Citrus Sinensis ID: 003055
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 852 | 2.2.26 [Sep-21-2011] | |||||||
| P53536 | 1003 | Alpha-1,4 glucan phosphor | N/A | no | 0.988 | 0.839 | 0.791 | 0.0 | |
| P27598 | 955 | Alpha-1,4 glucan phosphor | N/A | no | 0.967 | 0.862 | 0.795 | 0.0 | |
| P04045 | 966 | Alpha-1,4 glucan phosphor | N/A | no | 0.969 | 0.855 | 0.782 | 0.0 | |
| Q9LIB2 | 962 | Alpha-glucan phosphorylas | yes | no | 0.947 | 0.838 | 0.776 | 0.0 | |
| P53535 | 974 | Alpha-1,4 glucan phosphor | N/A | no | 0.977 | 0.855 | 0.751 | 0.0 | |
| Q9SD76 | 841 | Alpha-glucan phosphorylas | no | no | 0.474 | 0.480 | 0.665 | 1e-165 | |
| P53537 | 842 | Alpha-glucan phosphorylas | N/A | no | 0.490 | 0.496 | 0.646 | 1e-164 | |
| P32811 | 838 | Alpha-glucan phosphorylas | N/A | no | 0.470 | 0.478 | 0.646 | 1e-163 | |
| Q9LKJ3 | 832 | Alpha-glucan phosphorylas | N/A | no | 0.470 | 0.481 | 0.641 | 1e-162 | |
| Q00766 | 853 | Glycogen phosphorylase 1 | yes | no | 0.461 | 0.460 | 0.501 | 1e-115 |
| >sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1404 bits (3633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 677/855 (79%), Positives = 758/855 (88%), Gaps = 13/855 (1%)
Query: 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
MEFLQGRALLNAIGNL LTG YAEALS+L LE+V QEPDAALGNGGLGRLASCFLDS
Sbjct: 157 MEFLQGRALLNAIGNLELTGPYAEALSQLSYKLEDVAHQEPDAALGNGGLGRLASCFLDS 216
Query: 61 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
+ATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLE+GNPWEI RNDVSYPV+FYGK+
Sbjct: 217 LATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGNPWEIVRNDVSYPVRFYGKV 276
Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
V GSDGK HW+GGEDIKAVA+D+PIPGYKT++TINLRLWST SE+FDL+AFN+G HT+
Sbjct: 277 VSGSDGKKHWVGGEDIKAVAHDVPIPGYKTRSTINLRLWSTKAASEEFDLNAFNSGRHTE 336
Query: 181 AAEALTNAEKVPICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWE 240
A+EAL NAEK ICYILYPGDES+EGK LRLKQQYTLCSASLQDIIARFE+RSGA+VNWE
Sbjct: 337 ASEALANAEK--ICYILYPGDESIEGKTLRLKQQYTLCSASLQDIIARFERRSGASVNWE 394
Query: 241 EFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKW 300
+FPEKVAVQMNDTHPTLCIPEL+RILID+KGLSWK+AWNITQRTVAYTNHTVLPEALEKW
Sbjct: 395 DFPEKVAVQMNDTHPTLCIPELMRILIDIKGLSWKDAWNITQRTVAYTNHTVLPEALEKW 454
Query: 301 SFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFAD 360
S +LM+KLLPRH+EIIEMIDEEL+ TI++EYGTAD DLL+K+LKE RILENV+LPA FAD
Sbjct: 455 SMDLMEKLLPRHVEIIEMIDEELIRTIIAEYGTADSDLLDKKLKEMRILENVELPAEFAD 514
Query: 361 LFVKTKESTDVVPDD---ELENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENC- 416
+ VKTKE+TD+ ++ E +EE + E +++ E D +DE+E
Sbjct: 515 ILVKTKEATDISSEEVQISKEGGEEEETSKEGGEEEEEKEVGGGREEGDDGKEDEVEKAI 574
Query: 417 DEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIV 476
E+ G V + +++ K E V PP+LVRMANLCVVG HAVNGVAEIHSEIV
Sbjct: 575 AEKDGTVKSSIGDKKK-------KLPEPVPVPPKLVRMANLCVVGGHAVNGVAEIHSEIV 627
Query: 477 TNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELR 536
++VFN FYKLWPEKFQNKTNGVTPRRWIRFCNPDLS I+T W+GTEDW+ NT KLAELR
Sbjct: 628 KDDVFNAFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSKIITQWIGTEDWILNTEKLAELR 687
Query: 537 KFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILG 596
KFADNEDLQ+Q+R AKRNNK+KV +F++E+TGYSVSPD+MFDIQVKRIHEYKRQL+NI G
Sbjct: 688 KFADNEDLQTQWREAKRNNKVKVAAFLRERTGYSVSPDSMFDIQVKRIHEYKRQLLNIFG 747
Query: 597 IVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 656
IVYRYKKMKEM+A ERK FVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD
Sbjct: 748 IVYRYKKMKEMNAAERKENFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 807
Query: 657 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVE 716
LLKVIFVPDYNVSVAE+LIPASELSQHISTAGMEASGTSNMKFAMNGC+ IGTLDGANVE
Sbjct: 808 LLKVIFVPDYNVSVAEMLIPASELSQHISTAGMEASGTSNMKFAMNGCLQIGTLDGANVE 867
Query: 717 IRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMG 776
IR+EVG +NFFLFGA+A EI GLRKER+ GKFVPD RFEEVKKFV+SGVFGSYNYDEL+G
Sbjct: 868 IREEVGADNFFLFGAKAREIVGLRKERARGKFVPDPRFEEVKKFVRSGVFGSYNYDELIG 927
Query: 777 SLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTI 836
SLEGNEGFG+ADYFLVG+DFPSYLECQE+VD+AY DQK+WTRMSI+NTAGSSKFSSDRTI
Sbjct: 928 SLEGNEGFGRADYFLVGQDFPSYLECQEEVDKAYRDQKKWTRMSILNTAGSSKFSSDRTI 987
Query: 837 QEYARDIWNIIPVEL 851
EYAR+IWNI PV+L
Sbjct: 988 HEYAREIWNIEPVKL 1002
|
The L isoform exhibits higher affinity for unbranched substrates such as glucan-like amylose and maltodextrin. Vicia faba (taxid: 3906) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1 |
| >sp|P27598|PHSL_IPOBA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P04045|PHSL1_SOLTU Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|Q9LIB2|PHS1_ARATH Alpha-glucan phosphorylase 1 OS=Arabidopsis thaliana GN=PHS1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P53535|PHSL2_SOLTU Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9SD76|PHS2_ARATH Alpha-glucan phosphorylase 2, cytosolic OS=Arabidopsis thaliana GN=PHS2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P53537|PHSH_VICFA Alpha-glucan phosphorylase, H isozyme OS=Vicia faba PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P32811|PHSH_SOLTU Alpha-glucan phosphorylase, H isozyme OS=Solanum tuberosum PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q00766|PHS1_DICDI Glycogen phosphorylase 1 OS=Dictyostelium discoideum GN=glpV PE=1 SV=3 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 852 | ||||||
| 255570250 | 977 | glycogen phosphorylase, putative [Ricinu | 0.970 | 0.846 | 0.806 | 0.0 | |
| 224077696 | 949 | predicted protein [Populus trichocarpa] | 0.983 | 0.883 | 0.802 | 0.0 | |
| 211906528 | 935 | alpha-1,4 glucan phosphorylase [Gossypiu | 0.980 | 0.893 | 0.801 | 0.0 | |
| 356551144 | 978 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.964 | 0.840 | 0.808 | 0.0 | |
| 2506470 | 1003 | RecName: Full=Alpha-1,4 glucan phosphory | 0.988 | 0.839 | 0.791 | 0.0 | |
| 130172 | 955 | RecName: Full=Alpha-1,4 glucan phosphory | 0.967 | 0.862 | 0.795 | 0.0 | |
| 359489019 | 982 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.974 | 0.845 | 0.807 | 0.0 | |
| 356573281 | 922 | PREDICTED: alpha-1,4 glucan phosphorylas | 0.965 | 0.892 | 0.807 | 0.0 | |
| 228312 | 955 | starch phosphorylase | 0.967 | 0.862 | 0.793 | 0.0 | |
| 130173 | 966 | RecName: Full=Alpha-1,4 glucan phosphory | 0.969 | 0.855 | 0.782 | 0.0 |
| >gi|255570250|ref|XP_002526085.1| glycogen phosphorylase, putative [Ricinus communis] gi|223534582|gb|EEF36279.1| glycogen phosphorylase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1431 bits (3705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/854 (80%), Positives = 755/854 (88%), Gaps = 27/854 (3%)
Query: 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
MEFLQGRALLNA+GNL LTGAYAEAL+KLG +LENV QEPDAALGNGGLGRLASCFLDS
Sbjct: 149 MEFLQGRALLNAVGNLELTGAYAEALTKLGHNLENVARQEPDAALGNGGLGRLASCFLDS 208
Query: 61 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
+ATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLE+GNPWEI RNDV+YPVKFYGK+
Sbjct: 209 LATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEMGNPWEIVRNDVAYPVKFYGKV 268
Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
V GSDG+ HWIGGEDIKAVAYD+PIPGYKTK+TINLRLWST P+ED DLSAFN+GDHTK
Sbjct: 269 VSGSDGRKHWIGGEDIKAVAYDVPIPGYKTKSTINLRLWSTKAPAEDLDLSAFNSGDHTK 328
Query: 181 AAEALTNAEKVPICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWE 240
A E L NAEK IC+ILYPGD+SVEGK+LRLKQQYTLCSASLQDII RFE+RSG++V WE
Sbjct: 329 AYETLANAEK--ICHILYPGDDSVEGKILRLKQQYTLCSASLQDIIVRFERRSGSHVKWE 386
Query: 241 EFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKW 300
EFPEKVAVQMNDTHPTLCIPEL+RIL+DLKGLSWKEAWNITQRTVAYTNHTVLPEALEKW
Sbjct: 387 EFPEKVAVQMNDTHPTLCIPELMRILMDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKW 446
Query: 301 SFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFAD 360
S +LMQKLLPRH+EIIEMIDEEL+ TIVSEYG D DLL K+LKE RILENVDLP FAD
Sbjct: 447 SLDLMQKLLPRHVEIIEMIDEELIRTIVSEYGREDLDLLNKKLKEMRILENVDLPDAFAD 506
Query: 361 LFVKTKESTDVVPDDELENCDEEGGPVDE--ELESAQEDGVLEEESTDVVPDDELENCDE 418
L +KTKES+ E E+ D+E V+E ELES +E E + DELEN +
Sbjct: 507 LIIKTKESSAASTTKEPEDADDEIKLVNEKDELESKEES----ENKDEAERKDELENKNT 562
Query: 419 EGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTN 478
+ +KE V+ PP++VRMANLCVVG HAVNGVAEIHSEIV +
Sbjct: 563 Q-------------------KKEKAVVEPPPKMVRMANLCVVGGHAVNGVAEIHSEIVKD 603
Query: 479 EVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKF 538
EVFN FY+LWP+KFQNKTNGVTPRRWIRFCNPDLS I+T W G+EDWV NT KLAELRKF
Sbjct: 604 EVFNVFYQLWPKKFQNKTNGVTPRRWIRFCNPDLSKIITDWTGSEDWVLNTEKLAELRKF 663
Query: 539 ADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIV 598
+DNEDLQ+Q+RAAKR+NKMKVV IKEKTGYSVS DAMFDIQVKRIHEYKRQL+NILGIV
Sbjct: 664 SDNEDLQTQWRAAKRSNKMKVVQLIKEKTGYSVSTDAMFDIQVKRIHEYKRQLLNILGIV 723
Query: 599 YRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL 658
YRYKKMKEMSA ERK ++VPRVCIFGGKAFATY+QAKRIVKFITDVGATVNHDPEIGDLL
Sbjct: 724 YRYKKMKEMSAAERKKEYVPRVCIFGGKAFATYLQAKRIVKFITDVGATVNHDPEIGDLL 783
Query: 659 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 718
KV+FVP+YNVSVAELLIPASELSQHISTAGMEASGTSNMKF+MNGC+LIGTLDGANVEIR
Sbjct: 784 KVVFVPNYNVSVAELLIPASELSQHISTAGMEASGTSNMKFSMNGCVLIGTLDGANVEIR 843
Query: 719 QEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSL 778
+EVGE+NFFLFGA+AHEIAGLRKER+EGKFVPD RFEEVK+FV+SGVFG+Y+YDEL+GSL
Sbjct: 844 KEVGEDNFFLFGAKAHEIAGLRKERAEGKFVPDPRFEEVKEFVRSGVFGTYDYDELLGSL 903
Query: 779 EGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQE 838
EGNEGFG+ DYFLVGKDFPSYLECQEKVD+AY DQKRWT+MSIMNTAGS FSSDRTI E
Sbjct: 904 EGNEGFGRGDYFLVGKDFPSYLECQEKVDKAYRDQKRWTKMSIMNTAGSYYFSSDRTIHE 963
Query: 839 YARDIWNIIPVELP 852
YARDIWNI PV LP
Sbjct: 964 YARDIWNIEPVILP 977
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224077696|ref|XP_002305367.1| predicted protein [Populus trichocarpa] gi|222848331|gb|EEE85878.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|211906528|gb|ACJ11757.1| alpha-1,4 glucan phosphorylase [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
| >gi|356551144|ref|XP_003543938.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|2506470|sp|P53536.2|PHSL_VICFA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor gi|1616637|emb|CAA85354.1| alpha-1,4 glucan phosphorylase, L isoform precursor [Vicia faba var. minor] | Back alignment and taxonomy information |
|---|
| >gi|130172|sp|P27598.1|PHSL_IPOBA RecName: Full=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L; Flags: Precursor gi|168276|gb|AAA63271.1| starch phosphorylase [Ipomoea batatas] | Back alignment and taxonomy information |
|---|
| >gi|359489019|ref|XP_002279075.2| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Vitis vinifera] gi|296082990|emb|CBI22291.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356573281|ref|XP_003554791.1| PREDICTED: alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|228312|prf||1802404A starch phosphorylase | Back alignment and taxonomy information |
|---|
| >gi|130173|sp|P04045.2|PHSL1_SOLTU RecName: Full=Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic; AltName: Full=Starch phosphorylase L-1; Flags: Precursor gi|217999|dbj|BAA00407.1| alpha-glucan phosphorylase precursor [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 852 | ||||||
| UNIPROTKB|P04045 | 966 | P04045 "Alpha-1,4 glucan phosp | 0.469 | 0.414 | 0.865 | 0.0 | |
| UNIPROTKB|P53535 | 974 | STP-1 "Alpha-1,4 glucan phosph | 0.471 | 0.412 | 0.840 | 0.0 | |
| TAIR|locus:2093787 | 962 | PHS1 "alpha-glucan phosphoryla | 0.471 | 0.417 | 0.858 | 0.0 | |
| TAIR|locus:2075576 | 841 | PHS2 "alpha-glucan phosphoryla | 0.470 | 0.476 | 0.669 | 4.2e-261 | |
| DICTYBASE|DDB_G0281383 | 853 | glpV "glycogen phosphorylase b | 0.461 | 0.460 | 0.503 | 3.3e-195 | |
| ASPGD|ASPL0000059322 | 879 | AN1015 [Emericella nidulans (t | 0.461 | 0.447 | 0.501 | 2.4e-192 | |
| DICTYBASE|DDB_G0291123 | 993 | glpD "glycogen phosphorylase a | 0.450 | 0.386 | 0.489 | 1.2e-190 | |
| UNIPROTKB|G4MW66 | 888 | MGG_01819 "Phosphorylase" [Mag | 0.463 | 0.444 | 0.485 | 6.4e-190 | |
| CGD|CAL0001970 | 900 | GPH1 [Candida albicans (taxid: | 0.460 | 0.435 | 0.474 | 4.4e-180 | |
| UNIPROTKB|Q5AFP7 | 900 | GPH1 "Phosphorylase" [Candida | 0.460 | 0.435 | 0.474 | 4.4e-180 |
| UNIPROTKB|P04045 P04045 "Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] | Back alignment and assigned GO terms |
|---|
Score = 1851 (656.6 bits), Expect = 0., Sum P(2) = 0.
Identities = 346/400 (86%), Positives = 376/400 (94%)
Query: 452 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 511
VRMANLCVVG HAVNGVAEIHSEIV EVFN+FY+LWPEKFQNKTNGVTPRRWIRFCNP
Sbjct: 566 VRMANLCVVGGHAVNGVAEIHSEIVKEEVFNDFYELWPEKFQNKTNGVTPRRWIRFCNPP 625
Query: 512 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 571
LS+I+T W GTEDWV T KLAEL+KFADNEDLQ+++R AKR+NK+KVVSF+KEKTGYSV
Sbjct: 626 LSAIITKWTGTEDWVLKTEKLAELQKFADNEDLQNEWREAKRSNKIKVVSFLKEKTGYSV 685
Query: 572 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 631
PDAMFDIQVKRIHEYKRQL+NI GIVYRYKKMKEM+A ERK FVPRVCIFGGKAFATY
Sbjct: 686 VPDAMFDIQVKRIHEYKRQLLNIFGIVYRYKKMKEMTAAERKTNFVPRVCIFGGKAFATY 745
Query: 632 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 691
VQAKRIVKFITDVGAT+NHDPEIGDLLKV+FVPDYNVSVAELLIPAS+LS+HISTAGMEA
Sbjct: 746 VQAKRIVKFITDVGATINHDPEIGDLLKVVFVPDYNVSVAELLIPASDLSEHISTAGMEA 805
Query: 692 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPD 751
SGTSNMKFAMNGCI IGTLDGANVEIR+EVGEENFFLFGA+AHEIAGLRKER++GKFVPD
Sbjct: 806 SGTSNMKFAMNGCIQIGTLDGANVEIREEVGEENFFLFGAQAHEIAGLRKERADGKFVPD 865
Query: 752 ARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYC 811
RFEEVK+FV+SG FGSYNYD+L+GSLEGNEGFG+ADYFLVGKDFPSY+ECQEKVDEAY
Sbjct: 866 ERFEEVKEFVRSGAFGSYNYDDLIGSLEGNEGFGRADYFLVGKDFPSYIECQEKVDEAYR 925
Query: 812 DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 851
DQKRWT MSI+NTAGS KFSSDRTI EYA+DIWNI VE+
Sbjct: 926 DQKRWTTMSILNTAGSYKFSSDRTIHEYAKDIWNIEAVEI 965
|
|
| UNIPROTKB|P53535 STP-1 "Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2093787 PHS1 "alpha-glucan phosphorylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2075576 PHS2 "alpha-glucan phosphorylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0281383 glpV "glycogen phosphorylase b" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000059322 AN1015 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0291123 glpD "glycogen phosphorylase a" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MW66 MGG_01819 "Phosphorylase" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0001970 GPH1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5AFP7 GPH1 "Phosphorylase" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P27598 | PHSL_IPOBA | 2, ., 4, ., 1, ., 1 | 0.7957 | 0.9671 | 0.8628 | N/A | no |
| Q9LIB2 | PHS1_ARATH | 2, ., 4, ., 1, ., 1 | 0.7769 | 0.9471 | 0.8388 | yes | no |
| P53535 | PHSL2_SOLTU | 2, ., 4, ., 1, ., 1 | 0.7511 | 0.9776 | 0.8552 | N/A | no |
| P53536 | PHSL_VICFA | 2, ., 4, ., 1, ., 1 | 0.7918 | 0.9882 | 0.8394 | N/A | no |
| P04045 | PHSL1_SOLTU | 2, ., 4, ., 1, ., 1 | 0.7828 | 0.9694 | 0.8550 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 2.4.1 | 0.976 |
| 4th Layer | 2.4.1.1 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | estExt_Genewise1_v1.C_LG_IV0101 | hypothetical protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity) (950 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
 | eugene3.00280310 | • | • | • | • | • | 0.970 | ||||
 | fgenesh4_pg.C_LG_V001651 | • | • | • | • | 0.954 | |||||
 | gw1.XV.361.1 | • | • | • | • | 0.951 | |||||
 | gw1.164.92.1 | • | • | • | • | 0.943 | |||||
 | fgenesh4_pm.C_LG_XIV000240 | • | • | • | • | 0.935 | |||||
 | gw1.XVII.1126.1 | • | • | • | • | 0.934 | |||||
 | gw1.V.1420.1 | • | • | • | • | 0.933 | |||||
 | gw1.170.63.1 | • | • | • | • | 0.929 | |||||
 | gw1.VII.320.1 | • | • | • | • | 0.928 | |||||
 | estExt_fgenesh4_pm.C_LG_II0158 | • | • | • | • | 0.928 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 852 | |||
| cd04300 | 797 | cd04300, GT1_Glycogen_Phosphorylase, This is a fam | 0.0 | |
| cd04300 | 797 | cd04300, GT1_Glycogen_Phosphorylase, This is a fam | 0.0 | |
| pfam00343 | 712 | pfam00343, Phosphorylase, Carbohydrate phosphoryla | 0.0 | |
| TIGR02093 | 794 | TIGR02093, P_ylase, glycogen/starch/alpha-glucan p | 0.0 | |
| TIGR02093 | 794 | TIGR02093, P_ylase, glycogen/starch/alpha-glucan p | 1e-163 | |
| pfam00343 | 712 | pfam00343, Phosphorylase, Carbohydrate phosphoryla | 1e-152 | |
| PRK14985 | 798 | PRK14985, PRK14985, maltodextrin phosphorylase; Pr | 1e-143 | |
| COG0058 | 750 | COG0058, GlgP, Glucan phosphorylase [Carbohydrate | 1e-141 | |
| PRK14986 | 815 | PRK14986, PRK14986, glycogen phosphorylase; Provis | 1e-137 | |
| PRK14985 | 798 | PRK14985, PRK14985, maltodextrin phosphorylase; Pr | 1e-101 | |
| PRK14986 | 815 | PRK14986, PRK14986, glycogen phosphorylase; Provis | 1e-100 | |
| COG0058 | 750 | COG0058, GlgP, Glucan phosphorylase [Carbohydrate | 1e-99 | |
| TIGR02094 | 601 | TIGR02094, more_P_ylases, alpha-glucan phosphoryla | 3e-18 | |
| TIGR02094 | 601 | TIGR02094, more_P_ylases, alpha-glucan phosphoryla | 7e-13 | |
| cd04299 | 778 | cd04299, GT1_Glycogen_Phosphorylase_like, This fam | 9e-12 | |
| cd04299 | 778 | cd04299, GT1_Glycogen_Phosphorylase_like, This fam | 3e-08 | |
| COG5271 | 4600 | COG5271, MDN1, AAA ATPase containing von Willebran | 0.002 |
| >gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Score = 655 bits (1692), Expect = 0.0
Identities = 210/409 (51%), Positives = 273/409 (66%), Gaps = 23/409 (5%)
Query: 447 EPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIR 506
+ VRMA+L +VGSH+VNGVA +HSE++ VF +FY+L+PEKF NKTNG+TPRRW+
Sbjct: 403 GGEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLL 462
Query: 507 FCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEK 566
NP LS+++T +G +DWVT+ +L +L FAD+ +FRA K+ NK ++ ++IK+
Sbjct: 463 QANPGLSALITETIG-DDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKT 521
Query: 567 TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK 626
TG V PD++FD+QVKRIHEYKRQL+N+L I++ Y ++KE A VPR IFGGK
Sbjct: 522 TGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENP----NADIVPRTFIFGGK 577
Query: 627 AFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 686
A Y AK I+K I V VN+DP++GD LKV+F+P+YNVS+AE +IPA++LS+ IST
Sbjct: 578 AAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQIST 637
Query: 687 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG 746
AG EASGT NMKF +NG + IGTLDGANVEI +EVGEEN F+FG A E+ LR
Sbjct: 638 AGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANGYYP 697
Query: 747 KFV--PDARFEEVKKFVKSGVFGSYN-------YDELMGSLEGNEGFGQADYFLVGKDFP 797
D V + SG F + D L L GN D +LV DF
Sbjct: 698 ADYYEADPELRRVLDQIASGFFSPGDPGEFRPLVDSL---LNGN------DEYLVLADFE 748
Query: 798 SYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 846
SY++ QEKVD Y DQ+ W R SI+N A S KFSSDRTI+EYA DIWN+
Sbjct: 749 SYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAEDIWNV 797
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 797 |
| >gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase | Back alignment and domain information |
|---|
| >gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >gnl|CDD|227596 COG5271, MDN1, AAA ATPase containing von Willebrand factor type A (vWA) domain [General function prediction only] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 852 | |||
| KOG2099 | 843 | consensus Glycogen phosphorylase [Carbohydrate tra | 100.0 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 100.0 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 100.0 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 100.0 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 100.0 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 100.0 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 100.0 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 100.0 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 99.81 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 99.75 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 99.63 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 99.6 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 99.41 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 99.32 | |
| PLN02316 | 1036 | synthase/transferase | 98.69 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 97.81 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 97.15 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 97.11 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 97.07 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 97.06 | |
| PLN00142 | 815 | sucrose synthase | 97.06 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 97.05 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 97.01 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 96.92 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 96.89 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 96.81 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 96.79 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 96.69 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 96.65 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 96.51 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 96.47 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 96.45 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 96.4 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 96.35 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 96.34 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 96.31 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 96.27 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 96.21 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 96.15 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 96.01 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 95.82 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 95.76 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 95.7 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 95.68 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 95.55 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 95.4 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 95.33 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 95.29 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 94.95 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 94.94 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 94.89 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 94.57 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 94.49 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 94.05 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 93.95 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 93.87 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 93.59 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 93.48 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 93.32 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 93.2 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 93.0 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 92.81 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 92.15 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 90.96 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 90.16 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 89.81 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 89.26 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 87.59 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 87.27 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 86.55 |
| >KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-267 Score=2163.22 Aligned_cols=738 Identities=56% Similarity=0.967 Sum_probs=716.6
Q ss_pred CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCchhchhhhHhhhhccCCCeEEEeecCCCcce
Q 003055 1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF 80 (852)
Q Consensus 1 ~Efl~Gr~l~n~l~nlgl~~~~~eal~~lg~~le~~~~~E~da~LgnGGLGrLAacfldS~a~L~~P~~GyGlrY~yG~F 80 (852)
|||+|||+|+|+++||||.+.+.+||.+||+++|++.++|+|||||||||||||+||||||||||+|+|||||||+||+|
T Consensus 88 lEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGiF 167 (843)
T KOG2099|consen 88 LEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGIF 167 (843)
T ss_pred hHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhhH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCceeeecccccccCCCcccccCCceeeeecCCeeeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 003055 81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS 160 (852)
Q Consensus 81 ~Q~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~yd~pi~Gy~~~~~~~LRLW~ 160 (852)
+|+|.+|||+|.||+||+.|||||+.|+++++||+|||+|+...+| .+|++++.|.|+|||+|||||+|++||+||||+
T Consensus 168 ~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLWs 246 (843)
T KOG2099|consen 168 KQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLWS 246 (843)
T ss_pred HHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeeec
Confidence 9999999999999999999999999999999999999999988878 579999999999999999999999999999999
Q ss_pred ecCCCCcccccccCCCchhHHHHHhccccccCccccccCCCCCcccchhhhhhhhhhhhchHHHHHHHHHHhcCc-----
Q 003055 161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKVPICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGA----- 235 (852)
Q Consensus 161 a~v~~~~fdl~~fn~g~y~~a~~~~~~~e~r~It~~LYp~D~~~~GkelRLkQeyfl~saslqdiirrf~~~~gG----- 235 (852)
|+ ++++|||..||.|||++|+.+++.+|+ ||.||||||+..+||+||||||||+|+||||||||||+++.+|
T Consensus 247 ak-a~~df~l~~fN~Gdy~~av~~~~~Aen--I~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~ 323 (843)
T KOG2099|consen 247 AK-APNDFDLKDFNVGDYIQAVLDRNLAEN--ISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPV 323 (843)
T ss_pred cC-CCCCCCHHhccCchHHHHHHHHHhhhh--ceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCccccc
Confidence 99 777999999999999999999999999 9999999999999999999999999999999999999988776
Q ss_pred ccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHhccceeecccCCCCcccccCCHHHHHHhchhHHHH
Q 003055 236 NVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEI 315 (852)
Q Consensus 236 ~~~l~~l~~~~~ihlNDtHpalai~ELmR~Lid~~gl~w~eAw~i~~~~~~fTnHT~vpealEkw~~~l~~~lLprh~~I 315 (852)
..+|++||++++||||||||+||||||||+|||.+||+|++||+||++||+|||||+||||||+||++||++||||||||
T Consensus 324 ~~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleI 403 (843)
T KOG2099|consen 324 RTNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEI 403 (843)
T ss_pred ccchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHH
Confidence 34599999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccCCCCCChhhhhhhh
Q 003055 316 IEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQ 395 (852)
Q Consensus 316 I~~In~~f~~~i~~~~~~~~~~~~~~~~~~l~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (852)
||+||.+|+..+.++||+ |.+++++||||+
T Consensus 404 Iy~In~~~l~~i~~~fp~-----D~drlrrmsiie--------------------------------------------- 433 (843)
T KOG2099|consen 404 IYEINQRFLQTVAAKFPG-----DVDRLRRMSIIE--------------------------------------------- 433 (843)
T ss_pred HHHHHHHHHHHHHHHCCC-----cHHHHhhhhhhh---------------------------------------------
Confidence 999999999999999998 999999999988
Q ss_pred cccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccCcchhHHHHHHHHH
Q 003055 396 EDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEI 475 (852)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S~~vNGVS~lHsei 475 (852)
|. ++++++|||+||++|||+|||||+|||+|
T Consensus 434 -----------------------------------------------e~--~~~k~i~MA~L~ivgsHaVNGVa~iHSei 464 (843)
T KOG2099|consen 434 -----------------------------------------------EN--SPEKRINMAHLCIVGSHAVNGVAEIHSEI 464 (843)
T ss_pred -----------------------------------------------cC--CccceeeeeeeeeecccccccHHHHHHHH
Confidence 21 24579999999999999999999999999
Q ss_pred HhHhhhhhhhhhcCCCcccccccccccccccccChhHHHHHHhhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHH
Q 003055 476 VTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNN 555 (852)
Q Consensus 476 ~k~~~f~~f~~l~P~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~ig~~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~n 555 (852)
+|+.+|+||+++||+||+|||||||||||+.+|||.|++||+++||+ +|++|+++|.+|+++++|++|++.|+++|++|
T Consensus 465 lK~~~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ige-~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~N 543 (843)
T KOG2099|consen 465 LKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIGE-EWITDLDQLTKLRKFADDEEFQREWAKVKQEN 543 (843)
T ss_pred HHHHHHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhhh-HhhhhHHHHHHHHHhcccHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999995 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCcCCCCcccccccccccccccccchhhhHHHHHHHHHhcChhhhhcccCCeEEEEeccCCCCcHHHH
Q 003055 556 KMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAK 635 (852)
Q Consensus 556 K~~L~~~I~~~~g~~ldpdslfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK 635 (852)
|.+|++||++.+|+.++|+||||+|||||||||||+|||||+|+||++||+ +|. ..++||++||||||+|+|++||
T Consensus 544 Klk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~---k~fvprtvm~GGKaapgY~mAK 619 (843)
T KOG2099|consen 544 KLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPA---KAFVPRTVMIGGKAAPGYHMAK 619 (843)
T ss_pred HHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhh---hccCceEEEEcCccCchhHHHH
Confidence 999999999999999999999999999999999999999999999999997 554 4489999999999999999999
Q ss_pred HHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccc
Q 003055 636 RIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 715 (852)
Q Consensus 636 ~iIk~I~~va~~vn~Dp~v~~~lKVvFlenY~vslAe~lipa~Dvs~nis~ag~EASGTsnMKfamNG~l~lgtlDGanv 715 (852)
.|||||++||++|||||.|+++|||||||||+||+||+||||+|+|+||||||+||||||||||||||||+|||||||||
T Consensus 620 ~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANV 699 (843)
T KOG2099|consen 620 LIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANV 699 (843)
T ss_pred HHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccceEecccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhcCCCCccc---HHHHHHHhccCCCCCCCccc
Q 003055 716 EIRQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYF 790 (852)
Q Consensus 716 Ei~e~vg~eN~f~FG~~~~ev~~l~~~~--~~~~~~~~~~~~~v~d~i~~g~f~~~~---~~~l~~~L~~~~~~~~~D~y 790 (852)
||+||+|+||+||||+++++|..||+++ ..+.|.++|++++|+++|.+|.|++++ |+++.+.|.++ |+|
T Consensus 700 Em~eE~GeeN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~h------D~f 773 (843)
T KOG2099|consen 700 EMAEEAGEENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMYH------DYF 773 (843)
T ss_pred HHHHHcCcccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhcc------ceE
Confidence 9999999999999999999999999985 444578999999999999999999876 88888888874 999
Q ss_pred ccccchhHHHHHHHHHHHHhcCHhHHHHHHHHhhhcCCCCChhHHHHHHHHHHhcccccCCC
Q 003055 791 LVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 852 (852)
Q Consensus 791 ~vlaDF~sY~~aQ~~v~~~Y~d~~~W~~~~i~niA~sg~FSSDRtI~eYa~~iw~i~p~~~p 852 (852)
+|++||+||++||++|+++|.||++|++|+|+|||+||+|||||||.|||++||+|+|++.|
T Consensus 774 ~V~~Df~sYi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~~ 835 (843)
T KOG2099|consen 774 LVFADFEAYIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSELP 835 (843)
T ss_pred EeeCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999998865
|
|
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 852 | ||||
| 1l5v_A | 796 | Crystal Structure Of The Maltodextrin Phosphorylase | 1e-102 | ||
| 1qm5_A | 796 | Phosphorylase Recognition And Phosphorylysis Of Its | 1e-102 | ||
| 1z8d_A | 842 | Crystal Structure Of Human Muscle Glycogen Phosphor | 1e-101 | ||
| 2qll_A | 847 | Human Liver Glycogen Phosphorylase- Gl Complex Leng | 1e-101 | ||
| 1em6_A | 847 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1xoi_A | 846 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1fa9_A | 846 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 2zb2_A | 849 | Human Liver Glycogen Phosphorylase A Complexed With | 1e-101 | ||
| 1fc0_A | 846 | Human Liver Glycogen Phosphorylase Complexed With N | 1e-101 | ||
| 3dds_A | 848 | Crystal Structure Of Glycogen Phosphorylase Complex | 1e-101 | ||
| 3ceh_A | 809 | Human Liver Glycogen Phosphorylase (Tense State) In | 1e-101 | ||
| 2ecp_A | 796 | The Crystal Structure Of The E. Coli Maltodextrin P | 1e-100 | ||
| 1ahp_A | 797 | Oligosaccharide Substrate Binding In Escherichia Co | 1e-100 | ||
| 1c8l_A | 842 | Synergistic Inhibition Of Glycogen Phosphorylase A | 1e-100 | ||
| 1pyg_A | 842 | Structural Basis For The Activation Of Glycogen Pho | 1e-100 | ||
| 1abb_A | 828 | Control Of Phosphorylase B Conformation By A Modifi | 1e-100 | ||
| 2gj4_A | 824 | Structure Of Rabbit Muscle Glycogen Phosphorylase I | 1e-100 | ||
| 2gm9_A | 825 | Structure Of Rabbit Muscle Glycogen Phosphorylase I | 1e-100 | ||
| 2ffr_A | 825 | Crystallographic Studies On N-Azido-Beta-D-Glucopyr | 1e-100 | ||
| 1c50_A | 830 | Identification And Structural Characterization Of A | 1e-100 | ||
| 7gpb_A | 842 | Structural Mechanism For Glycogen Phosphorylase Con | 1e-100 | ||
| 1gpa_A | 842 | Structural Mechanism For Glycogen Phosphorylase Con | 1e-100 | ||
| 2g9q_A | 842 | The Crystal Structure Of The Glycogen Phosphorylase | 1e-100 | ||
| 1noi_A | 842 | Complex Of Glycogen Phosphorylase With A Transition | 1e-100 | ||
| 2pyd_A | 843 | The Crystal Structure Of Glycogen Phosphorylase In | 1e-100 | ||
| 3nc4_A | 841 | The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbaz | 1e-100 | ||
| 4ej2_A | 825 | Crystal Structure Of Gpb In Complex With Dk10 Lengt | 1e-100 | ||
| 1z6p_A | 842 | Glycogen Phosphorylase Amp Site Inhibitor Complex L | 1e-100 | ||
| 1ygp_B | 879 | Phosphorylated Form Of Yeast Glycogen Phosphorylase | 6e-97 | ||
| 2c4m_A | 796 | Starch Phosphorylase: Structural Studies Explain Ox | 2e-95 |
| >pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase Complexed With Glucose-1-Phosphate Length = 796 | Back alignment and structure |
|
| >pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its Oligosaccharide Substrate: Answers To A Long Outstanding Question Length = 796 | Back alignment and structure |
| >pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose Length = 842 | Back alignment and structure |
| >pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex Length = 847 | Back alignment and structure |
| >pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac And Cp-526, 423 Length = 847 | Back alignment and structure |
| >pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide Length = 846 | Back alignment and structure |
| >pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp Length = 846 | Back alignment and structure |
| >pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose And 5- Chloro-N-[4-(1, 2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide Length = 849 | Back alignment and structure |
| >pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With N-Acetyl-Beta-D- Glucopyranosylamine Length = 846 | Back alignment and structure |
| >pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With An Anthranilimide Based Inhibitor Gsk261 Length = 848 | Back alignment and structure |
| >pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In Complex With The Allosteric Inhibitor Ave5688 Length = 809 | Back alignment and structure |
| >pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin Phosphorylase Complex Length = 796 | Back alignment and structure |
| >pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli Maltodextrin Phsphorylase Length = 797 | Back alignment and structure |
| >pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A Potential Antidiabetic Drug And Caffeine Length = 842 | Back alignment and structure |
| >pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen Phosphorylase B By Adenosine Monophosphate Length = 842 | Back alignment and structure |
| >pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate Length = 828 | Back alignment and structure |
| >pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand Length = 824 | Back alignment and structure |
| >pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Thienopyrrole Length = 825 | Back alignment and structure |
| >pdb|2FFR|A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylamine Length = 825 | Back alignment and structure |
| >pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B Length = 830 | Back alignment and structure |
| >pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 | Back alignment and structure |
| >pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 | Back alignment and structure |
| >pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab Complex Length = 842 | Back alignment and structure |
| >pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State Analogue Nojirimycin Tetrazole And Phosphate In The T And R States Length = 842 | Back alignment and structure |
| >pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex With Glucose At 100 K Length = 843 | Back alignment and structure |
| >pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibitors Length = 841 | Back alignment and structure |
| >pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10 Length = 825 | Back alignment and structure |
| >pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex Length = 842 | Back alignment and structure |
| >pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. Length = 796 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 | Back alignment and structure |
|---|
Score = 675 bits (1745), Expect = 0.0
Identities = 177/403 (43%), Positives = 252/403 (62%), Gaps = 9/403 (2%)
Query: 452 VRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPD 511
V MA + ++++NGVA +H+EI+ E ++Y LWPEKF NKTNGVTPRRW+R NP
Sbjct: 393 VHMAWIACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPG 452
Query: 512 LSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSV 571
LS +LT G++DWVT+ +L +LR +AD++ + + RA K NK +I E+ G +
Sbjct: 453 LSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEWILERQGIEI 512
Query: 572 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY 631
P+++FD+Q+KR+HEYKRQLMN L ++ Y ++KE + R IFG KA Y
Sbjct: 513 DPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKE----DGLTDIPARTVIFGAKAAPGY 568
Query: 632 VQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEA 691
V+AK I+K I + VN+DPE+ LLKV+FV +YNVS AE ++PAS++S+ ISTAG EA
Sbjct: 569 VRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEA 628
Query: 692 SGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE-RSEGKFVP 750
SGTSNMKF MNG + +GT+DGANVEI VGEEN ++FGAR E+ LR+ + +
Sbjct: 629 SGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRESYKPYELYET 688
Query: 751 DARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVD 807
+ + +G N + +L SL G +D + V DF Y E ++++
Sbjct: 689 VPGLKRALDALDNGTLNDNNSGLFYDLKHSLIHGYGKDASDTYYVLGDFADYRETRDRMA 748
Query: 808 EAYC-DQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV 849
Y D W RM+ +N S +FSSDRTI++YA +IW + P
Sbjct: 749 ADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPT 791
|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 | Back alignment and structure |
|---|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 | Back alignment and structure |
|---|
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 852 | |||
| 1ygp_A | 879 | Yeast glycogen phosphorylase; phosphorylated form, | 100.0 | |
| 2gj4_A | 824 | Glycogen phosphorylase, muscle form; transferase; | 100.0 | |
| 1l5w_A | 796 | Maltodextrin phosphorylase; enzymatic catalysis, s | 100.0 | |
| 2c4m_A | 796 | Glycogen phosphorylase; allosteric control, phosph | 100.0 | |
| 3vue_A | 536 | GBSS-I, granule-bound starch synthase 1, chloropla | 99.37 | |
| 2qzs_A | 485 | Glycogen synthase; glycosyl-transferase, GT-B fold | 97.82 | |
| 1rzu_A | 485 | Glycogen synthase 1; glycosyl-transferase, GT-B fo | 97.75 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 97.67 | |
| 3fro_A | 439 | GLGA glycogen synthase; glycosyltransferase family | 97.13 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 97.06 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 96.97 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 96.81 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 96.77 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 96.58 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 96.54 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 96.43 | |
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 96.38 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 96.21 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 95.44 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 95.0 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 94.97 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 93.43 | |
| 2vsy_A | 568 | XCC0866; transferase, glycosyl transferase, GT-B, | 89.25 | |
| 1uqt_A | 482 | Alpha, alpha-trehalose-phosphate synthase; glycosy | 86.73 | |
| 3beo_A | 375 | UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a | 83.63 | |
| 1vgv_A | 384 | UDP-N-acetylglucosamine 2-epimerase; structural ge | 83.52 |
| >2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... | Back alignment and structure |
|---|
| >1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* | Back alignment and structure |
|---|
| >2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} | Back alignment and structure |
|---|
| >3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* | Back alignment and structure |
|---|
| >2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A | Back alignment and structure |
|---|
| >1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A | Back alignment and structure |
|---|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* | Back alignment and structure |
|---|
| >3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* | Back alignment and structure |
|---|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* | Back alignment and structure |
|---|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* | Back alignment and structure |
|---|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* | Back alignment and structure |
|---|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* | Back alignment and structure |
|---|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* | Back alignment and structure |
|---|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 | Back alignment and structure |
|---|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* | Back alignment and structure |
|---|
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* | Back alignment and structure |
|---|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 | Back alignment and structure |
|---|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* | Back alignment and structure |
|---|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* | Back alignment and structure |
|---|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* | Back alignment and structure |
|---|
| >2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* | Back alignment and structure |
|---|
| >1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* | Back alignment and structure |
|---|
| >3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A | Back alignment and structure |
|---|
| >1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 852 | ||||
| d2gj4a1 | 824 | c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit | 1e-151 | |
| d2gj4a1 | 824 | c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit | 1e-119 | |
| d1ygpa_ | 876 | c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas | 1e-148 | |
| d1ygpa_ | 876 | c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas | 1e-128 | |
| d1l5wa_ | 796 | c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E | 1e-143 | |
| d1l5wa_ | 796 | c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E | 1e-114 |
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 463 bits (1192), Expect = e-151
Identities = 181/433 (41%), Positives = 268/433 (61%), Gaps = 16/433 (3%)
Query: 425 EELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEF 484
+ + DV + + + + + MA+LC+ GSHAVNGVA IHSEI+ +F +F
Sbjct: 401 NRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDF 460
Query: 485 YKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDL 544
Y+L P KFQNKTNG+TPRRW+ CNP L+ I+ +G E+++++ +L +L + D+E
Sbjct: 461 YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIG-EEYISDLDQLRKLLSYVDDEAF 519
Query: 545 QSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKM 604
K+ NK+K ++++ + ++P+++FD+QVKRIHEYKRQL+N L ++ Y ++
Sbjct: 520 IRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRI 579
Query: 605 KEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVP 664
K+ VPR + GGKA Y AK I+K IT +G VNHDP +GD L+VIF+
Sbjct: 580 KKEPNK----FVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLE 635
Query: 665 DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 724
+Y VS+AE +IPA++LS+ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E GEE
Sbjct: 636 NYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEE 695
Query: 725 NFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFGSYNYD---ELMGSLE 779
NFF+FG R ++ L + ++ + ++ + + SG F D +++ L
Sbjct: 696 NFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLM 755
Query: 780 GNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEY 839
+ D F V D+ Y++CQE+V Y + + WTRM I N A S KFSSDRTI +Y
Sbjct: 756 HH------DRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQY 809
Query: 840 ARDIWNIIPVELP 852
AR+IW + P
Sbjct: 810 AREIWGVEPSRQR 822
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 852 | |||
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 100.0 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 100.0 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 98.97 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 96.86 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.66 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 96.41 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 94.79 |
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|