYFEEEG+ PG+YIIQYISS LDWKSGQI++NQKVDPVVS DPYLR
Sbjct: 476 YGTGIESFSKLGDSIYFEEEGEAPGLYIIQYISSSLDWKSGQIMINQKVDPVVSSDPYLR 535

Query: 543 VTLTFS-SKGSGLTTSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTKTWSSDDKL 601
           VT TFS +KGS   ++LNLRIP WT  +GA AT+N Q L +P+PG+FLSV + WSS DKL
Sbjct: 536 VTFTFSPNKGSSQASTLNLRIPVWTHLDGATATINSQSLAIPAPGSFLSVNRKWSSGDKL 595

Query: 602 TIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITE-SATSLSDWITPIPA 660
           ++QLP++LRTEAIQDDR +YASIQAILYGPY+LAGH+ GDW++   SA SLSD ITPIPA
Sbjct: 596 SLQLPISLRTEAIQDDRHQYASIQAILYGPYLLAGHTSGDWNLKAGSAGSLSDSITPIPA 655

Query: 661 SYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGSEFSSL 720
           SYN QL++F+Q+ GN+ FVLTNSNQSITME+ PKSGTDA L ATFR++ NDSS SE   +
Sbjct: 656 SYNEQLVSFSQDSGNSTFVLTNSNQSITMEEHPKSGTDACLQATFRIVFNDSSSSEVLGI 715

Query: 721 NDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGDRTVSLES 780
           ND I KSVMLEPFD PGML++Q   D  L VT+S    GSS+FH+V GLDG D TVSLES
Sbjct: 716 NDVIDKSVMLEPFDLPGMLLVQQGKDSSLAVTNSAADDGSSIFHVVLGLDGKDGTVSLES 775

Query: 781 ETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANR 840
            + +GC++Y+ VN +S +S KL C   S++ GFN  ASFV+ KGLSEYHPISFVA+G  R
Sbjct: 776 GSQEGCYIYSGVNYKSGQSMKLSCKLGSSDPGFNQGASFVMNKGLSEYHPISFVAEGDKR 835

Query: 841 NFLLAPLLSLRDESYTVYFDFQS 863
           NFLLAPL SLRDE YT+YF+ Q+
Sbjct: 836 NFLLAPLHSLRDEFYTIYFNIQA 858




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435510|ref|XP_002285548.1| PREDICTED: uncharacterized protein LOC100246702 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224075776|ref|XP_002304762.1| predicted protein [Populus trichocarpa] gi|222842194|gb|EEE79741.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359478753|ref|XP_002283032.2| PREDICTED: uncharacterized protein LOC100250068 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449448754|ref|XP_004142130.1| PREDICTED: uncharacterized protein LOC101207833 [Cucumis sativus] Back     alignment and taxonomy information
>gi|356541181|ref|XP_003539059.1| PREDICTED: uncharacterized protein LOC100781521 [Glycine max] Back     alignment and taxonomy information
>gi|356541912|ref|XP_003539416.1| PREDICTED: uncharacterized protein LOC100783150 [Glycine max] Back     alignment and taxonomy information
>gi|15239944|ref|NP_196799.1| uncharacterized protein [Arabidopsis thaliana] gi|7630051|emb|CAB88259.1| putative protein [Arabidopsis thaliana] gi|26451123|dbj|BAC42665.1| unknown protein [Arabidopsis thaliana] gi|332004451|gb|AED91834.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297807309|ref|XP_002871538.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] gi|297317375|gb|EFH47797.1| hypothetical protein ARALYDRAFT_350453 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356557388|ref|XP_003546998.1| PREDICTED: uncharacterized protein LOC100815634 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query863
TAIR|locus:2182280861 AT5G12950 [Arabidopsis thalian 0.973 0.975 0.615 1.9e-289
TAIR|locus:2182295865 AT5G12960 [Arabidopsis thalian 0.968 0.966 0.612 6.8e-285
UNIPROTKB|Q2KGY9633 MGCH7_ch7g196 "Putative unchar 0.565 0.770 0.312 2.2e-50
TAIR|locus:2182280 AT5G12950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2780 (983.7 bits), Expect = 1.9e-289, P = 1.9e-289
 Identities = 536/871 (61%), Positives = 661/871 (75%)

Query:     7 SIGFFKFLLTFLLIVSAAQAKECTNAYPELASHTFRSNLLSSKNESYIKQIHSHNDHLTP 66
             +I    +  +F+L+   + AKECTN   +L+SHTFRS LL SKNE+   ++ SH  HLTP
Sbjct:     8 TIALLLYTSSFVLV---SVAKECTNTPTQLSSHTFRSELLQSKNETLKTELFSHY-HLTP 63

Query:    67 SDDSAWLSLMPRKILREEEQDELFSWAMLYRKIKNPGQFKVPERSGEFLKEVSLHDVRLG 126
             +DDSAW SL+PRK+L+EE  DE F+W MLYRK      FK    SG FLK+VSLHDVRL 
Sbjct:    64 ADDSAWSSLLPRKMLKEEA-DE-FAWTMLYRK------FKDSNSSGNFLKDVSLHDVRLD 115

Query:   127 SDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEEPSCELRGHFVGHYL 186
              DS HWRAQQTNLEYLLMLDVD L W+FRK A L APG+ YGGWE P  ELRGHFVGHYL
Sbjct:   116 PDSFHWRAQQTNLEYLLMLDVDGLAWSFRKEAGLDAPGDYYGGWERPDSELRGHFVGHYL 175

Query:   187 SASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAPYY 246
             SA+A MWASTHN++LKEKMSA+VSALS CQ++ G+GYLSAFP+  FDR EA+ PVWAPYY
Sbjct:   176 SATAYMWASTHNDTLKEKMSALVSALSECQQKSGTGYLSAFPSSFFDRFEAITPVWAPYY 235

Query:   247 TIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQTLNEEAGGMN 306
             TIHKILAGL+DQY  A N++AL+M T M +YFY RV+NVI+KYS+ERHWQ+LNEE GGMN
Sbjct:   236 TIHKILAGLVDQYKLAGNSQALKMATGMADYFYGRVRNVIRKYSVERHWQSLNEETGGMN 295

Query:   307 DVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIVIGSQMRYEVT 366
             DVLY+L+ IT D K+L+LAHLFDKPCFLG+LA+QADDISGFH+NTHIPIV+GSQ RYE+T
Sbjct:   296 DVLYQLYSITGDSKYLLLAHLFDKPCFLGVLAIQADDISGFHANTHIPIVVGSQQRYEIT 355

Query:   367 GDQLHKE-----------GHQLESSGTNIGHFNFKSDPKRLASNLDSNTEESCTTYNMLK 415
             GD LHKE            H   + GT++  F    DPKR+A+ L +  EESCTTYNMLK
Sbjct:   356 GDLLHKEISMFFMDIFNASHSYATGGTSVSEF--WQDPKRMATALQTENEESCTTYNMLK 413

Query:   416 VSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTP 475
             VSR+LFRWTKE++YADYYER+LTNGVLGIQRGT+PG+MIY+LPL  G SK  +YH WGTP
Sbjct:   414 VSRNLFRWTKEVSYADYYERALTNGVLGIQRGTQPGLMIYMLPLGKGVSKAVTYHGWGTP 473

Query:   476 SDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQIVVNQKVDPVV 535
              DSFWCCYGTGIESFSKLGDSIYF+E+G  P +Y+ QYISS LDWKS  + ++QKV+PVV
Sbjct:   474 YDSFWCCYGTGIESFSKLGDSIYFQEDGATPALYVTQYISSSLDWKSAGLSISQKVNPVV 533

Query:   536 SWDPYLRVTLTFSSKGSGLT--TSLNLRIPTWTSSNGAKATLNGQDLPLPSPGNFLSVTK 593
             SWDPY+RVT T SS   G+   ++LNLRIP WT+S GAK +LNG+ L +P+ GNFLS+ +
Sbjct:   534 SWDPYMRVTFTLSSSKVGVAKESTLNLRIPVWTNSIGAKVSLNGRPLNVPTSGNFLSIKQ 593

Query:   594 TWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLAGHSIGDWDITESATSLSD 653
              W S D++T++LP+++RTEAI+DDRPEYAS+QAILYGPY+LAGH+  DW IT  A     
Sbjct:   594 KWKSGDQVTMELPMSIRTEAIKDDRPEYASLQAILYGPYLLAGHTSRDWSITTQAKP-GK 652

Query:   654 WITPIPASYNSQLITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSS 713
             WITPIP + NS L+T +Q+ GN  +V +NSNQ+ITM   P+ GT  A+ ATFRL+  D+S
Sbjct:   653 WITPIPETQNSYLVTLSQQSGNVSYVFSNSNQTITMRVSPEPGTQDAVAATFRLV-TDNS 711

Query:   714 GSEFSSLNDFIGKSVMLEPFDSPGMLVIQHETDDELVVTDSFIA-QGSSVFHLVAGLDGG 772
                 S     IG+ VMLEPFD PGM+V Q  TD  L V  S  + +G+S F LV+GLDG 
Sbjct:   712 KPRISGPEGLIGRLVMLEPFDFPGMIVKQ-ATDSSLTVQASSPSDKGASSFRLVSGLDGK 770

Query:   773 DRTVSLESETYKGCFVYTAVNLQSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPIS 832
               +VSL  E+ KGCFVY+   L+     +L C S++T+  F  AASF ++ G+ +Y+P+S
Sbjct:   771 LGSVSLRLESKKGCFVYSDQTLKQGTKLRLECGSDATDEKFKEAASFSLKTGMHQYNPMS 830

Query:   833 FVAKGANRNFLLAPLLSLRDESYTVYFDFQS 863
             FV  G  RNF+L+PL SLRDE+Y VYF  Q+
Sbjct:   831 FVMSGTQRNFVLSPLFSLRDETYNVYFSVQT 861




GO:0003824 "catalytic activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0005773 "vacuole" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
TAIR|locus:2182295 AT5G12960 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2KGY9 MGCH7_ch7g196 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query863
pfam07944511 pfam07944, DUF1680, Putative glycosyl hydrolase of 1e-151
COG3533589 COG3533, COG3533, Uncharacterized protein conserve 6e-60
>gnl|CDD|219654 pfam07944, DUF1680, Putative glycosyl hydrolase of unknown function (DUF1680) Back     alignment and domain information
 Score =  452 bits (1165), Expect = e-151
 Identities = 189/531 (35%), Positives = 269/531 (50%), Gaps = 37/531 (6%)

Query: 122 DVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWEE--PSCELRG 179
           DVRL +DS     QQTN EYLL LD D+L+  FR  A LP     YGGWE+  P    RG
Sbjct: 1   DVRL-TDSFWGDRQQTNREYLLPLDPDRLLHTFRLEAGLPNKAIAYGGWEDEFPGFPFRG 59

Query: 180 HFVGHYLSASALMWASTHNESLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALI 239
           H +G +LSA A M AST +  L++++  +V  L+  Q+  G GYL  +P   FDR EA  
Sbjct: 60  HDLGKWLSAVAYMLASTPDPELEKRLDRLVDELAEAQQ--GDGYLGTYPESNFDRNEAGN 117

Query: 240 PVWAP---YYTIHKILAGLLDQYTYADNAEALRMTTWMVEYFYNRVQNVIKKYSIERHWQ 296
             WAP    Y + K++AGL+  Y      +AL + T + ++ Y+ V +V+    +++H  
Sbjct: 118 GRWAPNHELYNLGKLIAGLVAYYQATGKRQALDVATRLADWLYD-VTSVLGDEQMQKHLY 176

Query: 297 TLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGLLALQADDISGFHSNTHIPIV 356
               E GG+N+ L +L+ +T D ++L LA  F     L  LA   D + G H NT I   
Sbjct: 177 P---EHGGINEALVELYELTGDKRYLDLAKRFIHNRGLDPLAYGQDHLPGRHQNTAIGHA 233

Query: 357 I-GSQMRYEVTGDQLHKE----------GHQLESSGTNIGHFNFKSDPKRLASNLDSNTE 405
           + G+   YE TGD    +             +  +G N         P  L +       
Sbjct: 234 VRGAADLYEETGDDALLKAAEFFWNNVVTRHMYVTGGNGSRHEHFGPPYDLPN--RLAYC 291

Query: 406 ESCTTYNMLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSK 465
           E+C +YNMLK++R +  WT +  YADYYER+L N +L  Q   + G+  Y  PL  G  +
Sbjct: 292 ETCASYNMLKLTRRMLEWTPDAKYADYYERALYNHILAGQSP-DGGMFFYFNPLESGPKR 350

Query: 466 ERSYHHWGTPSDSFWCCYGTGIESFSKLGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQI 525
            R    + TP DS WCC G G E+ +K GD IY   +    G+Y+  YI S  DWK    
Sbjct: 351 LR--WGYSTPWDSCWCCPGNGAETHAKFGDYIYTHSD---DGLYVNLYIPSTADWKLKGG 405

Query: 526 VVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNGAKATLNGQ-DLPLPS 584
            V  + +    WD   +V LT  +      T L LRIP W +  GA  T+NG+  +  P 
Sbjct: 406 EVTLRQETNYPWDG--QVRLTVKTAKPAEFT-LYLRIPGWAA--GATLTVNGKPVVVQPK 460

Query: 585 PGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLA 635
              +LS+T+ W   D++ + LP+ +R EA     P+ A+  A+L GP VL 
Sbjct: 461 SDGYLSITREWKKGDRVELTLPMPVRLEAANPLVPDDANKVAVLRGPLVLC 511


The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. Length = 511

>gnl|CDD|226063 COG3533, COG3533, Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 863
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 100.0
COG3533589 Uncharacterized protein conserved in bacteria [Fun 100.0
PF05270142 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP 99.69
PF05270142 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterP 99.32
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 98.47
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 97.81
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.64
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.64
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 97.53
COG1331667 Highly conserved protein containing a thioredoxin 97.37
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 97.18
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 97.03
COG1331667 Highly conserved protein containing a thioredoxin 96.84
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 96.58
COG4403963 LcnDR2 Lantibiotic modifying enzyme [Defense mecha 96.25
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 96.16
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 96.05
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 95.72
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 95.17
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 95.16
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 95.03
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 94.77
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 94.59
COG3533589 Uncharacterized protein conserved in bacteria [Fun 94.47
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 94.41
cd04434343 LanC_like LanC-like proteins. LanC is the cyclase 94.03
cd04792825 LanM-like LanM-like proteins. LanM is a bifunction 93.94
COG4225357 Predicted unsaturated glucuronyl hydrolase involve 93.25
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 92.51
PF06662189 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; I 92.44
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 92.07
cd04794343 euk_LANCL eukaryotic Lanthionine synthetase C-like 91.76
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 91.35
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 89.59
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 88.89
KOG2431546 consensus 1, 2-alpha-mannosidase [Carbohydrate tra 87.86
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 87.79
KOG2787403 consensus Lanthionine synthetase C-like protein 1 87.72
COG2942388 N-acyl-D-glucosamine 2-epimerase [Carbohydrate tra 86.51
cd04793382 LanC LanC is the cyclase enzyme of the lanthionine 84.98
KOG2244786 consensus Highly conserved protein containing a th 84.32
PLN02266510 endoglucanase 83.62
PLN02909486 Endoglucanase 83.48
PLN02345469 endoglucanase 83.29
KOG2429622 consensus Glycosyl hydrolase, family 47 [Carbohydr 82.97
PLN00119489 endoglucanase 81.83
PLN02613498 endoglucanase 81.72
PLN02340614 endoglucanase 81.63
PF05147355 LANC_like: Lanthionine synthetase C-like protein; 80.69
PLN03009495 cellulase 80.22
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
Probab=100.00  E-value=1.8e-105  Score=932.04  Aligned_cols=488  Identities=36%  Similarity=0.638  Sum_probs=447.0

Q ss_pred             CeEeCCCchhHHHHHHHHHHHHccCccchhHHHHHhcCCCCCCCCCCCCC--CCCcCccCcccchHHHHHHHHHHhcCcH
Q 002940          122 DVRLGSDSMHWRAQQTNLEYLLMLDVDKLVWNFRKTARLPAPGEPYGGWE--EPSCELRGHFVGHYLSASALMWASTHNE  199 (863)
Q Consensus       122 ~VrL~~~~~~~~~~~~~~~yLl~ld~drlL~~FR~~agL~~~g~~ygGWE--~~~~~l~Gh~~GhyLsala~~ya~TgD~  199 (863)
                      +|||++ ++|+++|+++++|++.+++||||++||.+|||+.++.++||||  .++.+++||++||||||+|++|+.++|+
T Consensus         1 ~V~l~~-~~~~~~~~~~~~~~l~~~~d~ll~~~r~~agl~~~~~~~g~we~~~~~~~~~~~~~g~wl~a~a~~~~~~~D~   79 (520)
T PF07944_consen    1 DVRLTD-GFWKRRQELNRAYLLPLDPDRLLYNFRSHAGLPNFAIAYGGWEGEFPGWWFRGHDVGKWLEAAAYAYAYTGDP   79 (520)
T ss_pred             CeEECc-HHHHHHHHHHHHHHHHhHHHHHhhhcCcccCCCCccccCCCCccCCCCCccCCCcHHHHHHHHHHHHHHCCCH
Confidence            699996 8999999999999999999999999999999999999999999  8889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCcccccCCchhhhhhhhcCCCccc----hhhHHHHHHHHHHHHHHcCCHhHHHHHHHHH
Q 002940          200 SLKEKMSAVVSALSACQKEIGSGYLSAFPTEQFDRLEALIPVWAP----YYTIHKILAGLLDQYTYADNAEALRMTTWMV  275 (863)
Q Consensus       200 ~lk~k~~~~Vd~L~~~Q~~~~dGYlga~p~~~~~r~~~l~~~W~p----yYt~HKI~aGLld~Y~~tGn~~AL~va~~~a  275 (863)
                      +|++|++++|+.|++||+  +||||+++++..   ..+.+..|+|    +|+.|||+.||+|+|++|||+++|++++++|
T Consensus        80 ~l~~~~d~~V~~l~~~Q~--~dGYl~~~~~~~---~~~~~~~w~~~~he~Y~~~~ll~gl~~~y~~tG~~~~L~v~~k~a  154 (520)
T PF07944_consen   80 ELKAKADEIVDELAAAQQ--PDGYLGTYPEER---NFNPDDRWAPDMHELYCLGKLLEGLIDYYEATGNERALDVATKLA  154 (520)
T ss_pred             HHHHHHHHHHHHHHHhcc--CCceeccccccc---ccccccCCCCCccceehHhHHHHHHHHHHHHHCcHHHHHHHHHHH
Confidence            999999999999999999  999999998743   1235678999    9999999999999999999999999999999


Q ss_pred             HHHHHHhhhhhccchhhhhhccccccccchHHHHHHHHHhcCCHHHHHHHhhcccccccch--hhccCCCCCCCcccCCC
Q 002940          276 EYFYNRVQNVIKKYSIERHWQTLNEEAGGMNDVLYKLFCITQDPKHLMLAHLFDKPCFLGL--LALQADDISGFHSNTHI  353 (863)
Q Consensus       276 d~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~f~~~~~~~~--la~~~D~l~~~Hanthi  353 (863)
                      ||+.++...+    ..+..+.++.+|+||||++|+|||++|||++||++|++|++..++++  +..+.|.+++.|+|+++
T Consensus       155 d~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LY~~Tgd~~yL~lA~~f~~~~~~~~~~~~~~~d~~~~~~a~~~~  230 (520)
T PF07944_consen  155 DWVYRRLSRL----GPEPGQKMGYPEHGGINEALVRLYEITGDERYLDLAEYFVDQRGFDPYDLAYGQDHLPGRHANTHI  230 (520)
T ss_pred             HHHHHHhccC----CHHHhhcccccccchHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCchhhcCccCCCcccccee
Confidence            9996655432    22334455668999999999999999999999999999999999888  88899999999999999


Q ss_pred             Ceee-------hhhHHHHHhCCchhhc-----------cceeccccCCCC---CCCCcCCccccccCCCCCccchhHHHH
Q 002940          354 PIVI-------GSQMRYEVTGDQLHKE-----------GHQLESSGTNIG---HFNFKSDPKRLASNLDSNTEESCTTYN  412 (863)
Q Consensus       354 P~~~-------G~A~~Y~~TGD~~yl~-----------~h~y~tGG~s~~---E~~~f~~p~~l~~~l~~~~~EtCat~n  412 (863)
                      |.++       |++++|++|||++|++           +|+|+|||+|++   |  +|++++.+++.  ..++|||++||
T Consensus       231 ~h~vr~~y~~~g~a~~y~~tgd~~~~~a~~~~w~~v~~~~~y~tGg~g~~~~~E--~f~~~~~lp~~--~~~~EtCas~~  306 (520)
T PF07944_consen  231 GHAVRAMYLYSGAADLYEETGDEEYLDAAENFWDNVVRHHMYATGGIGSDHEGE--HFGPPYDLPNR--LAYAETCASVN  306 (520)
T ss_pred             eEEEEhhhhhhHHHHHHHHhCCHHHHHHHHHHHHHHHhcCeeccCCCcCCCCCc--cCCCCCCCCcC--CCCccccHHHH
Confidence            9998       9999999999999998           899999999999   9  99998887763  34599999999


Q ss_pred             HHHHHHHhhcccccchHHHHHHHHHhhhcccccCCCCCCcEEEeccCCCCCCCccCcCCCCCCCCCcccCCCCccchhhh
Q 002940          413 MLKVSRHLFRWTKEIAYADYYERSLTNGVLGIQRGTEPGVMIYLLPLAPGSSKERSYHHWGTPSDSFWCCYGTGIESFSK  492 (863)
Q Consensus       413 mlkl~~~L~~~tgD~~YaD~~ERalyN~iLa~q~~~~~g~~~Y~~PL~~g~~k~~~~~~~~t~~~~F~CC~gtg~e~~ak  492 (863)
                      ||+++++||++|||++|+|+|||++||++||+|++ +++.++|++||+++..+... ..+.+++++||||+||++|+++|
T Consensus       307 ~~~~~~~L~~~tgd~~yaD~~Er~lyN~~la~~~~-d~~~~~Y~~pl~~~~~~~~~-~~~~~~~~~~~CC~~n~~r~~~~  384 (520)
T PF07944_consen  307 MMKLARRLFRLTGDARYADYYERALYNALLAGQSP-DGGSFFYFNPLNSGPYKHRW-KNYRTPWFSFWCCPGNGARGWAK  384 (520)
T ss_pred             HHHHHHHHHhcCCCchHHHHHHHHHhcccccccCC-CCCeeEEecCCccCcCcccc-ccccCCCCCCCCCcchHHHHHHH
Confidence            99999999999999999999999999999999997 89999999999887755221 25667888999999999999999


Q ss_pred             cccceEEeecCCCCcEEEEEeeCcEEEeeeCc--eEEEEEECCCCCCCCCeEEEEEEEeCCCCeeeEEEEeccCCccCCC
Q 002940          493 LGDSIYFEEEGKYPGVYIIQYISSRLDWKSGQ--IVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSLNLRIPTWTSSNG  570 (863)
Q Consensus       493 l~~~iY~~~~~~~~~LyVnLYipS~l~~~~~g--v~v~q~T~~~yp~~~~~~VtltV~~~~~~~~ftL~LRIP~Wa~~~~  570 (863)
                      |+++||++++   ++||||||+||+++|+.++  |+|+|+|+  |||++  +|+|+|++. ++.+|+|+||||+||+  +
T Consensus       385 ~~~~iy~~~~---~~l~v~ly~~s~~~~~~~~~~v~i~q~T~--yP~~~--~v~i~v~~~-~~~~f~l~lRIP~Wa~--~  454 (520)
T PF07944_consen  385 LPDYIYFRDD---DGLYVNLYIPSELTWPVGGGTVTITQETD--YPFEG--TVRITVSPD-KPVPFTLRLRIPSWAK--G  454 (520)
T ss_pred             HhhhheEecC---CEEEEEEEcceEEEEEECCcEEEEEEecC--CCCCC--CEEEEEEcC-CCccEEEEEEccCCCC--C
Confidence            9999999986   6999999999999999988  77888877  89998  999999875 6889999999999998  7


Q ss_pred             cEEEECCee-cCCCCCCCEEEEEeecCCCCEEEEEecceeEEEecCCCccccCCeEEEeecceeee
Q 002940          571 AKATLNGQD-LPLPSPGNFLSVTKTWSSDDKLTIQLPLTLRTEAIQDDRPEYASIQAILYGPYVLA  635 (863)
Q Consensus       571 ~~v~VNG~~-~~~~~~ggy~~I~R~Wk~GD~I~L~LPm~lr~~~~~d~~~~~~~~vAv~rGPlVlA  635 (863)
                      ++|+|||++ .....++||++|+|+|++||+|+|+|||++|++++++.+++.++.+||+|||||||
T Consensus       455 ~~i~vNG~~~~~~~~~~gy~~i~r~W~~gD~v~l~lpm~~r~~~~~~~~~~~~~~vAv~rGPlV~a  520 (520)
T PF07944_consen  455 ATIRVNGEPVVDTAVPGGYLTIEREWKDGDVVELRLPMEVRLEPANPRVPDDPGRVAVMRGPLVYA  520 (520)
T ss_pred             cEEEECCEeCCCCcCCCCeEEEEeeccCCcEEEEEecCeeEEEeCCCCCccCCCeEEEEeCchhcC
Confidence            999999999 55567999999999999999999999999999999888888899999999999997



One member of this family is annotated as a possible arabinosidase, but no references were found to back this.

>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins Back     alignment and domain information
>PF05270 AbfB: Alpha-L-arabinofuranosidase B (ABFB); InterPro: IPR007934 This family consists of several fungal alpha-L-arabinofuranosidase B proteins Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms] Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>cd04434 LanC_like LanC-like proteins Back     alignment and domain information
>cd04792 LanM-like LanM-like proteins Back     alignment and domain information
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only] Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>KOG2431 consensus 1, 2-alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase Back     alignment and domain information
>KOG2244 consensus Highly conserved protein containing a thioredoxin domain [General function prediction only] Back     alignment and domain information
>PLN02266 endoglucanase Back     alignment and domain information
>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PF05147 LANC_like: Lanthionine synthetase C-like protein; InterPro: IPR007822 The LanC-like protein superfamily encompasses a highly divergent group of peptide-modifying enzymes, including the eukaryotic and bacterial lanthionine synthetase C-like proteins (LanC) [, , ]; subtilin biosynthesis protein SpaC from Bacillus subtilis [, ]; epidermin biosynthesis protein EpiC from Staphylococcus epidermidis []; nisin biosynthesis protein NisC from Lactococcus lactis [, , ]; GCR2 from Arabidopsis thaliana []; and many others Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query863
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 8e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 51.0 bits (121), Expect = 2e-06
 Identities = 75/515 (14%), Positives = 147/515 (28%), Gaps = 135/515 (26%)

Query: 399 NLDSNTEESCTTYN-MLKVSRHLFRWTKEIAYADYYERS-LTNGVLGIQRGTEPGVMIYL 456
           ++D  T E    Y  +L V    F    +        +S L+   +           I +
Sbjct: 6   HMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDH---------IIM 56

Query: 457 LPLAPGSSKERSYHHWGTPSDSFWCC--YGT-GIESFSKLGDSI---Y------FEEEGK 504
                  +   +          FW         ++ F  + + +   Y       + E +
Sbjct: 57  SK----DAVSGTLR-------LFWTLLSKQEEMVQKF--VEEVLRINYKFLMSPIKTEQR 103

Query: 505 YPGVYIIQYISSRLD--WKSGQIVVNQKVDPVVSWDPYLRVTLTFSSKGSGLTTSL-NLR 561
            P +    YI  R D  +   Q+        V    PYL+           L  +L  LR
Sbjct: 104 QPSMMTRMYIEQR-DRLYNDNQVFAK---YNVSRLQPYLK-----------LRQALLELR 148

Query: 562 IPTWTSSNG---------AKATLNGQDLPLPSPGN-F-LSVTKTWSSDDKLTIQLPLTLR 610
                  +G         A        +        F L++    S +  L +   L  +
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208

Query: 611 TEAIQDDRPEYASIQAILYGPYVLAGHSIGDW--------DITESATSLSD-WITPIPAS 661
            +     R +++S          L  HSI                   L +        +
Sbjct: 209 IDPNWTSRSDHSS-------NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261

Query: 662 YNSQ---LITFTQEYGNTKFVLTNSNQSITMEKFPKSGTDAALHATFRLILNDSSGS--- 715
           +N     L+T T+    T F+   +   I+++    + T   + +     L+        
Sbjct: 262 FNLSCKILLT-TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320

Query: 716 EFSSLNDF----IGKSV--MLEPFDSPGMLVIQHETDDELV-VTDSFIAQGSSVFHLVAG 768
           E  + N      I +S+   L  +D+      +H   D+L  + +S +            
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDN-----WKHVNCDKLTTIIESSLNV---------- 365

Query: 769 LDGGDRTVSLESETYKGCFVYTAVNLQSSESTKLGCISEST-EAGFNNAASFVIEKGLSE 827
                    LE   Y+  F   +V      S     I        + +     +   +++
Sbjct: 366 ---------LEPAEYRKMFDRLSV-FP--PSAH---IPTILLSLIWFDVIKSDVMVVVNK 410

Query: 828 YHPISFVAKGANRNFLLAPLLSLRDESYTVYFDFQ 862
            H  S V K    +      +S+     ++Y + +
Sbjct: 411 LHKYSLVEKQPKES-----TISI----PSIYLELK 436


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Length = 157 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query863
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 99.83
1wd3_A482 Alpha-L-arabinofuranosidase B; beta-sandwich, beta 99.81
3kmv_A157 Alpha-L-arabinofuranosidase B; protein:carboydrate 99.68
3akh_A468 Putative secreted alpha L-arabinofuranosidase II; 99.31
1wd3_A482 Alpha-L-arabinofuranosidase B; beta-sandwich, beta 99.21
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 99.18
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 99.13
3akh_A468 Putative secreted alpha L-arabinofuranosidase II; 99.12
3pmm_A382 Putative cytoplasmic protein; structural genomics, 98.82
3k11_A445 Putative glycosyl hydrolase; structural genomics, 98.69
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.68
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 98.53
1nc5_A373 Hypothetical protein YTER; structural genomics, he 98.45
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 98.16
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 98.11
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 97.92
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 97.88
3pmm_A382 Putative cytoplasmic protein; structural genomics, 97.84
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 97.52
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 97.45
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 96.88
1nc5_A373 Hypothetical protein YTER; structural genomics, he 96.85
3k11_A445 Putative glycosyl hydrolase; structural genomics, 96.82
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 96.66
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 96.52
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 96.45
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 96.18
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 94.75
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 93.74
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 92.75
3e6u_A411 LANC-like protein 1; alpha barrel, cytoplasm, sign 92.49
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 90.48
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 89.29
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 88.12
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 87.48
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 87.31
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 87.19
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 86.84
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 86.56
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 85.64
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 83.23
1tf4_A605 T. fusca endo/EXO-cellulase E4 catalytic domain an 82.63
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 82.57
2g0d_A409 Nisin biosynthesis protein NISC; alpha toroid, alp 82.5
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 82.2
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Back     alignment and structure
Probab=99.83  E-value=7.7e-21  Score=186.83  Aligned_cols=112  Identities=21%  Similarity=0.327  Sum_probs=100.9

Q ss_pred             CCccccCCCCCCCceEEeecCCceEEEecCCCCCCCceEEEeeccCCCC-CeEEEeecCCcceEEEEeeccCCCCcEEEE
Q 002940          725 GKSVMLEPFDSPGMLVIQHETDDELVVTDSFIAQGSSVFHLVAGLDGGD-RTVSLESETYKGCFVYTAVNLQSSESTKLG  803 (863)
Q Consensus       725 g~~v~l~p~~~p~~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpGl~g~~-g~vSles~~~pg~~~~~~~~~~~g~~~~l~  803 (863)
                      ++.|+|+++++|++||||++..+  ++++++...+|++|++||||++.+ |+|||||+++||+|||+.     |..|+|+
T Consensus         8 ~~~vsl~S~n~p~~ylRh~~~~~--~~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh~-----~~~l~L~   80 (157)
T 3kmv_A            8 ITKAKFQSYNYPNMYIRHANFDA--RIDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRHS-----NYDLSLE   80 (157)
T ss_dssp             --CBEEEESSSTTCEEEEETTEE--EEESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEEE-----TTEEEEE
T ss_pred             CccEEEEecCCCCcEEEEeCCeE--EEccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEEe-----CCEEEEe
Confidence            45899999999999999997765  667777788999999999998865 899999999999999996     8999999


Q ss_pred             eecCCCccccccccceecccCCCccCCceEEEecCCCcchhc
Q 002940          804 CISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLA  845 (863)
Q Consensus       804 ~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~  845 (863)
                      +  .++++.|+++|+|..++||++...+||++...++.||..
T Consensus        81 ~--~~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh  120 (157)
T 3kmv_A           81 K--NDGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRH  120 (157)
T ss_dssp             E--CCSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEE
T ss_pred             c--cCCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEE
Confidence            7  578889999999999999999999999999999999976



>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* Back     alignment and structure
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum} Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A* Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query863
d1wd3a2162 Alpha-L-arabinofuranosidase B (AbfB), C-terminal d 99.65
d1wd3a2162 Alpha-L-arabinofuranosidase B (AbfB), C-terminal d 99.33
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 98.96
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 98.27
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 97.08
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 97.05
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 96.55
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 95.68
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 94.8
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 94.1
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 94.07
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 93.96
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 93.86
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 93.63
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 93.05
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 93.04
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 92.64
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 92.34
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 92.04
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 91.71
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 90.01
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 89.87
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 88.89
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 87.57
>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} Back     information, alignment and structure
class: All beta proteins
fold: beta-Trefoil
superfamily: AbfB domain
family: AbfB domain
domain: Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain
species: Aspergillus kawachii [TaxId: 40384]
Probab=99.65  E-value=1.4e-16  Score=154.45  Aligned_cols=117  Identities=15%  Similarity=0.147  Sum_probs=97.1

Q ss_pred             ccCCCCCcc--ccCCCCCCCceEEeecCCceEEEecCCC---CCCCceEEEeeccCCCCCeEEEeecCCcceEEEEeecc
Q 002940          720 LNDFIGKSV--MLEPFDSPGMLVIQHETDDELVVTDSFI---AQGSSVFHLVAGLDGGDRTVSLESETYKGCFVYTAVNL  794 (863)
Q Consensus       720 p~~~~g~~v--~l~p~~~p~~~v~~~~~~~~l~v~~~~~---~~~~s~f~~vpGl~g~~g~vSles~~~pg~~~~~~~~~  794 (863)
                      |.-..|+.+  +++..+.|++||||++....|.+....+   ...|++|+|||||++ +|+|||||+++||.||||.   
T Consensus         5 ~~l~~G~~~slr~~s~~y~~rylrH~~~~~~l~~v~~~s~~~~k~dasf~v~~Gl~~-~~~vSfES~n~Pg~yLRH~---   80 (162)
T d1wd3a2           5 PSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-SQCFSFESVDTPGSYIRHY---   80 (162)
T ss_dssp             SCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-TTSEEEEESSSTTEEEEEE---
T ss_pred             CccccCceEEEEEeCCCCCceEEEEcCCcEEEEeccCCcchhhcccceEEEccCcCC-CCeEEEEEcCCCCcEEEEE---
Confidence            334456644  6689999999999997777665432222   256899999999998 7999999999999999996   


Q ss_pred             CCCCcEEEEeecCCCccccccccceecccCCCccCCceEEEecCCCcchhc
Q 002940          795 QSSESTKLGCISESTEAGFNNAASFVIEKGLSEYHPISFVAKGANRNFLLA  845 (863)
Q Consensus       795 ~~g~~~~l~~~~~~~~~~f~~~asF~~~~gl~~y~piSf~a~g~~~~~ll~  845 (863)
                        +..|+|. + +++++.|.++|||..++|| ....+||+...-+..||.+
T Consensus        81 --n~~l~L~-~-~d~s~~F~~DATF~~~~gl-~~~g~SfeS~n~p~~YlRH  126 (162)
T d1wd3a2          81 --NFELLLN-A-NDGTKQFHEDATFCPQAAL-NGEGTSLRSWSYPTRYFRH  126 (162)
T ss_dssp             --TTEEEEE-E-CCCCHHHHHHTCEEEEECT-TSSSEEEEESSSTTCEEEE
T ss_pred             --CCEEEEe-c-CCCccccccCceEEEeeCc-CCCceEEEEecCCCceEEe
Confidence              7899999 5 5888999999999999999 5578999999999888854



>d1wd3a2 b.42.8.1 (A:338-499) Alpha-L-arabinofuranosidase B (AbfB), C-terminal domain {Aspergillus kawachii [TaxId: 40384]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure