Citrus Sinensis ID: 003030

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-----
MVQHAAENEKKPTGADVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEANAKETFEREETERRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQGAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTMDESGTGTGQEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQVDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSVTLTSKDKDAERVKRQRELEIERLRRIEEEREREREREKDRMAVDIATLEARERAFAEARERAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAERAAVERATVEARERAAEKAMAERGAFDARERVDRIFSEKFSASSRNSAVRPSSSSSDLQDQKSQSASSFSSSRYPYSSGYVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRYH
ccccccHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHcccHHHHHcccccHHHHHHHHHHHHHHcHHHHHHHHHHccHHHHHHHHHHccccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccHHcccHHHHHHHHHHHHHccccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccc
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHHHHccccHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccccccccccccEEEccccHHHccccccccccccccccccccccccEccHEEcccccccccccccHcccccEEEEcccHHHcccccEEEcccccccccHcccccccccccccccccccHHccccccccccccccccccccccccccEccccccccccccccccccHccccccccccEEccccccccccccccccHHHHcHcccccccccccccHccccccccccccccccccccHcccccccccEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcHcHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHHHcHccccccccHHHcccHHHHHHHHHHHEEEEccHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccc
mvqhaaenekkptgadvpekheNLVKDYCKESKFEGQRVMkhrgieqplretnrsmgnetrfeepcdtaaNGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEANAKETFEREETERRLQVEQDIEEIGKKltgaheneeTRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDEYGkklkmaegpqlfkkgkdmasgkacmlddnvnLRVTRLASQQevntekeevtqgafadegnveiqignsdselegeavettnvlddrkfEVFGLAHGNLKQEECKLEMkdvaepfcedhcaqtmdesgtgtgqekttsglqpdastknQEKKFANEWGERENNIKQTQVDvglnqkldqdkfmptQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSVtltskdkdaERVKRQRELEIERLRRIEEEREREREREKDRMAVDIATLEARERAFAEARERAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAERAAVERATVEARERAAEKAMAERGAFDARERVDRIFSEKfsassrnsavrpsssssdlqdqksqsassfsssrypyssgyvasinaersdgiegeSAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVkrwssgkegNLRALLSTLQYilgpdsgwhpiplteVITSAAVKKAYRKAtlcvhpdklqqRGASIQQKYICEKVFDLLKVSLLLSCRYH
mvqhaaenekkptgadvpekhenLVKDYCKeskfegqrvmkhrgieqplretnrsmgnetrfeepcdtaangrrlreageqiedekkvkkaldqednekvlmedseqedinlveanereenMRKVKEAleqvesektlkEACEQGDAEKRLRKALEQeanaketfereeterrlqveqDIEEIGKkltgaheneetrkslgqvcEQVDNFETLYeahgrreenEMRFREALEkeastnfsqearveteksfkdageakdlkelnkaheknqwdeygkklKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLAsqqevntekeevtqgafadegnVEIQIgnsdselegEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTMDEsgtgtgqekttsglqpdastknQEKKFAnewgerennikqTQVDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQsanaseslerreknvsvtltskdkdaervkrqreleierlrrieeererererekdrmavdiatlEARERAFAEARERAERAAVERATAEFRQRALAEARERLEKACAEakekslaektsmeaRLRAERAAVERATVEARERAAEKamaergafdarerVDRIFsekfsassrnsavrpsssssdlqdqksqsassfsssrypySSGYVASINaersdgiegesAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLaetldadvkrwssgkegnLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRYH
MVQHAAENEKKPTGADVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEANAKetfereeterrLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQGAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTMDESGTGTGQEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQVDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSVTLTSKDKDAERVKRQreleierlrrieeerererereKDRMAVDIATLearerafaeareraeraaverataefrqralaearerlekacaeakekslaekTSMearlraeraaveratveareraaekamaergaFDARERVDRIFSEKFsassrnsavrpsssssdlqdqksqsassfsssrypyssgyVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRYH
***********************************************************************************************************************************************************************************************************C*QVDNFETL**************************************************************************************CMLDDNVNLRV********************************************TTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCE**********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************GNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR**
***********************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************LLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRYH
***************DVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEA***************QVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALE********************DAGEAKDLKELNKAHEKNQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLAS************QGAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTM*****************************ANEWGERENNIKQTQVDVGLNQKLDQDKFMPTQLV*********************************************VTLTSKDKDAERVKRQRELEIERLRRIEE***********RMAVDIATLEARERAF*****************EFRQRALAEARERLE************************************************AFDARERVDRIFSEK************************************YSSGYVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRYH
************************VKDYCKESKFEG***********P*R********ETRFEEPCDTA*NGRRLREAGEQIEDEKKVKKALDQEDNEKVLMEDS*QEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEKRLRKALEQEANAKETFEREETERRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRR**NEMRFREALEKEASTNFSQEARVETEKSFKDA***KDLKE*************GKKLKMAEGPQLFKKG*******AC*********VTRLAS**********V*QG******NVEIQIGNSD******AVETTNVL***********************************************************************************************************************************************************************************************AVDIATLEARERAFAEARERAERAAVERATAEFRQR*****************************************************************************************************************************************L*RHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRYH
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MVQHAAENEKKPTGADVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRxxxxxxxxxxxxxxxxxxxxxDNEKVLMEDSEQEDINxxxxxxxxxxxxxxxxxxxxxxxxKTxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEKNQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQGAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEPFCEDHCAQTMDESGTGTGQEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQVDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSVTLTSKDKDxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxMAVDxxxxxxxxxxxxxxxxxxxxxxxxRATxxxxxxxxxxxxxxxxxxxxxxxxxxxxEKTSMEARLRAERAAVERATVEARERAAEKAMAERGAFDARERVDRIFSEKFSASSRNSAVRPSSSSSDLQDQKSQSASSFSSSRYPYSSGYVASINAERSDGIEGESxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCRYH
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query855 2.2.26 [Sep-21-2011]
Q0WQ57891 Auxilin-related protein 2 no no 0.156 0.150 0.686 3e-49
Q9SU08904 Auxilin-related protein 1 no no 0.156 0.148 0.686 5e-49
O13773697 UBA domain-containing pro yes no 0.129 0.159 0.393 1e-14
Q99KY41305 Cyclin-G-associated kinas no no 0.119 0.078 0.366 2e-08
P978741305 Cyclin-G-associated kinas no no 0.119 0.078 0.358 6e-08
O149761311 Cyclin-G-associated kinas no no 0.119 0.077 0.355 2e-07
>sp|Q0WQ57|AUXI2_ARATH Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1 Back     alignment and function desciption
 Score =  197 bits (501), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 92/134 (68%), Positives = 117/134 (87%)

Query: 712 IEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKRWSS 771
           ++GE+ +R +ARLERH+RT ERAAKALAEKN RDL  QREQAE++R+  TLD +++RW +
Sbjct: 746 VDGETEERRRARLERHQRTQERAAKALAEKNERDLQVQREQAEKDRIGGTLDVEIRRWGA 805

Query: 772 GKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASI 831
           GKEGNLRALLSTLQY+L P+ GW P+ LT++IT A+VKK YRKATLC+HPDK+QQ+GA++
Sbjct: 806 GKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKATLCIHPDKVQQKGANL 865

Query: 832 QQKYICEKVFDLLK 845
           QQKYI EKVFD+LK
Sbjct: 866 QQKYIAEKVFDMLK 879
Promotes probably uncoating of clathrin-coated vesicles.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9SU08|AUXI1_ARATH Auxilin-related protein 1 OS=Arabidopsis thaliana GN=At4g12780 PE=1 SV=2 Back     alignment and function description
>sp|O13773|UCP7_SCHPO UBA domain-containing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp7 PE=4 SV=1 Back     alignment and function description
>sp|Q99KY4|GAK_MOUSE Cyclin-G-associated kinase OS=Mus musculus GN=Gak PE=1 SV=2 Back     alignment and function description
>sp|P97874|GAK_RAT Cyclin-G-associated kinase OS=Rattus norvegicus GN=Gak PE=2 SV=1 Back     alignment and function description
>sp|O14976|GAK_HUMAN Cyclin-G-associated kinase OS=Homo sapiens GN=GAK PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query855
225430706 1458 PREDICTED: uncharacterized protein LOC10 0.969 0.568 0.522 1e-170
297735127 1455 unnamed protein product [Vitis vinifera] 0.966 0.567 0.518 1e-169
224134248 1462 predicted protein [Populus trichocarpa] 0.883 0.516 0.497 1e-153
255561088 1551 auxilin, putative [Ricinus communis] gi| 0.808 0.445 0.514 1e-150
356559382447 PREDICTED: uncharacterized protein LOC10 0.472 0.903 0.642 1e-133
356495390 1404 PREDICTED: uncharacterized protein LOC10 0.423 0.257 0.642 1e-116
449451541 1402 PREDICTED: uncharacterized protein LOC10 0.417 0.254 0.614 1e-105
449522766 1372 PREDICTED: uncharacterized LOC101221934 0.417 0.260 0.614 1e-105
224094819 1234 predicted protein [Populus trichocarpa] 0.833 0.577 0.410 1e-101
240256182 1422 chaperone DnaJ-domain containing protein 0.360 0.216 0.617 1e-100
>gi|225430706|ref|XP_002266275.1| PREDICTED: uncharacterized protein LOC100244517 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  606 bits (1562), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 461/883 (52%), Positives = 596/883 (67%), Gaps = 54/883 (6%)

Query: 7    ENEKKPTGADVPEKHENLVKDYCKESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPC 66
            E E K   AD  E+H+ L++   K+++ E +  MK    E+ L+E     GNE + ++  
Sbjct: 575  EAEHKLNVADEWEEHDILIEIQQKQNEVEVKEAMKQEN-ERKLKEAKERTGNERKLKKAR 633

Query: 67   DTAANGRRLREAGEQIEDEKKVK-------KALDQEDNEKV---------------LMED 104
            +   + +RL+EA EQ E EKK+K       +AL  ++NEK                +  D
Sbjct: 634  ENEKSEKRLKEALEQEETEKKLKAENEKRLEALKWQENEKKKKEAREREENERRLKVALD 693

Query: 105  SEQEDINLVEANEREENMRKVKEALEQVESEKTLKEA-------------CEQGDAEKRL 151
             E+ +    EA EREEN +++K+A+EQ E+EK LKEA             CE+ + +KRL
Sbjct: 694  WEENEKKQKEACEREENEKRLKQAIEQEENEKRLKEALKQEQILKKQKEACEREENDKRL 753

Query: 152  RKALEQEANAKETFEREETERRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDNFE 211
            ++ALE E N K+   ++  E+RL+   + EEI KKL  A E EE  K    V  Q ++  
Sbjct: 754  KEALEHEENEKK---QKAHEKRLKEACEREEIEKKLKDAREREEIEKRRKDVHRQAEDKR 810

Query: 212  TLYEAHGRREENEMRFREALEKEASTNFSQEARV--ETEKSFKDAGEAKDLKELNKAHEK 269
             L + H R+E +E R  E  E E +    +EA    E+EK   D+G+ ++LK L KAH++
Sbjct: 811  RLNKTHERKE-SEKRLEEMPEWEETDKRLKEATKLEESEKRPGDSGDVEELKGLKKAHDQ 869

Query: 270  NQWDEYGKKLKMAEGPQL-FKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQ 328
               +E  KKLK  +G     ++    A+ +AC L +N N++  ++A + EVN+   E  Q
Sbjct: 870  IV-NENEKKLKSCQGTYAQMEENNFKATDEACKLHENKNIQAAQVAPKYEVNSL--EANQ 926

Query: 329  GAFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAE 388
             A   E  ++I   +     + +AVE  N+L +  FE  G+A G+ +QE+ K+ M +   
Sbjct: 927  EALGQEEKLKIAAESQGIHKDFKAVEMENILVEEIFEASGMADGDAEQEKNKIRMDNSTG 986

Query: 389  PFCEDHCAQTMDESGTGTG-----QEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQ 443
                D   +   E+G G G      EK     Q  ++ ++ +K F +EWGE E ++KQT 
Sbjct: 987  SVLLDENVKKSLEAGIGIGIGQAHLEKNLRAAQMASNPEDLKKNFTSEWGEGEKSMKQT- 1045

Query: 444  VDVGLNQKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERR 503
              V    +  +DKF P+Q++KE  +NG+K+EAAQ + L  KG+IQKTAQ  +  +S E++
Sbjct: 1046 -SVSFEPEDSKDKFRPSQVLKEWVENGKKVEAAQTATLEGKGNIQKTAQQVSNGQSTEKK 1104

Query: 504  EKNVSVTLT-SKDKDAERVKRQRELEIERLRRIEEEREREREREKDRMAVDIATLEARER 562
            EKN++ T T  + +  ER+KR+RELE +RLR++EEEREREREREKDRMAVD AT EAR+R
Sbjct: 1105 EKNINETPTLEEREREERMKRERELEKDRLRKLEEEREREREREKDRMAVDRATREARDR 1164

Query: 563  AFAEARERAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAERA 622
            A+ EARERAERAAVE+ATAE RQRAL EARERLEKACAEA+EK+L++KTS+EARLRAERA
Sbjct: 1165 AYVEARERAERAAVEKATAEARQRALTEARERLEKACAEAREKTLSDKTSIEARLRAERA 1224

Query: 623  AVERATVEARERAAEKAMAERGAFDARERVDRIFSEKFSASSRNSAVRPSSSSSDLQDQK 682
            AVERAT EARERA EKAMAE+   DARER++R  S+KFSASSRNS +R SSSSSDLQD +
Sbjct: 1225 AVERATAEARERAFEKAMAEKAVSDARERMERSVSDKFSASSRNSGLRQSSSSSDLQDLQ 1284

Query: 683  SQSASSFSSSRYPYSSGYVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKN 742
            SQS  S S SRYPYSS Y AS N E+S+G+EGESAQRCKARLER+RRTA+RAAKALAEKN
Sbjct: 1285 SQSTGSSSGSRYPYSSVYGASYNTEKSEGVEGESAQRCKARLERYRRTADRAAKALAEKN 1344

Query: 743  MRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEV 802
             RDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGW PIPLT+V
Sbjct: 1345 KRDLLAQREQAERNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDV 1404

Query: 803  ITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLK 845
            IT+ AVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLK
Sbjct: 1405 ITAVAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLK 1447

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297735127|emb|CBI17489.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224134248|ref|XP_002327792.1| predicted protein [Populus trichocarpa] gi|222836877|gb|EEE75270.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255561088|ref|XP_002521556.1| auxilin, putative [Ricinus communis] gi|223539234|gb|EEF40827.1| auxilin, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356559382|ref|XP_003547978.1| PREDICTED: uncharacterized protein LOC100776448 [Glycine max] Back     alignment and taxonomy information
>gi|356495390|ref|XP_003516561.1| PREDICTED: uncharacterized protein LOC100817245 [Glycine max] Back     alignment and taxonomy information
>gi|449451541|ref|XP_004143520.1| PREDICTED: uncharacterized protein LOC101221934 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449522766|ref|XP_004168397.1| PREDICTED: uncharacterized LOC101221934 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224094819|ref|XP_002310250.1| predicted protein [Populus trichocarpa] gi|222853153|gb|EEE90700.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|240256182|ref|NP_195370.5| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] gi|332661266|gb|AEE86666.1| chaperone DnaJ-domain containing protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query855
TAIR|locus:21152451422 AT4G36520 [Arabidopsis thalian 0.160 0.096 0.846 3.8e-87
TAIR|locus:20184621448 AUL1 "AT1G75310" [Arabidopsis 0.167 0.098 0.748 2.2e-59
TAIR|locus:2135778904 AT4G12780 [Arabidopsis thalian 0.164 0.155 0.659 1.4e-56
TAIR|locus:2135763891 AT4G12770 [Arabidopsis thalian 0.163 0.157 0.664 3.9e-54
TAIR|locus:2036967523 AT1G21660 [Arabidopsis thalian 0.156 0.256 0.567 4e-38
TAIR|locus:2037256651 JAC1 "J-domain protein require 0.113 0.149 0.55 2.9e-23
DICTYBASE|DDB_G0271058 1528 vilC "villin-like protein C" [ 0.483 0.270 0.240 1.3e-15
TAIR|locus:2009817455 AT1G30280 [Arabidopsis thalian 0.133 0.250 0.391 3.8e-15
DICTYBASE|DDB_G0270864963 DDB_G0270864 "unknown" [Dictyo 0.569 0.505 0.219 7.8e-14
POMBASE|SPAC17A5.12697 ucp7 "UBA/TPR/DNAJ domain prot 0.163 0.200 0.349 9.5e-14
TAIR|locus:2115245 AT4G36520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 601 (216.6 bits), Expect = 3.8e-87, Sum P(3) = 3.8e-87
 Identities = 116/137 (84%), Positives = 127/137 (92%)

Query:   709 SDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAERNRLAETLDADVKR 768
             S G EGES QR  +RLERH+RTA+R AKALAEKNMRDL+AQREQAER R+AETLD +VKR
Sbjct:  1275 SHGTEGESPQRYTSRLERHQRTADRVAKALAEKNMRDLVAQREQAERIRIAETLDTEVKR 1334

Query:   769 WSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRG 828
             WSSGKEGN+RALLSTLQYILGP+SGW P+PLTEVITSAAVK+AYRKATLCVHPDKLQQRG
Sbjct:  1335 WSSGKEGNIRALLSTLQYILGPESGWQPLPLTEVITSAAVKRAYRKATLCVHPDKLQQRG 1394

Query:   829 ASIQQKYICEKVFDLLK 845
             A+I QKYICEKVFDLLK
Sbjct:  1395 ANIHQKYICEKVFDLLK 1411
GO:0031072 "heat shock protein binding" evidence=IEA
TAIR|locus:2018462 AUL1 "AT1G75310" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135778 AT4G12780 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135763 AT4G12770 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2036967 AT1G21660 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037256 JAC1 "J-domain protein required for chloroplast accumulation response 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0271058 vilC "villin-like protein C" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2009817 AT1G30280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0270864 DDB_G0270864 "unknown" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
POMBASE|SPAC17A5.12 ucp7 "UBA/TPR/DNAJ domain protein Ucp7" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query855
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 2e-08
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 2e-06
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 4e-06
PTZ00121 2084 PTZ00121, PTZ00121, MAEBL; Provisional 2e-05
PRK09510387 PRK09510, tolA, cell envelope integrity inner memb 2e-05
TIGR02680 1353 TIGR02680, TIGR02680, TIGR02680 family protein 3e-04
PRK02224880 PRK02224, PRK02224, chromosome segregation protein 3e-04
TIGR02794346 TIGR02794, tolA_full, TolA protein 5e-04
pfam02463 1162 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain 6e-04
TIGR021681179 TIGR02168, SMC_prok_B, chromosome segregation prot 0.001
PRK05035695 PRK05035, PRK05035, electron transport complex pro 0.001
PRK00409782 PRK00409, PRK00409, recombination and DNA strand e 0.002
PRK00409782 PRK00409, PRK00409, recombination and DNA strand e 0.002
PRK05035695 PRK05035, PRK05035, electron transport complex pro 0.003
PRK12704 520 PRK12704, PRK12704, phosphodiesterase; Provisional 0.003
PTZ001212084 PTZ00121, PTZ00121, MAEBL; Provisional 0.004
COG3064387 COG3064, TolA, Membrane protein involved in colici 0.004
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information 
 Score = 58.2 bits (140), Expect = 2e-08
 Identities = 141/739 (19%), Positives = 272/739 (36%), Gaps = 73/739 (9%)

Query: 30   KESKFEGQRVMKHRGIEQPLRETNRSMGNETRFEEPCDTAANGRRLREAGEQIEDEKKVK 89
            KE     +   +  G  +  ++T      E R  E     A   R  E   + ED +K +
Sbjct: 1084 KEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAE 1143

Query: 90   KALDQEDNEKVLMEDSEQEDINLVEANEREENMRKVKEALEQVESEKTLKEACEQGDAEK 149
            +A   ED ++V +   + ED    E   + E+ +K + A +  E  K  +E  +  DA K
Sbjct: 1144 EARKAEDAKRVEIA-RKAEDARKAEEARKAEDAKKAEAARKAEEVRKA-EELRKAEDARK 1201

Query: 150  RLRKALEQEANAKETFEREETERRLQVEQDIEEIGKKLTGAHENEETRKSLGQVCEQVDN 209
                   +E    E   + E  ++ +  +  EE  K    A + EE R +     E++  
Sbjct: 1202 AEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNN-----EEIRK 1256

Query: 210  FETLYEAHGRREENEMRFREALEKEASTNFSQEARVETEKSFKDAGEAKDLKELNKAHEK 269
            FE    AH  R +  ++  EA + +                 K A E K   E  KA EK
Sbjct: 1257 FEEARMAHFARRQAAIKAEEARKAD---------------ELKKAEEKKKADEAKKAEEK 1301

Query: 270  NQWDEYGKKLKMAEGPQLFKKGKDMASGKACMLDDNVNLRVTRLASQQEVNTEKEEVTQG 329
             + DE  KK + A+     KK  + A  KA    D    +        E    + E    
Sbjct: 1302 KKADEAKKKAEEAKKADEAKKKAEEAKKKA----DAAKKKAEEAKKAAEAAKAEAE---- 1353

Query: 330  AFADEGNVEIQIGNSDSELEGEAVETTNVLDDRKFEVFGLAHGNLKQEECKLEMKDVAEP 389
            A ADE     +   +  + + EA +  +    +  E         K EE K +  ++ + 
Sbjct: 1354 AAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKA 1413

Query: 390  FCEDHCAQTMDESGTGTGQEKTTSGLQPDASTKNQEKKFANEWGERENNIKQTQVDVGLN 449
                  A    +      +         +A  K +E K A+E  ++    K+ +      
Sbjct: 1414 AAAKKKADEAKKKAEEKKKAD-------EAKKKAEEAKKADEAKKKAEEAKKAE-----E 1461

Query: 450  QKLDQDKFMPTQLVKESAQNGRKMEAAQQSMLGRKGSIQKTAQSANASESLERREKNVSV 509
             K   ++       K+ A+  +K + A++     K    +  ++A A +  +  +K    
Sbjct: 1462 AKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521

Query: 510  TLTSKDKDAERVKRQRELEIERLRRIEEEREREREREKDRMAVDIATLEARERAFAEARE 569
                + K AE  K+  E +         + E +++ ++ + A ++   E +++A    + 
Sbjct: 1522 KKADEAKKAEEAKKADEAK---------KAEEKKKADELKKAEELKKAEEKKKAEEAKKA 1572

Query: 570  RAERAAVERATAEFRQRALAEARERLEKACAEAKEKSLAEKTSMEARLRAE---RAAVER 626
              ++    R   E ++   A   E ++    E K K+   K + EA+++AE   +A  E+
Sbjct: 1573 EEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEK 1632

Query: 627  ATVEARERAAEKAMAERGAFDARERVDRIFSEKFSASSRNSAVRPSSSSSDLQDQKSQSA 686
              VE  ++   +   +       E  ++I + + +  +     +   +    +D+K  + 
Sbjct: 1633 KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAA- 1691

Query: 687  SSFSSSRYPYSSGYVASINAERSDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDL 746
                               A + +  E + A+  K +    ++ AE   KA  E  ++  
Sbjct: 1692 ------------------EALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAE 1733

Query: 747  LAQREQAERNRLAETLDAD 765
             A++E  E  + AE    D
Sbjct: 1734 EAKKEAEEDKKKAEEAKKD 1752

Length = 2084
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|236545 PRK09510, tolA, cell envelope integrity inner membrane protein TolA; Provisional Back     alignment and domain information
>gnl|CDD|233973 TIGR02680, TIGR02680, TIGR02680 family protein Back     alignment and domain information
>gnl|CDD|179385 PRK02224, PRK02224, chromosome segregation protein; Provisional Back     alignment and domain information
>gnl|CDD|234017 TIGR02794, tolA_full, TolA protein Back     alignment and domain information
>gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain Back     alignment and domain information
>gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type Back     alignment and domain information
>gnl|CDD|235334 PRK05035, PRK05035, electron transport complex protein RnfC; Provisional Back     alignment and domain information
>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed Back     alignment and domain information
>gnl|CDD|234750 PRK00409, PRK00409, recombination and DNA strand exchange inhibitor protein; Reviewed Back     alignment and domain information
>gnl|CDD|235334 PRK05035, PRK05035, electron transport complex protein RnfC; Provisional Back     alignment and domain information
>gnl|CDD|237177 PRK12704, PRK12704, phosphodiesterase; Provisional Back     alignment and domain information
>gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional Back     alignment and domain information
>gnl|CDD|225606 COG3064, TolA, Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 855
KOG0431453 consensus Auxilin-like protein and related protein 100.0
smart0027160 DnaJ DnaJ molecular chaperone homology domain. 98.55
cd0625755 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho 98.52
KOG0713 336 consensus Molecular chaperone (DnaJ superfamily) [ 98.5
COG0484 371 DnaJ DnaJ-class molecular chaperone with C-termina 98.48
PRK09430267 djlA Dna-J like membrane chaperone protein; Provis 98.44
PF0022664 DnaJ: DnaJ domain; InterPro: IPR001623 The prokary 98.38
PRK14288 369 chaperone protein DnaJ; Provisional 98.32
PRK09510387 tolA cell envelope integrity inner membrane protei 98.31
PRK14296 372 chaperone protein DnaJ; Provisional 98.19
PRK14279 392 chaperone protein DnaJ; Provisional 98.17
PRK14285 365 chaperone protein DnaJ; Provisional 98.16
KOG0691 296 consensus Molecular chaperone (DnaJ superfamily) [ 98.13
KOG0718 546 consensus Molecular chaperone (DnaJ superfamily) [ 98.1
PRK14299 291 chaperone protein DnaJ; Provisional 98.1
PRK14295 389 chaperone protein DnaJ; Provisional 98.09
PRK14286 372 chaperone protein DnaJ; Provisional 98.09
PRK14277 386 chaperone protein DnaJ; Provisional 98.09
PRK10767 371 chaperone protein DnaJ; Provisional 98.09
PRK14283 378 chaperone protein DnaJ; Provisional 98.07
PRK14294 366 chaperone protein DnaJ; Provisional 98.05
PRK10266 306 curved DNA-binding protein CbpA; Provisional 98.05
PRK14281 397 chaperone protein DnaJ; Provisional 98.03
PRK14280 376 chaperone protein DnaJ; Provisional 98.02
PRK14276 380 chaperone protein DnaJ; Provisional 98.02
PRK14297 380 chaperone protein DnaJ; Provisional 98.02
PRK14301 373 chaperone protein DnaJ; Provisional 98.01
PRK14287 371 chaperone protein DnaJ; Provisional 97.99
PTZ00037 421 DnaJ_C chaperone protein; Provisional 97.99
PRK14282 369 chaperone protein DnaJ; Provisional 97.98
KOG0717 508 consensus Molecular chaperone (DnaJ superfamily) [ 97.97
PRK14298 377 chaperone protein DnaJ; Provisional 97.93
KOG0716 279 consensus Molecular chaperone (DnaJ superfamily) [ 97.91
PRK14290 365 chaperone protein DnaJ; Provisional 97.91
PHA03102153 Small T antigen; Reviewed 97.86
COG2214 237 CbpA DnaJ-class molecular chaperone [Posttranslati 97.84
PRK05014 171 hscB co-chaperone HscB; Provisional 97.8
PRK14289 386 chaperone protein DnaJ; Provisional 97.78
PTZ00100116 DnaJ chaperone protein; Provisional 97.71
PTZ00341 1136 Ring-infected erythrocyte surface antigen; Provisi 97.64
KOG1150 250 consensus Predicted molecular chaperone (DnaJ supe 97.64
PRK00294 173 hscB co-chaperone HscB; Provisional 97.59
KOG0719 264 consensus Molecular chaperone (DnaJ superfamily) [ 97.59
KOG0720 490 consensus Molecular chaperone (DnaJ superfamily) [ 97.58
PRK03578 176 hscB co-chaperone HscB; Provisional 97.57
PRK01356 166 hscB co-chaperone HscB; Provisional 97.51
TIGR00714 157 hscB Fe-S protein assembly co-chaperone HscB. This 97.49
KOG0715 288 consensus Molecular chaperone (DnaJ superfamily) [ 97.43
KOG0721230 consensus Molecular chaperone (DnaJ superfamily) [ 97.42
KOG0550486 consensus Molecular chaperone (DnaJ superfamily) [ 97.4
COG3064387 TolA Membrane protein involved in colicin uptake [ 97.06
PHA02624 647 large T antigen; Provisional 97.0
COG5407 610 SEC63 Preprotein translocase subunit Sec63 [Intrac 96.74
KOG0712 337 consensus Molecular chaperone (DnaJ superfamily) [ 96.71
PRK09510387 tolA cell envelope integrity inner membrane protei 96.51
KOG0714 306 consensus Molecular chaperone (DnaJ superfamily) [ 96.43
PRK14284 391 chaperone protein DnaJ; Provisional 96.37
COG3064387 TolA Membrane protein involved in colicin uptake [ 96.33
PRK14300 372 chaperone protein DnaJ; Provisional 96.31
TIGR02794346 tolA_full TolA protein. TolA couples the inner mem 96.15
PRK14291 382 chaperone protein DnaJ; Provisional 96.15
PRK14278 378 chaperone protein DnaJ; Provisional 96.07
PRK01773 173 hscB co-chaperone HscB; Provisional 96.01
TIGR02349 354 DnaJ_bact chaperone protein DnaJ. This model repre 95.94
PTZ00121 2084 MAEBL; Provisional 95.93
PRK14293 374 chaperone protein DnaJ; Provisional 95.87
PRK14292 371 chaperone protein DnaJ; Provisional 95.71
KOG1789 2235 consensus Endocytosis protein RME-8, contains DnaJ 95.46
KOG0722 329 consensus Molecular chaperone (DnaJ superfamily) [ 95.43
COG5269 379 ZUO1 Ribosome-associated chaperone zuotin [Transla 95.17
KOG0723112 consensus Molecular chaperone (DnaJ superfamily) [ 93.79
KOG0624504 consensus dsRNA-activated protein kinase inhibitor 92.89
TIGR02794346 tolA_full TolA protein. TolA couples the inner mem 92.85
TIGR03835 871 termin_org_DnaJ terminal organelle assembly protei 92.23
COG1076174 DjlA DnaJ-domain-containing proteins 1 [Posttransl 91.14
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=4e-39  Score=356.16  Aligned_cols=145  Identities=50%  Similarity=0.770  Sum_probs=139.0

Q ss_pred             cCCCCCCcHHHhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH----HHhHhhhHHHHhhhhcCCCCcHHHHHhhc
Q 003030          709 SDGIEGESAQRCKARLERHRRTAERAAKALAEKNMRDLLAQREQAER----NRLAETLDADVKRWSSGKEGNLRALLSTL  784 (855)
Q Consensus       709 ~~~~~ge~~~r~kar~~r~~r~~er~akalaek~~rd~~~q~eq~Er----~~l~d~ld~kI~~W~~GKe~NIRALLSTL  784 (855)
                      +...-|...+++..+..+++++..+...++..+.-+|+.-+++++++    .+++|.||.+|..|+.||++|||||||||
T Consensus       302 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~~~ae~~~e~~r~~e~~d~~I~~W~~GKE~NIRALLSTL  381 (453)
T KOG0431|consen  302 GNTERGKRAESSSTRTKKQMDTFSDLLNPQGFKSTSDEKRPREIAEMRKELSRLMEPLDEEIRRWSEGKEGNIRALLSTL  381 (453)
T ss_pred             ccccccccccccccccchhhhhhhhhhccccccchhhhhhHHHHHHHHHHHHhhcchHHHHHHHhcccccccHHHHHHHH
Confidence            44567888889999999999999999999999999999999999999    89999999999999999999999999999


Q ss_pred             ccccCCCCCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHHHHHHHHHHHHHHhhh
Q 003030          785 QYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICEKVFDLLKVSLLLSCR  853 (855)
Q Consensus       785 ~~VLWp~~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe~VF~~LneAwevLk~  853 (855)
                      ||||||+|||+||+|+|||||++|||+||||||||||||+++.|++++|||||+.||++|++||+.|..
T Consensus       382 h~VLW~es~WqpVsltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~~  450 (453)
T KOG0431|consen  382 HYVLWPESGWQPVSLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFNQ  450 (453)
T ss_pred             hHhhcCccCcccCchhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhc
Confidence            999999999999999999999999999999999999999999999999999999999999999999864

>smart00271 DnaJ DnaJ molecular chaperone homology domain Back     alignment and domain information
>cd06257 DnaJ DnaJ domain or J-domain Back     alignment and domain information
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional Back     alignment and domain information
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein [] Back     alignment and domain information
>PRK14288 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK09510 tolA cell envelope integrity inner membrane protein TolA; Provisional Back     alignment and domain information
>PRK14296 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14279 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14285 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14299 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14295 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14286 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14277 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10767 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14283 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14294 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK10266 curved DNA-binding protein CbpA; Provisional Back     alignment and domain information
>PRK14281 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14280 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14276 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14297 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14301 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14287 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00037 DnaJ_C chaperone protein; Provisional Back     alignment and domain information
>PRK14282 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14298 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14290 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PHA03102 Small T antigen; Reviewed Back     alignment and domain information
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK05014 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK14289 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PTZ00100 DnaJ chaperone protein; Provisional Back     alignment and domain information
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional Back     alignment and domain information
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK00294 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK03578 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>PRK01356 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB Back     alignment and domain information
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG3064 TolA Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PHA02624 large T antigen; Provisional Back     alignment and domain information
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK09510 tolA cell envelope integrity inner membrane protein TolA; Provisional Back     alignment and domain information
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PRK14284 chaperone protein DnaJ; Provisional Back     alignment and domain information
>COG3064 TolA Membrane protein involved in colicin uptake [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14300 chaperone protein DnaJ; Provisional Back     alignment and domain information
>TIGR02794 tolA_full TolA protein Back     alignment and domain information
>PRK14291 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14278 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK01773 hscB co-chaperone HscB; Provisional Back     alignment and domain information
>TIGR02349 DnaJ_bact chaperone protein DnaJ Back     alignment and domain information
>PTZ00121 MAEBL; Provisional Back     alignment and domain information
>PRK14293 chaperone protein DnaJ; Provisional Back     alignment and domain information
>PRK14292 chaperone protein DnaJ; Provisional Back     alignment and domain information
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms] Back     alignment and domain information
>TIGR02794 tolA_full TolA protein Back     alignment and domain information
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ Back     alignment and domain information
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query855
3ag7_A106 An Auxilin-Like J-Domain Containing Protein, Jac1 J 2e-25
1xi5_J114 Clathrin D6 Coat With Auxilin J-Domain Length = 114 7e-10
1n4c_A182 Nmr Structure Of The J-Domain And Clathrin Substrat 8e-10
1nz6_A101 Crystal Structure Of Auxilin J-Domain Length = 101 1e-08
2qwo_B92 Crystal Structure Of Disulfide-Bond-Crosslinked Com 2e-08
2qwn_B94 Crystal Structure Of Disulfide-Bond-Crosslinked Com 2e-08
>pdb|3AG7|A Chain A, An Auxilin-Like J-Domain Containing Protein, Jac1 J-Domain Length = 106 Back     alignment and structure 
Iteration: 1

 Score =  114 bits (286), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/86 (59%), Positives = 70/86 (81%)
Query: 760 ETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRKATLCV 819
           + +DA +++WSSGK GN+R+LLSTLQYIL   SGW P+PL ++I   AV+K+Y++A L +
Sbjct: 9   KNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLIL 68
Query: 820 HPDKLQQRGASIQQKYICEKVFDLLK 845
           HPDKLQQ+GAS  QKY+ EKVF+LL+
Sbjct: 69  HPDKLQQKGASANQKYMAEKVFELLQ 94
>pdb|1XI5|J Chain J, Clathrin D6 Coat With Auxilin J-Domain Length = 114 Back     alignment and structure
>pdb|1N4C|A Chain A, Nmr Structure Of The J-Domain And Clathrin Substrate Binding Domain Of Bovine Auxilin Length = 182 Back     alignment and structure
>pdb|1NZ6|A Chain A, Crystal Structure Of Auxilin J-Domain Length = 101 Back     alignment and structure
>pdb|2QWO|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi Form #1 Length = 92 Back     alignment and structure
>pdb|2QWN|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 94 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query855
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 2e-29
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 4e-28
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 4e-23
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
2zuo_A861 MVP, major vault protein; repeat domains, protein- 7e-08
2zuo_A861 MVP, major vault protein; repeat domains, protein- 1e-07
2zuo_A861 MVP, major vault protein; repeat domains, protein- 1e-06
2zuo_A861 MVP, major vault protein; repeat domains, protein- 1e-05
2zuo_A861 MVP, major vault protein; repeat domains, protein- 3e-05
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 8e-06
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 3e-04
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 3e-04
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 8e-05
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 8e-04
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 9e-04
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106 Back     alignment and structure
 Score =  112 bits (280), Expect = 2e-29
 Identities = 51/91 (56%), Positives = 71/91 (78%)

Query: 755 RNRLAETLDADVKRWSSGKEGNLRALLSTLQYILGPDSGWHPIPLTEVITSAAVKKAYRK 814
            +   + +DA +++WSSGK GN+R+LLSTLQYIL   SGW P+PL ++I   AV+K+Y++
Sbjct: 4   GSEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQR 63

Query: 815 ATLCVHPDKLQQRGASIQQKYICEKVFDLLK 845
           A L +HPDKLQQ+GAS  QKY+ EKVF+LL+
Sbjct: 64  ALLILHPDKLQQKGASANQKYMAEKVFELLQ 94
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182 Back     alignment and structure
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>2zuo_A MVP, major vault protein; repeat domains, protein-protein complex, cytoplasm, ribonucleoprotein, structural protein; 3.50A {Rattus norvegicus} PDB: 2zv4_N 2zv5_a 2qzv_A Length = 861 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query855
2qwo_B92 Putative tyrosine-protein phosphatase auxilin; cha 99.91
3ag7_A106 Putative uncharacterized protein F9E10.5; J-domain 99.87
1n4c_A182 Auxilin; four helix bundle, protein binding; NMR { 99.82
2ys8_A90 RAB-related GTP-binding protein RABJ; DNAJ domain, 98.72
1wjz_A94 1700030A21RIK protein; J-domain, DNAJ like protein 98.67
2dn9_A79 DNAJ homolog subfamily A member 3; J-domain, TID1, 98.54
1iur_A88 KIAA0730 protein; DNAJ like domain, riken structur 98.53
1hdj_A77 Human HSP40, HDJ-1; molecular chaperone; NMR {Homo 98.53
2cug_A88 Mkiaa0962 protein; DNAJ-like domain, structural ge 98.5
2yua_A99 Williams-beuren syndrome chromosome region 18 prot 98.49
2ej7_A82 HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati 98.48
2dmx_A92 DNAJ homolog subfamily B member 8; DNAJ J domain, 98.47
2ctp_A78 DNAJ homolog subfamily B member 12; J-domain, chap 98.45
2ctr_A88 DNAJ homolog subfamily B member 9; J-domain, chape 98.44
2ctq_A112 DNAJ homolog subfamily C member 12; J-domain, chap 98.42
2ctw_A109 DNAJ homolog subfamily C member 5; J-domain, chape 98.4
2qsa_A109 DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s 98.38
2lgw_A99 DNAJ homolog subfamily B member 2; J domain, HSJ1A 98.37
3bvo_A207 CO-chaperone protein HSCB, mitochondrial precurso; 98.35
1bq0_A103 DNAJ, HSP40; chaperone, heat shock, protein foldin 98.35
2och_A73 Hypothetical protein DNJ-12; HSP40, J-domain, chap 98.34
1faf_A79 Large T antigen; J domain, HPD motif, anti-paralle 98.33
2l6l_A155 DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, 98.32
1fpo_A 171 HSC20, chaperone protein HSCB; molecular chaperone 98.31
3hho_A 174 CO-chaperone protein HSCB homolog; structural geno 98.25
2o37_A92 Protein SIS1; HSP40, J-domain, cochaperone, APC900 98.25
2guz_A71 Mitochondrial import inner membrane translocase su 98.22
1gh6_A114 Large T antigen; tumor suppressor, oncoprotein, an 98.13
3lz8_A 329 Putative chaperone DNAJ; structure genomics, struc 97.81
3uo3_A 181 J-type CO-chaperone JAC1, mitochondrial; structura 97.79
2pf4_E 174 Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, 97.67
2guz_B65 Mitochondrial import inner membrane translocase su 97.3
3apo_A 780 DNAJ homolog subfamily C member 10; PDI family, th 97.16
3apq_A 210 DNAJ homolog subfamily C member 10; thioredoxin fo 96.68
2y4t_A450 DNAJ homolog subfamily C member 3; chaperone, endo 96.4
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Back     alignment and structure
Probab=99.91  E-value=5.2e-25  Score=197.38  Aligned_cols=90  Identities=32%  Similarity=0.514  Sum_probs=83.2

Q ss_pred             hhhHHHHhhhhcCCCCcHHHHHhhcccccCCC-CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHH
Q 003030          760 ETLDADVKRWSSGKEGNLRALLSTLQYILGPD-SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICE  838 (855)
Q Consensus       760 d~ld~kI~~W~~GKe~NIRALLSTL~~VLWp~-~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe  838 (855)
                      |.|+.+|..|+.||++|||+||+|||.|||++ ++|+.|||+.++++.+||+||||+++++||||+++.  +  ..++|+
T Consensus         1 ~~i~~~i~~W~~gk~~~ir~lL~~l~~~L~~~~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~--~--~~~~A~   76 (92)
T 2qwo_B            1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQ--P--YEQYAK   76 (92)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHGGGTSCTTCCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTS--T--THHHHH
T ss_pred             ChHHHHHHHHHccChhHHHHHHHHHHHHhcccccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--h--hHhHHH
Confidence            56899999999999999999999999999995 999999999999999999999999999999999842  2  236899


Q ss_pred             HHHHHHHHHHHHhhh
Q 003030          839 KVFDLLKVSLLLSCR  853 (855)
Q Consensus       839 ~VF~~LneAwevLk~  853 (855)
                      .+|..|++||++|+.
T Consensus        77 ~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           77 MIFMELNDAWSEFEN   91 (92)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999999974
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Back     alignment and structure
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Back     alignment and structure
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Back     alignment and structure
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Back     alignment and structure
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Back     alignment and structure
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Back     alignment and structure
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Back     alignment and structure
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Back     alignment and structure
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Back     alignment and structure
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Back     alignment and structure
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Back     alignment and structure
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Back     alignment and structure
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Back     alignment and structure
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Back     alignment and structure
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Back     alignment and structure
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Back     alignment and structure
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Back     alignment and structure
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Back     alignment and structure
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Back     alignment and structure
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 855
d1nz6a_98 a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T 6e-15
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98 Back     information, alignment and structure

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 69.2 bits (169), Expect = 6e-15
 Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 1/80 (1%)

Query: 762 LDADVKRWSSGKEGNLRALLSTLQYILGP-DSGWHPIPLTEVITSAAVKKAYRKATLCVH 820
               +  W  GKE N+RALLST+  +L   ++ W P+ + +++T   VKK YRKA L VH
Sbjct: 3   EKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVH 62

Query: 821 PDKLQQRGASIQQKYICEKV 840
           PDK   +      K I  ++
Sbjct: 63  PDKATGQPYEQYAKMIFMEL 82

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query855
d1nz6a_98 Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} 99.88
d1wjza_94 CSL-type zinc finger-containing protein 3 (J-domai 98.66
d1xbla_75 DnaJ chaperone, N-terminal (J) domain {Escherichia 98.66
d1iura_88 Hypothetical protein KIAA0730 {Human (Homo sapiens 98.5
d1fpoa176 HSC20 (HSCB), N-terminal (J) domain {Escherichia c 98.43
d1gh6a_114 Large T antigen, the N-terminal J domain {Simian v 98.4
d1fafa_79 Large T antigen, the N-terminal J domain {Murine p 98.3
d1hdja_77 HSP40 {Human (Homo sapiens) [TaxId: 9606]} 98.22
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.88  E-value=1.2e-23  Score=187.48  Aligned_cols=90  Identities=33%  Similarity=0.536  Sum_probs=82.6

Q ss_pred             hhhHHHHhhhhcCCCCcHHHHHhhcccccCCC-CCCccCCccccCChhHHHHHHHHhhhhcCCCcccCCCCchhHHHHHH
Q 003030          760 ETLDADVKRWSSGKEGNLRALLSTLQYILGPD-SGWHPIPLTEVITSAAVKKAYRKATLCVHPDKLQQRGASIQQKYICE  838 (855)
Q Consensus       760 d~ld~kI~~W~~GKe~NIRALLSTL~~VLWp~-~gWkpVgmsdL~tp~~VKKAYRKAiLkvHPDKl~~~gat~Eqk~iAe  838 (855)
                      |.|+.+|..|+.|+++|||+||+||+.|||++ +.|++|||++++|+.+||++||++++.+||||++..+    ....|.
T Consensus         1 d~~~~~i~~W~~~~~~~ir~lL~~l~~vl~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~----~~~~a~   76 (98)
T d1nz6a_           1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQP----YEQYAK   76 (98)
T ss_dssp             CHHHHHHHHHHTTTTTCHHHHHTTGGGTSCTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTST----THHHHH
T ss_pred             ChHHHHHHHHHhcchhhHHHHHHhhhhhcCCcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChH----HHHHHH
Confidence            46788999999999999999999999999985 7999999999999999999999999999999987533    345799


Q ss_pred             HHHHHHHHHHHHhhh
Q 003030          839 KVFDLLKVSLLLSCR  853 (855)
Q Consensus       839 ~VF~~LneAwevLk~  853 (855)
                      .+|..|++||++|+.
T Consensus        77 ~~f~~I~~Ay~~L~d   91 (98)
T d1nz6a_          77 MIFMELNDAWSEFEN   91 (98)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHCC
Confidence            999999999999974
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Back     information, alignment and structure
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Back     information, alignment and structure
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure