Citrus Sinensis ID: 002960

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860--
MAAGDDSDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKFTPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
cccccccccccEEEEcEEEEEEEEEEcccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEEEEEcccEEEEEEcccccccccccEEEEEEccccccEEEEEEEccccccccEEEEEEEccccccccccEEEEEEccccccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEccccEEEccccHHHHHHHHHHHcccEEEEEEEEcccccEEEEccccccccccccHHHHHHHHHHHcccEEEEEEEccccccccccccccccccccHHHHHHHcccccccEEccccccccccEEEEEcccccccccccEEEEEEcccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHccccccccccHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccccccccccccccccccEEEEEEEEEEEEEEcEEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccEEEcccccccccccccccccccccccccccccccccccc
cccccccccccEEEEEccEEEEEEEccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccEEEEEccccEEEEEEEEcccccccccEEEEEEEEccccEEEEEEEcccccccEEEEEEEEEHHHHcccccccccEEEccccccccccccEEEEEEEEEcHHHcHHHHcccccccccccccccccccccccEEEEEEEcccccccccccEcccccccccccHHHHHHHHHHHHccEEEEEccEEccEEEEEEcccccccccccccHHHHHHHHHHcccEEEEEEEccccccccccEccccccccccHHHHHHHccccEEEEEccccccccccEEEEEEEEEEEEcccEEEEEEccccccccEEEEEEcccEccccccccccccccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEHHcHHHHcccccccccccccccccccccccccccccccccEEEEEEEccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHccEEEEEEEEEEccccccccccccccHcccHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHEEEEEcccccccccccccccccHHHHHHHHcEEEEEEEccEEEEccEEEEEEEccccccccccccccHEEEEEEccccHHccccccccccEHHHHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHccHHHcccccEEEEEEEEcccccEccccccccccccccEEEccccccccccccc
maagddsdkeKVIYLHGDLDLKIirarrlpnmdmMSEHLRRCFtacdvcktpapthetfqdddgvrhtskiirkskiitsdpyvtvvVPQATVARTRVlknsqepvwnehfniplahplsnleiqvkdddvfgaqiigtaaipahtiATGELISRWydiiapsgsppkpgasiqlelkftpcdknplyrqgiagdpehkgvrnayfplrkgshvrlyqdahvtegilpeipldggklykpgtcweDICHAISEAHHLIYIVGWSVFHKIKLIreqtrplprggdltlGELLKYKSEEGVRVLLLVWDdktshdklgvktpgvmathdeeTKKFFKhssvncvlapryassklsyfkQQIVGTIFTHHQKCVLvdtqasgnnrkITAFIGgidlcdgrydtpehrlfrdldtvfkddfhnptypigtkaprepwhdlhcrldgpaaYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRIswilspelslktngttivprddnvvrvskeddpenwhVQIFRsidsgsvkgfpksiediddqslICAKDVVIDKSIQTAYIQAIRSAQHFIYIENqyflgssyawpsyknagadnliPMELALKIASKIRANERFAVYVIipmwpegdpktnTVQEILFWQSQTMQMMYSVVAQELREmqvdahpqdylSFYClgkreeapkdvlanngdkvsdsqknQRFMIYVHakgmivddeyVIMGSaninqrsmagskdteiamgsyqphhtwarklkhphgqiygYRKSLWSEHLgmldncfeepeslDCIRKVNQIAgenwgrftameftplqghllryplqvdadgtvsplpgyeqfpdaggkiigvhsmslpdmltt
maagddsdkekviylhgdldlkiirARRLPNMDMMSEHLRRCFTACDVCKTPapthetfqdddgvrhTSKIIrkskiitsdpyvtvVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKFTPCDKNPLYRqgiagdpehkgVRNAYFPLRKGSHVRLYQDAHVtegilpeipldGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIreqtrplprggdLTLGELLKYKSEEGVRVLLLvwddktshdklgvktpgvMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVdtqasgnnrkITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPtypigtkaprepWHDLHCRLDGPAAYDVLINFEQRWrkatklteltfkfkrvshwrddYLIKIGRiswilspelslktngttivprddnvvrvskeddpenwhvqifrsidsgsvkgFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPmwpegdpkTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLanngdkvsdsqknqRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
MAAGDDSDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHtskiirkskiitsDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDiiapsgsppkpgasiQLELKFTPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
***********VIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIA************QLELKFTPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRV******ENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGK***********************RFMIYVHAKGMIVDDEYVIMGSANI*************AMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGV***********
*************YLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTP**********************SKIITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIA***********IQLELKFTPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSP*LS***NGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGD***NTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQP*********HPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
********KEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKFTPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
********KEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAP*H*T******************IITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKFTPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKD***NNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLP*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAAGDDSDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKFTPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query862 2.2.26 [Sep-21-2011]
Q9C5Y0868 Phospholipase D delta OS= yes no 0.987 0.980 0.721 0.0
P937331083 Phospholipase D beta 1 OS no no 0.921 0.733 0.545 0.0
Q9T053858 Phospholipase D gamma 1 O no no 0.940 0.945 0.509 0.0
O23078927 Phospholipase D beta 2 OS no no 0.923 0.858 0.512 0.0
Q9T052866 Phospholipase D gamma 3 O no no 0.931 0.927 0.508 0.0
Q9T051856 Phospholipase D gamma 2 O no no 0.932 0.939 0.498 0.0
P93400808 Phospholipase D alpha 1 O N/A no 0.859 0.917 0.484 0.0
Q41142808 Phospholipase D alpha 1 O N/A no 0.864 0.922 0.477 0.0
P86387808 Phospholipase D alpha 1 O N/A no 0.858 0.915 0.475 0.0
O04865809 Phospholipase D alpha 1 O N/A no 0.860 0.917 0.484 0.0
>sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2 Back     alignment and function desciption
 Score = 1316 bits (3406), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 623/864 (72%), Positives = 710/864 (82%), Gaps = 13/864 (1%)

Query: 10  EKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTS 69
           E V+ LHGDLDLKI++ARRLPNMDM SEHLRR FTAC+ C  P  T +    D G     
Sbjct: 7   EDVMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDK 66

Query: 70  KIIRKSKIITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDD 129
            I    K+ITSDPYVTVVVPQAT+ARTRVLKNSQEP+W+E FNI +AHP + LE QVKDD
Sbjct: 67  NIRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDD 126

Query: 130 DVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKFTPCDKNPLYR 189
           DVFGAQIIGTA IP   IA+GE IS W+ ++  SG PPK   +I +++KFTP D+   YR
Sbjct: 127 DVFGAQIIGTAKIPVRDIASGERISGWFPVLGASGKPPKAETAIFIDMKFTPFDQIHSYR 186

Query: 190 QGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICH 249
            GIAGDPE +GVR  YFP+RKGS VRLYQDAHV +G LP I LD GK+Y+ G CWEDIC+
Sbjct: 187 CGIAGDPERRGVRRTYFPVRKGSQVRLYQDAHVMDGTLPAIGLDNGKVYEHGKCWEDICY 246

Query: 250 AISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDK 309
           AISEAHH+IYIVGWS+FHKIKL+RE    +PR  D+TLGELLKYKS+EGVRVLLLVWDDK
Sbjct: 247 AISEAHHMIYIVGWSIFHKIKLVRETK--VPRDKDMTLGELLKYKSQEGVRVLLLVWDDK 304

Query: 310 TSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQ----------- 358
           TSHDK G+KTPGVM THDEET+KFFKHSSV CVL+PRYASSKL  FKQQ           
Sbjct: 305 TSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPSSSIYIMT 364

Query: 359 IVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFH 418
           +VGT+FTHHQKCVLVDTQA GNNRK+TAFIGG+DLCDGRYDTPEHR+  DLDTVFKDDFH
Sbjct: 365 VVGTLFTHHQKCVLVDTQAVGNNRKVTAFIGGLDLCDGRYDTPEHRILHDLDTVFKDDFH 424

Query: 419 NPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDD 478
           NPT+P GTKAPR+PWHDLHCR+DGPAAYDVLINFEQRWRKAT+  E + + K  +HW+DD
Sbjct: 425 NPTFPAGTKAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDD 484

Query: 479 YLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGF 538
            LI+IGRISWILSP      +GT+I+P DD  V VSKEDDPENWHVQIFRSIDSGSVKGF
Sbjct: 485 ALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGF 544

Query: 539 PKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAG 598
           PK  ++ + Q L CAK +V+DKSIQTAYIQ IRSAQHFIYIENQYFLGSSYAWPSY++AG
Sbjct: 545 PKYEDEAEAQHLECAKRLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAG 604

Query: 599 ADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVV 658
           ADNLIPMELALKI SKIRA ERFAVYV+IP+WPEGDPK+  VQEIL+WQSQTMQMMY V+
Sbjct: 605 ADNLIPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVI 664

Query: 659 AQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIV 718
           A+EL+ +Q DAHP DYL+FYCLGKRE+ P D+ A NG  VSDS   QRFMIYVHAKGMIV
Sbjct: 665 AKELKAVQSDAHPLDYLNFYCLGKREQLPDDMPATNGSVVSDSYNFQRFMIYVHAKGMIV 724

Query: 719 DDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLG 778
           DDEYV+MGSANINQRSMAG+KDTEIAMG+YQP+HTWA K +HP GQ+YGYR SLW+EHLG
Sbjct: 725 DDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLG 784

Query: 779 MLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGY 838
              + F EP  L+C++KVN I+ ENW RF   +F+ LQGHL++YPLQVD DG VSPLP Y
Sbjct: 785 KTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDY 844

Query: 839 EQFPDAGGKIIGVHSMSLPDMLTT 862
           E FPD GGKIIG HSM+LPD LTT
Sbjct: 845 ETFPDVGGKIIGAHSMALPDTLTT 868
Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. May be involved in phosphatidic acid accumulation in the dehydration stress response and in the transduction of hormonal and environmental signals to the microtubules cytoskeleton.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 4
>sp|P93733|PLDB1_ARATH Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=4 Back     alignment and function description
>sp|Q9T053|PLDG1_ARATH Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1 Back     alignment and function description
>sp|O23078|PLDB2_ARATH Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=3 Back     alignment and function description
>sp|Q9T052|PLDG3_ARATH Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1 Back     alignment and function description
>sp|Q9T051|PLDG2_ARATH Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3 Back     alignment and function description
>sp|P93400|PLDA1_TOBAC Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2 Back     alignment and function description
>sp|Q41142|PLDA1_RICCO Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1 Back     alignment and function description
>sp|P86387|PLDA1_CARPA Phospholipase D alpha 1 OS=Carica papaya GN=PLD1 PE=1 SV=1 Back     alignment and function description
>sp|O04865|PLDA1_VIGUN Phospholipase D alpha 1 OS=Vigna unguiculata GN=PLD1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query862
338795736865 phospholipase D delta [Litchi chinensis] 0.994 0.990 0.754 0.0
333595913865 phospholipase D delta [Dimocarpus longan 0.995 0.991 0.756 0.0
312283027860 unnamed protein product [Thellungiella h 0.989 0.991 0.734 0.0
359496145872 PREDICTED: phospholipase D delta-like [V 0.994 0.982 0.714 0.0
297798338869 atplddelta [Arabidopsis lyrata subsp. ly 0.987 0.979 0.728 0.0
23477711849 phospholipase D delta isoform [Gossypium 0.974 0.989 0.736 0.0
22795060849 phospholipase D delta isoform 1b [Gossyp 0.974 0.989 0.736 0.0
30690488857 phospholipase D delta [Arabidopsis thali 0.987 0.992 0.730 0.0
7486399 1071 hypothetical protein F4B14.60 - Arabidop 0.987 0.794 0.721 0.0
15983515848 AT4g35790/F4B14_60 [Arabidopsis thaliana 0.983 1.0 0.730 0.0
>gi|338795736|gb|AEI99558.1| phospholipase D delta [Litchi chinensis] Back     alignment and taxonomy information
 Score = 1366 bits (3536), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 654/867 (75%), Positives = 742/867 (85%), Gaps = 10/867 (1%)

Query: 2   AAGDD-SDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQ 60
           AAG+D S K +  YLHGDLDLKII ARRLPNMD+++ + RRCFTACD C+ P P+     
Sbjct: 3   AAGEDKSVKGQGTYLHGDLDLKIIAARRLPNMDVVASNFRRCFTACDACRPPHPSSRPPS 62

Query: 61  -DDDGVRHTSKIIRKSKIITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPL 119
              DG    S      KIIT+DPYVTVVVPQATVARTRVLKN+Q P W+EHF IPLAHP+
Sbjct: 63  VHGDGDNKKSH----HKIITTDPYVTVVVPQATVARTRVLKNTQSPHWDEHFVIPLAHPV 118

Query: 120 SNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKF 179
            +LE QVKDDDVFGA++IG A IPA  IA G++IS W+ II   G PP+  A+I+LE+KF
Sbjct: 119 VDLEFQVKDDDVFGAELIGKAKIPASLIAAGDVISDWFPIINAKGQPPRLDAAIRLEMKF 178

Query: 180 TPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYK 239
           TPC++NPLYR G+AGDPE  GVR  YFPLRKG  + LYQDAHV  G LPE+ LDG   YK
Sbjct: 179 TPCEENPLYRHGVAGDPEQSGVRRTYFPLRKGCQLTLYQDAHVKPGQLPEVKLDGHVDYK 238

Query: 240 PGTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGV 299
             TCWEDIC+AISEAHHL+YIVGWSVF+KIKLIRE TR LPRGGDLTLGELLKYKSEEGV
Sbjct: 239 ADTCWEDICYAISEAHHLVYIVGWSVFYKIKLIREPTRQLPRGGDLTLGELLKYKSEEGV 298

Query: 300 RVLLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQI 359
           R+LLLVWDDKTSHDK GVKT GVM THDEET+KFFKHSSVNCVLAPRYASSKL  FKQQ+
Sbjct: 299 RILLLVWDDKTSHDKFGVKTGGVMGTHDEETRKFFKHSSVNCVLAPRYASSKLGIFKQQV 358

Query: 360 VGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFHN 419
           VGT+FTHHQKCV+VDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDL+T+F+ DFHN
Sbjct: 359 VGTMFTHHQKCVIVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLNTIFEGDFHN 418

Query: 420 PTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDDY 479
           PTYP   KAPR+PWHDLHCR+DGPAAYDVLINFEQRWRK+TK  E + KFK+VSHW DD 
Sbjct: 419 PTYPSTVKAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKSTKWKEFSLKFKKVSHWHDDS 478

Query: 480 LIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFP 539
           LIKI RISWILSPELS    GTTIVP DD +VRVS E +PENWHVQ+FRSIDSGS+KGFP
Sbjct: 479 LIKIERISWILSPELSSTREGTTIVPTDDRIVRVSDEKNPENWHVQVFRSIDSGSLKGFP 538

Query: 540 KS--IEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNA 597
           KS  I+ I++Q+L+CAKD+VI+KSIQ AYIQAIRSAQH+IYIENQYFLGSSYAWPSYK+A
Sbjct: 539 KSINIKQIEEQNLLCAKDLVIEKSIQAAYIQAIRSAQHYIYIENQYFLGSSYAWPSYKDA 598

Query: 598 GADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSV 657
           GADNLIPMELALKIASKIRA ERFAVY+IIPMWPEGDPK NTVQEILFWQSQTMQMMY++
Sbjct: 599 GADNLIPMELALKIASKIRAKERFAVYIIIPMWPEGDPKDNTVQEILFWQSQTMQMMYNI 658

Query: 658 VAQELREMQ--VDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKG 715
           VAQ L++MQ  +D+HPQDYL+FYCLG REE PKD    NG  VS+SQKN+RFMIYVHAKG
Sbjct: 659 VAQALKDMQMDMDSHPQDYLNFYCLGNREELPKDASNTNGATVSESQKNRRFMIYVHAKG 718

Query: 716 MIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSE 775
           +IVDDEYVI+GSANINQRSMAG+KDTEIAMG+YQPHHTWA+K K P GQ+YGYR SLW+E
Sbjct: 719 IIVDDEYVIVGSANINQRSMAGTKDTEIAMGAYQPHHTWAKKKKRPFGQVYGYRMSLWAE 778

Query: 776 HLGMLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPL 835
           HLG L++ F+EPESL+C+++VN IA ENW RFTA +FT LQGHLL+YPL +  DG V PL
Sbjct: 779 HLGELESHFKEPESLECVKRVNDIADENWKRFTAPDFTLLQGHLLKYPLHICKDGKVEPL 838

Query: 836 PGYEQFPDAGGKIIGVHSMSLPDMLTT 862
           PG+E FPDAGG++IG+HSM LPD+LTT
Sbjct: 839 PGHENFPDAGGRVIGIHSMRLPDVLTT 865

Source: Litchi chinensis

Species: Litchi chinensis

Genus: Litchi

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|333595913|gb|AEF58504.1| phospholipase D delta [Dimocarpus longan] Back     alignment and taxonomy information
>gi|312283027|dbj|BAJ34379.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|359496145|ref|XP_002270350.2| PREDICTED: phospholipase D delta-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297798338|ref|XP_002867053.1| atplddelta [Arabidopsis lyrata subsp. lyrata] gi|297312889|gb|EFH43312.1| atplddelta [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|23477711|gb|AAN34820.1| phospholipase D delta isoform [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|22795060|gb|AAN05432.1| phospholipase D delta isoform 1b [Gossypium hirsutum] Back     alignment and taxonomy information
>gi|30690488|ref|NP_849501.1| phospholipase D delta [Arabidopsis thaliana] gi|12484119|gb|AAG53975.1|AF322228_1 phospholipase D delta [Arabidopsis thaliana] gi|15987418|gb|AAL11978.1|AF306345_1 phospholipase D [Arabidopsis thaliana] gi|110742679|dbj|BAE99251.1| phospholipase D [Arabidopsis thaliana] gi|332661171|gb|AEE86571.1| phospholipase D delta [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|7486399|pir||T04689 hypothetical protein F4B14.60 - Arabidopsis thaliana gi|3805845|emb|CAA21465.1| putative protein [Arabidopsis thaliana] gi|7270531|emb|CAB81488.1| putative protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15983515|gb|AAL11625.1|AF424632_1 AT4g35790/F4B14_60 [Arabidopsis thaliana] gi|21360475|gb|AAM47353.1| AT4g35790/F4B14_60 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query862
TAIR|locus:2125314868 PLDDELTA "phospholipase D delt 0.987 0.980 0.709 0.0
TAIR|locus:20646071083 PLDBETA1 "phospholipase D beta 0.893 0.710 0.547 9.9e-240
TAIR|locus:2137045858 PLDGAMMA1 "phospholipase D gam 0.877 0.881 0.528 1.3e-228
TAIR|locus:2126001927 PLDBETA2 "phospholipase D beta 0.878 0.816 0.522 1.3e-228
TAIR|locus:2137035866 PLDGAMMA3 "phospholipase D gam 0.865 0.861 0.529 6.9e-228
TAIR|locus:2137025856 PLDGAMMA2 "phospholipase D gam 0.873 0.879 0.523 3.4e-219
UNIPROTKB|P86387808 PLD1 "Phospholipase D alpha 1" 0.431 0.460 0.490 6.3e-192
TAIR|locus:2093227810 PLDALPHA1 "phospholipase D alp 0.446 0.475 0.488 5e-190
TAIR|locus:2035211810 PLDALPHA2 "phospholipase D alp 0.419 0.446 0.503 2.8e-187
TAIR|locus:2145452820 PLDALPHA3 "phospholipase D alp 0.404 0.425 0.509 7e-182
TAIR|locus:2125314 PLDDELTA "phospholipase D delta" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3291 (1163.5 bits), Expect = 0., P = 0.
 Identities = 613/864 (70%), Positives = 697/864 (80%)

Query:    10 EKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHXX 69
             E V+ LHGDLDLKI++ARRLPNMDM SEHLRR FTAC+ C  P  T +    D G     
Sbjct:     7 EDVMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDK 66

Query:    70 XXXXXXXXXXXDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDD 129
                        DPYVTVVVPQAT+ARTRVLKNSQEP+W+E FNI +AHP + LE QVKDD
Sbjct:    67 NIRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDD 126

Query:   130 DVFGAQIIGTAAIPAHTIATGELISRWYDXXXXXXXXXXXXXXXQLELKFTPCDKNPLYR 189
             DVFGAQIIGTA IP   IA+GE IS W+                 +++KFTP D+   YR
Sbjct:   127 DVFGAQIIGTAKIPVRDIASGERISGWFPVLGASGKPPKAETAIFIDMKFTPFDQIHSYR 186

Query:   190 QGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICH 249
              GIAGDPE +GVR  YFP+RKGS VRLYQDAHV +G LP I LD GK+Y+ G CWEDIC+
Sbjct:   187 CGIAGDPERRGVRRTYFPVRKGSQVRLYQDAHVMDGTLPAIGLDNGKVYEHGKCWEDICY 246

Query:   250 AISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDK 309
             AISEAHH+IYIVGWS+FHKIKL+RE T+ +PR  D+TLGELLKYKS+EGVRVLLLVWDDK
Sbjct:   247 AISEAHHMIYIVGWSIFHKIKLVRE-TK-VPRDKDMTLGELLKYKSQEGVRVLLLVWDDK 304

Query:   310 TSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQ----------- 358
             TSHDK G+KTPGVM THDEET+KFFKHSSV CVL+PRYASSKL  FKQQ           
Sbjct:   305 TSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPSSSIYIMT 364

Query:   359 IVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFH 418
             +VGT+FTHHQKCVLVDTQA GNNRK+TAFIGG+DLCDGRYDTPEHR+  DLDTVFKDDFH
Sbjct:   365 VVGTLFTHHQKCVLVDTQAVGNNRKVTAFIGGLDLCDGRYDTPEHRILHDLDTVFKDDFH 424

Query:   419 NPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDD 478
             NPT+P GTKAPR+PWHDLHCR+DGPAAYDVLINFEQRWRKAT+  E + + K  +HW+DD
Sbjct:   425 NPTFPAGTKAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDD 484

Query:   479 YLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGF 538
              LI+IGRISWILSP      +GT+I+P DD  V VSKEDDPENWHVQIFRSIDSGSVKGF
Sbjct:   485 ALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGF 544

Query:   539 PKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAG 598
             PK  ++ + Q L CAK +V+DKSIQTAYIQ IRSAQHFIYIENQYFLGSSYAWPSY++AG
Sbjct:   545 PKYEDEAEAQHLECAKRLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAG 604

Query:   599 ADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVV 658
             ADNLIPMELALKI SKIRA ERFAVYV+IP+WPEGDPK+  VQEIL+WQSQTMQMMY V+
Sbjct:   605 ADNLIPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVI 664

Query:   659 AQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIV 718
             A+EL+ +Q DAHP DYL+FYCLGKRE+ P D+ A NG  VSDS   QRFMIYVHAKGMIV
Sbjct:   665 AKELKAVQSDAHPLDYLNFYCLGKREQLPDDMPATNGSVVSDSYNFQRFMIYVHAKGMIV 724

Query:   719 DDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLG 778
             DDEYV+MGSANINQRSMAG+KDTEIAMG+YQP+HTWA K +HP GQ+YGYR SLW+EHLG
Sbjct:   725 DDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLG 784

Query:   779 MLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGY 838
                + F EP  L+C++KVN I+ ENW RF   +F+ LQGHL++YPLQVD DG VSPLP Y
Sbjct:   785 KTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDY 844

Query:   839 EQFPDAGGKIIGVHSMSLPDMLTT 862
             E FPD GGKIIG HSM+LPD LTT
Sbjct:   845 ETFPDVGGKIIGAHSMALPDTLTT 868
GO:0003824 "catalytic activity" evidence=IEA
GO:0004630 "phospholipase D activity" evidence=IEA;ISS;IMP;IDA
GO:0005509 "calcium ion binding" evidence=IEA
GO:0016020 "membrane" evidence=IEA;IDA
GO:0046473 "phosphatidic acid metabolic process" evidence=IMP
GO:0012501 "programmed cell death" evidence=IMP
GO:0009409 "response to cold" evidence=IEP;IMP
GO:0005773 "vacuole" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0009789 "positive regulation of abscisic acid mediated signaling pathway" evidence=IMP
GO:0090333 "regulation of stomatal closure" evidence=IMP
TAIR|locus:2064607 PLDBETA1 "phospholipase D beta 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137045 PLDGAMMA1 "phospholipase D gamma 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126001 PLDBETA2 "phospholipase D beta 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137035 PLDGAMMA3 "phospholipase D gamma 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137025 PLDGAMMA2 "phospholipase D gamma 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P86387 PLD1 "Phospholipase D alpha 1" [Carica papaya (taxid:3649)] Back     alignment and assigned GO terms
TAIR|locus:2093227 PLDALPHA1 "phospholipase D alpha 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035211 PLDALPHA2 "phospholipase D alpha 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145452 PLDALPHA3 "phospholipase D alpha 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9C5Y0PLDD1_ARATH3, ., 1, ., 4, ., 40.72100.98720.9804yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.4.40.979
3rd Layer3.1.40.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query862
PLN03008868 PLN03008, PLN03008, Phospholipase D delta 0.0
PLN02270808 PLN02270, PLN02270, phospholipase D alpha 0.0
PLN02352758 PLN02352, PLN02352, phospholipase D epsilon 0.0
cd09200211 cd09200, PLDc_pPLDbeta_2, Catalytic domain, repeat 1e-115
cd09198180 cd09198, PLDc_pPLDbeta_1, Catalytic domain, repeat 1e-108
cd09142208 cd09142, PLDc_pPLD_like_2, Catalytic domain, repea 1e-104
cd09199211 cd09199, PLDc_pPLDalpha_2, Catalytic domain, repea 2e-84
cd09139176 cd09139, PLDc_pPLD_like_1, Catalytic domain, repea 8e-83
cd09197178 cd09197, PLDc_pPLDalpha_1, Catalytic domain, repea 3e-70
cd04015158 cd04015, C2_plant_PLD, C2 domain present in plant 2e-67
cd09141183 cd09141, PLDc_vPLD1_2_yPLD_like_2, Catalytic domai 7e-47
pfam1235774 pfam12357, PLD_C, Phospholipase D C terminal 1e-38
cd09105146 cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, re 8e-33
cd09844182 cd09844, PLDc_vPLD1_2, Catalytic domain, repeat 2, 3e-27
PLN028661068 PLN02866, PLN02866, phospholipase D 4e-26
cd09104147 cd09104, PLDc_vPLD1_2_like_1, Catalytic domain, re 7e-26
cd09845182 cd09845, PLDc_vPLD2_2, Catalytic domain, repeat 2, 2e-25
PLN02866 1068 PLN02866, PLN02866, phospholipase D 2e-20
cd09138146 cd09138, PLDc_vPLD1_2_yPLD_like_1, Catalytic domai 4e-20
cd09143142 cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain 8e-20
cd00030102 cd00030, C2, C2 domain 6e-17
smart00239101 smart00239, C2, Protein kinase C conserved region 5e-15
cd09140146 cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain 8e-14
pfam0016885 pfam00168, C2, C2 domain 8e-13
COG1502438 COG1502, Cls, Phosphatidylserine/phosphatidylglyce 3e-12
cd09842151 cd09842, PLDc_vPLD1_1, Catalytic domain, repeat 1, 3e-12
cd04036119 cd04036, C2_cPLA2, C2 domain present in cytosolic 2e-11
cd08373127 cd08373, C2A_Ferlin, C2 domain first repeat in Fer 6e-10
cd00275128 cd00275, C2_PLC_like, C2 domain present in Phospho 2e-09
cd04021125 cd04021, C2_E3_ubiquitin_ligase, C2 domain present 1e-08
cd09843145 cd09843, PLDc_vPLD2_1, Catalytic domain, repeat 1, 2e-08
cd08391121 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain fir 3e-08
cd00276134 cd00276, C2B_Synaptotagmin, C2 domain second repea 2e-07
cd04038145 cd04038, C2_ArfGAP, C2 domain present in Arf GTPas 2e-07
COG50381227 COG5038, COG5038, Ca2+-dependent lipid-binding pro 4e-07
cd04050105 cd04050, C2B_Synaptotagmin-like, C2 domain second 1e-06
smart0015528 smart00155, PLDc, Phospholipase D 3e-06
cd04040115 cd04040, C2D_Tricalbin-like, C2 domain fourth repe 6e-06
cd04045120 cd04045, C2C_Tricalbin-like, C2 domain third repea 1e-05
cd04027127 cd04027, C2B_Munc13, C2 domain second repeat in Mu 2e-05
cd04009133 cd04009, C2B_Munc13-like, C2 domain second repeat 2e-05
cd09128142 cd09128, PLDc_unchar1_2, Putative catalytic domain 3e-05
pfam0061428 pfam00614, PLDc, Phospholipase D Active site motif 4e-05
cd08383117 cd08383, C2A_RasGAP, C2 domain (first repeat) of R 4e-05
cd00138119 cd00138, PLDc_SF, Catalytic domain of phospholipas 7e-05
COG50381227 COG5038, COG5038, Ca2+-dependent lipid-binding pro 1e-04
cd09112174 cd09112, PLDc_CLS_2, catalytic domain repeat 2 of 1e-04
cd04052111 cd04052, C2B_Tricalbin-like, C2 domain second repe 1e-04
cd04024128 cd04024, C2A_Synaptotagmin-like, C2 domain first r 1e-04
cd04044124 cd04044, C2A_Tricalbin-like, C2 domain first repea 1e-04
cd04013146 cd04013, C2_SynGAP_like, C2 domain present in Ras 1e-04
cd09162172 cd09162, PLDc_CLS_unchar1_2, Putative catalytic do 1e-04
cd04042121 cd04042, C2A_MCTP_PRT, C2 domain first repeat foun 1e-04
cd09110154 cd09110, PLDc_CLS_1, Catalytic domain, repeat 1, o 2e-04
pfam13091129 pfam13091, PLDc_2, PLD-like domain 2e-04
cd04018151 cd04018, C2C_Ferlin, C2 domain third repeat in Fer 3e-04
cd04054121 cd04054, C2A_Rasal1_RasA4, C2 domain first repeat 4e-04
cd04035123 cd04035, C2A_Rabphilin_Doc2, C2 domain first repea 7e-04
cd04030127 cd04030, C2C_KIAA1228, C2 domain third repeat pres 7e-04
cd04043126 cd04043, C2_Munc13_fungal, C2 domain in Munc13 (ma 8e-04
cd08681118 cd08681, C2_fungal_Inn1p-like, C2 domain found in 9e-04
cd09113218 cd09113, PLDc_ymdC_like_2, Putative catalytic doma 0.001
cd04031125 cd04031, C2A_RIM1alpha, C2 domain first repeat con 0.003
cd08405136 cd08405, C2B_Synaptotagmin-7, C2 domain second rep 0.003
cd08400126 cd08400, C2_Ras_p21A1, C2 domain present in RAS p2 0.004
cd04041111 cd04041, C2A_fungal, C2 domain first repeat; funga 0.004
>gnl|CDD|178585 PLN03008, PLN03008, Phospholipase D delta Back     alignment and domain information 
 Score = 1328 bits (3438), Expect = 0.0
 Identities = 623/864 (72%), Positives = 710/864 (82%), Gaps = 13/864 (1%)

Query: 10  EKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTS 69
           E V+ LHGDLDLKI++ARRLPNMDM SEHLRR FTAC+ C  P  T +    D G     
Sbjct: 7   EDVMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDK 66

Query: 70  KIIRKSKIITSDPYVTVVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDD 129
            I    K+ITSDPYVTVVVPQAT+ARTRVLKNSQEP+W+E FNI +AHP + LE QVKDD
Sbjct: 67  NIRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDD 126

Query: 130 DVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKFTPCDKNPLYR 189
           DVFGAQIIGTA IP   IA+GE IS W+ ++  SG PPK   +I +++KFTP D+   YR
Sbjct: 127 DVFGAQIIGTAKIPVRDIASGERISGWFPVLGASGKPPKAETAIFIDMKFTPFDQIHSYR 186

Query: 190 QGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWEDICH 249
            GIAGDPE +GVR  YFP+RKGS VRLYQDAHV +G LP I LD GK+Y+ G CWEDIC+
Sbjct: 187 CGIAGDPERRGVRRTYFPVRKGSQVRLYQDAHVMDGTLPAIGLDNGKVYEHGKCWEDICY 246

Query: 250 AISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDK 309
           AISEAHH+IYIVGWS+FHKIKL+RE    +PR  D+TLGELLKYKS+EGVRVLLLVWDDK
Sbjct: 247 AISEAHHMIYIVGWSIFHKIKLVRETK--VPRDKDMTLGELLKYKSQEGVRVLLLVWDDK 304

Query: 310 TSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQ----------- 358
           TSHDK G+KTPGVM THDEET+KFFKHSSV CVL+PRYASSKL  FKQQ           
Sbjct: 305 TSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPIFSIYVMT 364

Query: 359 IVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHRLFRDLDTVFKDDFH 418
           +VGT+FTHHQKCVLVDTQA GNNRK+TAFIGG+DLCDGRYDTPEHR+  DLDTVFKDDFH
Sbjct: 365 VVGTLFTHHQKCVLVDTQAVGNNRKVTAFIGGLDLCDGRYDTPEHRILHDLDTVFKDDFH 424

Query: 419 NPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRDD 478
           NPT+P GTKAPR+PWHDLHCR+DGPAAYDVLINFEQRWRKAT+  E + + K  +HW+DD
Sbjct: 425 NPTFPAGTKAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQDD 484

Query: 479 YLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGF 538
            LI+IGRISWILSP      +GT+I+P DD  V VSKEDDPENWHVQIFRSIDSGSVKGF
Sbjct: 485 ALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGF 544

Query: 539 PKSIEDIDDQSLICAKDVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAG 598
           PK  ++ + Q L CAK +V+DKSIQTAYIQ IRSAQHFIYIENQYFLGSSYAWPSY++AG
Sbjct: 545 PKYEDEAEAQHLECAKRLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAG 604

Query: 599 ADNLIPMELALKIASKIRANERFAVYVIIPMWPEGDPKTNTVQEILFWQSQTMQMMYSVV 658
           ADNLIPMELALKI SKIRA ERFAVYV+IP+WPEGDPK+  VQEIL+WQSQTMQMMY V+
Sbjct: 605 ADNLIPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMMYDVI 664

Query: 659 AQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAKGMIV 718
           A+EL+ +Q DAHP DYL+FYCLGKRE+ P D+ A NG  VSDS   QRFMIYVHAKGMIV
Sbjct: 665 AKELKAVQSDAHPLDYLNFYCLGKREQLPDDMPATNGSVVSDSYNFQRFMIYVHAKGMIV 724

Query: 719 DDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLG 778
           DDEYV+MGSANINQRSMAG+KDTEIAMG+YQP+HTWA K +HP GQ+YGYR SLW+EHLG
Sbjct: 725 DDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLG 784

Query: 779 MLDNCFEEPESLDCIRKVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGY 838
              + F EP  L+C++KVN I+ ENW RF   +F+ LQGHL++YPLQVD DG VSPLP Y
Sbjct: 785 KTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDY 844

Query: 839 EQFPDAGGKIIGVHSMSLPDMLTT 862
           E FPD GGKIIG HSM+LPD LTT
Sbjct: 845 ETFPDVGGKIIGAHSMALPDTLTT 868

Length = 868
>gnl|CDD|165912 PLN02270, PLN02270, phospholipase D alpha Back     alignment and domain information
>gnl|CDD|215202 PLN02352, PLN02352, phospholipase D epsilon Back     alignment and domain information
>gnl|CDD|197296 cd09200, PLDc_pPLDbeta_2, Catalytic domain, repeat 2, of plant beta-type phospholipase D Back     alignment and domain information
>gnl|CDD|197294 cd09198, PLDc_pPLDbeta_1, Catalytic domain, repeat 1, of plant beta-type phospholipase D Back     alignment and domain information
>gnl|CDD|197240 cd09142, PLDc_pPLD_like_2, Catalytic domain, repeat 2, of plant phospholipase D and similar proteins Back     alignment and domain information
>gnl|CDD|197295 cd09199, PLDc_pPLDalpha_2, Catalytic domain, repeat 2, of plant alpha-type phospholipase D Back     alignment and domain information
>gnl|CDD|197237 cd09139, PLDc_pPLD_like_1, Catalytic domain, repeat 1, of plant phospholipase D and similar proteins Back     alignment and domain information
>gnl|CDD|197293 cd09197, PLDc_pPLDalpha_1, Catalytic domain, repeat 1, of plant alpha-type phospholipase D Back     alignment and domain information
>gnl|CDD|175982 cd04015, C2_plant_PLD, C2 domain present in plant phospholipase D (PLD) Back     alignment and domain information
>gnl|CDD|197239 cd09141, PLDc_vPLD1_2_yPLD_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins Back     alignment and domain information
>gnl|CDD|193000 pfam12357, PLD_C, Phospholipase D C terminal Back     alignment and domain information
>gnl|CDD|197204 cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins Back     alignment and domain information
>gnl|CDD|197302 cd09844, PLDc_vPLD1_2, Catalytic domain, repeat 2, of vertebrate phospholipase D1 Back     alignment and domain information
>gnl|CDD|215467 PLN02866, PLN02866, phospholipase D Back     alignment and domain information
>gnl|CDD|197203 cd09104, PLDc_vPLD1_2_like_1, Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins Back     alignment and domain information
>gnl|CDD|197303 cd09845, PLDc_vPLD2_2, Catalytic domain, repeat 2, of vertebrate phospholipase D2 Back     alignment and domain information
>gnl|CDD|215467 PLN02866, PLN02866, phospholipase D Back     alignment and domain information
>gnl|CDD|197236 cd09138, PLDc_vPLD1_2_yPLD_like_1, Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins Back     alignment and domain information
>gnl|CDD|197241 cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain, repeat 2, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2 Back     alignment and domain information
>gnl|CDD|175973 cd00030, C2, C2 domain Back     alignment and domain information
>gnl|CDD|214577 smart00239, C2, Protein kinase C conserved region 2 (CalB) Back     alignment and domain information
>gnl|CDD|197238 cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain, repeat 1, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2 Back     alignment and domain information
>gnl|CDD|215765 pfam00168, C2, C2 domain Back     alignment and domain information
>gnl|CDD|224419 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|197300 cd09842, PLDc_vPLD1_1, Catalytic domain, repeat 1, of vertebrate phospholipase D1 Back     alignment and domain information
>gnl|CDD|176001 cd04036, C2_cPLA2, C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) Back     alignment and domain information
>gnl|CDD|176019 cd08373, C2A_Ferlin, C2 domain first repeat in Ferlin Back     alignment and domain information
>gnl|CDD|175974 cd00275, C2_PLC_like, C2 domain present in Phosphoinositide-specific phospholipases C (PLC) Back     alignment and domain information
>gnl|CDD|175988 cd04021, C2_E3_ubiquitin_ligase, C2 domain present in E3 ubiquitin ligase Back     alignment and domain information
>gnl|CDD|197301 cd09843, PLDc_vPLD2_1, Catalytic domain, repeat 1, of vertebrate phospholipase D2 Back     alignment and domain information
>gnl|CDD|176037 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain first and third repeat in Synaptotagmin-like proteins Back     alignment and domain information
>gnl|CDD|175975 cd00276, C2B_Synaptotagmin, C2 domain second repeat present in Synaptotagmin Back     alignment and domain information
>gnl|CDD|176003 cd04038, C2_ArfGAP, C2 domain present in Arf GTPase Activating Proteins (GAP) Back     alignment and domain information
>gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|176015 cd04050, C2B_Synaptotagmin-like, C2 domain second repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>gnl|CDD|197546 smart00155, PLDc, Phospholipase D Back     alignment and domain information
>gnl|CDD|176005 cd04040, C2D_Tricalbin-like, C2 domain fourth repeat present in Tricalbin-like proteins Back     alignment and domain information
>gnl|CDD|176010 cd04045, C2C_Tricalbin-like, C2 domain third repeat present in Tricalbin-like proteins Back     alignment and domain information
>gnl|CDD|175993 cd04027, C2B_Munc13, C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins Back     alignment and domain information
>gnl|CDD|175976 cd04009, C2B_Munc13-like, C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins Back     alignment and domain information
>gnl|CDD|197226 cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins Back     alignment and domain information
>gnl|CDD|216022 pfam00614, PLDc, Phospholipase D Active site motif Back     alignment and domain information
>gnl|CDD|176029 cd08383, C2A_RasGAP, C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) Back     alignment and domain information
>gnl|CDD|197200 cd00138, PLDc_SF, Catalytic domain of phospholipase D superfamily proteins Back     alignment and domain information
>gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|197211 cd09112, PLDc_CLS_2, catalytic domain repeat 2 of bacterial cardiolipin synthase and similar proteins Back     alignment and domain information
>gnl|CDD|176017 cd04052, C2B_Tricalbin-like, C2 domain second repeat present in Tricalbin-like proteins Back     alignment and domain information
>gnl|CDD|175990 cd04024, C2A_Synaptotagmin-like, C2 domain first repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>gnl|CDD|176009 cd04044, C2A_Tricalbin-like, C2 domain first repeat present in Tricalbin-like proteins Back     alignment and domain information
>gnl|CDD|175980 cd04013, C2_SynGAP_like, C2 domain present in Ras GTPase activating protein (GAP) family Back     alignment and domain information
>gnl|CDD|197259 cd09162, PLDc_CLS_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized proteins similar to bacterial cardiolipin synthase Back     alignment and domain information
>gnl|CDD|176007 cd04042, C2A_MCTP_PRT, C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) Back     alignment and domain information
>gnl|CDD|197209 cd09110, PLDc_CLS_1, Catalytic domain, repeat 1, of bacterial cardiolipin synthase and similar proteins Back     alignment and domain information
>gnl|CDD|221916 pfam13091, PLDc_2, PLD-like domain Back     alignment and domain information
>gnl|CDD|175985 cd04018, C2C_Ferlin, C2 domain third repeat in Ferlin Back     alignment and domain information
>gnl|CDD|176018 cd04054, C2A_Rasal1_RasA4, C2 domain first repeat present in RasA1 and RasA4 Back     alignment and domain information
>gnl|CDD|176000 cd04035, C2A_Rabphilin_Doc2, C2 domain first repeat present in Rabphilin and Double C2 domain Back     alignment and domain information
>gnl|CDD|175996 cd04030, C2C_KIAA1228, C2 domain third repeat present in uncharacterized human KIAA1228-like proteins Back     alignment and domain information
>gnl|CDD|176008 cd04043, C2_Munc13_fungal, C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group Back     alignment and domain information
>gnl|CDD|176063 cd08681, C2_fungal_Inn1p-like, C2 domain found in fungal Ingression 1 (Inn1) proteins Back     alignment and domain information
>gnl|CDD|197212 cd09113, PLDc_ymdC_like_2, Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins Back     alignment and domain information
>gnl|CDD|175997 cd04031, C2A_RIM1alpha, C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins Back     alignment and domain information
>gnl|CDD|176050 cd08405, C2B_Synaptotagmin-7, C2 domain second repeat present in Synaptotagmin 7 Back     alignment and domain information
>gnl|CDD|176045 cd08400, C2_Ras_p21A1, C2 domain present in RAS p21 protein activator 1 (RasA1) Back     alignment and domain information
>gnl|CDD|176006 cd04041, C2A_fungal, C2 domain first repeat; fungal group Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 862
PLN03008868 Phospholipase D delta 100.0
PLN02270808 phospholipase D alpha 100.0
PLN02352758 phospholipase D epsilon 100.0
KOG1329887 consensus Phospholipase D1 [Lipid transport and me 100.0
PLN028661068 phospholipase D 100.0
PRK12452509 cardiolipin synthetase; Reviewed 100.0
PRK01642483 cls cardiolipin synthetase; Reviewed 100.0
PRK11263411 cardiolipin synthase 2; Provisional 100.0
COG1502438 Cls Phosphatidylserine/phosphatidylglycerophosphat 100.0
PHA02820424 phospholipase-D-like protein; Provisional 100.0
PRK09428451 pssA phosphatidylserine synthase; Provisional 100.0
PHA03003369 palmytilated EEV membrane glycoprotein; Provisiona 100.0
cd04015158 C2_plant_PLD C2 domain present in plant phospholip 99.92
PF1235774 PLD_C: Phospholipase D C terminal ; InterPro: IPR0 99.9
cd04016121 C2_Tollip C2 domain present in Toll-interacting pr 99.84
cd04013146 C2_SynGAP_like C2 domain present in Ras GTPase act 99.83
cd08379126 C2D_MCTP_PRT_plant C2 domain fourth repeat found i 99.8
cd04042121 C2A_MCTP_PRT C2 domain first repeat found in Multi 99.78
cd08682126 C2_Rab11-FIP_classI C2 domain found in Rab11-famil 99.78
PRK05443691 polyphosphate kinase; Provisional 99.77
cd08401121 C2A_RasA2_RasA3 C2 domain first repeat present in 99.75
cd08400126 C2_Ras_p21A1 C2 domain present in RAS p21 protein 99.75
TIGR03705672 poly_P_kin polyphosphate kinase 1. Members of this 99.75
cd04019150 C2C_MCTP_PRT_plant C2 domain third repeat found in 99.74
cd04022127 C2A_MCTP_PRT_plant C2 domain first repeat found in 99.73
cd08681118 C2_fungal_Inn1p-like C2 domain found in fungal Ing 99.72
cd08678126 C2_C21orf25-like C2 domain found in the Human chro 99.71
cd08378121 C2B_MCTP_PRT_plant C2 domain second repeat found i 99.71
cd08377119 C2C_MCTP_PRT C2 domain third repeat found in Multi 99.71
cd04014132 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) 99.69
cd04054121 C2A_Rasal1_RasA4 C2 domain first repeat present in 99.69
cd04044124 C2A_Tricalbin-like C2 domain first repeat present 99.69
cd04033133 C2_NEDD4_NEDD4L C2 domain present in the Human neu 99.67
cd08376116 C2B_MCTP_PRT C2 domain second repeat found in Mult 99.67
cd08391121 C2A_C2C_Synaptotagmin_like C2 domain first and thi 99.67
cd04036119 C2_cPLA2 C2 domain present in cytosolic PhosphoLip 99.67
cd04024128 C2A_Synaptotagmin-like C2 domain first repeat pres 99.67
cd04025123 C2B_RasA1_RasA4 C2 domain second repeat present in 99.66
KOG1030168 consensus Predicted Ca2+-dependent phospholipid-bi 99.65
cd08677118 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a 99.65
cd08373127 C2A_Ferlin C2 domain first repeat in Ferlin. Ferli 99.65
cd08685119 C2_RGS-like C2 domain of the Regulator Of G-Protei 99.64
cd08395120 C2C_Munc13 C2 domain third repeat in Munc13 (mamma 99.64
cd08381122 C2B_PI3K_class_II C2 domain second repeat present 99.64
cd04046126 C2_Calpain C2 domain present in Calpain proteins. 99.64
cd08375136 C2_Intersectin C2 domain present in Intersectin. A 99.63
cd08688110 C2_KIAA0528-like C2 domain found in the Human KIAA 99.63
KOG3603456 consensus Predicted phospholipase D [General funct 99.62
cd04028146 C2B_RIM1alpha C2 domain second repeat contained in 99.62
cd08385124 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe 99.62
cd08387124 C2A_Synaptotagmin-8 C2A domain first repeat presen 99.61
cd04050105 C2B_Synaptotagmin-like C2 domain second repeat pre 99.61
cd08393125 C2A_SLP-1_2 C2 domain first repeat present in Syna 99.6
cd04043126 C2_Munc13_fungal C2 domain in Munc13 (mammalian un 99.6
cd08394127 C2A_Munc13 C2 domain first repeat in Munc13 (mamma 99.6
cd04045120 C2C_Tricalbin-like C2 domain third repeat present 99.6
cd04017135 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl 99.59
cd08382123 C2_Smurf-like C2 domain present in Smad ubiquitina 99.59
cd04051125 C2_SRC2_like C2 domain present in Soybean genes Re 99.59
cd04029125 C2A_SLP-4_5 C2 domain first repeat present in Syna 99.58
cd04018151 C2C_Ferlin C2 domain third repeat in Ferlin. Ferli 99.58
cd08392128 C2A_SLP-3 C2 domain first repeat present in Synapt 99.58
cd08690155 C2_Freud-1 C2 domain found in 5' repressor element 99.58
cd04027127 C2B_Munc13 C2 domain second repeat in Munc13 (mamm 99.58
cd04041111 C2A_fungal C2 domain first repeat; fungal group. C 99.58
cd08383117 C2A_RasGAP C2 domain (first repeat) of Ras GTPase 99.57
cd04010148 C2B_RasA3 C2 domain second repeat present in RAS p 99.56
cd08680124 C2_Kibra C2 domain found in Human protein Kibra. K 99.56
cd04030127 C2C_KIAA1228 C2 domain third repeat present in unc 99.56
cd04031125 C2A_RIM1alpha C2 domain first repeat contained in 99.55
cd04040115 C2D_Tricalbin-like C2 domain fourth repeat present 99.55
cd04039108 C2_PSD C2 domain present in Phosphatidylserine dec 99.55
cd08386125 C2A_Synaptotagmin-7 C2A domain first repeat presen 99.54
cd04052111 C2B_Tricalbin-like C2 domain second repeat present 99.54
cd08388128 C2A_Synaptotagmin-4-11 C2A domain first repeat pre 99.54
cd04049124 C2_putative_Elicitor-responsive_gene C2 domain pre 99.53
cd08521123 C2A_SLP C2 domain first repeat present in Synaptot 99.53
cd08407138 C2B_Synaptotagmin-13 C2 domain second repeat prese 99.53
cd00138176 PLDc Phospholipase D. Active site motifs; The PLD 99.51
cd08384133 C2B_Rabphilin_Doc2 C2 domain second repeat present 99.51
cd04011111 C2B_Ferlin C2 domain second repeat in Ferlin. Ferl 99.51
cd08676153 C2A_Munc13-like C2 domain first repeat in Munc13 ( 99.51
cd08406136 C2B_Synaptotagmin-12 C2 domain second repeat prese 99.5
cd08390123 C2A_Synaptotagmin-15-17 C2A domain first repeat pr 99.5
cd08402136 C2B_Synaptotagmin-1 C2 domain second repeat presen 99.5
cd04038145 C2_ArfGAP C2 domain present in Arf GTPase Activati 99.5
cd08692135 C2B_Tac2-N C2 domain second repeat found in Tac2-N 99.5
cd08675137 C2B_RasGAP C2 domain second repeat of Ras GTPase a 99.49
cd08404136 C2B_Synaptotagmin-4 C2 domain second repeat presen 99.49
cd08389124 C2A_Synaptotagmin-14_16 C2A domain first repeat pr 99.49
cd04020162 C2B_SLP_1-2-3-4 C2 domain second repeat present in 99.49
cd00275128 C2_PLC_like C2 domain present in Phosphoinositide- 99.48
cd08403134 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe 99.48
cd08405136 C2B_Synaptotagmin-7 C2 domain second repeat presen 99.47
cd04026131 C2_PKC_alpha_gamma C2 domain in Protein Kinase C ( 99.47
cd04021125 C2_E3_ubiquitin_ligase C2 domain present in E3 ubi 99.47
cd04032127 C2_Perforin C2 domain of Perforin. Perforin contai 99.46
KOG1028421 consensus Ca2+-dependent phospholipid-binding prot 99.45
cd00276134 C2B_Synaptotagmin C2 domain second repeat present 99.45
cd08409137 C2B_Synaptotagmin-15 C2 domain second repeat prese 99.43
cd08686118 C2_ABR C2 domain in the Active BCR (Breakpoint clu 99.43
KOG0696683 consensus Serine/threonine protein kinase [Signal 99.43
PHA02820 424 phospholipase-D-like protein; Provisional 99.42
cd04009133 C2B_Munc13-like C2 domain second repeat in Munc13 99.42
cd08410135 C2B_Synaptotagmin-17 C2 domain second repeat prese 99.41
cd08691137 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li 99.41
cd08408138 C2B_Synaptotagmin-14_16 C2 domain second repeat pr 99.41
PRK13912177 nuclease NucT; Provisional 99.39
cd04037124 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli 99.39
cd04048120 C2A_Copine C2 domain first repeat in Copine. There 99.39
cd04035123 C2A_Rabphilin_Doc2 C2 domain first repeat present 99.36
PLN032002102 cellulose synthase-interactive protein; Provisiona 99.35
KOG2059800 consensus Ras GTPase-activating protein [Signal tr 99.34
cd00138176 PLDc Phospholipase D. Active site motifs; The PLD 99.31
PHA03003369 palmytilated EEV membrane glycoprotein; Provisiona 99.31
PRK13912177 nuclease NucT; Provisional 99.31
PRK12452509 cardiolipin synthetase; Reviewed 99.28
PF13091126 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 99.22
cd04047110 C2B_Copine C2 domain second repeat in Copine. Ther 99.21
PF0016885 C2: C2 domain; InterPro: IPR000008 The C2 domain i 99.14
KOG1011 1283 consensus Neurotransmitter release regulator, UNC- 99.13
PF13091126 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 99.1
PLN02223537 phosphoinositide phospholipase C 99.09
cd00030102 C2 C2 domain. The C2 domain was first identified i 99.07
COG50381227 Ca2+-dependent lipid-binding protein, contains C2 99.05
smart00239101 C2 Protein kinase C conserved region 2 (CalB). Ca2 99.04
PLN02952599 phosphoinositide phospholipase C 99.0
PRK01642483 cls cardiolipin synthetase; Reviewed 98.97
KOG1028421 consensus Ca2+-dependent phospholipid-binding prot 98.97
PLN02230598 phosphoinositide phospholipase C 4 98.94
PLN02222581 phosphoinositide phospholipase C 2 98.89
KOG1031 1169 consensus Predicted Ca2+-dependent phospholipid-bi 98.88
PF0061428 PLDc: Phospholipase D Active site motif; InterPro: 98.87
PRK11263411 cardiolipin synthase 2; Provisional 98.86
KOG0169746 consensus Phosphoinositide-specific phospholipase 98.86
PLN02228567 Phosphoinositide phospholipase C 98.85
COG50381227 Ca2+-dependent lipid-binding protein, contains C2 98.8
cd08689109 C2_fungal_Pkc1p C2 domain found in protein kinase 98.8
cd08374133 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferli 98.77
PRK05443 691 polyphosphate kinase; Provisional 98.69
KOG3603 456 consensus Predicted phospholipase D [General funct 98.64
KOG12641267 consensus Phospholipase C [Lipid transport and met 98.59
PRK09428 451 pssA phosphatidylserine synthase; Provisional 98.59
smart0015528 PLDc Phospholipase D. Active site motifs. Phosphat 98.58
KOG1328 1103 consensus Synaptic vesicle protein BAIAP3, involve 98.34
KOG13281103 consensus Synaptic vesicle protein BAIAP3, involve 98.28
PF0061428 PLDc: Phospholipase D Active site motif; InterPro: 98.28
COG1502438 Cls Phosphatidylserine/phosphatidylglycerophosphat 98.2
cd08683143 C2_C2cd3 C2 domain found in C2 calcium-dependent d 97.97
PF07894284 DUF1669: Protein of unknown function (DUF1669); In 97.74
KOG2059800 consensus Ras GTPase-activating protein [Signal tr 97.62
PF13918177 PLDc_3: PLD-like domain 97.62
TIGR03705672 poly_P_kin polyphosphate kinase 1. Members of this 97.61
KOG09051639 consensus Phosphoinositide 3-kinase [Signal transd 97.59
smart0015528 PLDc Phospholipase D. Active site motifs. Phosphat 97.43
KOG3964469 consensus Phosphatidylglycerolphosphate synthase [ 97.36
KOG13261105 consensus Membrane-associated protein FER-1 and re 97.25
PF13918177 PLDc_3: PLD-like domain 97.23
KOG1013362 consensus Synaptic vesicle protein rabphilin-3A [I 97.21
KOG3837523 consensus Uncharacterized conserved protein, conta 97.14
KOG10111283 consensus Neurotransmitter release regulator, UNC- 97.09
PLN02866 1068 phospholipase D 97.07
PF13090352 PP_kinase_C: Polyphosphate kinase C-terminal domai 96.88
KOG2060405 consensus Rab3 effector RIM1 and related proteins, 96.83
KOG1013362 consensus Synaptic vesicle protein rabphilin-3A [I 96.79
KOG13261105 consensus Membrane-associated protein FER-1 and re 96.78
PLN02964644 phosphatidylserine decarboxylase 96.45
KOG1327529 consensus Copine [Signal transduction mechanisms] 96.42
KOG12651189 consensus Phospholipase C [Lipid transport and met 96.13
PF07894284 DUF1669: Protein of unknown function (DUF1669); In 96.07
COG0855696 Ppk Polyphosphate kinase [Inorganic ion transport 95.98
PF11495233 Regulator_TrmB: Archaeal transcriptional regulator 95.93
PF10358143 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; 95.85
cd08684103 C2A_Tac2-N C2 domain first repeat found in Tac2-N 95.78
COG3886198 Predicted HKD family nuclease [DNA replication, re 94.9
KOG1329887 consensus Phospholipase D1 [Lipid transport and me 94.66
cd08398158 C2_PI3K_class_I_alpha C2 domain present in class I 94.26
PF12416340 DUF3668: Cep120 protein; InterPro: IPR022136 This 93.99
PLN02352758 phospholipase D epsilon 93.71
PLN03008868 Phospholipase D delta 92.22
KOG1452442 consensus Predicted Rho GTPase-activating protein 91.87
cd08693173 C2_PI3K_class_I_beta_delta C2 domain present in cl 91.7
PF13090352 PP_kinase_C: Polyphosphate kinase C-terminal domai 90.59
cd08397159 C2_PI3K_class_III C2 domain present in class III p 90.59
PF15627156 CEP76-C2: CEP76 C2 domain 90.55
cd0868798 C2_PKN-like C2 domain in Protein kinase C-like (PK 89.53
PLN02270 808 phospholipase D alpha 89.0
PF15625168 CC2D2AN-C2: CC2D2A N-terminal C2 domain 88.97
cd08380156 C2_PI3K_like C2 domain present in phosphatidylinos 88.89
cd04012171 C2A_PI3K_class_II C2 domain first repeat present i 88.09
PF09565296 RE_NgoFVII: NgoFVII restriction endonuclease; Inte 87.13
PF00792142 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: I 84.42
COG0855 696 Ppk Polyphosphate kinase [Inorganic ion transport 83.74
PF14429184 DOCK-C2: C2 domain in Dock180 and Zizimin proteins 80.82
PF11618107 DUF3250: Protein of unknown function (DUF3250); In 80.02
>PLN03008 Phospholipase D delta Back     alignment and domain information 
Probab=100.00  E-value=4.1e-190  Score=1625.40  Aligned_cols=855  Identities=73%  Similarity=1.231  Sum_probs=779.4

Q ss_pred             CCCCceeEeeceEEEEEEEEeeCCCCCCCCchhhhhcccccccCCCCCCCCccccCCcCcccccccccccCccCCCcEEE
Q 002960            6 DSDKEKVIYLHGDLDLKIIRARRLPNMDMMSEHLRRCFTACDVCKTPAPTHETFQDDDGVRHTSKIIRKSKIITSDPYVT   85 (862)
Q Consensus         6 ~~~~~~~~~l~g~L~v~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dpYv~   85 (862)
                      +..+.++++|||+|+|+|++|++||+||++++.+++|+..+..|.+...+.......++....++.+.+.+..++||||+
T Consensus         3 ~~~~~~~~llhg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tSDPYV~   82 (868)
T PLN03008          3 EKVSEDVMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDKNIRSHRKVITSDPYVT   82 (868)
T ss_pred             cccccceEEeecccEEEEEEcccCCchhHHHHHHHhhcccccccccccccccccccccccccccccccccccCCCCceEE
Confidence            56688999999999999999999999999999899998866655544332222223333333345556677788999999


Q ss_pred             EEECCeEEEeeeeccCCCCCceeeEEEEeecCCCceEEEEEEecCCCCCeeeEEEEEeceeeccCceeEEEEEccCCCCC
Q 002960           86 VVVPQATVARTRVLKNSQEPVWNEHFNIPLAHPLSNLEIQVKDDDVFGAQIIGTAAIPAHTIATGELISRWYDIIAPSGS  165 (862)
Q Consensus        86 v~l~~~~~~rT~vi~~t~~P~Wne~f~~~v~~~~~~l~~~v~d~d~~~~~~iG~~~i~l~~l~~g~~~~~w~~l~~~~~~  165 (862)
                      |.+++++++||+|++++.||+|||+|+|+|+++...|+|+|||+|.+++++||++.||++++..|+.++.|++|++..++
T Consensus        83 I~Lg~~rv~RTrVi~n~~NPvWNE~F~f~vah~~s~L~f~VkD~D~~gaD~IG~a~IPL~~L~~Ge~vd~Wl~Ll~~~~k  162 (868)
T PLN03008         83 VVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAKIPVRDIASGERISGWFPVLGASGK  162 (868)
T ss_pred             EEECCcceeeEEeCCCCCCCCcceeEEEEecCCCceEEEEEEcCCccCCceeEEEEEEHHHcCCCCceEEEEEccccCCC
Confidence            99999889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCceEEEEeeeecCCCCCccccCCCCCCCCCCccccccccccCCceeEeeeccccCCCCCceecCCCCCCCcchHHH
Q 002960          166 PPKPGASIQLELKFTPCDKNPLYRQGIAGDPEHKGVRNAYFPLRKGSHVRLYQDAHVTEGILPEIPLDGGKLYKPGTCWE  245 (862)
Q Consensus       166 ~~~~~g~l~l~l~~~~~~~~~~~~~gi~~g~~~~gvp~s~~p~~~gn~v~l~~d~~~~~~~~p~~~l~~g~~y~~~~~f~  245 (862)
                      +++++++|+|+|+|+|+..++.|.+||++++++.|||.+|||++.||+|+||||||++|||+|.|.|+||+.|+|.+||+
T Consensus       163 p~k~~~kl~v~lqf~pv~~~~~~~~gv~~~~~~~gvp~t~Fp~r~g~~VtlYqdAhv~d~~~p~i~l~~g~~y~~~rcwe  242 (868)
T PLN03008        163 PPKAETAIFIDMKFTPFDQIHSYRCGIAGDPERRGVRRTYFPVRKGSQVRLYQDAHVMDGTLPAIGLDNGKVYEHGKCWE  242 (868)
T ss_pred             CCCCCcEEEEEEEEEEccccccccccccCCcCCCCCCCccccCCCCCEeEEeccCCCCCCCCCccccCCCccccccccHH
Confidence            99999999999999999999999999999899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcccceEEEEEEeeceeEEeecCCCCCCCCCcchHHHHHHHHHHcCCEEEEEEeCCCCcccccccccCCcccC
Q 002960          246 DICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEGVRVLLLVWDDKTSHDKLGVKTPGVMAT  325 (862)
Q Consensus       246 ~l~~aI~~Ak~~I~I~~w~~~~~~~L~R~~~~~~~~g~~~~l~~lL~~kA~rGV~VriLvwd~~~s~~~~~~~~~~~~~~  325 (862)
                      +|++||++||++|||++||++++++|+|++..  +.+++.+|++||++||+|||+|+|||||+.+|+..+++++.|+|.|
T Consensus       243 di~~AI~~Ak~~IyI~gWsl~~ei~L~R~~~~--~~~~~~~Lg~LLk~KA~eGVrV~ilvwdd~ts~~~~~~~~~g~m~t  320 (868)
T PLN03008        243 DICYAISEAHHMIYIVGWSIFHKIKLVRETKV--PRDKDMTLGELLKYKSQEGVRVLLLVWDDKTSHDKFGIKTPGVMGT  320 (868)
T ss_pred             HHHHHHHhhhheEEEeceeecceeEEecCCCC--CCCCCccHHHHHHHHHHCCCEEEEEEeccccccccccccccccccc
Confidence            99999999999999999999999999999863  2223589999999999999999999999999987788899999999


Q ss_pred             CcHHHHhhhcCCCceEEecCCCCCCcccccccc-----------ccccccccccceEEeccCCCCCCcceEEEEcccccc
Q 002960          326 HDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQ-----------IVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLC  394 (862)
Q Consensus       326 ~~~~~~~~l~~~~v~v~~~~~~~~~~~~~~~~~-----------~~~~~~shHqK~vVVD~~~~~~~~~~vafvGG~dl~  394 (862)
                      |+++++++|+|++|.|.++|++++.+.+++++.           ..+++|+||||+||||+++++++|+.+|||||+|||
T Consensus       321 hdeet~~~f~h~~v~~~l~pr~~~~~~~~~~~~~~~~~~iy~~~~~~~~~sHHQK~VVID~~~~~~~r~~vAFvGGiDLc  400 (868)
T PLN03008        321 HDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPIFSIYVMTVVGTLFTHHQKCVLVDTQAVGNNRKVTAFIGGLDLC  400 (868)
T ss_pred             ccHHHHHhhcCCCeeEEECCCccccccchhhccccccccccccccccccccccceEEEEccCCCCCccceEEEEcceecc
Confidence            999999999999999999999988888888773           456889999999999998788889999999999999


Q ss_pred             CcccCCCCcccccCCCcccCCCCCCCCCCCCCCCCCCCcceeeeEEeCHHHHHHHHHHHHHHHhhccchhhhhhcccccc
Q 002960          395 DGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSH  474 (862)
Q Consensus       395 ~~R~Dt~~H~l~~~~~~~~~~d~~n~~~~~~~~~~r~pWhDv~~~v~Gpaa~dl~~~F~~rW~~~~~~~~~~~~~~~~~~  474 (862)
                      +|||||+.|++++++++.|++||+||++.++.+.|++||||+|++|+||+|++|.++|.+||+++++.+++..+.++...
T Consensus       401 ~gRwDT~~H~l~~~l~t~~~~D~~np~~~~~~~~p~~PWHDvh~rVeGPaV~dL~~~F~qRW~~aTg~~~~~~~~k~~~~  480 (868)
T PLN03008        401 DGRYDTPEHRILHDLDTVFKDDFHNPTFPAGTKAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTH  480 (868)
T ss_pred             CCccCCcCCCccccccccccccccCccccCCCCCCCCCeEEEEEEEECHHHHHHHHHHHHHHHHhhCccccccccccccc
Confidence            99999999999999999999999999988888899999999999999999999999999999999987544445566667


Q ss_pred             CccchhhhccccccccCccccccCCCCcccCCCCcccccccCCCCCCeeeEEEeeccCCCCCCCCCCchhhhcccccccc
Q 002960          475 WRDDYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIEDIDDQSLICAK  554 (862)
Q Consensus       475 ~~~~~l~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~vQv~rs~~~~~~~~~p~~~~~~~~~~l~~~~  554 (862)
                      |.++.|+++.++++++.|+....+......+.+.+.++....+++++|.+|+|||++.|++++||+.++++..++|+|+|
T Consensus       481 ~~~d~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~w~vQifRSId~~sa~g~P~~~~~~~~~~l~~gk  560 (868)
T PLN03008        481 WQDDALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGFPKYEDEAEAQHLECAK  560 (868)
T ss_pred             cccchhcchhhcccccCCCccccccccccccCCCCccCccccCCCCccccceeeecCchhhcCCCCCcchhhhhcccccc
Confidence            88999999999999887754322222212222222222222367789999999999999999999999999999999999


Q ss_pred             cccchhHHHHHHHHHHHhccceEEEeecccccccCCCCccccCCcCCccHHHHHHHHHHHHHcCCCeEEEEEecCCCCCC
Q 002960          555 DVVIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVYVIIPMWPEGD  634 (862)
Q Consensus       555 ~~~~e~sI~~ay~~~I~~A~~~IyIenqyF~~~~~~wp~~~~~~~~n~i~~~l~~~i~~~~~~~~~v~V~Ivlp~~Peg~  634 (862)
                      +..+|+||++||+++|++||||||||||||++++++|+.+.+.++.|+|+++|+++|+++++++++|+|+||+|+||||+
T Consensus       561 ~~~ie~SIq~aYi~aIr~A~hFIYIENQYFiss~~~w~~~~~~~~~n~I~~eia~kI~~ki~~~e~f~V~IViP~~peG~  640 (868)
T PLN03008        561 RLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAGADNLIPMELALKIVSKIRAKERFAVYVVIPLWPEGD  640 (868)
T ss_pred             ccchhhhHHHHHHHHHHhhccEEEEehhhhhccccccccccccccccchhHHHHHHHHHHHhCCCCCEEEEEECCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcchhhhhHhHHHHHHHHHHHHHHHHHHcCcCCCCCCcEEEeeCCCcCCCCcccccCCCCcccccccccceeeEEEeE
Q 002960          635 PKTNTVQEILFWQSQTMQMMYSVVAQELREMQVDAHPQDYLSFYCLGKREEAPKDVLANNGDKVSDSQKNQRFMIYVHAK  714 (862)
Q Consensus       635 ~~~~~~~~~~~~~~~t~~~~~~~i~~~L~~~gv~~~p~~yl~~y~l~~~e~~~~~~~~~~~~~~~~~~~~~~~~iyvHSK  714 (862)
                      +.++++|+||+||++||+++|.+|.++|++.|.+.+|.+||+||||||+|...+..++.+++.+..+|++++++||||||
T Consensus       641 ~~sg~vq~Il~wq~~TM~~~~~~I~~~L~~~~~d~~p~dyl~fy~L~~~e~~~~~~~~~~~~~~~~a~~~rr~~IYvHsK  720 (868)
T PLN03008        641 PKSGPVQEILYWQSQTMQMMYDVIAKELKAVQSDAHPLDYLNFYCLGKREQLPDDMPATNGSVVSDSYNFQRFMIYVHAK  720 (868)
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCccCEEEEecccccccccCCCCCCCCchhhhhhhccceeEEEeee
Confidence            99999999999999999999999999999988767899999999999999875444555677777889999999999999


Q ss_pred             EEEEeeeEEEecCcCccccccCCCCCcceEEEeeCCccccccccCCCCchHHHHHHHHHHHhcCCCcccccCCCchHHHH
Q 002960          715 GMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHTWARKLKHPHGQIYGYRKSLWSEHLGMLDNCFEEPESLDCIR  794 (862)
Q Consensus       715 lmIVDD~~~iIGSANln~RSm~g~~DsEi~v~i~d~~~~~~~~~~~~~~~~~~lR~~Lw~eHlG~~~~~~~~p~~~~~~~  794 (862)
                      +|||||++++|||||||+|||.++||+|+++.+++|.++|+++.+.++|+|++||++||+||||+.++.|.+|+|++|++
T Consensus       721 ~~ivDd~~~~iGSaN~n~RS~~~~Rd~E~~~~~~~~~~~~~~~~~~~rg~I~g~R~sLwaEHLG~~~~~~~~p~s~ecv~  800 (868)
T PLN03008        721 GMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSDLECLK  800 (868)
T ss_pred             EEEECCCEEEEeccccCHhhccCCCCceEeEEeccccccccccCcchhhHHHHHHHHHHHHHhCCCHHHccCCCCHHHHH
Confidence            99999999999999999999999999999999999999987667788999999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhhcccccCCCccceeeCCcccCCCCCccCCCCCCCCCCCCCceecccCCCCCCCCCC
Q 002960          795 KVNQIAGENWGRFTAMEFTPLQGHLLRYPLQVDADGTVSPLPGYEQFPDAGGKIIGVHSMSLPDMLTT  862 (862)
Q Consensus       795 ~~~~~a~~n~~~~~~~~~~~~~g~L~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  862 (862)
                      ++|++|++||++|+++++..|+|||+.||+.|+.+|++++|||+++||||+|+|||+++.+||++|||
T Consensus       801 ~vn~~a~~~w~~y~~~~~~~~~ghl~~yp~~v~~~g~v~~l~g~~~fpd~~~~v~g~~~~~lp~~ltt  868 (868)
T PLN03008        801 KVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLTT  868 (868)
T ss_pred             HHHHHHHHHHHHhhccccccCCcccccCceEecCCCcEeeCCCCCcCCCCCCceeccccccCCccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999997

>PLN02270 phospholipase D alpha Back     alignment and domain information
>PLN02352 phospholipase D epsilon Back     alignment and domain information
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism] Back     alignment and domain information
>PLN02866 phospholipase D Back     alignment and domain information
>PRK12452 cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK01642 cls cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK11263 cardiolipin synthase 2; Provisional Back     alignment and domain information
>COG1502 Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>PHA02820 phospholipase-D-like protein; Provisional Back     alignment and domain information
>PRK09428 pssA phosphatidylserine synthase; Provisional Back     alignment and domain information
>PHA03003 palmytilated EEV membrane glycoprotein; Provisional Back     alignment and domain information
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD) Back     alignment and domain information
>PF12357 PLD_C: Phospholipase D C terminal ; InterPro: IPR024632 Phospholipase D (PLD) catalyses the hydrolysis of the phosphodiester bond of glycerophospholipids to generate phosphatidic acid and a free head group Back     alignment and domain information
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip) Back     alignment and domain information
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family Back     alignment and domain information
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset Back     alignment and domain information
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) Back     alignment and domain information
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I Back     alignment and domain information
>PRK05443 polyphosphate kinase; Provisional Back     alignment and domain information
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3 Back     alignment and domain information
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1) Back     alignment and domain information
>TIGR03705 poly_P_kin polyphosphate kinase 1 Back     alignment and domain information
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset Back     alignment and domain information
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset Back     alignment and domain information
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins Back     alignment and domain information
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein Back     alignment and domain information
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset Back     alignment and domain information
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) Back     alignment and domain information
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon Back     alignment and domain information
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4 Back     alignment and domain information
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins Back     alignment and domain information
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42) Back     alignment and domain information
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) Back     alignment and domain information
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins Back     alignment and domain information
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) Back     alignment and domain information
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4 Back     alignment and domain information
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] Back     alignment and domain information
>cd08677 C2A_Synaptotagmin-13 C2 domain Back     alignment and domain information
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin Back     alignment and domain information
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family Back     alignment and domain information
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins Back     alignment and domain information
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>cd04046 C2_Calpain C2 domain present in Calpain proteins Back     alignment and domain information
>cd08375 C2_Intersectin C2 domain present in Intersectin Back     alignment and domain information
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone Back     alignment and domain information
>KOG3603 consensus Predicted phospholipase D [General function prediction only] Back     alignment and domain information
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins Back     alignment and domain information
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10 Back     alignment and domain information
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8 Back     alignment and domain information
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2 Back     alignment and domain information
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group Back     alignment and domain information
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins Back     alignment and domain information
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins Back     alignment and domain information
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin Back     alignment and domain information
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins Back     alignment and domain information
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins Back     alignment and domain information
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5 Back     alignment and domain information
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin Back     alignment and domain information
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3 Back     alignment and domain information
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1) Back     alignment and domain information
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins Back     alignment and domain information
>cd04041 C2A_fungal C2 domain first repeat; fungal group Back     alignment and domain information
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) Back     alignment and domain information
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3) Back     alignment and domain information
>cd08680 C2_Kibra C2 domain found in Human protein Kibra Back     alignment and domain information
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins Back     alignment and domain information
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins Back     alignment and domain information
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins Back     alignment and domain information
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD) Back     alignment and domain information
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7 Back     alignment and domain information
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins Back     alignment and domain information
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11 Back     alignment and domain information
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene Back     alignment and domain information
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13 Back     alignment and domain information
>cd00138 PLDc Phospholipase D Back     alignment and domain information
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain Back     alignment and domain information
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin Back     alignment and domain information
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins Back     alignment and domain information
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12 Back     alignment and domain information
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17 Back     alignment and domain information
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1 Back     alignment and domain information
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP) Back     alignment and domain information
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus) Back     alignment and domain information
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs) Back     alignment and domain information
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4 Back     alignment and domain information
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16 Back     alignment and domain information
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4 Back     alignment and domain information
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC) Back     alignment and domain information
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 Back     alignment and domain information
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7 Back     alignment and domain information
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma Back     alignment and domain information
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase Back     alignment and domain information
>cd04032 C2_Perforin C2 domain of Perforin Back     alignment and domain information
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin Back     alignment and domain information
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15 Back     alignment and domain information
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein Back     alignment and domain information
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>PHA02820 phospholipase-D-like protein; Provisional Back     alignment and domain information
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins Back     alignment and domain information
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17 Back     alignment and domain information
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1) Back     alignment and domain information
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 Back     alignment and domain information
>PRK13912 nuclease NucT; Provisional Back     alignment and domain information
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin Back     alignment and domain information
>cd04048 C2A_Copine C2 domain first repeat in Copine Back     alignment and domain information
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] Back     alignment and domain information
>cd00138 PLDc Phospholipase D Back     alignment and domain information
>PHA03003 palmytilated EEV membrane glycoprotein; Provisional Back     alignment and domain information
>PRK13912 nuclease NucT; Provisional Back     alignment and domain information
>PRK12452 cardiolipin synthetase; Reviewed Back     alignment and domain information
>PF13091 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 1BYR_A 1V0T_A 1V0U_A 1V0V_A 1V0S_A 1V0R_A 1V0W_A Back     alignment and domain information
>cd04047 C2B_Copine C2 domain second repeat in Copine Back     alignment and domain information
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking Back     alignment and domain information
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13091 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 1BYR_A 1V0T_A 1V0U_A 1V0V_A 1V0S_A 1V0R_A 1V0W_A Back     alignment and domain information
>PLN02223 phosphoinositide phospholipase C Back     alignment and domain information
>cd00030 C2 C2 domain Back     alignment and domain information
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>smart00239 C2 Protein kinase C conserved region 2 (CalB) Back     alignment and domain information
>PLN02952 phosphoinositide phospholipase C Back     alignment and domain information
>PRK01642 cls cardiolipin synthetase; Reviewed Back     alignment and domain information
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PLN02230 phosphoinositide phospholipase C 4 Back     alignment and domain information
>PLN02222 phosphoinositide phospholipase C 2 Back     alignment and domain information
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] Back     alignment and domain information
>PF00614 PLDc: Phospholipase D Active site motif; InterPro: IPR001736 Phosphatidylcholine-hydrolysing phospholipase D (PLD) isoforms are activated by ADP-ribosylation factors (ARFs) Back     alignment and domain information
>PRK11263 cardiolipin synthase 2; Provisional Back     alignment and domain information
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] Back     alignment and domain information
>PLN02228 Phosphoinositide phospholipase C Back     alignment and domain information
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae Back     alignment and domain information
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin Back     alignment and domain information
>PRK05443 polyphosphate kinase; Provisional Back     alignment and domain information
>KOG3603 consensus Predicted phospholipase D [General function prediction only] Back     alignment and domain information
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism] Back     alignment and domain information
>PRK09428 pssA phosphatidylserine synthase; Provisional Back     alignment and domain information
>smart00155 PLDc Phospholipase D Back     alignment and domain information
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] Back     alignment and domain information
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] Back     alignment and domain information
>PF00614 PLDc: Phospholipase D Active site motif; InterPro: IPR001736 Phosphatidylcholine-hydrolysing phospholipase D (PLD) isoforms are activated by ADP-ribosylation factors (ARFs) Back     alignment and domain information
>COG1502 Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins Back     alignment and domain information
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] Back     alignment and domain information
>PF13918 PLDc_3: PLD-like domain Back     alignment and domain information
>TIGR03705 poly_P_kin polyphosphate kinase 1 Back     alignment and domain information
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] Back     alignment and domain information
>smart00155 PLDc Phospholipase D Back     alignment and domain information
>KOG3964 consensus Phosphatidylglycerolphosphate synthase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF13918 PLDc_3: PLD-like domain Back     alignment and domain information
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only] Back     alignment and domain information
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PLN02866 phospholipase D Back     alignment and domain information
>PF13090 PP_kinase_C: Polyphosphate kinase C-terminal domain; PDB: 2O8R_A 1XDP_A 1XDO_B Back     alignment and domain information
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PLN02964 phosphatidylserine decarboxylase Back     alignment and domain information
>KOG1327 consensus Copine [Signal transduction mechanisms] Back     alignment and domain information
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism] Back     alignment and domain information
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>COG0855 Ppk Polyphosphate kinase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF11495 Regulator_TrmB: Archaeal transcriptional regulator TrmB; InterPro: IPR021586 TrmB is an alpha-glucoside sensing transcriptional regulator Back     alignment and domain information
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen [] Back     alignment and domain information
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus) Back     alignment and domain information
>COG3886 Predicted HKD family nuclease [DNA replication, recombination, and repair] Back     alignment and domain information
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism] Back     alignment and domain information
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length Back     alignment and domain information
>PLN02352 phospholipase D epsilon Back     alignment and domain information
>PLN03008 Phospholipase D delta Back     alignment and domain information
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms] Back     alignment and domain information
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>PF13090 PP_kinase_C: Polyphosphate kinase C-terminal domain; PDB: 2O8R_A 1XDP_A 1XDO_B Back     alignment and domain information
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>PF15627 CEP76-C2: CEP76 C2 domain Back     alignment and domain information
>cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins Back     alignment and domain information
>PLN02270 phospholipase D alpha Back     alignment and domain information
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain Back     alignment and domain information
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>PF09565 RE_NgoFVII: NgoFVII restriction endonuclease; InterPro: IPR019065 There are four classes of restriction endonucleases: types I, II,III and IV Back     alignment and domain information
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2 Back     alignment and domain information
>COG0855 Ppk Polyphosphate kinase [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A Back     alignment and domain information
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query862
1rlw_A126 Phospholipase A2, CALB domain; hydrolase, C2 domai 9e-19
2fk9_A157 Protein kinase C, ETA type; ATP-binding, metal-bin 3e-17
1gmi_A136 Protein kinase C, epsilon type; PKC, C2 domain, X- 4e-17
1wfj_A136 Putative elicitor-responsive gene; C2 domain, rike 2e-16
1v0w_A506 Phospholipase D; hydrolase, substrate SOAK, dibuty 2e-16
2dmh_A140 Myoferlin; beta-sandwich, FER-1-like protein 3, mu 3e-16
2ep6_A133 MCTP2 protein; beta sandwich, Ca2+ binding, membra 1e-15
3b7y_A153 E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- 3e-14
3m7f_B176 E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 4e-13
2nq3_A173 Itchy homolog E3 ubiquitin protein ligase; C2 doma 3e-12
2r83_A284 Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel 2e-11
2r83_A284 Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel 6e-07
2dmg_A142 KIAA1228 protein; beta-sandwich, structural genomi 2e-11
3pyc_A132 E3 ubiquitin-protein ligase smurf1; phospholipid b 3e-11
1wfm_A138 Synaptotagmin XIII; C2 domain, exocytosis, neurotr 9e-11
2cjt_A131 UNC-13 homolog A, MUNC13-1; phorbol-ester binding, 1e-10
1cjy_A749 CPLA2, protein (cytosolic phospholipase A2); lipid 1e-10
3f04_A143 Synaptotagmin-1; C2A, calcium, cell junction, cyto 2e-10
3kwu_A148 MUNC13-1; calcium binding protein, phospholipid bi 2e-10
2z0u_A155 WW domain-containing protein 1; C2 domain, alterna 2e-10
3fdw_A148 Synaptotagmin-like protein 4; structural genomics, 2e-10
1rsy_A152 Synaptotagmin I; calcium/phospholipid binding prot 3e-10
1a25_A149 CALB, protein kinase C (beta); calcium++/phospholi 6e-10
1v27_A141 Regulating synaptic membrane exocytosis protein 2; 1e-09
1dqv_A296 Synaptotagmin III; beta sandwich, calcium ION, C2 1e-09
1dqv_A296 Synaptotagmin III; beta sandwich, calcium ION, C2 3e-07
2d8k_A141 Synaptotagmin VII; exocytosis, calcium binding, ly 3e-09
2b3r_A134 Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA 3e-09
2enp_A147 B/K protein; C2 type 1,beta sandwich, structural g 3e-09
3rdl_A137 Protein kinase C alpha type; protein kinase PKC, t 7e-09
1rh8_A142 Piccolo protein; beta-sandwich, metal binding prot 8e-09
3l9b_A144 Otoferlin; C2-domain, beta-sheets, cell membrane, 1e-08
1ugk_A138 Synaptotagmin IV, KIAA1342; beta sandwich, structu 2e-08
3fbk_A153 RGS3, RGP3, regulator of G-protein signaling 3; al 2e-08
1w15_A153 Synaptotagmin IV; metal binding protein, endocytos 3e-08
2chd_A142 Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium 3e-08
2cjs_A167 UNC-13 homolog A, MUNC13-1; neurotransmitter trans 3e-08
2bwq_A129 Regulating synaptic membrane exocytosis protein 2; 9e-08
3n5a_A138 Synaptotagmin-7; calcium/phospholipid binding prot 9e-08
2q3x_A171 Regulating synaptic membrane exocytosis protein 1; 9e-08
1tjx_A159 Similar to synaptotagmini/P65; C2B domain, calcium 2e-07
2cm5_A166 Rabphilin-3A; protein transport, zinc-finger, Ca2+ 2e-07
3hsi_A458 Phosphatidylserine synthase; CDP- diacylglycerol-- 3e-07
3nsj_A540 Perforin-1; pore forming protein, immune system; H 3e-05
3bxj_A483 RAS GTPase-activating protein syngap; GTPase activ 7e-05
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 6e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Length = 126 Back     alignment and structure
 Score = 82.0 bits (203), Expect = 9e-19
 Identities = 28/108 (25%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 79  TSDPYVTVVVPQA--TVARTRVLKNSQEPVWNEHFNIPLAHPLSN-LEIQVKDDDVFGAQ 135
           T DPYV + +     +  RTR   N   PVWNE F   L     N LEI + D +    +
Sbjct: 26  TPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYVMDE 85

Query: 136 IIGTAAIPAHTIATGELISRWYDIIAPSGSPPKPGASIQLELKFTPCD 183
            +GTA     ++  GE     +               + LE+      
Sbjct: 86  TLGTATFTVSSMKVGEKKEVPFIF--------NQVTEMVLEMSLEVAS 125
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Length = 157 Back     alignment and structure
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Length = 136 Back     alignment and structure
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Length = 136 Back     alignment and structure
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Length = 506 Back     alignment and structure
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 140 Back     alignment and structure
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Length = 133 Back     alignment and structure
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Length = 153 Back     alignment and structure
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176 Back     alignment and structure
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Length = 173 Back     alignment and structure
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 Back     alignment and structure
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 Back     alignment and structure
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 142 Back     alignment and structure
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Length = 132 Back     alignment and structure
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 Back     alignment and structure
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Length = 131 Back     alignment and structure
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Length = 749 Back     alignment and structure
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Length = 143 Back     alignment and structure
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} PDB: 3kwt_A* Length = 148 Back     alignment and structure
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Length = 155 Back     alignment and structure
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Length = 148 Back     alignment and structure
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Length = 152 Back     alignment and structure
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Length = 149 Back     alignment and structure
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 141 Back     alignment and structure
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 Back     alignment and structure
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 Back     alignment and structure
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 141 Back     alignment and structure
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Length = 134 Back     alignment and structure
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 147 Back     alignment and structure
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Length = 142 Back     alignment and structure
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} Length = 144 Back     alignment and structure
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 Back     alignment and structure
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} Length = 153 Back     alignment and structure
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Length = 153 Back     alignment and structure
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Length = 142 Back     alignment and structure
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Length = 167 Back     alignment and structure
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Length = 129 Back     alignment and structure
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Length = 138 Back     alignment and structure
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Length = 171 Back     alignment and structure
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Length = 159 Back     alignment and structure
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Length = 166 Back     alignment and structure
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Length = 458 Back     alignment and structure
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Length = 540 Back     alignment and structure
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Length = 483 Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Length = 155 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query862
1v0w_A506 Phospholipase D; hydrolase, substrate SOAK, dibuty 100.0
3hsi_A458 Phosphatidylserine synthase; CDP- diacylglycerol-- 99.97
1xdp_A687 Polyphosphate kinase; PPK, PPK complex with AMPPNP 99.85
2o8r_A705 Polyphosphate kinase; structural genomics, protein 99.81
2fk9_A157 Protein kinase C, ETA type; ATP-binding, metal-bin 99.81
2dmh_A140 Myoferlin; beta-sandwich, FER-1-like protein 3, mu 99.77
1gmi_A136 Protein kinase C, epsilon type; PKC, C2 domain, X- 99.76
2ep6_A133 MCTP2 protein; beta sandwich, Ca2+ binding, membra 99.76
3b7y_A153 E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- 99.76
1wfj_A136 Putative elicitor-responsive gene; C2 domain, rike 99.75
3kwu_A148 MUNC13-1; calcium binding protein, phospholipid bi 99.75
3m7f_B176 E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 99.74
1rlw_A126 Phospholipase A2, CALB domain; hydrolase, C2 domai 99.71
2nq3_A173 Itchy homolog E3 ubiquitin protein ligase; C2 doma 99.69
3pyc_A132 E3 ubiquitin-protein ligase smurf1; phospholipid b 99.69
4ggj_A196 Mitochondrial cardiolipin hydrolase; piRNA pathway 99.66
2b3r_A134 Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA 99.66
1rsy_A152 Synaptotagmin I; calcium/phospholipid binding prot 99.63
1a25_A149 CALB, protein kinase C (beta); calcium++/phospholi 99.62
2q3x_A171 Regulating synaptic membrane exocytosis protein 1; 99.62
3f04_A143 Synaptotagmin-1; C2A, calcium, cell junction, cyto 99.62
2r83_A284 Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel 99.62
3rdl_A137 Protein kinase C alpha type; protein kinase PKC, t 99.61
2d8k_A141 Synaptotagmin VII; exocytosis, calcium binding, ly 99.61
1rh8_A142 Piccolo protein; beta-sandwich, metal binding prot 99.6
3fdw_A148 Synaptotagmin-like protein 4; structural genomics, 99.6
2z0u_A155 WW domain-containing protein 1; C2 domain, alterna 99.6
2bwq_A129 Regulating synaptic membrane exocytosis protein 2; 99.6
1v27_A141 Regulating synaptic membrane exocytosis protein 2; 99.58
3fbk_A153 RGS3, RGP3, regulator of G-protein signaling 3; al 99.58
1wfm_A138 Synaptotagmin XIII; C2 domain, exocytosis, neurotr 99.58
2chd_A142 Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium 99.57
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 99.56
3n5a_A138 Synaptotagmin-7; calcium/phospholipid binding prot 99.56
1tjx_A159 Similar to synaptotagmini/P65; C2B domain, calcium 99.56
2cm5_A166 Rabphilin-3A; protein transport, zinc-finger, Ca2+ 99.55
2dmg_A142 KIAA1228 protein; beta-sandwich, structural genomi 99.54
1ugk_A138 Synaptotagmin IV, KIAA1342; beta sandwich, structu 99.54
1w15_A153 Synaptotagmin IV; metal binding protein, endocytos 99.54
2enp_A147 B/K protein; C2 type 1,beta sandwich, structural g 99.53
4gel_A220 Mitochondrial cardiolipin hydrolase; piRNA, phosph 99.5
3l9b_A144 Otoferlin; C2-domain, beta-sheets, cell membrane, 99.5
1dqv_A296 Synaptotagmin III; beta sandwich, calcium ION, C2 99.48
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 99.47
2cjt_A131 UNC-13 homolog A, MUNC13-1; phorbol-ester binding, 99.45
4ggj_A196 Mitochondrial cardiolipin hydrolase; piRNA pathway 99.44
1djx_A624 PLC-D1, phosphoinositide-specific phospholipase C, 99.42
3jzy_A510 Intersectin 2; C2 domain, structural genomics cons 99.4
3nsj_A540 Perforin-1; pore forming protein, immune system; H 99.4
2cjs_A167 UNC-13 homolog A, MUNC13-1; neurotransmitter trans 99.38
3bxj_A483 RAS GTPase-activating protein syngap; GTPase activ 99.37
2r83_A284 Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel 99.32
1cjy_A749 CPLA2, protein (cytosolic phospholipase A2); lipid 99.29
1dqv_A296 Synaptotagmin III; beta sandwich, calcium ION, C2 99.21
4gel_A220 Mitochondrial cardiolipin hydrolase; piRNA, phosph 99.11
1xdp_A687 Polyphosphate kinase; PPK, PPK complex with AMPPNP 99.04
3qr0_A816 Phospholipase C-beta (PLC-beta); PH domain, EF han 99.02
3ohm_B885 1-phosphatidylinositol-4,5-bisphosphate phosphodi 99.02
2zkm_X799 1-phosphatidylinositol-4,5-bisphosphate phosphodie 99.0
3pfq_A674 PKC-B, PKC-beta, protein kinase C beta type; phosp 98.98
1yrk_A126 NPKC-delta, protein kinase C, delta type; C2 domai 98.96
2enj_A138 NPKC-theta, protein kinase C theta type; beta-sand 98.9
3hsi_A458 Phosphatidylserine synthase; CDP- diacylglycerol-- 98.71
1v0w_A 506 Phospholipase D; hydrolase, substrate SOAK, dibuty 98.68
2o8r_A 705 Polyphosphate kinase; structural genomics, protein 98.08
3qph_A342 TRMB, A global transcription regulator; transcript 95.1
3qph_A342 TRMB, A global transcription regulator; transcript 94.29
2f5t_X233 Archaeal transcriptional regulator TRMB; sugar-bin 94.14
3l4c_A220 Dedicator of cytokinesis protein 1; DOCK180, DOCK1 83.47
2yrb_A156 Protein fantom; beta sandwich, NPPSFA, national pr 82.22
2c1l_A 358 Restriction endonuclease; BFII, domain fusion, hyd 81.3
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Back     alignment and structure
Probab=100.00  E-value=3.5e-34  Score=334.12  Aligned_cols=388  Identities=16%  Similarity=0.117  Sum_probs=205.5

Q ss_pred             chHHHHHHHHHHhcccceEEEEEEe-eceeEEeecCCCCCCCCCcchHHHHHHHHHHcC--CEEEEEEeCCCCccccccc
Q 002960          241 GTCWEDICHAISEAHHLIYIVGWSV-FHKIKLIREQTRPLPRGGDLTLGELLKYKSEEG--VRVLLLVWDDKTSHDKLGV  317 (862)
Q Consensus       241 ~~~f~~l~~aI~~Ak~~I~I~~w~~-~~~~~L~R~~~~~~~~g~~~~l~~lL~~kA~rG--V~VriLvwd~~~s~~~~~~  317 (862)
                      .++|++|+++|++||++|+|+.|++ .++-             .+.+|.++|.+||+||  |+||||+ |..++....  
T Consensus        65 ~~~~~~l~~~I~~Ak~~I~i~~y~~~~~d~-------------~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~--  128 (506)
T 1v0w_A           65 KRLLAKMTENIGNATRTVDISTLAPFPNGA-------------FQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMN--  128 (506)
T ss_dssp             HHHHHHHHHHHHTCSSEEEEEEESSCCCHH-------------HHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCC--
T ss_pred             HHHHHHHHHHHHHhccEEEEEEeeccCCCh-------------HHHHHHHHHHHHHhCCCCcEEEEEE-eCccccccc--
Confidence            6789999999999999999999984 5431             1368999999999999  9999998 654332100  


Q ss_pred             ccCCcccCCcHHHHhhhcCCCceEEecCCCCCCccccccccccccccccccceEEeccCCCCCCcceEEEEccccccCcc
Q 002960          318 KTPGVMATHDEETKKFFKHSSVNCVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGR  397 (862)
Q Consensus       318 ~~~~~~~~~~~~~~~~l~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~shHqK~vVVD~~~~~~~~~~vafvGG~dl~~~R  397 (862)
                             ..+....+.|+..|+++...  .+.....+ .. ....+.+||+|++|||++        +||+||+||+.++
T Consensus       129 -------~~~~~~~~~L~~~g~~~~~~--~~~~~~~~-~~-~~~~~~r~H~K~~ViD~~--------~a~~Gg~Nl~~d~  189 (506)
T 1v0w_A          129 -------VIPSKYRDELTAKLGKAAEN--ITLNVASM-TT-SKTAFSWNHSKILVVDGQ--------SALTGGINSWKDD  189 (506)
T ss_dssp             -------CHHHHHHHHHHHHHGGGGGG--EEEEEEEE-CS-BTTTTBCBCCCEEEETTT--------EEEEESCCCCHHH
T ss_pred             -------cCCHHHHHHHHhcccceeec--Cccccccc-cc-cCCccccceeeEEEECCc--------EEEeeccccCccc
Confidence                   00223444455444432100  00000000 00 001124899999999998        9999999998767


Q ss_pred             cCCCCcccccCCCcccCCCCCCCCCCCCCCCCCCCcceeeeEEeCHHHHHHHHHHHHHHHhhccchhhhhhccccccCcc
Q 002960          398 YDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKLTELTFKFKRVSHWRD  477 (862)
Q Consensus       398 ~Dt~~H~l~~~~~~~~~~d~~n~~~~~~~~~~r~pWhDv~~~v~Gpaa~dl~~~F~~rW~~~~~~~~~~~~~~~~~~~~~  477 (862)
                      |.+.                            ..+|||++++++||+|.++.+.|.++|+.......   .+.  ..|..
T Consensus       190 y~~~----------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~~~~---~~~--~~~~~  236 (506)
T 1v0w_A          190 YLDT----------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKS---NIA--SVWFA  236 (506)
T ss_dssp             HTSS----------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTTT---STT--TEEEE
T ss_pred             cccC----------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhccccC---Chh--hhccc
Confidence            7531                            14899999999999999999999999987643210   000  00000


Q ss_pred             chhhhccccccccCccccccCCCCcccCCCCcccccccCCCCCCeeeEEEeeccCCCCCCCCCCchh-----hhcccccc
Q 002960          478 DYLIKIGRISWILSPELSLKTNGTTIVPRDDNVVRVSKEDDPENWHVQIFRSIDSGSVKGFPKSIED-----IDDQSLIC  552 (862)
Q Consensus       478 ~~l~~~~~~~~~~~p~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~vQv~rs~~~~~~~~~p~~~~~-----~~~~~l~~  552 (862)
                      ..- ....++.. ...         ..|..        ....+...+|+............|.....     +...-+++
T Consensus       237 ~~~-~~~~~~~~-~~~---------~~p~~--------~~~~~~~~~~~~~~~~~~i~~~~P~~~~~~~~w~~~~~~~~~  297 (506)
T 1v0w_A          237 ASG-NAGCMPTM-HKD---------TNPKA--------SPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVV  297 (506)
T ss_dssp             EST-TCCCCTTH-HHH---------HSCSS--------CCCCSSEEEEEEECCCSSSCSCCTTCCCCCCCCCCSSSCSST
T ss_pred             ccc-ccccCchh-ccc---------cCccc--------CcccccccceecccccceeecCCccccccccCcccccceeec
Confidence            000 00000000 000         00100        00012222222211000000000110000     00000111


Q ss_pred             ccc-----c---cchhHHHHHHHHHHHhccceEEEeecccccccCCCCccccCCcCCccHHHHHHHHHHHHHcCCCeEEE
Q 002960          553 AKD-----V---VIDKSIQTAYIQAIRSAQHFIYIENQYFLGSSYAWPSYKNAGADNLIPMELALKIASKIRANERFAVY  624 (862)
Q Consensus       553 ~~~-----~---~~e~sI~~ay~~~I~~A~~~IyIenqyF~~~~~~wp~~~~~~~~n~i~~~l~~~i~~~~~~~~~v~V~  624 (862)
                      ..+     .   ..+.++.++|+++|.+||++|||++|||.+--.  |..       .....+..+|.++.++  ||+|+
T Consensus       298 d~P~~~~~~~~~~~~~~~~~~~~~~I~~A~~~I~I~tq~~~pyf~--p~~-------~~~~~i~~aL~~Aa~r--GV~Vr  366 (506)
T 1v0w_A          298 GLHDNTNADRDYDTVNPEESALRALVASAKGHIEISQQDLNATCP--PLP-------RYDIRLYDALAAKMAA--GVKVR  366 (506)
T ss_dssp             TCCCTTTSCHHHHHHCHHHHHHHHHHHTCSSEEEEEESCSSCCTT--TSC-------SCCHHHHHHHHHHHHT--TCEEE
T ss_pred             cccccccCcccccccccHHHHHHHHHhCcCcEEEEEecccccccc--Ccc-------cchHHHHHHHHHHHhC--CCcEE
Confidence            100     0   114679999999999999999999976654210  100       0123667777777664  59999


Q ss_pred             EEecCCCCCCCCCcc----hhhhhHhHHHHHHHHHHHHHHHHHHcCc-CC--CCCCcEEEeeCCCcCCCCcccccCCCCc
Q 002960          625 VIIPMWPEGDPKTNT----VQEILFWQSQTMQMMYSVVAQELREMQV-DA--HPQDYLSFYCLGKREEAPKDVLANNGDK  697 (862)
Q Consensus       625 Ivlp~~Peg~~~~~~----~~~~~~~~~~t~~~~~~~i~~~L~~~gv-~~--~p~~yl~~y~l~~~e~~~~~~~~~~~~~  697 (862)
                      ||+|..+........    ...++.. ...+..     ...|.+.|+ +.  .+...+++|.++.....           
T Consensus       367 Il~~~~~~~~~~~~a~~~~~~~L~~~-~~~l~~-----gv~ll~~g~~e~~~~~~~~l~i~~~~~~~~~-----------  429 (506)
T 1v0w_A          367 IVVSDPANRGAVGSGGYSQIKSLSEI-SDTLRN-----RLANITGGQQAAKTAMCSNLQLATFRSSPNG-----------  429 (506)
T ss_dssp             EEECCGGGCC------CCCCSCTHHH-HHHHHH-----HHHHHHTSHHHHHHHHHHHEEEEECCSSSSS-----------
T ss_pred             EEeCCCCchHHHHHhHHHHHHHHHHh-hhhhcc-----cchhcccccchhccccccceeeeeccccCcc-----------
Confidence            999976521110000    0000000 000000     011112221 00  00001334433221000           


Q ss_pred             ccccccc-cceeeEEEeEEEEEeeeEEEecCcCccccccCCCCCcceEEEeeCCccc
Q 002960          698 VSDSQKN-QRFMIYVHAKGMIVDDEYVIMGSANINQRSMAGSKDTEIAMGSYQPHHT  753 (862)
Q Consensus       698 ~~~~~~~-~~~~iyvHSKlmIVDD~~~iIGSANln~RSm~g~~DsEi~v~i~d~~~~  753 (862)
                           .+ .....++|+|+|||||++++|||+|||.|||     +|+++.|++++++
T Consensus       430 -----~~~~~~~~~lHaK~~vvD~~~~~vGS~N~d~rS~-----~E~~l~i~~~~~a  476 (506)
T 1v0w_A          430 -----KWADGHPYAQHHKLVSVDSSTFYIGSKNLYPSWL-----QDFGYIVESPEAA  476 (506)
T ss_dssp             -----SCTTSCCCCBCCEEEEETTTEEEEESCCSSCCCS-----BCEEEEEECHHHH
T ss_pred             -----ccccCccccceEEEEEECCcEEEEeCCCCCCcch-----hhceeEecCHHHH
Confidence                 00 0124689999999999999999999999999     5999999998544
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Back     alignment and structure
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A* Back     alignment and structure
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 Back     alignment and structure
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Back     alignment and structure
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Back     alignment and structure
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Back     alignment and structure
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Back     alignment and structure
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Back     alignment and structure
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A* Back     alignment and structure
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Back     alignment and structure
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Back     alignment and structure
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Back     alignment and structure
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Back     alignment and structure
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A Back     alignment and structure
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Back     alignment and structure
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Back     alignment and structure
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Back     alignment and structure
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Back     alignment and structure
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Back     alignment and structure
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Back     alignment and structure
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Back     alignment and structure
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Back     alignment and structure
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Back     alignment and structure
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0 Back     alignment and structure
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Back     alignment and structure
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Back     alignment and structure
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Back     alignment and structure
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Back     alignment and structure
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Back     alignment and structure
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A Back     alignment and structure
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} Back     alignment and structure
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Back     alignment and structure
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Back     alignment and structure
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A Back     alignment and structure
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Back     alignment and structure
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B Back     alignment and structure
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Back     alignment and structure
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Back     alignment and structure
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Back     alignment and structure
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Back     alignment and structure
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Back     alignment and structure
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A Back     alignment and structure
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A* Back     alignment and structure
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Back     alignment and structure
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Back     alignment and structure
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Back     alignment and structure
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Back     alignment and structure
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A Back     alignment and structure
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens} Back     alignment and structure
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Back     alignment and structure
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Back     alignment and structure
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 Back     alignment and structure
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus} Back     alignment and structure
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus} Back     alignment and structure
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5 Back     alignment and structure
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens} Back     alignment and structure
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1 Back     alignment and structure
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 862
d1v0wa1258 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces 3e-11
d1v0wa1258 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces 4e-05
d1wfja_136 b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cr 6e-11
d1v0wa2246 d.136.1.2 (A:264-514) Phospholipase D {Streptomyce 3e-10
d1rlwa_126 b.7.1.1 (A:) Domain from cytosolic phospholipase A 7e-10
d1gmia_136 b.7.1.1 (A:) Domain from protein kinase C epsilon 2e-09
d2cjta1128 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus no 3e-08
d2bwqa1125 b.7.1.2 (A:729-853) Regulating synaptic membrane e 7e-08
d1a25a_132 b.7.1.2 (A:) C2 domain from protein kinase c (beta 4e-07
d1rsya_143 b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu 7e-07
d1bdya_123 b.7.1.1 (A:) Domain from protein kinase C delta {R 9e-07
d1w15a_138 b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegi 4e-06
d2ep6a1126 b.7.1.1 (A:92-217) Multiple C2 and transmembrane d 2e-05
d1qasa2131 b.7.1.1 (A:626-756) PI-specific phospholipase C is 3e-05
d1rh8a_142 b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [Tax 3e-05
d2cm5a1137 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat ( 4e-05
d1uowa_157 b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu 7e-05
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 258 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Phospholipase D/nuclease
superfamily: Phospholipase D/nuclease
family: Phospholipase D
domain: Phospholipase D
species: Streptomyces sp. [TaxId: 1931]

 Score = 62.4 bits (151), Expect = 3e-11
 Identities = 32/237 (13%), Positives = 58/237 (24%), Gaps = 64/237 (27%)

Query: 228 PEIPLDGGKLYKPGT--CWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDL 285
           P    D     + GT      +   I  A   + I   + F                   
Sbjct: 48  PGCWGDDKCADRVGTKRLLAKMTENIGNATRTVDISTLAPFPNGAFQDA----------- 96

Query: 286 TLGELLKYKSEEGVRV-LLLVWDDKTSHDKLGVKTPGVMATHDEETKKFFKHSSVNCVLA 344
            +   LK  + +G ++ + ++      +          M     + +             
Sbjct: 97  -IVAGLKESAAKGNKLKVRILVGAAPVYH---------MNVIPSKYRDELTAKLGKAAEN 146

Query: 345 PRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLCDGRYDTPEHR 404
                + ++  K         +H K ++VD Q        +A  GGI+     Y    H 
Sbjct: 147 ITLNVASMTTSK----TAFSWNHSKILVVDGQ--------SALTGGINSWKDDYLDTTH- 193

Query: 405 LFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATK 461
                                      P  D+   L GPAA       +  W    +
Sbjct: 194 ---------------------------PVSDVDLALTGPAAGSAGRYLDTLWTWTCQ 223
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 258 Back     information, alignment and structure
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 136 Back     information, alignment and structure
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 246 Back     information, alignment and structure
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 Back     information, alignment and structure
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Length = 136 Back     information, alignment and structure
>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 128 Back     information, alignment and structure
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Length = 125 Back     information, alignment and structure
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 132 Back     information, alignment and structure
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 143 Back     information, alignment and structure
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 123 Back     information, alignment and structure
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 Back     information, alignment and structure
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 Back     information, alignment and structure
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131 Back     information, alignment and structure
>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 142 Back     information, alignment and structure
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 137 Back     information, alignment and structure
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 157 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query862
d1v0wa1258 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.89
d2ep6a1126 Multiple C2 and transmembrane domain-containing pr 99.77
d1gmia_136 Domain from protein kinase C epsilon {Rat (Rattus 99.75
d1wfja_136 C2 domain protein At1g63220 {Thale cress (Arabidop 99.72
d1rlwa_126 Domain from cytosolic phospholipase A2 {Human (Hom 99.69
d2nq3a1133 E3 ubiquitin-protein ligase Itchy {Human (Homo sap 99.66
d1a25a_132 C2 domain from protein kinase c (beta) {Rat (Rattu 99.65
d2cjta1128 Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 99.63
d1qasa2131 PI-specific phospholipase C isozyme D1 (PLC-D1), C 99.62
d1rsya_143 Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 99.6
d1rh8a_142 Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} 99.57
d1v0wa2246 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.57
d1dqva1130 Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 99.52
d1w15a_138 Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 99.5
d2bwqa1125 Regulating synaptic membrane exocytosis protein, r 99.49
d2cm5a1137 C2b-domain of rabphilin {Rat (Rattus norvegicus) [ 99.46
d1wfma_138 Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9 99.45
d1uowa_157 Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 99.44
d1byra_152 Nuclease Nuc {Salmonella typhimurium [TaxId: 90371 99.43
d1ugka_138 Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 99.43
d1bdya_123 Domain from protein kinase C delta {Rat (Rattus no 99.41
d1byra_152 Nuclease Nuc {Salmonella typhimurium [TaxId: 90371 99.36
d1dqva2145 Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 99.34
d2zkmx2122 Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI 99.34
d1v0wa2246 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.3
d1v0wa1258 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.28
d2o8ra3188 Polyphosphate kinase, PPK {Porphyromonas gingivali 95.22
d2o8ra3188 Polyphosphate kinase, PPK {Porphyromonas gingivali 95.16
d1xdpa3187 Polyphosphate kinase, PPK {Escherichia coli [TaxId 94.89
d1xdpa3187 Polyphosphate kinase, PPK {Escherichia coli [TaxId 94.74
d1xdpa4187 Polyphosphate kinase, PPK {Escherichia coli [TaxId 93.89
d2o8ra4186 Polyphosphate kinase, PPK {Porphyromonas gingivali 92.44
d1e7ua2174 Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) 88.51
d2o8ra4186 Polyphosphate kinase, PPK {Porphyromonas gingivali 80.3
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Phospholipase D/nuclease
superfamily: Phospholipase D/nuclease
family: Phospholipase D
domain: Phospholipase D
species: Streptomyces sp. [TaxId: 1931]

Probab=99.89  E-value=4.1e-24  Score=223.71  Aligned_cols=156  Identities=19%  Similarity=0.176  Sum_probs=113.6

Q ss_pred             chHHHHHHHHHHhcccceEEEEEEeeceeEEeecCCCCCCCCCcchHHHHHHHHHHcC--CEEEEEEeCCCCcccccccc
Q 002960          241 GTCWEDICHAISEAHHLIYIVGWSVFHKIKLIREQTRPLPRGGDLTLGELLKYKSEEG--VRVLLLVWDDKTSHDKLGVK  318 (862)
Q Consensus       241 ~~~f~~l~~aI~~Ak~~I~I~~w~~~~~~~L~R~~~~~~~~g~~~~l~~lL~~kA~rG--V~VriLvwd~~~s~~~~~~~  318 (862)
                      +++|++|.++|++||++|+|+.|++.++-.            ....|.++|++||+||  |+||||+ |..++....   
T Consensus        63 ~~~~~~~~~~I~~A~~~I~i~~~~~~pd~~------------~~~~i~~aL~~aA~rG~~V~VriL~-d~~gs~~~~---  126 (258)
T d1v0wa1          63 KRLLAKMTENIGNATRTVDISTLAPFPNGA------------FQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMN---  126 (258)
T ss_dssp             HHHHHHHHHHHHTCSSEEEEEEESSCCCHH------------HHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCC---
T ss_pred             HHHHHHHHHHHHHhccEEEEEEEEEcCCch------------HHHHHHHHHHHHHhCCCCeEEEEEe-CCccccccc---
Confidence            678999999999999999999998766411            1268999999999999  9999997 877664310   


Q ss_pred             cCCcccCCcHHHHhhhcCCCce----EEecCCCCCCccccccccccccccccccceEEeccCCCCCCcceEEEEcccccc
Q 002960          319 TPGVMATHDEETKKFFKHSSVN----CVLAPRYASSKLSYFKQQIVGTIFTHHQKCVLVDTQASGNNRKITAFIGGIDLC  394 (862)
Q Consensus       319 ~~~~~~~~~~~~~~~l~~~~v~----v~~~~~~~~~~~~~~~~~~~~~~~shHqK~vVVD~~~~~~~~~~vafvGG~dl~  394 (862)
                            ......++.|...+++    +.+......        .....+.+||+|++|||++        +|||||+||+
T Consensus       127 ------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~~~rnH~Ki~VVDg~--------~a~vGG~Ni~  184 (258)
T d1v0wa1         127 ------VIPSKYRDELTAKLGKAAENITLNVASMT--------TSKTAFSWNHSKILVVDGQ--------SALTGGINSW  184 (258)
T ss_dssp             ------CHHHHHHHHHHHHHGGGGGGEEEEEEEEC--------SBTTTTBCBCCCEEEETTT--------EEEEESCCCC
T ss_pred             ------cchHHHHHHHHHhccceeecccccccccc--------ccccccccccceEEEEcCC--------EEEECCcccC
Confidence                  0011233333322222    211100000        0112346899999999998        9999999999


Q ss_pred             CcccCCCCcccccCCCcccCCCCCCCCCCCCCCCCCCCcceeeeEEeCHHHHHHHHHHHHHHHhhccc
Q 002960          395 DGRYDTPEHRLFRDLDTVFKDDFHNPTYPIGTKAPREPWHDLHCRLDGPAAYDVLINFEQRWRKATKL  462 (862)
Q Consensus       395 ~~R~Dt~~H~l~~~~~~~~~~d~~n~~~~~~~~~~r~pWhDv~~~v~Gpaa~dl~~~F~~rW~~~~~~  462 (862)
                      +++|+...                            .||||++++|+||+|.++.+.|.++|+.+++.
T Consensus       185 ~~~~~~~~----------------------------~~w~D~~~~v~Gp~v~~~~~~F~~~W~~~~~e  224 (258)
T d1v0wa1         185 KDDYLDTT----------------------------HPVSDVDLALTGPAAGSAGRYLDTLWTWTCQN  224 (258)
T ss_dssp             HHHHTSSS----------------------------SCCBEEEEEEESHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccccCCC----------------------------CCeeeeEEEEECHHHHHHHHHHHHHHHHHhCC
Confidence            99986422                            47999999999999999999999999988765
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Back     information, alignment and structure
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure
>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure
>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure
>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure