Citrus Sinensis ID: 003050
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 853 | 2.2.26 [Sep-21-2011] | |||||||
| P38415 | 860 | Linoleate 9S-lipoxygenase | N/A | no | 0.935 | 0.927 | 0.509 | 0.0 | |
| Q41238 | 857 | Linoleate 9S-lipoxygenase | N/A | no | 0.935 | 0.931 | 0.502 | 0.0 | |
| Q43190 | 860 | Probable linoleate 9S-lip | N/A | no | 0.935 | 0.927 | 0.503 | 0.0 | |
| Q43191 | 862 | Probable linoleate 9S-lip | N/A | no | 0.932 | 0.922 | 0.507 | 0.0 | |
| O24379 | 861 | Linoleate 9S-lipoxygenase | N/A | no | 0.935 | 0.926 | 0.499 | 0.0 | |
| O22507 | 861 | Probable linoleate 9S-lip | N/A | no | 0.935 | 0.926 | 0.498 | 0.0 | |
| O22508 | 861 | Probable linoleate 9S-lip | N/A | no | 0.935 | 0.926 | 0.498 | 0.0 | |
| P37831 | 861 | Linoleate 9S-lipoxygenase | N/A | no | 0.935 | 0.926 | 0.498 | 0.0 | |
| Q43189 | 861 | Probable linoleate 9S-lip | N/A | no | 0.935 | 0.926 | 0.495 | 0.0 | |
| Q9LUW0 | 886 | Linoleate 9S-lipoxygenase | yes | no | 0.941 | 0.906 | 0.486 | 0.0 |
| >sp|P38415|LOXA_SOLLC Linoleate 9S-lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1 | Back alignment and function desciption |
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Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/818 (50%), Positives = 571/818 (69%), Gaps = 20/818 (2%)
Query: 50 GKSASVQIFSCTKVDPGTG-KGKLSHIAYLKNGK-SHKHNGTKTTTYKLKFYVEPDFGNP 107
G+ S Q+ S + DP G +GK S+ AYL+N + T + + F +FG P
Sbjct: 49 GQKVSFQLISSVQSDPANGLQGKHSNPAYLENFLLTLTPLAAGETAFGVTFDWNEEFGVP 108
Query: 108 GAFVIENQHKYKFFLQAATLH-APDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSET 166
GAFVI+N H +FFL++ TL P++ +HF C SWVYP K+ RIFF+N+ YLPSET
Sbjct: 109 GAFVIKNMHINEFFLKSLTLEDVPNHGKVHFVCNSWVYPSFRYKSDRIFFANQPYLPSET 168
Query: 167 PSTLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPY 226
P L+ R+ EL++LRGDGTG+R+ W+RIYDYD YNDLG+PD G EN R LGGS PY
Sbjct: 169 PELLRKYRENELVTLRGDGTGKREAWDRIYDYDVYNDLGNPDQGKENVRTTLGGSADYPY 228
Query: 227 PRRGRTGRPKCRADLSTESR-PEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPE 285
PRRGRTGRP R D +ESR P ++LDIYVP DERF K+S+F+ ++++ + F++PE
Sbjct: 229 PRRGRTGRPPTRTDPKSESRIPLILSLDIYVPRDERFGHLKMSDFLTYALKSIVQFILPE 288
Query: 286 ANSLLEKDPH-FRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMR 344
++L + P+ F SF+++ ++ + +G L K L +P ++ +++ R +R
Sbjct: 289 LHALFDGTPNEFDSFEDVLRLYEGG-IKLPQGPLFKALTDAIPLEMIRELLRTDGEGILR 347
Query: 345 FPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLA 398
FP P +I ++ AW+ DEEF R+MLAG+NP I LE FPPK K + S+IT
Sbjct: 348 FPTPLVIKDSKTAWRTDEEFAREMLAGVNPVIISRLEEFPPKSKLDPELYGNQNSTITAE 407
Query: 399 DIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKP 458
IEG LDGL I +A+N +++IL+HHD L+P+L RINT++ YASRTLLFL+ + +LKP
Sbjct: 408 HIEGKLDGLTIDEAINSNKLFILNHHDVLIPYLRRINTTTTKTYASRTLLFLQDNGSLKP 467
Query: 459 VAIELSLPSISSDE---VNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHA 515
+AIELSLP D+ ++V+ P+ +G+E ++WQLAKA+V NDS HQL++HWL+THA
Sbjct: 468 LAIELSLPHPDGDQFGVTSKVYTPSDQGVEGSIWQLAKAYVAVNDSGVHQLISHWLNTHA 527
Query: 516 VVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKICME 575
V+EPFVIAT RQLSV+HP+H+LL PHF+DTM++NALAR IL+NAGG+LE T+FP K ME
Sbjct: 528 VIEPFVIATNRQLSVLHPIHKLLYPHFRDTMNINALARQILINAGGVLESTVFPSKFAME 587
Query: 576 LSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWV 635
+S+ +YK+W F +QALP DL+KR +A+EDS P G ++L DYPY +DGL++W AI +WV
Sbjct: 588 MSAVVYKDWVFPDQALPADLVKRGVAVEDSSSPHGVRLLIDDYPYAVDGLEIWSAIKSWV 647
Query: 636 KDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWT 695
DYCS +Y ++ + D E+QAWWKE+REVGHGDK+N WW EM + LI + T +IW
Sbjct: 648 TDYCSFYYGSNEEILKDNELQAWWKEVREVGHGDKKNEPWWAEMETPQELIDSCTTIIWI 707
Query: 696 SSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAIT 755
+SALHA+VNFGQY YA Y PNRPT+ RKF+P+ GT E+ EL + DK +LK + +
Sbjct: 708 ASALHAAVNFGQYPYAGYLPNRPTVSRKFMPEPGTPEYEELKKNPDKAFLKTITAQLQTL 767
Query: 756 LSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARL 815
L +L+E+LSRHT+DE+YLGQR+S EWT D+E L FE FG KL +IE++I +RN N L
Sbjct: 768 LGVSLIEILSRHTTDEIYLGQRESPEWTKDKEPLAAFERFGNKLTDIEKQIMQRNGNNIL 827
Query: 816 KNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
NR GP Y L+ P + +GG+TGKGIPNS+SI
Sbjct: 828 TNRTGPVNAPYTLLFPTS-----EGGLTGKGIPNSVSI 860
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Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding. It catalyzes the hydroperoxidation of lipids containing a cis,cis-1,4-pentadiene structure. Solanum lycopersicum (taxid: 4081) EC: 1EC: .EC: 1EC: 3EC: .EC: 1EC: 1EC: .EC: 5EC: 8 |
| >sp|Q41238|LOX16_SOLTU Linoleate 9S-lipoxygenase 6 (Fragment) OS=Solanum tuberosum GN=LOX1.6 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q43190|LOX14_SOLTU Probable linoleate 9S-lipoxygenase 4 OS=Solanum tuberosum GN=LOX1.4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q43191|LOX15_SOLTU Probable linoleate 9S-lipoxygenase 5 OS=Solanum tuberosum GN=LOX1.5 PE=2 SV=1 | Back alignment and function description |
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| >sp|O24379|LOX12_SOLTU Linoleate 9S-lipoxygenase 2 OS=Solanum tuberosum GN=LOX1.2 PE=1 SV=1 | Back alignment and function description |
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| >sp|O22507|LOX17_SOLTU Probable linoleate 9S-lipoxygenase 7 OS=Solanum tuberosum GN=LOX1.7 PE=2 SV=1 | Back alignment and function description |
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| >sp|O22508|LOX18_SOLTU Probable linoleate 9S-lipoxygenase 8 OS=Solanum tuberosum GN=LOX1.8 PE=2 SV=1 | Back alignment and function description |
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| >sp|P37831|LOX11_SOLTU Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum GN=LOX1.1 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q43189|LOX13_SOLTU Probable linoleate 9S-lipoxygenase 3 OS=Solanum tuberosum GN=LOX1.3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9LUW0|LOX5_ARATH Linoleate 9S-lipoxygenase 5, chloroplastic OS=Arabidopsis thaliana GN=LOX5 PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 853 | ||||||
| 255572666 | 852 | lipoxygenase, putative [Ricinus communis | 0.992 | 0.994 | 0.676 | 0.0 | |
| 224127288 | 804 | predicted protein [Populus trichocarpa] | 0.921 | 0.977 | 0.674 | 0.0 | |
| 224129376 | 753 | predicted protein [Populus trichocarpa] | 0.867 | 0.982 | 0.680 | 0.0 | |
| 356560677 | 853 | PREDICTED: LOW QUALITY PROTEIN: linoleat | 0.977 | 0.977 | 0.583 | 0.0 | |
| 300119926 | 724 | lipoxygenase [Vitis vinifera] | 0.846 | 0.997 | 0.674 | 0.0 | |
| 326532112 | 844 | predicted protein [Hordeum vulgare subsp | 0.961 | 0.971 | 0.542 | 0.0 | |
| 359494762 | 676 | PREDICTED: linoleate 9S-lipoxygenase 6, | 0.784 | 0.989 | 0.657 | 0.0 | |
| 357143959 | 896 | PREDICTED: linoleate 9S-lipoxygenase 2-l | 0.961 | 0.915 | 0.531 | 0.0 | |
| 162460340 | 850 | lipoxygenase [Zea mays] gi|84626301|gb|A | 0.964 | 0.968 | 0.532 | 0.0 | |
| 115463087 | 847 | Os05g0304600 [Oryza sativa Japonica Grou | 0.976 | 0.983 | 0.527 | 0.0 |
| >gi|255572666|ref|XP_002527266.1| lipoxygenase, putative [Ricinus communis] gi|223533359|gb|EEF35110.1| lipoxygenase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1213 bits (3139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/856 (67%), Positives = 693/856 (80%), Gaps = 9/856 (1%)
Query: 3 MQHRGLRSDLQACFSSVQSAITSHAQANHAIIKGKIVIDHSPGQSGPGKSASVQIFSCTK 62
M+ RS +QAC ++ S T + +I+GK V+ S G+SGPGKSAS+QI+S T
Sbjct: 1 MESHKPRSGIQACMGTIHSKPTHSIRK--YVIRGKFVVLQSRGKSGPGKSASIQIYSSTV 58
Query: 63 VDPGTGKGKLSHIAYLKNGKSHKHNGTKTTTYKLKFYVEPDFGNPGAFVIENQHKYKFFL 122
+DP TG+GKLS AYLK GKS KH+GTKT TY++K ++P+FG PGAFVI NQHK++FFL
Sbjct: 59 LDPSTGRGKLSKKAYLKYGKSKKHSGTKTITYQIKLRMDPEFGIPGAFVIVNQHKHEFFL 118
Query: 123 QAATLHAPDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETPSTLKDLRKQELISLR 182
+ ATL DNQ IHFDCRSWVYPI+ TK+ R+FFSN SYLP++TPS L++LRK ELISLR
Sbjct: 119 ETATLEFLDNQIIHFDCRSWVYPIQKTKSERLFFSNTSYLPNQTPSPLEELRKSELISLR 178
Query: 183 GDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADLS 242
GDGTGER EW+RIYDYDYYNDLG PD GP++ RP+LGGSE PYPRRGRTG D+
Sbjct: 179 GDGTGERNEWDRIYDYDYYNDLGRPDKGPKHTRPILGGSEKHPYPRRGRTGHSPSSTDVQ 238
Query: 243 ---TESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEANSLLEKDPH-FRS 298
++ E N D+YVPPDER SPKKL+EFI NS++AS HFLIPEA SL ++D + F+S
Sbjct: 239 LHLSDLWEEAFNFDVYVPPDERLSPKKLAEFISNSVQASAHFLIPEAKSLFKQDSNTFKS 298
Query: 299 FDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMRFPEPQIIANNDLAW 358
FDEIR +F+S +++ + G +T+KL+KL+P +F++I ASK D FP PQIIA N LAW
Sbjct: 299 FDEIRDIFTSKRNQVIRGKVTEKLKKLVPAGIFEEIIHASKEDSKNFPLPQIIAENQLAW 358
Query: 359 KEDEEFGRQMLAGINPTRIRCLEAFPPKGKNGKMSSITLADIEGSLDGLDITQAMNQWRI 418
++DEEFG QMLAGINPTRIRCL+ FPP+GK+G+ S+I ++DIE +LDGL+I QAM QWRI
Sbjct: 359 RDDEEFGHQMLAGINPTRIRCLQRFPPEGKHGQ-STIKVSDIEPNLDGLNIFQAMYQWRI 417
Query: 419 YILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKPVAIELSLPS-ISSDEVNRVF 477
+ILDHHDYLMPFL +INT VCAYASRTL FLR+DATLKPVAIELSLP + E++RVF
Sbjct: 418 FILDHHDYLMPFLDKINTKGVCAYASRTLFFLRNDATLKPVAIELSLPGPLKDKEISRVF 477
Query: 478 LPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRL 537
PA EG EAALWQLAKAHV ANDSAYHQL++HWLHTHAVVEPF+IATRRQLSVMHP+HRL
Sbjct: 478 RPASEGTEAALWQLAKAHVAANDSAYHQLISHWLHTHAVVEPFIIATRRQLSVMHPIHRL 537
Query: 538 LDPHFKDTMHVNALARSILLNAGGILEKTLFPGKICMELSSELYKEWRFDEQALPKDLIK 597
LDPHFKDTMHVNALAR IL+N+GGILEKTLF G+I MELS+ELYKEWRFDEQALP DL+K
Sbjct: 538 LDPHFKDTMHVNALARKILINSGGILEKTLFTGEISMELSAELYKEWRFDEQALPADLLK 597
Query: 598 RRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQA 657
RRLALED D PTG Q+LF+DYPYG DGLD+W AI TWV DYCS+FYKDD+ V+SD EIQ
Sbjct: 598 RRLALEDPDSPTGVQLLFEDYPYGADGLDIWHAIKTWVTDYCSVFYKDDNLVRSDIEIQG 657
Query: 658 WWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNR 717
WW EI+ VGH DK++ +WW+EM + NLI+ALT LIW +SA HAS+NFGQYAYA+YPPNR
Sbjct: 658 WWLEIKNVGHTDKQSETWWYEMTTVSNLIEALTTLIWITSAFHASLNFGQYAYASYPPNR 717
Query: 718 PTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQR 777
P LCRKFIP EG +E+AE L+D DKYYL MLPERF TL L EVLS+H+SDEVYLGQR
Sbjct: 718 PMLCRKFIPKEGEKEYAEFLMDPDKYYLNMLPERFQTTLGIVLTEVLSQHSSDEVYLGQR 777
Query: 778 QSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARLKNRWGPAKIAYKLMHPDTSNVK 837
+W D++EV ++FE+F E LKEIE KI+ERN N +NR G AKI Y L+HPDTSN
Sbjct: 778 -PLQWIDNKEVQQRFEKFNEDLKEIENKISERNANPMFRNRRGNAKIPYNLLHPDTSNSG 836
Query: 838 NDGGITGKGIPNSISI 853
+ GGITGKGIPNSISI
Sbjct: 837 SKGGITGKGIPNSISI 852
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127288|ref|XP_002320037.1| predicted protein [Populus trichocarpa] gi|222860810|gb|EEE98352.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224129376|ref|XP_002320571.1| predicted protein [Populus trichocarpa] gi|222861344|gb|EEE98886.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356560677|ref|XP_003548616.1| PREDICTED: LOW QUALITY PROTEIN: linoleate 9S-lipoxygenase 6-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|300119926|gb|ADJ67988.1| lipoxygenase [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|326532112|dbj|BAK01432.1| predicted protein [Hordeum vulgare subsp. vulgare] | Back alignment and taxonomy information |
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| >gi|359494762|ref|XP_003634834.1| PREDICTED: linoleate 9S-lipoxygenase 6, partial [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357143959|ref|XP_003573115.1| PREDICTED: linoleate 9S-lipoxygenase 2-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|162460340|ref|NP_001105997.1| lipoxygenase [Zea mays] gi|84626301|gb|ABC59695.1| lipoxygenase [Zea mays] gi|414877659|tpg|DAA54790.1| TPA: lipoxygenase [Zea mays] | Back alignment and taxonomy information |
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| >gi|115463087|ref|NP_001055143.1| Os05g0304600 [Oryza sativa Japonica Group] gi|113578694|dbj|BAF17057.1| Os05g0304600 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 853 | ||||||
| TAIR|locus:2087837 | 886 | LOX5 [Arabidopsis thaliana (ta | 0.892 | 0.858 | 0.5 | 2.3e-220 | |
| TAIR|locus:2011030 | 859 | LOX1 "lipoxygenase 1" [Arabido | 0.930 | 0.924 | 0.493 | 2.5e-216 | |
| TAIR|locus:2030215 | 926 | LOX4 "lipoxygenase 4" [Arabido | 0.928 | 0.855 | 0.428 | 3.1e-177 | |
| TAIR|locus:2018848 | 919 | LOX3 "lipoxygenase 3" [Arabido | 0.928 | 0.861 | 0.427 | 7.7e-174 | |
| TAIR|locus:2096915 | 896 | LOX2 "lipoxygenase 2" [Arabido | 0.868 | 0.827 | 0.430 | 1.6e-164 | |
| UNIPROTKB|P38419 | 924 | CM-LOX1 "Lipoxygenase 7, chlor | 0.924 | 0.853 | 0.417 | 3.1e-163 | |
| TAIR|locus:2008808 | 917 | LOX6 "lipoxygenase 6" [Arabido | 0.923 | 0.859 | 0.403 | 1.1e-153 | |
| UNIPROTKB|P29250 | 870 | LOX1.1 "Linoleate 9S-lipoxygen | 0.549 | 0.539 | 0.492 | 1.1e-128 | |
| ZFIN|ZDB-GENE-060623-19 | 676 | zgc:136911 "zgc:136911" [Danio | 0.586 | 0.739 | 0.316 | 1.6e-56 | |
| ZFIN|ZDB-GENE-050522-330 | 676 | zgc:110251 "zgc:110251" [Danio | 0.504 | 0.636 | 0.326 | 3.7e-53 |
| TAIR|locus:2087837 LOX5 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2128 (754.2 bits), Expect = 2.3e-220, P = 2.3e-220
Identities = 389/778 (50%), Positives = 556/778 (71%)
Query: 92 TTYKLKFYVEPDFGNPGAFVIENQHKYKFFLQAATLHA-PDNQ----AIHFDCRSWVYPI 146
T + + F + G P AFVI+N H +F+L++ TL PD + AIHF C SW+YP
Sbjct: 110 TAFGVTFDWDESMGPPAAFVIKNHHHSQFYLKSLTLRGFPDGEGGATAIHFICNSWIYPN 169
Query: 147 KLTKTPRIFFSNKSYLPSETPSTLKDLRKQELISLRGDGTG-ERKEWERIYDYDYYNDLG 205
++ R+FFSNK+YLPSETP +K+LR++EL +LRG+ G E KEW+R+YDY YYNDLG
Sbjct: 170 HRYRSDRVFFSNKAYLPSETPELIKELREEELKNLRGNEKGGEFKEWDRVYDYAYYNDLG 229
Query: 206 DPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPK 265
PD GP++ RPVLGGS LPYPRRG+TGR ++D +ESR +NL+IYVP DERFS
Sbjct: 230 APDKGPDSVRPVLGGSPELPYPRRGKTGRKSTKSDPKSESRLALLNLNIYVPRDERFSHV 289
Query: 266 KLSEFIGNSIRASLHFLIPEANSLLEKDPH-FRSFDEIRGMFSSNKSRKVEGWLTKKLQK 324
K S+F+ ++++ L+PE S+ +K + F SF+++ ++ + + G KL+
Sbjct: 290 KFSDFLAYALKSVTQVLVPEIASVCDKTINEFDSFEDVFHLYDGS-IKLANGHTISKLRD 348
Query: 325 LLPEQLFKQITRASKGDPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFP 384
++P ++F+++ R +++P P I+ + AW+ DEEF R+MLAG+NP I L+ FP
Sbjct: 349 VIPWEMFRELVRNDGERFLKYPLPDILKESRSAWRTDEEFAREMLAGLNPVVISRLQEFP 408
Query: 385 PKG-----KNGKM-SSITLADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSS 438
PK K G SSI IE +++GL++ +A+ Q ++YILDHHD LMP+L+RIN+++
Sbjct: 409 PKSCLDSAKYGNQHSSIRTEHIESNMNGLNVQEALEQNKLYILDHHDALMPYLTRINSTN 468
Query: 439 VCAYASRTLLFLRSDATLKPVAIELSLPSISSDE---VNRVFLPAKEGIEAALWQLAKAH 495
YA+RTLL L++D TLKP+AIELSLP + V++VF PA++G+E ++WQLAKA+
Sbjct: 469 TKTYATRTLLLLQADGTLKPLAIELSLPHAQGESYGSVSKVFTPAEKGVEGSVWQLAKAY 528
Query: 496 VLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSI 555
NDS YHQL++HWL THAV+EPF+IA+ RQLSV+HP+H+LL PHF+DTM++NALAR +
Sbjct: 529 AAVNDSGYHQLISHWLQTHAVIEPFIIASNRQLSVVHPIHKLLHPHFRDTMNINALARHV 588
Query: 556 LLNAGGILEKTLFPGKICMELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILF 615
L+N+ G+LE+T+FP + ME+SS +YK W F EQALPKDL+KR +A+ED + G ++L
Sbjct: 589 LINSDGVLERTVFPSRYAMEMSSSIYKNWVFTEQALPKDLLKRGVAVEDPNSDNGVKLLI 648
Query: 616 QDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASW 675
+DYP+ +DGL++W AI TWV +YC+ +Y +D +V++D EIQ+WW E+R GHGDKR+ SW
Sbjct: 649 EDYPFAVDGLEIWSAIKTWVTEYCTFYYNNDKTVQTDTEIQSWWTELRTKGHGDKRHESW 708
Query: 676 WFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAE 735
W M +RD+LI+ TI+IW +SALHA+VNFGQY YA + PNRPT+ R+F+P+ GT E+AE
Sbjct: 709 WPSMQTRDDLIETCTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRFMPEPGTDEYAE 768
Query: 736 LLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEF 795
L D+D +LK + + L +++E+LS H++DE+YLGQR S WT D E L F+ F
Sbjct: 769 LEEDADVAFLKTITPQLQTLLGISIIEILSMHSTDEIYLGQRDSPNWTADDEPLEAFKRF 828
Query: 796 GEKLKEIEQKIAERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
G++L+ IE I RN + R KNR GP I Y L++P+T++ +GGITGKGIPNS+SI
Sbjct: 829 GKELELIENNIIRRNNDKRFKNRTGPVNIPYTLLYPNTTDYTREGGITGKGIPNSVSI 886
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| TAIR|locus:2011030 LOX1 "lipoxygenase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2030215 LOX4 "lipoxygenase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2018848 LOX3 "lipoxygenase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2096915 LOX2 "lipoxygenase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P38419 CM-LOX1 "Lipoxygenase 7, chloroplastic" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2008808 LOX6 "lipoxygenase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P29250 LOX1.1 "Linoleate 9S-lipoxygenase 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-060623-19 zgc:136911 "zgc:136911" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-050522-330 zgc:110251 "zgc:110251" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q41238 | LOX16_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.5024 | 0.9355 | 0.9311 | N/A | no |
| Q9LUW0 | LOX5_ARATH | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.4860 | 0.9413 | 0.9063 | yes | no |
| Q43190 | LOX14_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.5036 | 0.9355 | 0.9279 | N/A | no |
| Q43191 | LOX15_SOLTU | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.5079 | 0.9320 | 0.9222 | N/A | no |
| P38415 | LOXA_SOLLC | 1, ., 1, 3, ., 1, 1, ., 5, 8 | 0.5097 | 0.9355 | 0.9279 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.13.11 | 0.691 |
| 3rd Layer | 1.13.11.12 | 0.914 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
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 |
 |
 |
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 | gw1.XIV.659.1 | hypothetical protein; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding (By similarity) (771 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | CYP74A1 | • | • | 0.902 | |||||||
 | gw1.XVIII.245.1 | • | 0.899 | ||||||||
 | gw1.XVI.1394.1 | • | 0.899 | ||||||||
 | gw1.40.286.1 | • | 0.899 | ||||||||
 | fgenesh4_pg.C_LG_II001255 | • | 0.899 | ||||||||
 | eugene3.00060391 | • | 0.899 | ||||||||
 | CYP74B7 | • | 0.899 | ||||||||
 | estExt_fgenesh4_pg.C_LG_VIII0936 | • | 0.899 | ||||||||
 | grail3.0064002701 | • | 0.502 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 853 | |||
| PLN02337 | 866 | PLN02337, PLN02337, lipoxygenase | 0.0 | |
| pfam00305 | 667 | pfam00305, Lipoxygenase, Lipoxygenase | 0.0 | |
| PLN02264 | 919 | PLN02264, PLN02264, lipoxygenase | 0.0 | |
| PLN02305 | 918 | PLN02305, PLN02305, lipoxygenase | 0.0 | |
| cd01751 | 137 | cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipox | 1e-24 | |
| smart00308 | 105 | smart00308, LH2, Lipoxygenase homology 2 (beta bar | 3e-12 | |
| pfam01477 | 115 | pfam01477, PLAT, PLAT/LH2 domain | 4e-12 |
| >gnl|CDD|215193 PLN02337, PLN02337, lipoxygenase | Back alignment and domain information |
|---|
Score = 1075 bits (2782), Expect = 0.0
Identities = 426/818 (52%), Positives = 584/818 (71%), Gaps = 16/818 (1%)
Query: 50 GKSASVQIFSCTKVDPGTG-KGKLSHIAYLKNG-KSHKHNGTKTTTYKLKFYVEPDFGNP 107
GK S+Q+ S T VDP G +GKL AYL+ + + +K+ F + G P
Sbjct: 51 GKGVSLQLISSTVVDPENGLRGKLGKEAYLEKWITTITSLTAGESAFKVTFDWDEKIGVP 110
Query: 108 GAFVIENQHKYKFFLQAATLH-APDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSET 166
GAF+I+N H +F+L+ TL P + +HF C SW+YP K + R+FFSNK+YLPS+T
Sbjct: 111 GAFIIKNNHHSEFYLKTVTLEDVPGHGRVHFVCNSWIYPAKRYRYDRVFFSNKTYLPSQT 170
Query: 167 PSTLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPY 226
P+ L+ R++EL++LRGDG GE KEW+R+YDYDYYNDLGDPD G ARPVLGGS+ PY
Sbjct: 171 PAPLRPYREEELVNLRGDGKGELKEWDRVYDYDYYNDLGDPDKGNPYARPVLGGSQEYPY 230
Query: 227 PRRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEA 286
PRRGRTGR + D ++ESR ++L+IYVP DERF K+S+F+ +++A L+PE
Sbjct: 231 PRRGRTGRKPTKTDPNSESRLPLLSLNIYVPRDERFGHLKMSDFLAYALKAIAQVLVPEL 290
Query: 287 NSLLEKDP-HFRSFDEIRGMFSSNKSRKV-EGWLTKKLQKLLPEQLFKQITRASKGDPMR 344
+L +K P F SF+++ ++ K+ G L ++L+K +P ++ K++ R ++
Sbjct: 291 EALFDKTPNEFDSFEDVLKLYEG--GIKLPNGPLLEELRKNIPLEMLKELLRTDGEYLLK 348
Query: 345 FPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLA 398
FP PQ+I + AW+ DEEF R+MLAG+NP IR L FPPK K + SSIT
Sbjct: 349 FPMPQVIKEDKSAWRTDEEFAREMLAGVNPVVIRRLTEFPPKSKLDPKKYGDQNSSITEE 408
Query: 399 DIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVCAYASRTLLFLRSDATLKP 458
IE +L+GL + +A+ + R++ILDHHD LMP+L RIN++S YA+RTLLFL+ D TLKP
Sbjct: 409 HIEKNLEGLTVQEALEKNRLFILDHHDALMPYLRRINSTSTKTYATRTLLFLKDDGTLKP 468
Query: 459 VAIELSLPSISSDE---VNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHA 515
+AIELSLP D+ V++V+ PA++G+E ++WQLAKA+V NDS YHQL++HWL+THA
Sbjct: 469 LAIELSLPHPQGDKFGAVSKVYTPAEDGVEGSVWQLAKAYVAVNDSGYHQLISHWLNTHA 528
Query: 516 VVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKICME 575
V+EPFVIAT RQLSV+HP+H+LL PHF+DTM++NALAR IL+NAGGILE T+FPGK +E
Sbjct: 529 VIEPFVIATNRQLSVLHPIHKLLHPHFRDTMNINALARQILINAGGILESTVFPGKYALE 588
Query: 576 LSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWV 635
+SS +YK W F EQALP DLIKR +A+ED P G ++L +DYPY +DGL++W AI TWV
Sbjct: 589 MSSVVYKNWNFTEQALPADLIKRGVAVEDPSSPHGVRLLIEDYPYAVDGLEIWSAIETWV 648
Query: 636 KDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWT 695
K+YC+ +Y DD V+ D E+Q+WWKE+RE GHGD ++ WW +M + LI++ TI+IW
Sbjct: 649 KEYCAFYYPTDDMVQGDTELQSWWKEVREEGHGDLKDEPWWPKMQTVAELIESCTIIIWI 708
Query: 696 SSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAIT 755
+SALHA+VNFGQY YA Y PNRPT+ R+F+P+ GT E+ EL + DK +LK + +
Sbjct: 709 ASALHAAVNFGQYPYAGYLPNRPTVSRRFMPEPGTPEYEELEKNPDKAFLKTITAQLQTL 768
Query: 756 LSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARL 815
L +L+E+LSRH+SDEVYLGQR + EWT D E L F+ FGE+L EIE +I + N++ RL
Sbjct: 769 LGISLIEILSRHSSDEVYLGQRDTPEWTSDAEPLEAFKRFGERLVEIENRIVDMNKDPRL 828
Query: 816 KNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
KNR GP K+ Y L++P+TS+ +GG+TGKGIPNS+SI
Sbjct: 829 KNRVGPVKMPYTLLYPNTSDYTGEGGLTGKGIPNSVSI 866
|
Length = 866 |
| >gnl|CDD|215847 pfam00305, Lipoxygenase, Lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215148 PLN02264, PLN02264, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|215174 PLN02305, PLN02305, lipoxygenase | Back alignment and domain information |
|---|
| >gnl|CDD|238849 cd01751, PLAT_LH2, PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|214608 smart00308, LH2, Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >gnl|CDD|216521 pfam01477, PLAT, PLAT/LH2 domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 853 | |||
| PLN02305 | 918 | lipoxygenase | 100.0 | |
| PLN02337 | 866 | lipoxygenase | 100.0 | |
| PLN02264 | 919 | lipoxygenase | 100.0 | |
| PF00305 | 667 | Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Li | 100.0 | |
| cd01751 | 137 | PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase re | 100.0 | |
| smart00308 | 105 | LH2 Lipoxygenase homology 2 (beta barrel) domain. | 99.2 | |
| PF01477 | 113 | PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxyg | 98.93 | |
| cd00113 | 116 | PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin | 98.85 | |
| cd02899 | 109 | PLAT_SR Scavenger receptor protein. A subfamily of | 98.51 | |
| cd01753 | 113 | PLAT_LOX PLAT domain of 12/15-lipoxygenase. As a u | 98.39 | |
| cd01756 | 120 | PLAT_repeat PLAT/LH2 domain repeats of family of p | 98.08 | |
| cd01754 | 129 | PLAT_plant_stress PLAT/LH2 domain of plant-specifi | 98.03 | |
| cd01752 | 120 | PLAT_polycystin PLAT/LH2 domain of polycystin-1 li | 97.92 | |
| cd01757 | 114 | PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 inter | 97.5 |
| >PLN02305 lipoxygenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-261 Score=2244.51 Aligned_cols=813 Identities=43% Similarity=0.765 Sum_probs=777.2
Q ss_pred cccceeEEEeEEEE--------------ECCCCCCCCCCceEEEEEeccccCCCCCCcccCcccccccccccCCCC-Cce
Q 003050 27 AQANHAIIKGKIVI--------------DHSPGQSGPGKSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHNG-TKT 91 (853)
Q Consensus 27 ~~~~~~~~~~~~~~--------------~~d~~~~~~g~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~~-~~~ 91 (853)
+.++..+|||+||| .+|.++|++||+|+|||||++. |++||+||++ ++.|++|.++ ... +++
T Consensus 77 ~~~~~~~i~~~v~~~~~~~~~~~~~~~~~~d~~~~~~g~~v~lqLvS~~~-~~~~g~gk~~-~~~l~~~~~~-~~~~~~~ 153 (918)
T PLN02305 77 KYAGGIDVRAVITIRKKIKEKITEKFEDQWEYFMNGIGQGILIQLVSEEI-DPVTGSGKSV-ESSVRGWLPK-PSNDPHI 153 (918)
T ss_pred hhccCCeEEEEEEEEeecccchhhcccchhhHHHHhhCCeEEEEEEeccc-cCCCCCcccc-cchhhccccC-CCCCCCc
Confidence 34456689999999 4688999999999999999985 4479999988 9999999976 334 667
Q ss_pred EEEEEEEecCCCCCCceEEEEEecCCCceeeeEEEEecCCCCeEEEEeccccccCCCCCcceeEecCcccccCCCChhhH
Q 003050 92 TTYKLKFYVEPDFGNPGAFVIENQHKYKFFLQAATLHAPDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETPSTLK 171 (853)
Q Consensus 92 ~~y~v~f~~~~~~G~pgai~v~n~~~~e~~l~~i~l~~~p~~~~~Fpc~sWv~~~~~~~~~riff~~~~yLp~~tp~~L~ 171 (853)
++|+++|+||++||+||||+|+|.|++||||++|+|+++|+|+|||+||||||+.++|+++||||+||+|||++||++|+
T Consensus 154 ~~~~~~f~~~~~fG~pGA~~v~N~h~~ef~l~~i~l~~~p~g~v~f~cnSWv~~~~~~~~~RiFF~nk~ylP~~tP~~l~ 233 (918)
T PLN02305 154 VEYAADFTVPFDFGKPGAVLVTNLHGKEFYLMEIVIHGFDDGPIFFPANTWIHSRKDNPESRIIFRNQAYLPSQTPPGIK 233 (918)
T ss_pred eEEEEEEeeccccCCcceEEEEeCCCceEEEEEEEEecCCCCeEEEeccCccccCCCCCCCceEecCCCcCcccCCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCCccccCeeeeccccCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCC
Q 003050 172 DLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADLSTESRPEKIN 251 (853)
Q Consensus 172 ~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~pd~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~~~~~~ 251 (853)
+|||+||++|||||+||||+||||||||+|||||+||++++++|||||||+ ||||||||||||||++||.+|||....
T Consensus 234 ~~Re~eL~~lRGdg~Gerk~~dRiYdYd~YNDLG~Pd~~~~~~RpvLGG~~-~PYPRR~RTGR~~t~~Dp~~Esr~~~~- 311 (918)
T PLN02305 234 DLRREDLLSLRGNGKGERKPHDRIYDYAPYNDLGNPDKDEDLARPVLGGEE-WPYPRRCRTGRPPTKKDPLCESRIEKP- 311 (918)
T ss_pred HHHHHHHHHhcCCCCCcCCccccccchhhhccCCCCCCCccccCcccCCCC-CCCCCcCcCCCCCCCCCCcccccccCC-
Confidence 999999999999999999999999999999999999999999999999988 999999999999999999999996432
Q ss_pred CccccCCCCCCCcccccchhhhhHHHHHhhhhHHHhhhhcC-CCCCCCHHHHHhhccCCCCcccchhhHHHHhhhchH--
Q 003050 252 LDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEANSLLEK-DPHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPE-- 328 (853)
Q Consensus 252 ~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~-~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~p~-- 328 (853)
..+||||||+|+++|++||+++++|+++|.++|.|+++++. ..+|++|+||++||++|++||.. ..+.+++ +|+
T Consensus 312 ~~~YvPrDE~f~~~K~~~f~~~~lk~~~~~~~p~~~~~~~~~~~~F~~f~~i~~Ly~~g~~l~~~--~~~~~~~-~p~~~ 388 (918)
T PLN02305 312 HPVYVPRDETFEEIKRNTFSAGRLKALLHNLIPSIAAALSSSDIPFTCFSDIDKLYNDGILLKTE--EPKDIGL-NPFLG 388 (918)
T ss_pred CCcCCCCCCCcccchhhhHHHHHHHHHHHhhhhHHHHhcCCCCCCCCCHHHHHHHhccCCcCCch--hhhhhhc-CCchH
Confidence 24799999999999999999999999999999999999887 78999999999999999999973 1134444 887
Q ss_pred HHHHHHhhcCCCCCCCCCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCC------CCCCCCCchhhhhc
Q 003050 329 QLFKQITRASKGDPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLADIEG 402 (853)
Q Consensus 329 ~~~~~~~~~~~~~~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~------g~~~~~it~e~i~~ 402 (853)
+++|++ ++++|.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++|+ |+++|+||+|||+.
T Consensus 389 ~~~~~i-~~~~~~~lkf~~P~vi~~d~~~W~~DeeFaRQ~LaGvNP~~I~rl~efP~~skldp~~yG~~~s~iT~e~ve~ 467 (918)
T PLN02305 389 NFMKQV-LSVSERLLKYDIPAVIKRDRFAWLRDNEFARQALAGVNPVNIEILKEFPILSKLDPAVYGPPESALTEELIER 467 (918)
T ss_pred HHHHHh-hhcccccccCCCcceeecccccccChHHHHHHHHcCCCChheeeccccCCccccCccccCCcCCCcCHHHHHh
Confidence 899999 67889999999999999999999999999999999999999999999999998 99999999999999
Q ss_pred cCCCCcHHHHhhcCceEEecCCccccccccccCCCCCc-cccceeEEeecCCCceeeEEEEecCCCCCCC-CCCceecCC
Q 003050 403 SLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVC-AYASRTLLFLRSDATLKPVAIELSLPSISSD-EVNRVFLPA 480 (853)
Q Consensus 403 ~L~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~-~yAp~~Lffl~~dg~L~PIAIqL~~p~~~~~-~~~~VftP~ 480 (853)
.|+|+||+|||++|||||+||||++|||+.++|.+.++ .|||+||||++++|+|+||||||+++++.+. ..++||||+
T Consensus 468 ~L~G~TleeAl~~~rLFIlDy~dl~lp~l~~in~l~~~~~YAprtLffL~~dG~L~PlAIqL~~~p~~~~p~~~~VftP~ 547 (918)
T PLN02305 468 ELEGMTVEKAIEEKRLFILDYHDMLLPFIEKMNSLPERKAYASRTVFFYSKAGALRPIAIELSLPPTPSSPGNKFVYTHG 547 (918)
T ss_pred hcCCCcHHHHHHcCCEEEEechhhhCcccccccccCCcccccceeEEEECCCCCEeeEEEEeeCCCCCCCCCcceeeCCC
Confidence 99999999999999999999999999999999987765 9999999999999999999999999886544 457899998
Q ss_pred CCCCCchHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhHHHHHHhcccCCcCchhhcccccccccccchHHHHhhcccCC
Q 003050 481 KEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAG 560 (853)
Q Consensus 481 d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~g 560 (853)
+++++.|.|+||||||++||++|||+|+||++|||+|||||||||||||++|||||||.||||+||+||++||++|||+|
T Consensus 548 ~d~~~~w~W~LAK~~V~~aD~~~HQlisHlLrTHlv~EpfiIAT~RqLs~~HPI~kLL~PHfr~TL~INalAR~~LIn~g 627 (918)
T PLN02305 548 HDATTHWIWKLAKAHVCSNDAGVHQLVNHWLRTHACMEPYIIATHRQLSAMHPIYKLLHPHMRYTLEINALARQSLINGG 627 (918)
T ss_pred CCCCCchHHHHHHHHHHhccHHHHHHHHHHhhHHHHHHHHHHHHhccCCccCCHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 77778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCchhHHHHHHHHHhc-cccCCCCCchHHHhcCCCCCCCCCCcccccCCCCCCcchhcHHHHHHHHHHHHHhh
Q 003050 561 GILEKTLFPGKICMELSSELYKE-WRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYC 639 (853)
Q Consensus 561 Giie~~~~~G~~~~elss~~y~~-w~f~~~~lP~DL~~RGv~~~D~~~p~gl~l~l~dYpYrdDgL~IW~AI~~~V~~yv 639 (853)
|+||++|++|+++|||++++|++ |+|++++||+||++|||+++|+++||||+|.|||||||+|||+||+||++||++||
T Consensus 628 Giie~~fspg~~~~elss~aYk~~w~Fd~~~LP~DL~kRGva~~D~~~p~gl~l~ipdYPYrdDGL~IW~AIk~wV~~yV 707 (918)
T PLN02305 628 GIIEACFSPGKYAMELSSAAYKSMWRFDMEALPADLIRRGMAEEDPSMPCGVRLVIEDYPYAADGLLIWSAIKEWVESYV 707 (918)
T ss_pred CceeeeeccchhHHHHHHHHHHhcCcCccccCHHHHHHcCCCccCCCCcccccccCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCccccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHHHHHhhhccccccccccccccccccCCCCcc
Q 003050 640 SIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNRPT 719 (853)
Q Consensus 640 ~~YY~sD~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~ 719 (853)
++||++|++|++|.|||+||+||+++||+|+++.+|||+|+|+++||++||+|||+|||||||||||||+|+||+||+|+
T Consensus 708 ~~YY~~D~~V~~D~ELQaW~~Ei~~~Gh~d~kd~~~~p~l~T~~eLi~~lT~IIwtaSaqHAAVNFgQydy~gfvPN~P~ 787 (918)
T PLN02305 708 DHFYSEPNSITSDLELQAWWDEIKNKGHYDKRNEPWWPKLNTKEDLSGILTTMIWIASGQHAAINFGQYPFGGYVPNRPT 787 (918)
T ss_pred HhhCCChhhhccCHHHHHHHHHHHhcCCCCCCCCCCCcCCcCHHHHHHHHHhhhhhcchhhhhhhcCCcccccccCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCChHHHhhhhChHHHHHhhCCCHHHHHHHHHHHHhhccCCCCcccccCCCCC--CCCCcHHHHHHHHHHHH
Q 003050 720 LCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSS--EWTDDQEVLRKFEEFGE 797 (853)
Q Consensus 720 ~~r~p~P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~--~~~~d~~~~~a~~~F~~ 797 (853)
+||++||++++.+|.+|..+||+++|++||++.||+.+|+++++||+|++||+|||++.+. .|+.|+++++||++|++
T Consensus 788 ~~Rrp~P~~~~~~~~~l~~~pe~~~L~tLP~~~qa~~~mav~~iLS~hs~de~yLG~~~~~~~~w~~D~~~~~A~~rF~~ 867 (918)
T PLN02305 788 LMRKLIPQENDPDYEKFIRNPQYTFLSSLPTQLQATKVMAVQDTLSTHSPDEEYLGELRHLHSHWINDHEVVKLFNKFSA 867 (918)
T ss_pred hhcCCCCCCCCchHHHhhhChHHHHHHHCCcHHHHHHHHHHHHHhccCCCCcccccCCCCcccccccCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999875 79999999999999999
Q ss_pred HHHHHHHHHHHHhcccccccCCCCcccccccccCCCCCCCCCCCCcCCccCccccC
Q 003050 798 KLKEIEQKIAERNRNARLKNRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853 (853)
Q Consensus 798 ~L~~Ie~~I~~RN~~~~lknr~g~~~~PY~~L~P~~~~~~s~~g~t~~~IPnSIsI 853 (853)
+|++||++|++||++++||||+||+++||+||+| +|++||||+||||||||
T Consensus 868 ~L~eIE~~I~~RN~~~~lkNR~G~~~~PY~lL~P-----~s~~G~T~rgIPNSISI 918 (918)
T PLN02305 868 RLEEIEKTINERNKDIRLKNRNGAGIPPYELLLP-----TSGPGVTGRGIPNSISI 918 (918)
T ss_pred HHHHHHHHHHHHhCCccccccCCCCCCCccccCC-----CCCCCCCcCCCCCcccC
Confidence 9999999999999999999999999999999999 99999999999999998
|
|
| >PLN02337 lipoxygenase | Back alignment and domain information |
|---|
| >PLN02264 lipoxygenase | Back alignment and domain information |
|---|
| >PF00305 Lipoxygenase: Lipoxygenase; InterPro: IPR013819 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd01751 PLAT_LH2 PLAT/ LH2 domain of plant lipoxygenase related proteins | Back alignment and domain information |
|---|
| >smart00308 LH2 Lipoxygenase homology 2 (beta barrel) domain | Back alignment and domain information |
|---|
| >PF01477 PLAT: PLAT/LH2 domain; InterPro: IPR001024 Lipoxygenases (1 | Back alignment and domain information |
|---|
| >cd00113 PLAT PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain | Back alignment and domain information |
|---|
| >cd02899 PLAT_SR Scavenger receptor protein | Back alignment and domain information |
|---|
| >cd01753 PLAT_LOX PLAT domain of 12/15-lipoxygenase | Back alignment and domain information |
|---|
| >cd01756 PLAT_repeat PLAT/LH2 domain repeats of family of proteins with unknown function | Back alignment and domain information |
|---|
| >cd01754 PLAT_plant_stress PLAT/LH2 domain of plant-specific single domain protein family with unknown function | Back alignment and domain information |
|---|
| >cd01752 PLAT_polycystin PLAT/LH2 domain of polycystin-1 like proteins | Back alignment and domain information |
|---|
| >cd01757 PLAT_RAB6IP1 PLAT/LH2 domain present in RAB6 interacting protein 1 (Rab6IP1)_like family | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 853 | ||||
| 1ik3_A | 857 | Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydrope | 0.0 | ||
| 1rov_A | 857 | Lipoxygenase-3 Treated With Cumene Hydroperoxide Le | 0.0 | ||
| 2iuj_A | 853 | Crystal Structure Of Soybean Lipoxygenase-B Length | 0.0 | ||
| 3bnb_A | 839 | Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | 0.0 | ||
| 3pzw_A | 839 | Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | 0.0 | ||
| 3bnd_A | 839 | Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | 0.0 | ||
| 2sbl_B | 839 | The Three-Dimensional Structure Of An Arachidonic A | 0.0 | ||
| 3bne_A | 839 | Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | 0.0 | ||
| 3bnc_A | 839 | Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | 0.0 | ||
| 1fgr_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Leng | 0.0 | ||
| 1fgq_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Leng | 0.0 | ||
| 1fgm_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Leng | 0.0 | ||
| 1fgt_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Leng | 0.0 | ||
| 1y4k_A | 839 | Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Leng | 0.0 | ||
| 1fgo_A | 839 | Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Leng | 0.0 | ||
| 2iuk_A | 864 | Crystal Structure Of Soybean Lipoxygenase-D Length | 0.0 | ||
| 3dy5_A | 1066 | Allene Oxide Synthase 8r-Lipoxygenase From Plexaura | 6e-48 | ||
| 2fnq_A | 699 | Insights From The X-Ray Crystal Structure Of Coral | 8e-48 | ||
| 3fg1_A | 696 | Crystal Structure Of Delta413-417:gs Lox Length = 6 | 8e-48 | ||
| 3fg4_A | 696 | Crystal Structure Of Delta413-417:gs I805a Lox Leng | 2e-47 | ||
| 3fg3_A | 696 | Crystal Structure Of Delta413-417:gs I805w Lox Leng | 2e-47 | ||
| 3o8y_A | 691 | Stable-5-Lipoxygenase Length = 691 | 1e-45 | ||
| 3v98_A | 691 | S663d Stable-5-Lox Length = 691 | 1e-45 | ||
| 3v92_B | 691 | S663a Stable-5-Lox Length = 691 | 2e-45 | ||
| 3vf1_A | 698 | Structure Of A Calcium-Dependent 11r-Lipoxygenase S | 1e-44 | ||
| 3rde_A | 573 | Crystal Structure Of The Catalytic Domain Of Porcin | 1e-36 | ||
| 3d3l_A | 541 | The 2.6 A Crystal Structure Of The Lipoxygenase Dom | 3e-36 | ||
| 2p0m_A | 662 | Revised Structure Of Rabbit Reticulocyte 15s-Lipoxy | 1e-35 | ||
| 1lox_A | 662 | Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | 2e-35 |
| >pdb|1IK3|A Chain A, Lipoxygenase-3 (Soybean) Complex With 13(S)-Hydroperoxy- 9(Z),11(E)-Octadecadienoic Acid Length = 857 | Back alignment and structure |
|
| >pdb|1ROV|A Chain A, Lipoxygenase-3 Treated With Cumene Hydroperoxide Length = 857 | Back alignment and structure |
| >pdb|2IUJ|A Chain A, Crystal Structure Of Soybean Lipoxygenase-B Length = 853 | Back alignment and structure |
| >pdb|3BNB|A Chain A, Lipoxygenase-1 (Soybean) I553l Mutant Length = 839 | Back alignment and structure |
| >pdb|3PZW|A Chain A, Soybean Lipoxygenase-1 - Re-Refinement Length = 839 | Back alignment and structure |
| >pdb|3BND|A Chain A, Lipoxygenase-1 (Soybean), I553v Mutant Length = 839 | Back alignment and structure |
| >pdb|2SBL|B Chain B, The Three-Dimensional Structure Of An Arachidonic Acid 15- Lipoxygenase Length = 839 | Back alignment and structure |
| >pdb|3BNE|A Chain A, Lipoxygenase-1 (Soybean) I553a Mutant Length = 839 | Back alignment and structure |
| >pdb|3BNC|A Chain A, Lipoxygenase-1 (Soybean) I553g Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGR|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697e Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGQ|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495e Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGM|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694h Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGT|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q697n Mutant Length = 839 | Back alignment and structure |
| >pdb|1Y4K|A Chain A, Lipoxygenase-1 (Soybean) At 100k, N694g Mutant Length = 839 | Back alignment and structure |
| >pdb|1FGO|A Chain A, Lipoxygenase-1 (Soybean) At 100k, Q495a Mutant Length = 839 | Back alignment and structure |
| >pdb|2IUK|A Chain A, Crystal Structure Of Soybean Lipoxygenase-D Length = 864 | Back alignment and structure |
| >pdb|3DY5|A Chain A, Allene Oxide Synthase 8r-Lipoxygenase From Plexaura Homomalla Length = 1066 | Back alignment and structure |
| >pdb|2FNQ|A Chain A, Insights From The X-Ray Crystal Structure Of Coral 8r- Lipoxygenase: Calcium Activation Via A C2-Like Domain And A Structural Basis Of Product Chirality Length = 699 | Back alignment and structure |
| >pdb|3FG1|A Chain A, Crystal Structure Of Delta413-417:gs Lox Length = 696 | Back alignment and structure |
| >pdb|3FG4|A Chain A, Crystal Structure Of Delta413-417:gs I805a Lox Length = 696 | Back alignment and structure |
| >pdb|3FG3|A Chain A, Crystal Structure Of Delta413-417:gs I805w Lox Length = 696 | Back alignment and structure |
| >pdb|3O8Y|A Chain A, Stable-5-Lipoxygenase Length = 691 | Back alignment and structure |
| >pdb|3V98|A Chain A, S663d Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|3V92|B Chain B, S663a Stable-5-Lox Length = 691 | Back alignment and structure |
| >pdb|3VF1|A Chain A, Structure Of A Calcium-Dependent 11r-Lipoxygenase Suggests A Mechanism For Ca-Regulation Length = 698 | Back alignment and structure |
| >pdb|3RDE|A Chain A, Crystal Structure Of The Catalytic Domain Of Porcine Leukocyte 12- Lipoxygenase Length = 573 | Back alignment and structure |
| >pdb|3D3L|A Chain A, The 2.6 A Crystal Structure Of The Lipoxygenase Domain Of Human Arachidonate 12-Lipoxygenase, 12s-Type (Casp Target) Length = 541 | Back alignment and structure |
| >pdb|2P0M|A Chain A, Revised Structure Of Rabbit Reticulocyte 15s-Lipoxygenase Length = 662 | Back alignment and structure |
| >pdb|1LOX|A Chain A, Rabbit Reticulocyte 15-Lipoxygenase Length = 662 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... Length = 839 | Back alignment and structure |
|---|
Score = 847 bits (2188), Expect = 0.0
Identities = 362/820 (44%), Positives = 522/820 (63%), Gaps = 33/820 (4%)
Query: 50 GKSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHN-GTKTTTYKLKFYVEPDFGNPG 108
G+S S+Q+ S GKGK+ +L+ + G + + + F + G PG
Sbjct: 37 GRSVSLQLIS-ATKADAHGKGKVGKDTFLEGINTSLPTLGAGESAFNIHFEWDGSMGIPG 95
Query: 109 AFVIENQHKYKFFLQAATLH-APDNQAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETP 167
AF I+N + +FFL++ TL + I F C SWVY KL K+ RIFF+N +Y+PSETP
Sbjct: 96 AFYIKNYMQVEFFLKSLTLEAISNQGTIRFVCNSWVYNTKLYKSVRIFFANHTYVPSETP 155
Query: 168 STLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYP 227
+ L R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS + PYP
Sbjct: 156 APLVSYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYP 215
Query: 228 RRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEAN 287
RRGRTGR D +TE + E YVP DE K + + ++ + P
Sbjct: 216 RRGRTGRGPTVTDPNTEKQGE----VFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFE 271
Query: 288 SLLEKDPH---FRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMR 344
S + F SF ++ ++ + + ++P + K++ R ++
Sbjct: 272 SAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD-----VISTIIPLPVIKELYRTDGQHILK 326
Query: 345 FPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLA 398
FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK + S IT
Sbjct: 327 FPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQSSKITAD 386
Query: 399 DIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTS-SVCAYASRTLLFLRSDATLK 457
++ LDG + +A+ R+++LD+HD MP++ +IN S YA+RT+LFLR D TLK
Sbjct: 387 SLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLK 444
Query: 458 PVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTH 514
PVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++HWL+TH
Sbjct: 445 PVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTH 504
Query: 515 AVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKICM 574
A +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI+E T P K +
Sbjct: 505 AAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIIETTFLPSKYSV 564
Query: 575 ELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTW 634
E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W AI TW
Sbjct: 565 EMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIWAAIKTW 624
Query: 635 VKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIW 694
V++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++ I+IW
Sbjct: 625 VQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIW 684
Query: 695 TSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAI 754
+SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ + +
Sbjct: 685 IASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPT 744
Query: 755 TLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNAR 814
+S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+ RN +
Sbjct: 745 LISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVRRNNDPS 804
Query: 815 LK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
L+ NR GP ++ Y L++P ++ G+T +GIPNSISI
Sbjct: 805 LQGNRLGPVQLPYTLLYPS-----SEEGLTFRGIPNSISI 839
|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} Length = 853 | Back alignment and structure |
|---|
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} Length = 864 | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B Length = 691 | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} Length = 573 | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} Length = 1066 | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* Length = 662 | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A Length = 696 | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} Length = 541 | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} Length = 698 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 853 | |||
| 2iuk_A | 864 | SEED lipoxygenase; iron, dioxygenase, metal-bindin | 100.0 | |
| 1f8n_A | 839 | Lipoxygenase-1; dioxygenase, metalloprotein, fatty | 100.0 | |
| 2iuj_A | 853 | Lipoxygenase L-5; dioxygenase, metal-binding, oxid | 100.0 | |
| 1lox_A | 662 | 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot | 100.0 | |
| 3v98_A | 691 | Arachidonate 5-lipoxygenase; dioxygenase, oxidored | 100.0 | |
| 3fg1_A | 696 | Allene oxide synthase-lipoxygenase protein; arichi | 100.0 | |
| 3vf1_A | 698 | 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-lik | 100.0 | |
| 3dy5_A | 1066 | Allene oxide synthase-lipoxygenase protein; fusion | 100.0 | |
| 3rde_A | 573 | Arachidonate 12-lipoxygenase, 12S-type; C-terminal | 100.0 | |
| 3d3l_A | 541 | Arachidonate 12-lipoxygenase, 12S-type; ALOX12, ir | 100.0 | |
| 2wxu_A | 370 | Phospholipase C; cytolysis, hydrolase, hemolysis, | 98.57 | |
| 1olp_A | 370 | Alpha-toxin; zinc phospholipase C, GAS gangrene de | 98.52 | |
| 3cwz_B | 384 | RAB6IP1, RAB6-interacting protein 1; RAB small GTP | 96.0 |
| >2iuk_A SEED lipoxygenase; iron, dioxygenase, metal-binding, oxidoreductase, oxylipin biosynthesis, soybean lipoxygenase-D, fatty acid biosynthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-250 Score=2177.04 Aligned_cols=795 Identities=46% Similarity=0.844 Sum_probs=766.6
Q ss_pred ECCCCCCCCCCceEEEEEeccccCCCCCCcccCcccccccccccCCC-CCceEEEEEEEecCCCCCCceEEEEEecCCCc
Q 003050 41 DHSPGQSGPGKSASVQIFSCTKVDPGTGKGKLSHIAYLKNGKSHKHN-GTKTTTYKLKFYVEPDFGNPGAFVIENQHKYK 119 (853)
Q Consensus 41 ~~d~~~~~~g~~v~lqlvs~~~~~~~~~~gk~s~~~~l~~~~~~~~~-~~~~~~y~v~f~~~~~~G~pgai~v~n~~~~e 119 (853)
.+|.+++++|++|+|||||++. ||+||+||+|+++.|++|...... ++++++|+|+|.||++||+||||+|+|.|++|
T Consensus 54 ~~d~~~~~~g~~v~lqlvs~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~fg~pgA~~v~n~~~~e 132 (864)
T 2iuk_A 54 VIDTATSFLGRNISMQLISATQ-TDGSGNGKVGKEVYLEKHLPTLPTLGARQDAFSIFFEWDASFGIPGAFYIKNFMTDE 132 (864)
T ss_dssp -CCSGGGSCSTTEEEEEEEEEE-ECSSSCEEEEEEEECCEEECSCSSCCTTCEEEEEEECCCSTTCCEEEEEEEECSSSC
T ss_pred hhhhHHHhccCeEEEEEEeccc-CCCCCCCcCCCcccccccccCCCcCCCCcEEEEEEEEeeccCCCcceEEEEeCCCCc
Confidence 4689999999999999999985 588999999999999999854443 67789999999999999999999999999999
Q ss_pred eeeeEEEEecCCC-CeEEEEeccccccCCCCCcceeEecCcccccCCCChhhHHHHHHHHHHhhCCCCCCccccCeeeec
Q 003050 120 FFLQAATLHAPDN-QAIHFDCRSWVYPIKLTKTPRIFFSNKSYLPSETPSTLKDLRKQELISLRGDGTGERKEWERIYDY 198 (853)
Q Consensus 120 ~~l~~i~l~~~p~-~~~~Fpc~sWv~~~~~~~~~riff~~~~yLp~~tp~~L~~~R~~EL~~lrg~g~g~r~~~driYdy 198 (853)
|||++|+|+++|+ |++||+||||||+.++|+.+||||+||+|||++||++|+++||+||++|||||+||||+|||||||
T Consensus 133 ~~l~~~~l~~~~~~~~~~f~cnswv~~~~~~~~~RifF~n~~ylp~~tp~~l~~~R~~el~~lrg~g~g~rk~~driydy 212 (864)
T 2iuk_A 133 FFLVSVKLEDIPNHGTIEFVCNSWVYNFRSYKKNRIFFVNDTYLPSATPAPLLKYRKEEFEVLRGDGTGKRKDFDRIYDY 212 (864)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEEECBGGGSSSCEEEEBSCCCCTTTSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCE
T ss_pred eEEEEEEEecCCCCCcEEEecCccccCCCCCCCCceeccCCCcCcccCcHHHHHHHHHHHHHhcCCCCCcccccccchhh
Confidence 9999999999995 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCccccCCCCCCCcccccchhhhhHHHH
Q 003050 199 DYYNDLGDPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRAS 278 (853)
Q Consensus 199 ~~yndlG~pd~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~~~e~~~~~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~ 278 (853)
|+|||||+||++++ |||||||++|||||||||||+|+++||.+|+|+ .+||||||+|++.|.+||.++++|++
T Consensus 213 d~yndlg~pd~~~~--rpvlggs~~~pyPrR~rtgr~~~~~dp~~e~~~-----~~yvPrDe~F~~~K~~~f~~~~~k~~ 285 (864)
T 2iuk_A 213 DVYNDLGNPDGGDP--RPILGGCSIYPYPLRVRTGRERTRTDPNSEKPG-----EVYVPRDENFGHLKSSDFLTYGIKSL 285 (864)
T ss_dssp ECBCCSCBGGGTBC--CCCBSSSSSSCCCCEECCCCCBCSSCTTSBCCC-----CCCCCGGGSCCCSSGGGCHHHHHHHH
T ss_pred hhhhcCCCcccCCC--CcccCCCCCCCCCccccCCCCCCCCCCCccccc-----cCCCCCCcccCcchHHHHHHHHHHHH
Confidence 99999999999988 999999999999999999999999999999996 28999999999999999999999999
Q ss_pred HhhhhHHHhhhhc----CCCCCCCHHHHHhhccCCCCcccchhhHHHHhhhchHHHHHHHhhcCCCCCCCCCCccccccc
Q 003050 279 LHFLIPEANSLLE----KDPHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQITRASKGDPMRFPEPQIIANN 354 (853)
Q Consensus 279 ~~~~~p~l~~~~~----~~~~f~sf~di~~ly~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~k~p~P~v~~~~ 354 (853)
++.++|.|+++++ ...+|+||+||++||++|++||.. .+++.+|++++|+++++++|+++|||+|+||+.|
T Consensus 286 ~~~~~p~l~~~~~~~~~~~~~f~sf~di~~ly~~g~~l~~~-----~~~~~~p~~~~~~~~~~~~e~~lk~p~P~vi~~~ 360 (864)
T 2iuk_A 286 SHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTD-----ILSQISPLPALKEIFRTDGENVLQFPPPHVAKVS 360 (864)
T ss_dssp HHTTHHHHHHHHHSSCSSCSSCCSHHHHHTTTSSCEECCHH-----HHHHHSSCTTTTTTCBCTTSSEEBCCCCSSCSCS
T ss_pred HHHHHHHHHHHhcccccCcCCCCCHHHHHHHHhccccCchh-----hhcccCcHHHHHHHhhccccchhcCCCcceeccc
Confidence 9999999999884 467999999999999999999863 4556689999999988899999999999999999
Q ss_pred cccccchHHHHHHHhhCCCcccccccccCCCCCC------CCCCCCCchhhhhccCCCCcHHHHhhcCceEEecCCcccc
Q 003050 355 DLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKMSSITLADIEGSLDGLDITQAMNQWRIYILDHHDYLM 428 (853)
Q Consensus 355 ~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~------g~~~~~it~e~i~~~L~G~tl~~al~~grLFi~Dy~d~~l 428 (853)
+++|++|++||||+|||+||++|+||++||++|+ |+++|+||+|||+..|+|+||++||++|||||+||||++|
T Consensus 361 ~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~ldp~~yg~~~s~it~e~i~~~l~g~tl~eal~~grLFi~Dy~d~~l 440 (864)
T 2iuk_A 361 KSGVMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTSTITKEQLEINMGGVTVEEALSTQRLFILDYQDAFI 440 (864)
T ss_dssp SSSSSCHHHHHHHHHHSSSCSCCEECSSSSCCCCSCHHHHCCCCCCCCHHHHGGGTTTCCHHHHHHTTCEEEEECHHHHG
T ss_pred chhhhchHHHHHHHhcCCCchhhhhhhccCCcccCChhhcCCcccccCHHHHhhccCCCcHHHHHhcCCEEEecchhhhc
Confidence 9999999999999999999999999999999997 9999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCc-cccceeEEeecCCCceeeEEEEecCCCCCCC---CCCceecCCCCCCCchHHHHHHHHHHhhhhhhH
Q 003050 429 PFLSRINTSSVC-AYASRTLLFLRSDATLKPVAIELSLPSISSD---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYH 504 (853)
Q Consensus 429 p~l~~in~~~~~-~yAp~~Lffl~~dg~L~PIAIqL~~p~~~~~---~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~H 504 (853)
||+.++|+++++ .|||+||||++++|+|+||||||++|++.++ +.++||||+|+++++|+|+|||+||++||+++|
T Consensus 441 p~l~~in~~~~~~~YAp~~Lffl~~dG~L~PlAIqLs~p~~~~~~~~~~~~VftP~dd~~~~~~W~LAK~~v~~aD~~~H 520 (864)
T 2iuk_A 441 PYLTRINSLPTAKAYATRTILFLKDDGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYH 520 (864)
T ss_dssp GGHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEEECCSSSSSSCCEEEEECCCSSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhcccCCCceeecceEEEEEcCCCCEeEEEEEeeCCCCCccccCCCCCeECCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 999999987766 9999999999999999999999999875433 568999999877778999999999999999999
Q ss_pred HHHHHHhhhhhhhhHHHHHHhcccCCcCchhhcccccccccccchHHHHhhcccCCccccccccCchhHHHHHHHHHhcc
Q 003050 505 QLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLFPGKICMELSSELYKEW 584 (853)
Q Consensus 505 qlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~lAR~~LI~~gGiie~~~~~G~~~~elss~~y~~w 584 (853)
|+++||++||++||||+|||+||||.+|||||||.||||+||+||++||+.|||+||++|++|++|+++|||++++|++|
T Consensus 521 qlisHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~IN~~AR~~LI~~gGiie~~~~~G~~~~elss~ayk~w 600 (864)
T 2iuk_A 521 QLVSHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLPGKYSIEMSSSVYKNW 600 (864)
T ss_dssp HHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHHHHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTTC
T ss_pred HHHHhhhhhhHHHHHHHHHHhccCCccCchHHhhHHHHHHHHHHHHHHHHhccCCCCceeeeccCchhHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCchHHHhcCCCCCCCCCCcccccCCCCCCcchhcHHHHHHHHHHHHHhhccccCCCccccCCHHHHHHHHHHHH
Q 003050 585 RFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVWLAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIRE 664 (853)
Q Consensus 585 ~f~~~~lP~DL~~RGv~~~D~~~p~gl~l~l~dYpYrdDgL~IW~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~ 664 (853)
+|++++||+||++|||+++|+++||||||.|||||||+|||+||+||++||++||++||++|++|++|.||||||+||++
T Consensus 601 ~f~~~~LP~DL~~RGva~~D~~~p~gl~l~ipdYpYadDGL~iW~AIk~~V~~yV~~YY~sD~~V~~D~ELQaW~~Ei~~ 680 (864)
T 2iuk_A 601 VFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSLYYPTDAAVQQDTELQAWWKEAVE 680 (864)
T ss_dssp CGGGSSHHHHHHHTTSEEECSSSTTSEEESSSCCHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHCHHHHHHHHHHHH
T ss_pred CCccccCcHHHHhcCCCCCCccccccccccCCCCCccccHHHHHHHHHHHHHHHHHHHcCCchhhcCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCCCCCCCCCCCHHHHHHHHHHHhhhccccccccccccccccccCCCCcccccccCCCCCChHHHhhhhChHHHH
Q 003050 665 VGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYY 744 (853)
Q Consensus 665 ~G~gd~k~~~~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy~y~gf~PN~P~~~r~p~P~~g~~~~~~l~~~pe~~~ 744 (853)
+||+|+++++|||+|+|+++||++||+|||+||+||||||||||+|+||+||+|++||+|||++|+.+|++|+.+||+++
T Consensus 681 ~Gh~d~kd~~~~P~l~T~~eLi~~lT~IIf~aSaqHAAVNFgQydy~gfvPN~P~~~r~p~P~~G~~~~~~l~~~pe~~~ 760 (864)
T 2iuk_A 681 KGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAY 760 (864)
T ss_dssp TTTGGGTTCTTCCCSSSHHHHHHHHHHHHHHHTHHHHHHHTTHHHHHTSTTTSCCCCCSCCCCTTSHHHHHHHHCHHHHH
T ss_pred cCCCCCCCCCCCCCcCCHHHHHHHhheeeecccchhhhhccccchhhcccCCCChhhcCCCCCCCchhHhhhhhChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCHHHHHHHHHHHHhhccCCCCcccccCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCccc
Q 003050 745 LKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAERNRNARLKNRWGPAKI 824 (853)
Q Consensus 745 L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknr~g~~~~ 824 (853)
|++||++.||+.+|+++++||+|++||+|||+|++.+|++|+++++|+++|+++|++||++|++||++++||||+|++++
T Consensus 761 L~tLP~~~qa~~~m~l~~lLS~h~~de~yLG~~~~~~~~~d~~~~~a~~~F~~~L~~Ie~~I~~RN~~~~lknR~g~~~l 840 (864)
T 2iuk_A 761 LRTITPKFETLIDLSVIEILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGPVQL 840 (864)
T ss_dssp HTTSCCHHHHHHHHHHHHHHTCCCSSCCBTTCCSCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHSSCTTCGGGTGGGTC
T ss_pred HHhCCCHHHHHHHHHHHHHHhcCCCCcccccccCccccccCHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCCCCC
Confidence 99999999999999999999999999999999998889999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCcCCccCccccC
Q 003050 825 AYKLMHPDTSNVKNDGGITGKGIPNSISI 853 (853)
Q Consensus 825 PY~~L~P~~~~~~s~~g~t~~~IPnSIsI 853 (853)
||+||+| +|++|||||+|||||||
T Consensus 841 PY~yL~P-----~s~~g~t~~~IPNSIsI 864 (864)
T 2iuk_A 841 PYTLLHR-----SSEEGLTFKGIPNSISI 864 (864)
T ss_dssp CCCTTCS-----CCCSSSCSCCCBSSCCC
T ss_pred CceeeCC-----CCCCCcccCCCCCcccC
Confidence 9999999 89999999999999998
|
| >1f8n_A Lipoxygenase-1; dioxygenase, metalloprotein, fatty acids, oxidoreductase; 1.40A {Glycine max} SCOP: a.119.1.1 b.12.1.1 PDB: 1yge_A 2sbl_B 3pzw_A 1fgq_A 1fgr_A 3bnd_A 1fgt_A 1fgm_A 3bnb_A 1fgo_A 1y4k_A 3bne_A 3bnc_A 1ik3_A* 1hu9_A* 1jnq_A* 1lnh_A 1n8q_A* 1no3_A* 1rrh_A ... | Back alignment and structure |
|---|
| >2iuj_A Lipoxygenase L-5; dioxygenase, metal-binding, oxidoreductase, soybean lipoxygenase-B, fatty acid biosynthesis, lipid synthesis; 2.4A {Glycine max} | Back alignment and structure |
|---|
| >1lox_A 15-lipoxygenase, 15LOX; oxidoreductase, 15LO_depot2; HET: RS7; 2.40A {Oryctolagus cuniculus} SCOP: a.119.1.2 b.12.1.1 PDB: 2p0m_A* | Back alignment and structure |
|---|
| >3v98_A Arachidonate 5-lipoxygenase; dioxygenase, oxidoreductase; 2.07A {Homo sapiens} PDB: 3v99_A* 3o8y_A 3v92_B | Back alignment and structure |
|---|
| >3fg1_A Allene oxide synthase-lipoxygenase protein; arichidonic metabolism, dioxygenase, fatty ACI biosynthesis, heme, iron, lipid synthesis, lyase; HET: GOL; 1.85A {Plexaura homomalla} PDB: 3fg4_A* 3fg3_A* 2fnq_A | Back alignment and structure |
|---|
| >3vf1_A 11R-lipoxygenase; LOX, PLAT, beta sandwich, C2-like domain, non-heme iron, conformational change, dioxygenase, oxidoreductase; HET: SUC; 2.47A {Gersemia fruticosa} | Back alignment and structure |
|---|
| >3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla} | Back alignment and structure |
|---|
| >3rde_A Arachidonate 12-lipoxygenase, 12S-type; C-terminal domain, protein-inhibitor complex, oxapentadeca-4-YNE)phenylpropanoic acid; HET: OYP; 1.89A {Sus scrofa} | Back alignment and structure |
|---|
| >3d3l_A Arachidonate 12-lipoxygenase, 12S-type; ALOX12, iron-binding protein, 12-LOX, platelet-type lipoxygenase 12, structural genomics; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2wxu_A Phospholipase C; cytolysis, hydrolase, hemolysis, membrane binding, virulence gangrene determinant, C2 domain; 1.80A {Clostridium perfringens} PDB: 2wy6_A 2wxt_A 1qm6_A 1qmd_A 1ca1_A 1gyg_A 1kho_A | Back alignment and structure |
|---|
| >1olp_A Alpha-toxin; zinc phospholipase C, GAS gangrene determinant, membrane binding, calcium binding, hydrolase; 2.5A {Clostridium absonum} SCOP: a.124.1.1 b.12.1.3 | Back alignment and structure |
|---|
| >3cwz_B RAB6IP1, RAB6-interacting protein 1; RAB small GTPase, RAB-binding domain, guanosine 5' triphosphate, RUN, RPIP8, UNC-14, nesca PLAT; HET: GTP; 3.20A {Mus musculus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 853 | ||||
| d3bnea1 | 690 | a.119.1.1 (A:150-839) Lipoxigenase, C-terminal dom | 0.0 | |
| d2p0ma1 | 551 | a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Ory | 1e-170 | |
| d3bnea2 | 143 | b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Gl | 5e-37 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 690 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Score = 834 bits (2157), Expect = 0.0
Identities = 322/706 (45%), Positives = 460/706 (65%), Gaps = 30/706 (4%)
Query: 162 LPSETPSTLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGS 221
+PSETP+ L + R++EL SLRG+GTGERKE++RIYDYD YNDLG+PD + ARPVLGGS
Sbjct: 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGS 60
Query: 222 ESLPYPRRGRTGRPKCRADLSTESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHF 281
+ PYPRRGRTGR D +TE + E YVP DE K + + ++
Sbjct: 61 STFPYPRRGRTGRGPTVTDPNTEKQGEVF----YVPRDENLGHLKSKDALEIGTKSLSQI 116
Query: 282 LIPEANSLL---EKDPHFRSFDEIRGMFSSNKSRKVEGWLTKKLQKLLPEQLFKQITRAS 338
+ P S F SF ++ ++ + ++P + K++ R
Sbjct: 117 VQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLP-----RDVISTIIPLPVIKELYRTD 171
Query: 339 KGDPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKM 392
++FP+P ++ + AW DEEF R+M+AG+NP IR LE FPPK +
Sbjct: 172 GQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQS 231
Query: 393 SSITLADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTS-SVCAYASRTLLFLR 451
S IT ++ LDG + +A+ R+++LD+HD MP++ +IN S YA+RT+LFLR
Sbjct: 232 SKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLR 289
Query: 452 SDATLKPVAIELSLPSISSDE---VNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVT 508
D TLKPVAIELSLP + D V++V LPAKEG+E+ +W LAKA+V+ NDS YHQL++
Sbjct: 290 EDGTLKPVAIELSLPHSAGDLSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMS 349
Query: 509 HWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHVNALARSILLNAGGILEKTLF 568
HWL+THA +EPFVIAT R LSV+HP+++LL PH+++ M++NALAR L+NA GI E T
Sbjct: 350 HWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNINALARQSLINANGIAETTFL 409
Query: 569 PGKICMELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVW 628
P K +E+SS +YK W F +QALP DLIKR +A++D P G ++L +DYPY DGL++W
Sbjct: 410 PSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIW 469
Query: 629 LAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQA 688
AI TWV++Y ++Y DD VK+D E+Q WWKE E GHGD ++ WW ++ + ++L++
Sbjct: 470 AAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEV 529
Query: 689 LTILIWTSSALHASVNFGQYAYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKML 748
I+IW +SALHA+VNFGQY Y NRPT R+ +P++GT E+ E++ + +K YL+ +
Sbjct: 530 CLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTI 589
Query: 749 PERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEVLRKFEEFGEKLKEIEQKIAE 808
+ +S +++E+LS H SDEVYLGQR + WT D + L+ F++FG KLKEIE+K+
Sbjct: 590 TSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKALQAFQKFGNKLKEIEEKLVR 649
Query: 809 RNRNARLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853
RN + L+ NR GP ++ Y L++P ++ G+T +GIPNSISI
Sbjct: 650 RNNDPSLQGNRLGPVQLPYTLLYPS-----SEEGLTFRGIPNSISI 690
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 551 | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} Length = 143 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 853 | |||
| d3bnea1 | 690 | Lipoxigenase, C-terminal domain {Soybean (Glycine | 100.0 | |
| d2p0ma1 | 551 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 100.0 | |
| d3bnea2 | 143 | Plant lipoxigenase {Soybean (Glycine max), isozyme | 100.0 | |
| d2p0ma2 | 111 | 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [T | 98.14 | |
| d1olpa2 | 121 | Alpha-toxin, C-terminal domain {Clostridium absonu | 98.09 | |
| d1ca1a2 | 121 | Alpha-toxin, C-terminal domain {Clostridium perfri | 97.83 | |
| d1rp1a1 | 113 | Pancreatic lipase, C-terminal domain {Dog (Canis f | 93.64 | |
| d1bu8a1 | 114 | Pancreatic lipase, C-terminal domain {Rat (Rattus | 92.14 | |
| d1gpla1 | 112 | Pancreatic lipase, C-terminal domain {Guinea pig ( | 80.73 |
| >d3bnea1 a.119.1.1 (A:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Lipoxigenase superfamily: Lipoxigenase family: Plant lipoxigenases domain: Lipoxigenase, C-terminal domain species: Soybean (Glycine max), isozyme L1 [TaxId: 3847]
Probab=100.00 E-value=4.4e-216 Score=1860.68 Aligned_cols=676 Identities=47% Similarity=0.897 Sum_probs=657.4
Q ss_pred ccCCCChhhHHHHHHHHHHhhCCCCCCccccCeeeeccccCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCC
Q 003050 162 LPSETPSTLKDLRKQELISLRGDGTGERKEWERIYDYDYYNDLGDPDIGPENARPVLGGSESLPYPRRGRTGRPKCRADL 241 (853)
Q Consensus 162 Lp~~tp~~L~~~R~~EL~~lrg~g~g~r~~~driYdy~~yndlG~pd~~~~~~rpvlggs~~~pyprr~rtgr~~~~~d~ 241 (853)
||++||++|+++||+||++|||||+||||+||||||||||||||+||++++++|||||||++|||||||||||+||++||
T Consensus 1 lp~~tp~~l~~~r~~el~~lrg~g~g~~~~~driydy~~yndlg~pd~~~~~~rp~lgg~~~~pyprr~rtgr~~~~~dp 80 (690)
T d3bnea1 1 VPSETPAPLVEYREEELKSLRGNGTGERKEYDRIYDYDVYNDLGNPDKSEKLARPVLGGSSTFPYPRRGRTGRGPTVTDP 80 (690)
T ss_dssp CGGGSCGGGHHHHHHHHHHHHCCSCSCCCTTCCCCCEECBCSSCCTTTCGGGCCCCBSSSSSSCCCCEECCCCCBCSSCT
T ss_pred CCccccHHHHHHHHHHHHHhCCCCCCCCCcccccccccccccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCccccCCCCCCCcccccchhhhhHHHHHhhhhHHHhhhhcC---CCCCCCHHHHHhhccCCCCcccchhh
Q 003050 242 STESRPEKINLDIYVPPDERFSPKKLSEFIGNSIRASLHFLIPEANSLLEK---DPHFRSFDEIRGMFSSNKSRKVEGWL 318 (853)
Q Consensus 242 ~~e~~~~~~~~~~yvPrDe~f~~~K~~~f~~~~~~~~~~~~~p~l~~~~~~---~~~f~sf~di~~ly~~~~~~~~~~~~ 318 (853)
.+|+|.. .+||||||+|+++|++||+++++|+++|.++|.|+++++. .++|+||+||++||++|+++|.+
T Consensus 81 ~~e~r~~----~~yvPrde~f~~~k~~~f~~~~~~~~~~~~~p~~~~~~~~~~~~~~f~~f~~i~~ly~~g~~~~~~--- 153 (690)
T d3bnea1 81 NTEKQGE----VFYVPRDENLGHLKSKDALEIGTKSLSQIVQPAFESAFDLKSTPIEFHSFQDVHDLYEGGIKLPRD--- 153 (690)
T ss_dssp TSBCCCS----SCCCCGGGSCCCSSGGGCHHHHHHHHHHTHHHHHHHHHHTTSSCSSCCSHHHHHGGGTTCEECCHH---
T ss_pred CcccCCC----CCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHhccccCchh---
Confidence 9999975 5899999999999999999999999999999999998752 57999999999999999998864
Q ss_pred HHHHhhhchHHHHHHHhhcCCCCCCCCCCccccccccccccchHHHHHHHhhCCCcccccccccCCCCCC------CCCC
Q 003050 319 TKKLQKLLPEQLFKQITRASKGDPMRFPEPQIIANNDLAWKEDEEFGRQMLAGINPTRIRCLEAFPPKGK------NGKM 392 (853)
Q Consensus 319 ~~~~~~~~p~~~~~~~~~~~~~~~~k~p~P~v~~~~~~~W~~DeeFarQ~LaG~NP~~I~r~~e~P~~s~------g~~~ 392 (853)
.+++.+|+++++++++++++.+||||+|+||++|+++|++|+|||||+|||+||++|+||++||++++ |++.
T Consensus 154 --~~~~~~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~W~~D~eFarQ~LaG~NP~~Irr~~e~P~~~~l~~~~~g~~~ 231 (690)
T d3bnea1 154 --VISTIIPLPVIKELYRTDGQHILKFPQPHVVQVSQSAWMTDEEFAREMIAGVNPCVIRGLEEFPPKSNLDPAIYGDQS 231 (690)
T ss_dssp --HHHHHTTSTTGGGGCEECSSSEEECCCCGGGSSCSSGGGSHHHHHHHHHHSSSTTCCEECCSSSCCCCSCHHHHCCCC
T ss_pred --hhhhcccHHHHHHHhhccccceeecCCchhhhccccccccHHHHHHHHhcCCCchheeeccccCCcCCCCHHHhCchh
Confidence 56778999999999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred CCCchhhhhccCCCCcHHHHhhcCceEEecCCccccccccccCCCCCc-cccceeEEeecCCCceeeEEEEecCCCCCCC
Q 003050 393 SSITLADIEGSLDGLDITQAMNQWRIYILDHHDYLMPFLSRINTSSVC-AYASRTLLFLRSDATLKPVAIELSLPSISSD 471 (853)
Q Consensus 393 ~~it~e~i~~~L~G~tl~~al~~grLFi~Dy~d~~lp~l~~in~~~~~-~yAp~~Lffl~~dg~L~PIAIqL~~p~~~~~ 471 (853)
++||.++++ ++|+||++||++|||||+||||+++|++.++|...++ .|||+||||++++|+|+||||||+++++.++
T Consensus 232 s~it~~~i~--l~G~Tl~~Al~~grLFi~Dy~dl~~~~~~~i~~~~~~~~~A~~~Lffl~~dG~L~PiAIqL~~~~~~~~ 309 (690)
T d3bnea1 232 SKITADSLD--LDGYTMDEALGSRRLFMLDYHDIFMPYVRQINQLNSAKTYATRTILFLREDGTLKPVAIELSLPHSAGD 309 (690)
T ss_dssp CCCCGGGCC--CTTCCHHHHHHTTCEEEEECHHHHHHHHHHHHTSTTCCCCEEEEEEEECTTSCEEEEEEEEECCCCTTC
T ss_pred hhhhHhhhc--cCccHHHHHHHcCCEEEEechhhhccccccccCcCCceeecchhheeECCCCCcccEEEEecCCCCCcc
Confidence 999999995 7899999999999999999999999999999987655 9999999999999999999999999986543
Q ss_pred ---CCCceecCCCCCCCchHHHHHHHHHHhhhhhhHHHHHHHhhhhhhhhHHHHHHhcccCCcCchhhcccccccccccc
Q 003050 472 ---EVNRVFLPAKEGIEAALWQLAKAHVLANDSAYHQLVTHWLHTHAVVEPFVIATRRQLSVMHPVHRLLDPHFKDTMHV 548 (853)
Q Consensus 472 ---~~~~VftP~d~~~~~~~W~LAK~~v~~aD~~~HqlisHllrTHlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~I 548 (853)
+.++||||+|+++++|.|+|||+||++||+++||+|+||++||++||||||||+||||.+|||||||.||||+||+|
T Consensus 310 ~~~~~~~VftP~d~~~~~~~W~lAK~~v~~aD~~~HqlvsHll~THlv~Epf~IAt~RqLs~~HPI~kLL~PHfr~Tl~I 389 (690)
T d3bnea1 310 LSAAVSQVVLPAKEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAAMEPFVIATHRHLSVLHPIYKLLTPHYRNNMNI 389 (690)
T ss_dssp CCCCCCEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTHHHHHHHHHHHHHHSCTTCHHHHHHGGGGTTHHHH
T ss_pred cCCCCCceeCCCCCCccchHHHHHHHHHHHhhHHHHHHHHhhhhhhhHHHHHHHHHHhcCCccCCHHHhcchhhhhhHHH
Confidence 67999999998777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhcccCCccccccccCchhHHHHHHHHHhccccCCCCCchHHHhcCCCCCCCCCCcccccCCCCCCcchhcHHHH
Q 003050 549 NALARSILLNAGGILEKTLFPGKICMELSSELYKEWRFDEQALPKDLIKRRLALEDSDLPTGCQILFQDYPYGLDGLDVW 628 (853)
Q Consensus 549 N~lAR~~LI~~gGiie~~~~~G~~~~elss~~y~~w~f~~~~lP~DL~~RGv~~~D~~~p~gl~l~l~dYpYrdDgL~IW 628 (853)
|++||++|||+||++|+++++|+++|||++++|++|+|++++||+||++|||+++|+++|||++|.|||||||||||+||
T Consensus 390 N~~AR~~LI~~gGiie~~~~~~~~~~el~~~ayk~w~f~~~~lP~dL~~RGv~~~d~~~p~g~~l~ipdYPYrdDgL~iW 469 (690)
T d3bnea1 390 NALARQSLINANGIAETTFLPSKYSVEMSSAVYKNWVFTDQALPADLIKRGVAIKDPSTPHGVRLLIEDYPYAADGLEIW 469 (690)
T ss_dssp HHHHHHHTSSTTSHHHHHSTTGGGHHHHHHHHHTTCCGGGGSHHHHHHHTTSEEECTTSTTSEEESSSSCHHHHHHHHHH
T ss_pred HHHHHHhccCCCCeeeecccCchhHHHHHHHHHhcCcccccCCHHHHHHcCCCcccccccccccccCCCCchhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhccccCCCccccCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCHHHHHHHHHHHhhhccccccccccccc
Q 003050 629 LAIMTWVKDYCSIFYKDDDSVKSDEEIQAWWKEIREVGHGDKRNASWWFEMNSRDNLIQALTILIWTSSALHASVNFGQY 708 (853)
Q Consensus 629 ~AI~~~V~~yv~~YY~sD~~V~~D~ELQaW~~Ei~~~G~gd~k~~~~~P~l~T~~~Li~~lT~iI~~aSaqHAAVNfgQy 708 (853)
+||++||++||++||++|++|++|.|||+||+||+++|||++++.+|||+|+|+++||++||+|||+|||||||||||||
T Consensus 470 ~AI~~~V~~yv~~YY~~D~~V~~D~ELQaW~~Ei~~~G~gd~kd~~~~p~l~T~~eLv~~lT~iIf~aSaqHAAVNfgQy 549 (690)
T d3bnea1 470 AAIKTWVQEYVPLYYARDDDVKNDSELQHWWKEAVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQY 549 (690)
T ss_dssp HHHHHHHHHHGGGTCSSHHHHHTCHHHHHHHHHHHHTTTGGGTTCTTSCCCCSHHHHHHHHHHHHHHHTHHHHHHHTTHH
T ss_pred HHHHHHHHHHhhhccCCccccccCHHHHHHHHHHhcccCCCCCCCCCCCCCCCHHHHHHHHHHHHhhccHHHhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCcccccccCCCCCChHHHhhhhChHHHHHhhCCCHHHHHHHHHHHHhhccCCCCcccccCCCCCCCCCcHHH
Q 003050 709 AYAAYPPNRPTLCRKFIPDEGTQEFAELLIDSDKYYLKMLPERFAITLSTALVEVLSRHTSDEVYLGQRQSSEWTDDQEV 788 (853)
Q Consensus 709 ~y~gf~PN~P~~~r~p~P~~g~~~~~~l~~~pe~~~L~~LP~~~qa~~~m~~~~~LS~~~~de~yLG~~~~~~~~~d~~~ 788 (853)
+|+||+||+|++||++||++++++|+++..+||+++|++||++.||+.+|+++++||+|++||+|||+|++.+|+.|+++
T Consensus 550 ~y~gfvPN~P~~~r~~~P~~~~~~~~~~~~~~e~~~L~tLP~~~qa~~~~~~~~~LS~~~~de~yLG~~~~~~~~~D~~~ 629 (690)
T d3bnea1 550 PYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITSKLPTLISLSVIEILSTHASDEVYLGQRDNPHWTSDSKA 629 (690)
T ss_dssp HHHSSTTTSCCCBCCCCCCTTSHHHHHHHHCHHHHHHHHBCCHHHHHHHHHHHHHHTCBCTTCCBTTCCSCTTSCSCHHH
T ss_pred cccCcCCCCChHhcCCCCCCCChhhhhhhhchHHHHHHhCCcHHHHHHHHHHHHHhccCCCCcccCCCCCCcccccChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccc-cCCCCcccccccccCCCCCCCCCCCCcCCccCccccC
Q 003050 789 LRKFEEFGEKLKEIEQKIAERNRNARLK-NRWGPAKIAYKLMHPDTSNVKNDGGITGKGIPNSISI 853 (853)
Q Consensus 789 ~~a~~~F~~~L~~Ie~~I~~RN~~~~lk-nr~g~~~~PY~~L~P~~~~~~s~~g~t~~~IPnSIsI 853 (853)
++|+++|+++|++||++|++||+++++| ||+|++++||+||+| +|++|||||||||||||
T Consensus 630 ~~a~~~F~~~L~~Ie~~I~~RN~~~~~~~nr~g~~~~PY~~L~P-----s~~~g~t~~gIPnSIsI 690 (690)
T d3bnea1 630 LQAFQKFGNKLKEIEEKLVRRNNDPSLQGNRLGPVQLPYTLLYP-----SSEEGLTFRGIPNSISI 690 (690)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHTTTTTCCCCTTCS-----CCCSBSCSCCCBSSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcccccccCCCCCCCccccCC-----CCCCCcCcCCCCCcccC
Confidence 9999999999999999999999999999 999999999999999 99999999999999998
|
| >d2p0ma1 a.119.1.2 (A:113-663) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d3bnea2 b.12.1.1 (A:7-149) Plant lipoxigenase {Soybean (Glycine max), isozyme L1 [TaxId: 3847]} | Back information, alignment and structure |
|---|
| >d2p0ma2 b.12.1.1 (A:2-112) 15-Lipoxygenase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1olpa2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium absonum [TaxId: 29369]} | Back information, alignment and structure |
|---|
| >d1ca1a2 b.12.1.3 (A:250-370) Alpha-toxin, C-terminal domain {Clostridium perfringens, different strains [TaxId: 1502]} | Back information, alignment and structure |
|---|
| >d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d1bu8a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|