Citrus Sinensis ID: 003127
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 845 | 2.2.26 [Sep-21-2011] | |||||||
| Q37145 | 1020 | Calcium-transporting ATPa | yes | no | 0.998 | 0.827 | 0.836 | 0.0 | |
| O81108 | 1014 | Calcium-transporting ATPa | no | no | 0.996 | 0.830 | 0.818 | 0.0 | |
| O64806 | 1015 | Putative calcium-transpor | no | no | 0.996 | 0.829 | 0.813 | 0.0 | |
| Q2QMX9 | 1020 | Calcium-transporting ATPa | no | no | 0.998 | 0.827 | 0.797 | 0.0 | |
| Q6ATV4 | 1033 | Calcium-transporting ATPa | no | no | 0.996 | 0.815 | 0.740 | 0.0 | |
| O22218 | 1030 | Calcium-transporting ATPa | no | no | 0.992 | 0.814 | 0.668 | 0.0 | |
| Q9M2L4 | 1025 | Putative calcium-transpor | no | no | 0.990 | 0.816 | 0.664 | 0.0 | |
| Q2RAS0 | 1017 | Probable calcium-transpor | no | no | 1.0 | 0.830 | 0.660 | 0.0 | |
| Q2QY12 | 1039 | Probable calcium-transpor | no | no | 1.0 | 0.813 | 0.661 | 0.0 | |
| Q65X71 | 1021 | Probable calcium-transpor | no | no | 0.995 | 0.823 | 0.629 | 0.0 |
| >sp|Q37145|ACA1_ARATH Calcium-transporting ATPase 1, chloroplastic OS=Arabidopsis thaliana GN=ACA1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 1433 bits (3709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/844 (83%), Positives = 769/844 (91%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TLMILA CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD E
Sbjct: 175 TLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAE 234
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
KKKI VQV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESE
Sbjct: 235 KKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESE 294
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PV+V+ +PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA
Sbjct: 295 PVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241
TIIGKIGLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPE
Sbjct: 355 TIIGKIGLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPE 414
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC
Sbjct: 415 GLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACIC 474
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
E+ KEV+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LE
Sbjct: 475 EQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLE 534
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
FGL LGGDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK+
Sbjct: 535 FGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKY 594
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
+N +GEVVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGI
Sbjct: 595 INKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGI 654
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFRE
Sbjct: 655 VGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFRE 714
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
KSDEEL KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLA
Sbjct: 715 KSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLA 774
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGI+GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF S
Sbjct: 775 MGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLS 834
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNIL
Sbjct: 835 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNIL 894
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQSLYQ +IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQVFNEISSREMEKI+VF
Sbjct: 895 GQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVF 954
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
KGILKNYVFVAVLTCTV+FQ+IIIELLGTFA+TTPLNL QW VSI+LGFLGMP+AA LK+
Sbjct: 955 KGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKM 1014
Query: 842 IQVG 845
I VG
Sbjct: 1015 IPVG 1018
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O81108|ACA2_ARATH Calcium-transporting ATPase 2, plasma membrane-type OS=Arabidopsis thaliana GN=ACA2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1400 bits (3623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 692/845 (81%), Positives = 765/845 (90%), Gaps = 3/845 (0%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTLMIL VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+
Sbjct: 172 MTLMILGVCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDK 231
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKITVQV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGES
Sbjct: 232 EKKKITVQVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGES 291
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPV VNA NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGV
Sbjct: 292 EPVMVNAQNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGV 351
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGKIGLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+FAIAVTIVVVAVP
Sbjct: 352 ATIIGKIGLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVP 411
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CI
Sbjct: 412 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCI 471
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
C +++V N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAIL
Sbjct: 472 CMNVQDVAN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAIL 529
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACD 419
E GL LGG FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACD
Sbjct: 530 ELGLSLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACD 589
Query: 420 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 479
K +NS+GEVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+
Sbjct: 590 KVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCV 649
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539
GIVGIKDP+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP F
Sbjct: 650 GIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVF 709
Query: 540 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599
REK+ EEL +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIG
Sbjct: 710 REKNQEELLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIG 769
Query: 600 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659
LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL+VNF
Sbjct: 770 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNF 829
Query: 660 SSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 719
SSACLTG+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRN
Sbjct: 830 SSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRN 889
Query: 720 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKIN 779
ILGQ++YQF++IW LQ +GKA+F LDGPD L+LNTLIFN FVFCQVFNEISSREME+I+
Sbjct: 890 ILGQAVYQFIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEISSREMEEID 949
Query: 780 VFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVL 839
VFKGIL NYVFV V+ TV FQIIIIE LGTFA+TTPL + QW SI +GFLGMPIAA L
Sbjct: 950 VFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQWIFSIFIGFLGMPIAAGL 1009
Query: 840 KLIQV 844
K I V
Sbjct: 1010 KTIPV 1014
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into the endoplasmic reticulum. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O64806|ACA7_ARATH Putative calcium-transporting ATPase 7, plasma membrane-type OS=Arabidopsis thaliana GN=ACA7 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 1383 bits (3579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 687/845 (81%), Positives = 761/845 (90%), Gaps = 3/845 (0%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTLMIL VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+
Sbjct: 173 MTLMILGVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDK 232
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKITVQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGES
Sbjct: 233 EKKKITVQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGES 292
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPV V A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV
Sbjct: 293 EPVMVTAQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 352
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGKIGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+FAIAVTIVVVAVP
Sbjct: 353 ATIIGKIGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVP 412
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CI
Sbjct: 413 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCI 472
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
C +++V + + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAIL
Sbjct: 473 CMNVQDV--ASKSSSLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAIL 530
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACD 419
E GL LGG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACD
Sbjct: 531 ELGLSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACD 590
Query: 420 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 479
K +NS+GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCI
Sbjct: 591 KVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCI 650
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539
GIVGIKDP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP F
Sbjct: 651 GIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVF 710
Query: 540 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599
REK+ EE+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIG
Sbjct: 711 REKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIG 770
Query: 600 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659
LAMGIAGTEVAKE ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF
Sbjct: 771 LAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 830
Query: 660 SSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 719
SSACLTG+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRN
Sbjct: 831 SSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRN 890
Query: 720 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKIN 779
ILGQ++YQF+IIW LQ +GK++F L G D L+LNTLIFN FVFCQVFNE+SSREME+I+
Sbjct: 891 ILGQAVYQFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEVSSREMEEID 950
Query: 780 VFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVL 839
VFKGIL NYVFV V+ TV FQIIIIE LGTFA+TTPL + QWF SI +GFLGMPIAA L
Sbjct: 951 VFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIVQWFFSIFVGFLGMPIAAGL 1010
Query: 840 KLIQV 844
K I V
Sbjct: 1011 KKIPV 1015
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QMX9|ACA1_ORYSJ Calcium-transporting ATPase 1, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0586600 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1375 bits (3558), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 673/844 (79%), Positives = 751/844 (88%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TL+ILAVCA VSLVVGIA EGWPKGAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD+E
Sbjct: 175 TLIILAVCAFVSLVVGIAMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKE 234
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
KKKI VQV RNGFR+++SIYDLLPGD+VHL +GDQVPADGLF+SGFS+LINESSLTGESE
Sbjct: 235 KKKIQVQVTRNGFRQRLSIYDLLPGDVVHLAIGDQVPADGLFISGFSLLINESSLTGESE 294
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PV VN NPFLLSGTKVQ+GSCKML+TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA
Sbjct: 295 PVVVNEDNPFLLSGTKVQDGSCKMLITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241
TIIGKIGLFFAV+TF V+ QGL ++K EG +WSGDDALE+LE FAIAVTIVVVAVPE
Sbjct: 355 TIIGKIGLFFAVITFIVLSQGLISKKYHEGLLLSWSGDDALEMLEHFAIAVTIVVVAVPE 414
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC
Sbjct: 415 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACIC 474
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
IKEV+N K S +P + K LL+SIFNNTGGEVVI + K +ILGTPTETA+LE
Sbjct: 475 GNIKEVNNPKNASDLCSELPETVVKTLLESIFNNTGGEVVIDQDGKYQILGTPTETALLE 534
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
F L LGG+F+A+R +KIVK+EPFNS KK+M VV++LP GG R HCKGASEI+LAACDKF
Sbjct: 535 FALSLGGNFKAKRDETKIVKMEPFNSTKKRMCVVLKLPGGGCRAHCKGASEIVLAACDKF 594
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
++ G VVPL++ + LN IE FA+EALRTLCL E+ FS + IP +GYTCIGI
Sbjct: 595 MDETGAVVPLDKTTADKLNGIIESFANEALRTLCLGYREMEEGFSVEEQIPLQGYTCIGI 654
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGV+ESVA CRSAGI VRMVTGDNINTAKAIARECGILT++G+AIEGPEFRE
Sbjct: 655 VGIKDPVRPGVRESVATCRSAGIMVRMVTGDNINTAKAIARECGILTEDGLAIEGPEFRE 714
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
KS +EL KLIPKIQVMARSSP+DKHTLVKHLRTT EVVAVTGDGTNDAPALHEADIGLA
Sbjct: 715 KSLDELLKLIPKIQVMARSSPLDKHTLVKHLRTTFNEVVAVTGDGTNDAPALHEADIGLA 774
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVAL+VNFSS
Sbjct: 775 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFSS 834
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
AC TGNAPLTAVQLLWVNMIMDTLGALALATEPPN DLMKR PVGR G FI+NVMWRNIL
Sbjct: 835 ACFTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKREPVGRTGKFITNVMWRNIL 894
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQS YQF+++WYLQT+GK++F LDGPD +++LNT+IFN+FVFCQVFNEISSREMEKINV
Sbjct: 895 GQSFYQFIVMWYLQTQGKSMFGLDGPDAEVVLNTIIFNSFVFCQVFNEISSREMEKINVL 954
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
+GILKNYVF+ VLT TV+FQ I+++ LG FANT PL QW S+LLG +GMPI+A++KL
Sbjct: 955 RGILKNYVFLGVLTSTVVFQFIMVQFLGEFANTIPLTRLQWIASVLLGLIGMPISAIIKL 1014
Query: 842 IQVG 845
+ VG
Sbjct: 1015 LPVG 1018
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os03g0616400 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1268 bits (3282), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 624/843 (74%), Positives = 721/843 (85%), Gaps = 1/843 (0%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TL+IL+ CA+ SLVVGI TEGWP+GAHDG+GIV SILLVV VT TS+Y+QSLQF+DLD+E
Sbjct: 180 TLIILSACAIFSLVVGITTEGWPQGAHDGVGIVASILLVVSVTGTSNYQQSLQFRDLDKE 239
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
K+KI VQV RNG R+++ I DLLPGD VHL +GDQVPADGLF+SGFSVL++ESSLTGESE
Sbjct: 240 KRKILVQVTRNGLRQRVLIDDLLPGDAVHLAVGDQVPADGLFISGFSVLVDESSLTGESE 299
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PV VN NP+LLSGTKV +GSCKMLVT VGMRTQWGKLMA L++GGDDETPLQ +LNGVA
Sbjct: 300 PVFVNEDNPYLLSGTKVLDGSCKMLVTAVGMRTQWGKLMAVLTDGGDDETPLQTRLNGVA 359
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241
IGKIGLFFAV+TF V+ QG+ +K +G +WSGDD LEIL+ FA+AVTIVVVAVPE
Sbjct: 360 NTIGKIGLFFAVLTFIVLSQGIIGQKYLDGLLLSWSGDDVLEILDHFAVAVTIVVVAVPE 419
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVR LAACETMGSAT ICSDKTGTLTTN MTV+KACIC
Sbjct: 420 GLPLAVTLSLAFAMKKMMNDKALVRQLAACETMGSATVICSDKTGTLTTNRMTVVKACIC 479
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
+V+N + TP S+ P A + LL+SIFNNT GEVV + K +ILGTPTETA+LE
Sbjct: 480 GNTIQVNNPQ-TPNMSSNFPEVAVETLLESIFNNTSGEVVTNQDGKYQILGTPTETALLE 538
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
F LLL GD + ++ SKIVKVEPFNS KK+M ++ELP GG+R HCKGASEI+LAACDKF
Sbjct: 539 FALLLDGDCKEKQLGSKIVKVEPFNSTKKRMSTILELPGGGYRAHCKGASEIVLAACDKF 598
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
++ G +VPL++ + LN+ I+ F+SEALRTLCLA E+ FS IP +GYTCIGI
Sbjct: 599 IDERGCIVPLDDKTSSKLNDIIKAFSSEALRTLCLAYREMEEGFSTQEQIPLQGYTCIGI 658
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGV++SVA CRSAGI+VRM+TGDNI+TAKAIARECGILT +GIAIEG EFRE
Sbjct: 659 VGIKDPVRPGVRQSVATCRSAGISVRMITGDNIDTAKAIARECGILTKDGIAIEGAEFRE 718
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
KS EEL LIPK+QV+ARSSP+DKHTLVKHLRT EVVAVTGDGTNDAPAL EADIGLA
Sbjct: 719 KSAEELHDLIPKMQVLARSSPLDKHTLVKHLRTAFNEVVAVTGDGTNDAPALREADIGLA 778
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGIAGTEVAKESADV+ILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVAL+VNF+S
Sbjct: 779 MGIAGTEVAKESADVVILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALLVNFTS 838
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
AC TG+APLTAVQLLWVNMIMDTLGALALATEPPN +LMK++PVGRKG FI+NVMWRNI+
Sbjct: 839 ACFTGDAPLTAVQLLWVNMIMDTLGALALATEPPNNNLMKKAPVGRKGKFITNVMWRNIV 898
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQSLYQF ++WYLQT+GK +F L+G D++LNT+IFNTFVFCQVFNEISSREME INV
Sbjct: 899 GQSLYQFAVMWYLQTQGKHLFGLEGYHADIVLNTIIFNTFVFCQVFNEISSREMEDINVL 958
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
+G+ N +F+ VLT T+ FQ I+++ LG FANTTPL QQW +SIL GFLGMPIAA +KL
Sbjct: 959 RGMAGNSIFLGVLTGTIFFQFILVQFLGDFANTTPLTQQQWLISILFGFLGMPIAAAIKL 1018
Query: 842 IQV 844
I V
Sbjct: 1019 IAV 1021
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|O22218|ACA4_ARATH Calcium-transporting ATPase 4, plasma membrane-type OS=Arabidopsis thaliana GN=ACA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 565/845 (66%), Positives = 691/845 (81%), Gaps = 6/845 (0%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+TL+IL VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDR
Sbjct: 169 ITLIILMVCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDR 228
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI VQV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GES
Sbjct: 229 EKKKIIVQVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGES 288
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EP +VN PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGV
Sbjct: 289 EPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGV 348
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGKIGL FAV+TF V+ K G+ WS +DAL +L++FAI+VTI+VVAVP
Sbjct: 349 ATIIGKIGLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVP 408
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K I
Sbjct: 409 EGLPLAVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWI 468
Query: 301 CEEIKEV-DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 359
C++++E + SK + S ++ LLQ IF NTG EVV + T+ILG+PTE AI
Sbjct: 469 CDKVQERQEGSKESFELELSEEVQST--LLQGIFQNTGSEVVKDKDGNTQILGSPTERAI 526
Query: 360 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 419
LEFGLLLGGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+
Sbjct: 527 LEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCE 586
Query: 420 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 479
++SNGE VPL E + +++ IE FASEALRTLCL ++ S + +P GYT +
Sbjct: 587 NVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMV 644
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539
+VGIKDP+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EF
Sbjct: 645 AVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEF 704
Query: 540 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599
R+ S E+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIG
Sbjct: 705 RDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLR-KIGEVVAVTGDGTNDAPALHEADIG 763
Query: 600 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659
LAMGIAGTEVAKE+ADVII+DDNF TIV VA+WGR+VYINIQKFVQFQLTVNVVALI+NF
Sbjct: 764 LAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINF 823
Query: 660 SSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 719
SAC+TG+APLTAVQLLWVNMIMDTLGALALATEPPN LMKR+P+ R +FI+ MWRN
Sbjct: 824 VSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRN 883
Query: 720 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKIN 779
I GQS+YQ +++ L GK++ +LDGPD +LNT+IFN+FVFCQVFNEI+SRE+EKIN
Sbjct: 884 IAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVFNEINSREIEKIN 943
Query: 780 VFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVL 839
VFKG+ ++VF V+T TV+FQ+II+E LG FA+T PL+ Q W +SIL+G L M +A +L
Sbjct: 944 VFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSLNMIVAVIL 1003
Query: 840 KLIQV 844
K + V
Sbjct: 1004 KCVPV 1008
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol into small vacuoles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9M2L4|ACA11_ARATH Putative calcium-transporting ATPase 11, plasma membrane-type OS=Arabidopsis thaliana GN=ACA11 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1147 bits (2966), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/844 (66%), Positives = 686/844 (81%), Gaps = 7/844 (0%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+TL+IL VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDR
Sbjct: 169 ITLIILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDR 228
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI +QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GES
Sbjct: 229 EKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGES 288
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EP +VN PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGV
Sbjct: 289 EPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGV 348
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGKIGL FAV+TF V+ K G+ WS +DAL +L++FAIAVTI+VVAVP
Sbjct: 349 ATIIGKIGLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVP 408
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K I
Sbjct: 409 EGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWI 468
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
CE IKE + F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AIL
Sbjct: 469 CENIKE----RQEENFQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAIL 524
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGLLLGGD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K
Sbjct: 525 EFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEK 584
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
++SNGE VPL+E + +++ IE FASEALRTLCL ++ D +P GYT +
Sbjct: 585 VVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVA 642
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
+VGIKDP+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR
Sbjct: 643 VVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFR 702
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
E+ ++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGL
Sbjct: 703 NLPPHEMRAILPKIQVMARSLPLDKHTLVNNLR-KMGEVVAVTGDGTNDAPALHEADIGL 761
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKE+ADVII+DDNF+TIV VAKWGR+VYINIQKFVQFQLTVNVVALI+NF
Sbjct: 762 AMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFV 821
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SAC+TG+APLTAVQLLWVNMIMDTLGALALATEPPN LMKR P+GR +FI+ MWRNI
Sbjct: 822 SACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNI 881
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
+GQS+YQ +++ L GK + L+GPD ++LNT+IFN+FVFCQVFNE++SRE+EKINV
Sbjct: 882 IGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINV 941
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
F+G+ K++VFVAV+T TV FQ+II+E LG FA+T PL+ Q W + IL+G + M +A LK
Sbjct: 942 FEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGLK 1001
Query: 841 LIQV 844
I V
Sbjct: 1002 CIPV 1005
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell or into organelles. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2RAS0|ACA5_ORYSJ Probable calcium-transporting ATPase 5, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os11g0140400 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1129 bits (2921), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 558/845 (66%), Positives = 674/845 (79%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTL+IL VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD
Sbjct: 152 MTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDN 211
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI + V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES
Sbjct: 212 EKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGES 271
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
+PV V+ PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGV
Sbjct: 272 DPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGV 331
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
AT+IGKIGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVP
Sbjct: 332 ATVIGKIGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVP 391
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTN+M V K I
Sbjct: 392 EGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNYMVVDKIWI 451
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
E K V ++ + S + + LLLQ IF NT EVV + K +LGTPTE AIL
Sbjct: 452 SEVSKSVTSNTISGELNSVVSSRTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAIL 511
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGL L G AE A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD
Sbjct: 512 EFGLGLEGVHDAEYSACTKVKVEPFNSVKKKMAVLISLPSGTSRWFCKGASEIILQMCDM 571
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
++ +G +PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I
Sbjct: 572 MVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIA 631
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
I GIKDP+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF
Sbjct: 632 IFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFH 691
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
KS EE+ LIP IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGL
Sbjct: 692 SKSPEEMRDLIPNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGL 751
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKESADVI+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF
Sbjct: 752 AMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFV 811
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SAC+TG+APLTAVQLLWVNMIMDTLGALALATEPPN ++MKR PV + +FI+ VMWRNI
Sbjct: 812 SACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKVMWRNI 871
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
+GQSLYQ ++ L G+++ + G D I+NTLIFN+FVFCQVFNEI+SREM+KINV
Sbjct: 872 MGQSLYQLFVLGALMFGGESLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINV 931
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
F+GI+ N++F+AV+ TV FQ++IIE LGTFA+T PLN Q W +S+ LG + + + +LK
Sbjct: 932 FRGIISNWIFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILK 991
Query: 841 LIQVG 845
I VG
Sbjct: 992 CIPVG 996
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q2QY12|ACA4_ORYSJ Probable calcium-transporting ATPase 4, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os12g0136900 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/845 (66%), Positives = 673/845 (79%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTL+IL VCAL+S+ VG+ATEGWPKG +DGLGI++SI LVV VTA SDYKQSLQFK+LD
Sbjct: 174 MTLIILMVCALLSVAVGLATEGWPKGMYDGLGIILSIFLVVMVTAVSDYKQSLQFKELDN 233
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI + V R+G R+KISIYDL+ GDIVHL +GDQVPADGL++ G+S+LI+ESSL+GES
Sbjct: 234 EKKKIFIHVTRDGRRQKISIYDLVVGDIVHLSIGDQVPADGLYIHGYSLLIDESSLSGES 293
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
+PV V+ PF+L+GTKVQ+GS KM+VT VGMRT+WGKLM+TLSEGG+DETPLQVKLNGV
Sbjct: 294 DPVYVSQDKPFILAGTKVQDGSAKMIVTAVGMRTEWGKLMSTLSEGGEDETPLQVKLNGV 353
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGKIGL FA++TF V++ K W DAL I+ +FA AVTI+VVAVP
Sbjct: 354 ATIIGKIGLVFAILTFLVLLVRFLIDKGMTVGLLKWYSTDALTIVNYFATAVTIIVVAVP 413
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKK+MNDKALVRHL+ACETMGSA +IC+DKTGTLTTNHM V K I
Sbjct: 414 EGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVDKIWI 473
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
E K V ++ + S + +S LLLQ IF NT EVV + K +LGTPTE AIL
Sbjct: 474 SEVSKSVTSNTISGELNSVVSSSTLSLLLQGIFENTSAEVVKEKDGKQTVLGTPTERAIL 533
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGL L GD AE +A VKVEPFNSVKK+M V+I LP G R CKGASEIIL CD
Sbjct: 534 EFGLGLKGDHDAEYRACTKVKVEPFNSVKKKMAVLISLPNGTSRWFCKGASEIILQMCDM 593
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
++ +G +PL+EA ++ +TI FAS+ALRTLCLA E+ ++ +A PT G+T I
Sbjct: 594 MVDGDGNAIPLSEAQRKNILDTINSFASDALRTLCLAYKEVDDDIDDNADSPTSGFTLIA 653
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
I GIKDP+RPGVK++V C SAGITVRMVTGDNINTAKAIA+ECGILT++G+AIEGPEF
Sbjct: 654 IFGIKDPVRPGVKDAVKTCMSAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPEFH 713
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
KS EE+ LI IQVMARS P+DKHTLV +LR EVV+VTGDGTNDAPALHEADIGL
Sbjct: 714 SKSTEEMRDLILNIQVMARSLPLDKHTLVTNLRGMFDEVVSVTGDGTNDAPALHEADIGL 773
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKESADVI+LDDNF+TI+ VA+WGR+VYINIQKFVQFQLTVN+VAL++NF
Sbjct: 774 AMGIAGTEVAKESADVIVLDDNFTTIINVARWGRAVYINIQKFVQFQLTVNIVALVINFV 833
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SAC+ G+APLTAVQLLWVNMIMDTLGALALATEPPN ++MKR PV + +FI+ MWRNI
Sbjct: 834 SACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRKGESFITKFMWRNI 893
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
+GQSLYQ ++ L G+ + + G D I+NTLIFN+FVFCQVFNEI+SREM+KINV
Sbjct: 894 MGQSLYQLFVLGALMFGGERLLNIKGADSKSIINTLIFNSFVFCQVFNEINSREMQKINV 953
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
F+GI+ N++F+AV+ TV FQ++IIE LGTFA+T PLN Q W +S+ LG + + + +LK
Sbjct: 954 FRGIISNWIFIAVIAATVAFQVVIIEFLGTFASTVPLNWQHWLLSVGLGSISLIVGVILK 1013
Query: 841 LIQVG 845
I VG
Sbjct: 1014 CIPVG 1018
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q65X71|ACA6_ORYSJ Probable calcium-transporting ATPase 6, plasma membrane-type OS=Oryza sativa subsp. japonica GN=Os05g0495600 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/844 (62%), Positives = 660/844 (78%), Gaps = 3/844 (0%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+TL+IL VCALVS+VVG+AT+GWP G +DG GI++SILLVV VTATSDY+Q+ +F +LDR
Sbjct: 159 LTLIILVVCALVSIVVGLATKGWPMGIYDGFGIILSILLVVLVTATSDYQQARKFMELDR 218
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EK+KI ++V R+ +++ ++DL+ GDI+HL +GD VPADGLF+SG ++I+ESSL+GES
Sbjct: 219 EKQKIYIRVTRDKKTKEVLVHDLVVGDILHLSIGDVVPADGLFISGDCLMIDESSLSGES 278
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPVN++ PFL +G KV +G+ KMLVT VG RT+WGK+M TL+ G DETPLQVKLNGV
Sbjct: 279 EPVNISEERPFLHAGNKVVDGAAKMLVTAVGTRTEWGKIMGTLNGDGVDETPLQVKLNGV 338
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIG+IGL FAV+TF V++ K WS +DAL I+ +FAIAVTI+VVAVP
Sbjct: 339 ATIIGQIGLVFAVLTFLVLLARFLADKGMHVGLLNWSANDALTIVNYFAIAVTIIVVAVP 398
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKK+M+DKALVRHLAACETMGSA+ IC+DKTGTLTTNHM V K I
Sbjct: 399 EGLPLAVTLSLAFAMKKLMHDKALVRHLAACETMGSASCICTDKTGTLTTNHMIVDKVWI 458
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
+ +K V + K + S+I +L+Q IF NT EVV G+ K ILG TETA+L
Sbjct: 459 GD-VKFVGDKKNS-ELKSTISERVMAILIQGIFVNTASEVVKGDDGKNTILGLATETALL 516
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGL L + +KV+PFNSVKK+M V I+LP GG R CKGASEIIL C+
Sbjct: 517 EFGLSLEEHLYDDYNKLTRIKVDPFNSVKKKMSVTIQLPNGGIRTFCKGASEIILEQCNT 576
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
N++G +VPL+E +++ I FASEALRTLC+A ++ +EF D PI +GYT I
Sbjct: 577 IHNTDGNIVPLSEMQKHNVLNIINSFASEALRTLCIAFKDM-DEFPNDQPISDDGYTLIA 635
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
+ GIKDP+RPGVK++V C +AGI VRMVTGDNINTAKAIA+ECGILT++GIAIEG +
Sbjct: 636 VFGIKDPVRPGVKDAVRTCMAAGIRVRMVTGDNINTAKAIAKECGILTEDGIAIEGQQLN 695
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
KS +EL +L+PKIQV+ARS PMDK+ LV L++ EVVAVTGDGTNDAPALHE+DIGL
Sbjct: 696 NKSSDELKELLPKIQVIARSLPMDKYKLVTSLKSMYQEVVAVTGDGTNDAPALHESDIGL 755
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGI GTEVAKESADVII+DDNF TIV VA+WGR+VY+NIQKFVQFQLTVN+VALIVNF
Sbjct: 756 AMGITGTEVAKESADVIIMDDNFETIVNVARWGRAVYLNIQKFVQFQLTVNIVALIVNFV 815
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SAC+ G+APLTAVQLLWVNMIMDTLGALALATEPPN ++MKR PV R NFI+ +MWRNI
Sbjct: 816 SACIIGSAPLTAVQLLWVNMIMDTLGALALATEPPNDEMMKRPPVRRGDNFITRIMWRNI 875
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
LGQ LYQ L++ L GK + ++GP D +NTLIFN+FVFCQVFNEI+ REMEKINV
Sbjct: 876 LGQGLYQLLVLATLMVIGKKLLSIEGPQSDKTINTLIFNSFVFCQVFNEINCREMEKINV 935
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
+GI +N++FV +LT TV+FQ+II+E LGTFANT PL+ + W +S+++G + M I+ +LK
Sbjct: 936 LQGIFRNWIFVGILTATVIFQVIIVEFLGTFANTVPLSGELWLLSVVIGSISMIISVILK 995
Query: 841 LIQV 844
I V
Sbjct: 996 CIPV 999
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol out of the cell, into the endoplasmic reticulum, or into organelles. Oryza sativa subsp. japonica (taxid: 39947) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 845 | ||||||
| 224127276 | 1020 | predicted protein [Populus trichocarpa] | 0.998 | 0.827 | 0.862 | 0.0 | |
| 225438996 | 1019 | PREDICTED: calcium-transporting ATPase 2 | 1.0 | 0.829 | 0.847 | 0.0 | |
| 356541633 | 1015 | PREDICTED: calcium-transporting ATPase 2 | 0.998 | 0.831 | 0.840 | 0.0 | |
| 351720666 | 1019 | plasma membrane Ca2+-ATPase [Glycine max | 0.997 | 0.827 | 0.845 | 0.0 | |
| 289540885 | 1019 | calcium ATPase [Trifolium repens] | 0.997 | 0.827 | 0.838 | 0.0 | |
| 297851218 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.998 | 0.827 | 0.841 | 0.0 | |
| 225458828 | 1018 | PREDICTED: calcium-transporting ATPase 1 | 0.998 | 0.829 | 0.851 | 0.0 | |
| 30690083 | 1020 | autoinhibited Ca2+-ATPase 1 [Arabidopsis | 0.998 | 0.827 | 0.836 | 0.0 | |
| 351721320 | 1014 | plasma membrane Ca2+-ATPase [Glycine max | 0.997 | 0.831 | 0.831 | 0.0 | |
| 509810 | 1020 | envelope Ca2+-ATPase [Arabidopsis thalia | 0.998 | 0.827 | 0.835 | 0.0 |
| >gi|224127276|ref|XP_002320033.1| predicted protein [Populus trichocarpa] gi|222860806|gb|EEE98348.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1469 bits (3802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/844 (86%), Positives = 789/844 (93%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTLMIL VCALVSL+VGIA EGWPKG+HDGLGIV SILLVVFVTATSDYKQSLQFKDLDR
Sbjct: 174 MTLMILGVCALVSLIVGIAMEGWPKGSHDGLGIVASILLVVFVTATSDYKQSLQFKDLDR 233
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKITVQV RN R+KISIYDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGES
Sbjct: 234 EKKKITVQVTRNAVRQKISIYDLLPGDIVHLFIGDQVPADGLFVSGFSVLINESSLTGES 293
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPVNVNA NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV
Sbjct: 294 EPVNVNAANPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 353
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGKIGLFFAVVTFAV+VQGL RKL+EGTHW WSGDDA E+LEFFA+AVTIVVVAVP
Sbjct: 354 ATIIGKIGLFFAVVTFAVLVQGLCNRKLREGTHWIWSGDDAREMLEFFAVAVTIVVVAVP 413
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMMNDKALVR+LAACETMGS+T+ICSDKTGTLTTNHMTV+KAC+
Sbjct: 414 EGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSSTTICSDKTGTLTTNHMTVVKACV 473
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
E +EV +S+ T +FGS+IP A +LL+SIFNNTGGEVV+ E K +ILGTPTETA+L
Sbjct: 474 SGETREVGSSESTTSFGSAIPDLAKSVLLESIFNNTGGEVVVNEERKVQILGTPTETALL 533
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGLLLGGD + +++ SKIVKVEPFNS KK+MGVVIELP GGFR HCKGASEI+LAACDK
Sbjct: 534 EFGLLLGGDSRQKQEKSKIVKVEPFNSTKKRMGVVIELPNGGFRAHCKGASEIVLAACDK 593
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
++SNG VVPL+EA++NHLN+TIE+FASE+LRTLCLA +EIGNE+S ++PIP++GYTCI
Sbjct: 594 VIDSNGVVVPLDEASINHLNDTIERFASESLRTLCLAYLEIGNEYSDESPIPSKGYTCIA 653
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
IVGIKDP+RPGVKESVAICRSAGI VRMVTGDN+ TAKAIARECGILTD+GIAIEGP FR
Sbjct: 654 IVGIKDPVRPGVKESVAICRSAGIVVRMVTGDNLTTAKAIARECGILTDDGIAIEGPAFR 713
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
EKS+EEL +LIPKIQVMARSSP+DKH LV+HLRTT EVVAVTGDGTNDAPALHEADIGL
Sbjct: 714 EKSEEELQELIPKIQVMARSSPLDKHALVRHLRTTFQEVVAVTGDGTNDAPALHEADIGL 773
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS
Sbjct: 774 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 833
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPN DLMKRSPVGRKGNFISNVMWRNI
Sbjct: 834 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNI 893
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
LGQSLYQF++IWYLQTRGKAVFR+DGPD DLILNTLIFN+FVFCQVFNEISSREMEKINV
Sbjct: 894 LGQSLYQFVVIWYLQTRGKAVFRIDGPDSDLILNTLIFNSFVFCQVFNEISSREMEKINV 953
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
FKGILKNYVFV+VL CT FQIII+E LGTFANT+PL+ QQWFVS+ GFLGMPIAA LK
Sbjct: 954 FKGILKNYVFVSVLACTAFFQIIIVEFLGTFANTSPLSWQQWFVSVFFGFLGMPIAAALK 1013
Query: 841 LIQV 844
+I V
Sbjct: 1014 MIPV 1017
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225438996|ref|XP_002284429.1| PREDICTED: calcium-transporting ATPase 2, plasma membrane-type isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1462 bits (3784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 716/845 (84%), Positives = 775/845 (91%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTL+ILAVCALVSL+VGIA EGWP GAHDGLGIV SILLVV VTATSDY+QSLQF+DLD+
Sbjct: 173 MTLIILAVCALVSLIVGIAMEGWPVGAHDGLGIVASILLVVLVTATSDYRQSLQFRDLDK 232
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI++QV RNG+R K+SIYDLLPGDIVHL +GDQVPADGLFVSGF V I+ESSLTGES
Sbjct: 233 EKKKISIQVTRNGYRHKMSIYDLLPGDIVHLSIGDQVPADGLFVSGFCVSIDESSLTGES 292
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPV V+A NPFLLSGTKVQ+GSCKM++TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV
Sbjct: 293 EPVMVSAENPFLLSGTKVQDGSCKMMITTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 352
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
AT IGKIGL FAVVTFAV+VQGLF RKL EGTHW+WSGDDALE+LEFFAIAVTIVVVAVP
Sbjct: 353 ATFIGKIGLVFAVVTFAVLVQGLFNRKLGEGTHWSWSGDDALEMLEFFAIAVTIVVVAVP 412
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT ICSDKTGTLTTNHMTV+K+CI
Sbjct: 413 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATCICSDKTGTLTTNHMTVVKSCI 472
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
C +K+VD +F S IP S KLLLQSIFNN+GGEVVI + K EILG+PT+ A+L
Sbjct: 473 CMNVKDVDRQSNASSFCSEIPDSTVKLLLQSIFNNSGGEVVINKEGKLEILGSPTDAALL 532
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGL LGGDFQ ERQA K++KVEPFNS KK+MGVV+ELPEGG R H KGASEIILAACDK
Sbjct: 533 EFGLFLGGDFQGERQAPKLIKVEPFNSTKKRMGVVLELPEGGLRAHTKGASEIILAACDK 592
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
++SNGEVVPL+EA+++HL TI +FASEALRTLCLA ME+ N FS + PIP GYTCIG
Sbjct: 593 MIDSNGEVVPLDEASIDHLKATINQFASEALRTLCLAYMELENGFSPNDPIPLSGYTCIG 652
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
IVGIKDP+RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP+FR
Sbjct: 653 IVGIKDPVRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPDFR 712
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
EKS+EEL KLIPKIQVMARSSP+DKHTLVKHLRTT GEVVAVTGDGTNDAPALHEADIGL
Sbjct: 713 EKSEEELFKLIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGL 772
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKESADVIILDDNFSTI TVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS
Sbjct: 773 AMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 832
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPP DLMKR+PVGR+GNFISNVMWRNI
Sbjct: 833 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRAPVGRRGNFISNVMWRNI 892
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
LGQSLYQFL+IWYLQ GKA+F+L+GPD DLILNTLIFN+FVFCQVFNEISSREMEKINV
Sbjct: 893 LGQSLYQFLVIWYLQVEGKAIFQLNGPDSDLILNTLIFNSFVFCQVFNEISSREMEKINV 952
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
FKGIL NYVF AVLT TVLFQIIIIE LGT+ANT+PL L QWF+S+ +GFLGMPIAA LK
Sbjct: 953 FKGILDNYVFAAVLTSTVLFQIIIIEYLGTYANTSPLTLSQWFLSVFIGFLGMPIAAALK 1012
Query: 841 LIQVG 845
+I V
Sbjct: 1013 MIPVA 1017
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356541633|ref|XP_003539278.1| PREDICTED: calcium-transporting ATPase 2, plasma membrane-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1446 bits (3742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/844 (84%), Positives = 776/844 (91%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTLMIL VCA+VSL+VGIATEGWPKGAHDGLGIV SILLVVFVTATSDY+QSLQF+DLD+
Sbjct: 172 MTLMILGVCAIVSLLVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFRDLDK 231
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI++QV RNG+R+K+SIY+LLPGDIVHL +GDQVPADGLFVSGFSVLI+ESSLTGES
Sbjct: 232 EKKKISIQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGES 291
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPV V++ NPFLLSGTKVQ+GSCKMLVT+VGMRTQWGKLMATLSEGGDDETPLQVKLNGV
Sbjct: 292 EPVMVSSENPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 351
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGKIGLFFAVVTFAV+VQGL ++KLQ+G+ +W+GDDALE+LEFFA+AVTIVVVAVP
Sbjct: 352 ATIIGKIGLFFAVVTFAVLVQGLVSQKLQQGSLRSWTGDDALELLEFFAVAVTIVVVAVP 411
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K C
Sbjct: 412 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKTCF 471
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
C KEV ++K + + S +P A KLL QSIFNNTGGEVVI + K EILGTPTE AIL
Sbjct: 472 CLNSKEVSSNKDSSSLCSELPEPAVKLLQQSIFNNTGGEVVINQNGKREILGTPTEAAIL 531
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGL LGGDFQ ERQA K+VKVEPFNS KK+M VV+ELP GG R HCKGASEIILAACDK
Sbjct: 532 EFGLSLGGDFQGERQACKLVKVEPFNSTKKKMSVVVELPGGGLRAHCKGASEIILAACDK 591
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
LNSNGEVVPL+E + NHL +TI +FASEALRTLCLA +E+ N FS + PIP GYTCIG
Sbjct: 592 VLNSNGEVVPLDEESTNHLKDTINQFASEALRTLCLAYVELENGFSTEDPIPVSGYTCIG 651
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
+VGIKDP+RPGVKESVA+CRSAGITVRMVTGDNINTAKAIARECGILTD+GIAIEGPEFR
Sbjct: 652 VVGIKDPVRPGVKESVAMCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFR 711
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
EKS +EL +LIPKIQVMARSSP+DKHTLVKHLRTT GEVVAVTGDGTNDAPALHEADIGL
Sbjct: 712 EKSQKELLELIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGL 771
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF+
Sbjct: 772 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFT 831
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SACLTG APLTAVQLLWVNMIMDTLGALALATEPPN DLMKRSPVGRKGNFISNVMWRNI
Sbjct: 832 SACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNI 891
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
LGQSLYQF++IW+LQ+RGK++F L+GP+ DL+LNTLIFNTFVFCQVFNEI+SREMEKINV
Sbjct: 892 LGQSLYQFMVIWFLQSRGKSIFLLEGPNSDLVLNTLIFNTFVFCQVFNEINSREMEKINV 951
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
FKGIL NYVFV V++ TV FQIII+E LGTFANTTPL L QWF +L+GFLGMPIAA LK
Sbjct: 952 FKGILDNYVFVGVISATVFFQIIIVEYLGTFANTTPLTLAQWFFCLLVGFLGMPIAARLK 1011
Query: 841 LIQV 844
I V
Sbjct: 1012 KIPV 1015
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351720666|ref|NP_001237184.1| plasma membrane Ca2+-ATPase [Glycine max] gi|11066056|gb|AAG28436.1|AF195029_1 plasma membrane Ca2+-ATPase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1445 bits (3741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 714/844 (84%), Positives = 776/844 (91%), Gaps = 1/844 (0%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TLMILAVCALVSLVVGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+E
Sbjct: 175 TLMILAVCALVSLVVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKE 234
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
KKKITVQV RN R+K+S+YDLLPGDIVHL +GDQVPADGLFVSGFSVLINESSLTGESE
Sbjct: 235 KKKITVQVTRNSCRQKLSMYDLLPGDIVHLNIGDQVPADGLFVSGFSVLINESSLTGESE 294
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PVNV+ LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA
Sbjct: 295 PVNVSELNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241
TIIGKIGLFFAVVTF+V+VQGLF+RKL+EG+ W WSGDDA++I+EFFAIAVTIVVVAVPE
Sbjct: 355 TIIGKIGLFFAVVTFSVLVQGLFSRKLREGSQWMWSGDDAMQIVEFFAIAVTIVVVAVPE 414
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KA IC
Sbjct: 415 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKAYIC 474
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
+IKEV+ SK F S I SA +LL+SIFNNTGGEVV + K EILG+PTETA+LE
Sbjct: 475 GKIKEVNGSKVYSDFSSDIHDSALAILLESIFNNTGGEVVKNKDEKIEILGSPTETALLE 534
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
FGL LGGDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GGFR HCKGASEIILA+CDK
Sbjct: 535 FGLSLGGDFHKERQRSKLVKVEPFNSIKKRMGVVLQLPDGGFRAHCKGASEIILASCDKV 594
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
++S+GEVV LNE ++NHLN IE FA EALRTLCLA ++I +EFS IPT GYTCIGI
Sbjct: 595 VDSSGEVVALNEDSINHLNNMIETFAGEALRTLCLAYLDIHDEFSVGTAIPTRGYTCIGI 654
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGV+ESVAICRSAGI VRMVTGDNINTAKAIARECGILTD GIAIEGPEFRE
Sbjct: 655 VGIKDPVRPGVRESVAICRSAGIAVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFRE 713
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
KS+EEL +IPKIQVMARSSPMDKHTLVKHLRTT EVV+VTGDGTNDAPALHEADIGLA
Sbjct: 714 KSEEELLDIIPKIQVMARSSPMDKHTLVKHLRTTFQEVVSVTGDGTNDAPALHEADIGLA 773
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY+NIQKFVQFQLTVNVVALIVNFSS
Sbjct: 774 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNVVALIVNFSS 833
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGRKGNFISNVMWRNIL
Sbjct: 834 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNEELMKRPPVGRKGNFISNVMWRNIL 893
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQS+YQF++IW+LQTRGK F LDGPD DLILNTLIFN FVFCQVFNEISSR+ME+INVF
Sbjct: 894 GQSIYQFVVIWFLQTRGKVTFHLDGPDSDLILNTLIFNAFVFCQVFNEISSRDMERINVF 953
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
+GILKNYVFVAVLT TV+FQIII+E LGTFANT+PL+L+QWF S+L G LGMPIAA LK+
Sbjct: 954 EGILKNYVFVAVLTSTVVFQIIIVEFLGTFANTSPLSLKQWFGSVLFGVLGMPIAAALKM 1013
Query: 842 IQVG 845
I VG
Sbjct: 1014 IPVG 1017
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|289540885|gb|ADD09562.1| calcium ATPase [Trifolium repens] | Back alignment and taxonomy information |
|---|
Score = 1444 bits (3739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/844 (83%), Positives = 778/844 (92%), Gaps = 1/844 (0%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TLMILAVCA VSL VGI EGWPKGA DG+GIV SILLVVFVTATSDY+QSLQFKDLD+E
Sbjct: 175 TLMILAVCAFVSLAVGIIMEGWPKGAQDGIGIVASILLVVFVTATSDYRQSLQFKDLDKE 234
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
KKKITVQV RNG+R+KISIYDLLPGDIVHL +GDQVPADGLF+SGFSV INESSLTGESE
Sbjct: 235 KKKITVQVTRNGYRQKISIYDLLPGDIVHLNIGDQVPADGLFLSGFSVCINESSLTGESE 294
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PVNV+ LNPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA
Sbjct: 295 PVNVSDLNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241
TIIGKIGLFFAVVTF+V+VQGLF+RKLQEG+ WTWSGDDA+E++EFFAIAVTIVVVAVPE
Sbjct: 355 TIIGKIGLFFAVVTFSVLVQGLFSRKLQEGSQWTWSGDDAMELVEFFAIAVTIVVVAVPE 414
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC
Sbjct: 415 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKACIC 474
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
+IKEV NS T F +P SA +LL+SIFNNTGGEVV E K EILG+PTETAILE
Sbjct: 475 GKIKEVKNSTDTSDFSFDVPDSAIAILLESIFNNTGGEVVKNENGKIEILGSPTETAILE 534
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
FGL LGGDF ERQ SK+VKVEPFNS+KK+MGVV++LP+GG+R HCKGASEIILAACDKF
Sbjct: 535 FGLSLGGDFHKERQVSKLVKVEPFNSIKKRMGVVLQLPDGGYRAHCKGASEIILAACDKF 594
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
++ NGEVVPL+E ++ HLN+TIEKFA+EALRTLCLA ++I +EF +PIP +GYTCIGI
Sbjct: 595 VDKNGEVVPLDEDSIRHLNDTIEKFANEALRTLCLAYVDIHDEFLVGSPIPIDGYTCIGI 654
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGV+ESVAICR+AGITVRMVTGDNINTAKAIARECGILTD GIAIEGPEFRE
Sbjct: 655 VGIKDPVRPGVRESVAICRAAGITVRMVTGDNINTAKAIARECGILTD-GIAIEGPEFRE 713
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
S+E+L +IPKIQVMARSSPMDKHTLVK LRTT EVV+VTGDGTNDAPALHEADIGLA
Sbjct: 714 MSEEKLLDIIPKIQVMARSSPMDKHTLVKQLRTTFEEVVSVTGDGTNDAPALHEADIGLA 773
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF+S
Sbjct: 774 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFTS 833
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGRKGNFI+NVMWRNI
Sbjct: 834 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRPPVGRKGNFITNVMWRNIT 893
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQS+YQF++IW LQTRGK F +DGPD DLILNTLIFN+FVF QVFNEISSR+ME+INVF
Sbjct: 894 GQSIYQFVVIWLLQTRGKTAFHIDGPDSDLILNTLIFNSFVFFQVFNEISSRDMERINVF 953
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
+GILKNYVF+AVLTCT +FQIII+E LGT+ANT+PL+L+ WFVS+ LG LGMPI A +K+
Sbjct: 954 EGILKNYVFIAVLTCTTIFQIIIVEFLGTYANTSPLSLKLWFVSVFLGVLGMPIGAAIKM 1013
Query: 842 IQVG 845
I VG
Sbjct: 1014 IPVG 1017
|
Source: Trifolium repens Species: Trifolium repens Genus: Trifolium Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297851218|ref|XP_002893490.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] gi|297339332|gb|EFH69749.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1441 bits (3729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/844 (84%), Positives = 771/844 (91%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TLMILA CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDYKQSLQFKDLD E
Sbjct: 175 TLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYKQSLQFKDLDAE 234
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
KKKI VQV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESE
Sbjct: 235 KKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESE 294
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PV+V+ +PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA
Sbjct: 295 PVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241
TIIGKIGLFFAV+TFAV+VQGL +K + +HW W+GD+ + +LE+FA+AVTIVVVAVPE
Sbjct: 355 TIIGKIGLFFAVITFAVLVQGLANQKRLDASHWIWTGDELMAMLEYFAVAVTIVVVAVPE 414
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC
Sbjct: 415 GLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACIC 474
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
E+ KEV+ S F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LE
Sbjct: 475 EQAKEVNVSDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLE 534
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
FGL LGGDFQ RQAS +VKVEPFNS KK+MGVVIELPEG FR HCKGASEI+L +CDK+
Sbjct: 535 FGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPEGHFRAHCKGASEIVLDSCDKY 594
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
+N +GEVVPLNE + HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGI
Sbjct: 595 INKDGEVVPLNEESTGHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGI 654
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFRE
Sbjct: 655 VGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFRE 714
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
KSDEEL KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLA
Sbjct: 715 KSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLA 774
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGI+GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF S
Sbjct: 775 MGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLS 834
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNIL
Sbjct: 835 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNIL 894
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQSLYQ +IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQVFNEISSREMEKI+VF
Sbjct: 895 GQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVF 954
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
KGILKNYVFVAVLTCTV+FQ+IIIELLGTFA+TTPL+L QW VSI+LGFLGMP+AA LK+
Sbjct: 955 KGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLSLGQWLVSIMLGFLGMPVAAALKM 1014
Query: 842 IQVG 845
I VG
Sbjct: 1015 IPVG 1018
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458828|ref|XP_002285297.1| PREDICTED: calcium-transporting ATPase 1, chloroplastic-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1437 bits (3719), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/844 (85%), Positives = 792/844 (93%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTLMILAVCA VSL+VGI EGWPKGAHDGLGIV SILLVVFVTA SDY+QSLQFKDLD
Sbjct: 172 MTLMILAVCAFVSLLVGIIMEGWPKGAHDGLGIVASILLVVFVTAISDYRQSLQFKDLDT 231
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKITVQV R+G R+KISIYDL+PGDIVHL +GDQVPADGLFV GFS+LINESSLTGES
Sbjct: 232 EKKKITVQVTRDGQRQKISIYDLVPGDIVHLSIGDQVPADGLFVLGFSLLINESSLTGES 291
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPV+VN+ NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV
Sbjct: 292 EPVHVNSENPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 351
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGK+GLFFA VTFAV+VQGLF+RKL+EG+HW+WSGDDALE+LEFFA+AVTIVVVAVP
Sbjct: 352 ATIIGKLGLFFAAVTFAVLVQGLFSRKLREGSHWSWSGDDALEMLEFFAVAVTIVVVAVP 411
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMM+DKALVRHLAACETMGSATSICSDKTGTLTTNHMTV+K CI
Sbjct: 412 EGLPLAVTLSLAFAMKKMMHDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKVCI 471
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
C +IKEV +S+ T +F S IP A ++LLQSIFNNTGGE+V + NKTEILGTPTE A+L
Sbjct: 472 CGKIKEVSSSEETSSFCSGIPDFAVRILLQSIFNNTGGEIVTNKDNKTEILGTPTEAALL 531
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGLLLGGDFQAERQASK+VKVEPFNS KK+MGVV+E+PEGGFR H KGASEI+LA+CDK
Sbjct: 532 EFGLLLGGDFQAERQASKLVKVEPFNSAKKRMGVVLEIPEGGFRAHSKGASEIVLASCDK 591
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
++SNG+VVPLNEA+ NHL +TIE+FASEALRTLCLA ME+G+EFSA++P+P++GYTCIG
Sbjct: 592 VIDSNGDVVPLNEASFNHLKDTIERFASEALRTLCLAYMELGSEFSAESPLPSKGYTCIG 651
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
IVGIKDP+RPGVKESVAICRSAGI+VRMVTGDNINTAKAIARECGILTD GIAIEGP FR
Sbjct: 652 IVGIKDPVRPGVKESVAICRSAGISVRMVTGDNINTAKAIARECGILTDEGIAIEGPVFR 711
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
EKS+EEL KLIPKIQVMARSSP+DKH LVKHLRT L EVVAVTGDGTNDAPALHEADIGL
Sbjct: 712 EKSEEELQKLIPKIQVMARSSPLDKHILVKHLRTALEEVVAVTGDGTNDAPALHEADIGL 771
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKESADVII+DDNFSTIVTV KWGRS+YINIQKFVQFQLTVN+VALIVNFS
Sbjct: 772 AMGIAGTEVAKESADVIIMDDNFSTIVTVGKWGRSIYINIQKFVQFQLTVNIVALIVNFS 831
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPN +LMKRSPVGRK NFISNVMWRNI
Sbjct: 832 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRSPVGRKENFISNVMWRNI 891
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
+GQSLYQF+IIW+LQTRGKA F LDGPD DLILNT+IFN+FVFCQVFNEI+SRE+EKINV
Sbjct: 892 IGQSLYQFVIIWFLQTRGKAFFHLDGPDSDLILNTIIFNSFVFCQVFNEINSRELEKINV 951
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
FKG+L+N+VFVAV+TCTV+FQIII++ LGTFANT+PL +QQW SILLGFL MPIAA LK
Sbjct: 952 FKGMLRNHVFVAVVTCTVVFQIIIVQFLGTFANTSPLTMQQWIGSILLGFLCMPIAAALK 1011
Query: 841 LIQV 844
+I V
Sbjct: 1012 MIPV 1015
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30690083|ref|NP_849716.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] gi|30316378|sp|Q37145.3|ACA1_ARATH RecName: Full=Calcium-transporting ATPase 1, chloroplastic; AltName: Full=Ca(2+)-ATPase isoform 1; AltName: Full=Plastid envelope ATPase 1; Flags: Precursor gi|12320888|gb|AAG50579.1|AC079280_10 envelope Ca2+-ATPase [Arabidopsis thaliana] gi|332192757|gb|AEE30878.1| autoinhibited Ca2+-ATPase 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1433 bits (3709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 706/844 (83%), Positives = 769/844 (91%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TLMILA CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD E
Sbjct: 175 TLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAE 234
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
KKKI VQV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESE
Sbjct: 235 KKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESE 294
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PV+V+ +PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA
Sbjct: 295 PVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241
TIIGKIGLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPE
Sbjct: 355 TIIGKIGLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPE 414
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC
Sbjct: 415 GLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACIC 474
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
E+ KEV+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LE
Sbjct: 475 EQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLE 534
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
FGL LGGDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK+
Sbjct: 535 FGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKY 594
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
+N +GEVVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGI
Sbjct: 595 INKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGI 654
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFRE
Sbjct: 655 VGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFRE 714
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
KSDEEL KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLA
Sbjct: 715 KSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLA 774
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGI+GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF S
Sbjct: 775 MGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLS 834
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNIL
Sbjct: 835 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNIL 894
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQSLYQ +IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQVFNEISSREMEKI+VF
Sbjct: 895 GQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVF 954
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
KGILKNYVFVAVLTCTV+FQ+IIIELLGTFA+TTPLNL QW VSI+LGFLGMP+AA LK+
Sbjct: 955 KGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKM 1014
Query: 842 IQVG 845
I VG
Sbjct: 1015 IPVG 1018
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|351721320|ref|NP_001238485.1| plasma membrane Ca2+-ATPase [Glycine max] gi|11066054|gb|AAG28435.1|AF195028_1 plasma membrane Ca2+-ATPase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1431 bits (3705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/844 (83%), Positives = 772/844 (91%), Gaps = 1/844 (0%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTLMIL VCA+VSL+VGIATEGWPKGAHDGLGIV SILLVVFVTATSDY+QSLQF+DLD+
Sbjct: 172 MTLMILGVCAIVSLLVGIATEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFRDLDK 231
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI++QV RNG+R+K+SIY+LLPGDIVHL +GDQVPADGLFVSGFSVLI+ESSLTGES
Sbjct: 232 EKKKISIQVTRNGYRQKMSIYELLPGDIVHLAIGDQVPADGLFVSGFSVLIDESSLTGES 291
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPV VN+ NPFLLSGTKVQ+GSCKMLVT+VGMRTQWGKLMATLSEGGDDETPLQVKLNGV
Sbjct: 292 EPVMVNSENPFLLSGTKVQDGSCKMLVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 351
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240
ATIIGKIGLFFAVVTFAV+VQGL + KLQ+G+ +W+GDDALE+LEFFA+AVTIVVVAVP
Sbjct: 352 ATIIGKIGLFFAVVTFAVLVQGLVSLKLQQGSLRSWTGDDALELLEFFAVAVTIVVVAVP 411
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMMNDKAL+RH AACETMGSAT+ICSDKTGTLTTNHMTV+K C
Sbjct: 412 EGLPLAVTLSLAFAMKKMMNDKALLRHYAACETMGSATTICSDKTGTLTTNHMTVVKTCF 471
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
C KEV N+ + + S +P A KLLL+SIFNNTGGEVV+ + K EILGTPTE AIL
Sbjct: 472 CMNSKEVSNNNAS-SLCSELPEPAVKLLLESIFNNTGGEVVVNQNGKREILGTPTEAAIL 530
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGL LGGDFQ E+QA K+VKVEPFNS KK+M VV+ELP GG R HCKGASEIILAACDK
Sbjct: 531 EFGLSLGGDFQGEKQACKLVKVEPFNSTKKKMSVVVELPGGGLRAHCKGASEIILAACDK 590
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
LNSNGEVVPL+E + +HL TI +FASEALRTLCLA +E+ N FS + PIP GYTCIG
Sbjct: 591 VLNSNGEVVPLDEESTSHLKATINQFASEALRTLCLAYVELENGFSPEDPIPVSGYTCIG 650
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
++GIKDP+RPGVKESVA+CRSAGITVRMVTGDNINTAKAIARECGILTD+GIAIEGPEFR
Sbjct: 651 VIGIKDPVRPGVKESVAMCRSAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPEFR 710
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
EKS EEL +LIPKIQVMARSSP+DKHTLVKHLRTT GEVVAVTGDGTNDAPALHEADIGL
Sbjct: 711 EKSQEELLELIPKIQVMARSSPLDKHTLVKHLRTTFGEVVAVTGDGTNDAPALHEADIGL 770
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF+
Sbjct: 771 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFT 830
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SACLTG APLTAVQLLWVNMIMDTLGALALATEPPN DLMKRSPVGRKGNFISNVMWRNI
Sbjct: 831 SACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDDLMKRSPVGRKGNFISNVMWRNI 890
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
LGQSLYQF++IW+LQ+R K++F L+GP+ DL+LNTLIFN+FVFCQVFNEI+SREMEKINV
Sbjct: 891 LGQSLYQFMVIWFLQSRAKSIFLLEGPNSDLVLNTLIFNSFVFCQVFNEINSREMEKINV 950
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
FKGIL NYVFV V++ TV FQIII+E LGTFANTTPL L QWF +L+GF+GMPIAA LK
Sbjct: 951 FKGILDNYVFVGVISATVFFQIIIVEYLGTFANTTPLTLSQWFFCLLVGFMGMPIAARLK 1010
Query: 841 LIQV 844
I V
Sbjct: 1011 KIPV 1014
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|509810|gb|AAD10211.1| envelope Ca2+-ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1431 bits (3704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 705/844 (83%), Positives = 768/844 (90%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TLMILA CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD E
Sbjct: 175 TLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAE 234
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
KKKI VQV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESE
Sbjct: 235 KKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESE 294
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PV+V+ +PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA
Sbjct: 295 PVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241
TIIGKIGLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+FA+AVTIVVVAVPE
Sbjct: 355 TIIGKIGLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPE 414
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC
Sbjct: 415 GLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACIC 474
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
E+ KEV+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LE
Sbjct: 475 EQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLE 534
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
FGL LGGDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK+
Sbjct: 535 FGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKY 594
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
+N +GEVVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGI
Sbjct: 595 INKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGI 654
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFRE
Sbjct: 655 VGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFRE 714
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
KSDEEL KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLA
Sbjct: 715 KSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLA 774
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGI+GTEVAKESADVIILDDNFSTIV VAKWGRSVYINIQKFVQFQLTVNVVALIVNF S
Sbjct: 775 MGISGTEVAKESADVIILDDNFSTIVIVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLS 834
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNIL
Sbjct: 835 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNIL 894
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQSLYQ +IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQVFNEISSREMEKI+VF
Sbjct: 895 GQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVF 954
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
KGILKNYVFVAVLTCTV+FQ+IIIELLGTFA+TTPLNL QW VSI+LGFLGMP+AA LK+
Sbjct: 955 KGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKM 1014
Query: 842 IQVG 845
I VG
Sbjct: 1015 IPVG 1018
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 845 | ||||||
| TAIR|locus:2029794 | 1020 | ACA1 "autoinhibited Ca2+-ATPas | 0.998 | 0.827 | 0.824 | 0.0 | |
| TAIR|locus:2120096 | 1014 | ACA2 "calcium ATPase 2" [Arabi | 0.996 | 0.830 | 0.805 | 0.0 | |
| TAIR|locus:2059201 | 1015 | ACA7 "auto-regulated Ca2+-ATPa | 0.996 | 0.829 | 0.802 | 0.0 | |
| TAIR|locus:2062673 | 1030 | ACA4 ""autoinhibited Ca(2+)-AT | 0.992 | 0.814 | 0.657 | 2.7e-297 | |
| TAIR|locus:2082528 | 1025 | ACA11 "autoinhibited Ca2+-ATPa | 0.990 | 0.816 | 0.652 | 2e-294 | |
| TAIR|locus:2123924 | 1069 | ACA10 "autoinhibited Ca(2+)-AT | 0.990 | 0.782 | 0.502 | 7.1e-219 | |
| TAIR|locus:2175579 | 1074 | ACA8 ""autoinhibited Ca2+ -ATP | 0.984 | 0.774 | 0.501 | 3.3e-214 | |
| TAIR|locus:2094726 | 1086 | ACA9 "autoinhibited Ca(2+)-ATP | 0.988 | 0.768 | 0.5 | 8.6e-207 | |
| TAIR|locus:2087363 | 1033 | AT3G63380 [Arabidopsis thalian | 0.979 | 0.801 | 0.473 | 1.6e-198 | |
| TAIR|locus:2084578 | 1017 | AT3G22910 [Arabidopsis thalian | 0.977 | 0.812 | 0.469 | 6.7e-191 |
| TAIR|locus:2029794 ACA1 "autoinhibited Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3576 (1263.9 bits), Expect = 0., P = 0.
Identities = 696/844 (82%), Positives = 758/844 (89%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE 61
TLMILA CA VSL+VGI EGWP GAHDGLGIV SILLVVFVTATSDY+QSLQFKDLD E
Sbjct: 175 TLMILAACAFVSLIVGILMEGWPIGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDAE 234
Query: 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESE 121
KKKI VQV R+ R+KISIYDLLPGD+VHL +GDQ+PADGLF+SGFSVLINESSLTGESE
Sbjct: 235 KKKIVVQVTRDKLRQKISIYDLLPGDVVHLGIGDQIPADGLFISGFSVLINESSLTGESE 294
Query: 122 PVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
PV+V+ +PFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA
Sbjct: 295 PVSVSVEHPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 354
Query: 182 TIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXPE 241
TIIGKIGLFFAV+TFAV+VQGL +K + +HW W+ D+ + +LE+F PE
Sbjct: 355 TIIGKIGLFFAVITFAVLVQGLANQKRLDNSHWIWTADELMAMLEYFAVAVTIVVVAVPE 414
Query: 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301
GLPLAVTLSLAFAMKKMMNDKALVR+LAACETMGSAT+ICSDKTGTLTTNHMTV+KACIC
Sbjct: 415 GLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACIC 474
Query: 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILE 361
E+ KEV+ F S IP SA KLLLQSIF NTGGE+V+G+GNKTEILGTPTETA+LE
Sbjct: 475 EQAKEVNGPDAAMKFASGIPESAVKLLLQSIFTNTGGEIVVGKGNKTEILGTPTETALLE 534
Query: 362 FGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKF 421
FGL LGGDFQ RQAS +VKVEPFNS KK+MGVVIELPE FR HCKGASEI+L +CDK+
Sbjct: 535 FGLSLGGDFQEVRQASNVVKVEPFNSTKKRMGVVIELPERHFRAHCKGASEIVLDSCDKY 594
Query: 422 LNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481
+N +GEVVPL+E + +HL IE+FASEALRTLCLA EIG+EFS +APIP+ GYTCIGI
Sbjct: 595 INKDGEVVPLDEKSTSHLKNIIEEFASEALRTLCLAYFEIGDEFSLEAPIPSGGYTCIGI 654
Query: 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541
VGIKDP+RPGVKESVAIC+SAGITVRMVTGDN+ TAKAIARECGILTD+GIAIEGPEFRE
Sbjct: 655 VGIKDPVRPGVKESVAICKSAGITVRMVTGDNLTTAKAIARECGILTDDGIAIEGPEFRE 714
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
KSDEEL KLIPK+QVMARSSPMDKHTLV+ LRT EVVAVTGDGTNDAPALHEADIGLA
Sbjct: 715 KSDEELLKLIPKLQVMARSSPMDKHTLVRLLRTMFQEVVAVTGDGTNDAPALHEADIGLA 774
Query: 602 MGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661
MGI+GTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF S
Sbjct: 775 MGISGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFLS 834
Query: 662 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNIL 721
ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPP DLMKRSPVGRKGNFISNVMWRNIL
Sbjct: 835 ACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPQDDLMKRSPVGRKGNFISNVMWRNIL 894
Query: 722 GQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVF 781
GQSLYQ +IIW LQT+GK +F LDGPD DL LNTLIFN FVFCQVFNEISSREMEKI+VF
Sbjct: 895 GQSLYQLVIIWCLQTKGKTMFGLDGPDSDLTLNTLIFNIFVFCQVFNEISSREMEKIDVF 954
Query: 782 KGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKL 841
KGILKNYVFVAVLTCTV+FQ+IIIELLGTFA+TTPLNL QW VSI+LGFLGMP+AA LK+
Sbjct: 955 KGILKNYVFVAVLTCTVVFQVIIIELLGTFADTTPLNLGQWLVSIILGFLGMPVAAALKM 1014
Query: 842 IQVG 845
I VG
Sbjct: 1015 IPVG 1018
|
|
| TAIR|locus:2120096 ACA2 "calcium ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3504 (1238.5 bits), Expect = 0., P = 0.
Identities = 681/845 (80%), Positives = 754/845 (89%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTLMIL VCA VSL+VGIATEGWPKG+HDGLGI SILLVVFVTATSDY+QSLQF+DLD+
Sbjct: 172 MTLMILGVCAFVSLIVGIATEGWPKGSHDGLGIAASILLVVFVTATSDYRQSLQFRDLDK 231
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKITVQV RNGFR+K+SIYDLLPGDIVHL +GDQVPADGLF+SGFSV+I+ESSLTGES
Sbjct: 232 EKKKITVQVTRNGFRQKLSIYDLLPGDIVHLAIGDQVPADGLFLSGFSVVIDESSLTGES 291
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPV VNA NPFL+SGTKVQ+GSCKM++TTVGMRTQWGKLMATL+EGGDDETPLQVKLNGV
Sbjct: 292 EPVMVNAQNPFLMSGTKVQDGSCKMMITTVGMRTQWGKLMATLTEGGDDETPLQVKLNGV 351
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXP 240
ATIIGKIGLFFAVVTFAV+VQG+F RKL GTHW WSGD+ALE+LE+F P
Sbjct: 352 ATIIGKIGLFFAVVTFAVLVQGMFMRKLSTGTHWVWSGDEALELLEYFAIAVTIVVVAVP 411
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CI
Sbjct: 412 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCI 471
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
C +++V N KG+ + S IP SA KLL+QSIFNNTGGEVV+ + KTE+LGTPTETAIL
Sbjct: 472 CMNVQDVAN-KGS-SLQSEIPESAVKLLIQSIFNNTGGEVVVNKHGKTELLGTPTETAIL 529
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACD 419
E GL LGG FQ ER++ K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACD
Sbjct: 530 ELGLSLGGKFQEERKSYKVIKVEPFNSTKKRMGVVIELPEGGRMRAHTKGASEIVLAACD 589
Query: 420 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 479
K +NS+GEVVPL+E ++ +LN TI +FA+EALRTLCLA M+I FS D IP G+TC+
Sbjct: 590 KVVNSSGEVVPLDEESIKYLNVTINEFANEALRTLCLAYMDIEGGFSPDDAIPASGFTCV 649
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539
GIVGIKDP+RPGVKESV +CR AGITVRMVTGDNINTAKAIARECGILTD+GIAIEGP F
Sbjct: 650 GIVGIKDPVRPGVKESVELCRRAGITVRMVTGDNINTAKAIARECGILTDDGIAIEGPVF 709
Query: 540 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599
REK+ EEL +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIG
Sbjct: 710 REKNQEELLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIG 769
Query: 600 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659
LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL+VNF
Sbjct: 770 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALVVNF 829
Query: 660 SSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 719
SSACLTG+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRN
Sbjct: 830 SSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRLPVGRRGNFITNAMWRN 889
Query: 720 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKIN 779
ILGQ++YQF++IW LQ +GKA+F LDGPD L+LNTLIFN FVFCQVFNEISSREME+I+
Sbjct: 890 ILGQAVYQFIVIWILQAKGKAMFGLDGPDSTLMLNTLIFNCFVFCQVFNEISSREMEEID 949
Query: 780 VFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVL 839
VFKGIL NYVFV V+ TV FQIIIIE LGTFA+TTPL + QW SI +GFLGMPIAA L
Sbjct: 950 VFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTITQWIFSIFIGFLGMPIAAGL 1009
Query: 840 KLIQV 844
K I V
Sbjct: 1010 KTIPV 1014
|
|
| TAIR|locus:2059201 ACA7 "auto-regulated Ca2+-ATPase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3462 (1223.7 bits), Expect = 0., P = 0.
Identities = 678/845 (80%), Positives = 751/845 (88%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
MTLMIL VCA VSL+VGIATEGWP+G+HDGLGIV SILLVVFVTATSDY+QSLQF+DLD+
Sbjct: 173 MTLMILGVCAFVSLIVGIATEGWPQGSHDGLGIVASILLVVFVTATSDYRQSLQFRDLDK 232
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKITVQV RNGFR+K+SIYDLLPGD+VHL +GDQVPADGLF+SGFSV+I+ESSLTGES
Sbjct: 233 EKKKITVQVTRNGFRQKMSIYDLLPGDVVHLAIGDQVPADGLFLSGFSVVIDESSLTGES 292
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EPV V A NPFLLSGTKVQ+GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV
Sbjct: 293 EPVMVTAQNPFLLSGTKVQDGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 352
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXP 240
ATIIGKIGL FA+VTFAV+VQG+F RKL G HW WSGDDALE+LE+F P
Sbjct: 353 ATIIGKIGLSFAIVTFAVLVQGMFMRKLSLGPHWWWSGDDALELLEYFAIAVTIVVVAVP 412
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSAT+ICSDKTGTLTTNHMTV+K+CI
Sbjct: 413 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATTICSDKTGTLTTNHMTVVKSCI 472
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
C +++V SK + + S IP +A KLLLQ IFNNTGGEVV+ E KTEILGTPTETAIL
Sbjct: 473 CMNVQDVA-SKSS-SLQSDIPEAALKLLLQLIFNNTGGEVVVNERGKTEILGTPTETAIL 530
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGG-FRVHCKGASEIILAACD 419
E GL LGG FQ ERQ++K++KVEPFNS KK+MGVVIELPEGG R H KGASEI+LAACD
Sbjct: 531 ELGLSLGGKFQEERQSNKVIKVEPFNSTKKRMGVVIELPEGGRIRAHTKGASEIVLAACD 590
Query: 420 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 479
K +NS+GEVVPL++ ++ LN TI++FA+EALRTLCLA M+I + FSAD IP +G+TCI
Sbjct: 591 KVINSSGEVVPLDDESIKFLNVTIDEFANEALRTLCLAYMDIESGFSADEGIPEKGFTCI 650
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539
GIVGIKDP+RPGV+ESV +CR AGI VRMVTGDNINTAKAIARECGILTD+GIAIEGP F
Sbjct: 651 GIVGIKDPVRPGVRESVELCRRAGIMVRMVTGDNINTAKAIARECGILTDDGIAIEGPVF 710
Query: 540 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599
REK+ EE+ +LIPKIQVMARSSPMDKHTLVK LRTT EVVAVTGDGTNDAPALHEADIG
Sbjct: 711 REKNQEEMLELIPKIQVMARSSPMDKHTLVKQLRTTFDEVVAVTGDGTNDAPALHEADIG 770
Query: 600 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659
LAMGIAGTEVAKE ADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF
Sbjct: 771 LAMGIAGTEVAKEIADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 830
Query: 660 SSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 719
SSACLTG+APLTAVQLLWVNMIMDTLGALALATEPPN +LMKR PVGR+GNFI+N MWRN
Sbjct: 831 SSACLTGSAPLTAVQLLWVNMIMDTLGALALATEPPNNELMKRMPVGRRGNFITNAMWRN 890
Query: 720 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKIN 779
ILGQ++YQF+IIW LQ +GK++F L G D L+LNTLIFN FVFCQVFNE+SSREME+I+
Sbjct: 891 ILGQAVYQFIIIWILQAKGKSMFGLVGSDSTLVLNTLIFNCFVFCQVFNEVSSREMEEID 950
Query: 780 VFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVL 839
VFKGIL NYVFV V+ TV FQIIIIE LGTFA+TTPL + QWF SI +GFLGMPIAA L
Sbjct: 951 VFKGILDNYVFVVVIGATVFFQIIIIEFLGTFASTTPLTIVQWFFSIFVGFLGMPIAAGL 1010
Query: 840 KLIQV 844
K I V
Sbjct: 1011 KKIPV 1015
|
|
| TAIR|locus:2062673 ACA4 ""autoinhibited Ca(2+)-ATPase, isoform 4"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2854 (1009.7 bits), Expect = 2.7e-297, P = 2.7e-297
Identities = 556/845 (65%), Positives = 679/845 (80%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+TL+IL VCA+VS+ VG+ATEG+P+G +DG GI++SILLVV VTA SDYKQSLQF+DLDR
Sbjct: 169 ITLIILMVCAVVSIGVGVATEGFPRGMYDGTGILLSILLVVMVTAISDYKQSLQFRDLDR 228
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI VQV R+G R++ISI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GES
Sbjct: 229 EKKKIIVQVTRDGSRQEISIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGES 288
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EP +VN PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TL +GG+DETPLQVKLNGV
Sbjct: 289 EPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMETLVDGGEDETPLQVKLNGV 348
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXP 240
ATIIGKIGL FAV+TF V+ K G+ WS +DAL +L++F P
Sbjct: 349 ATIIGKIGLSFAVLTFVVLCIRFVLDKATSGSFTNWSSEDALTLLDYFAISVTIIVVAVP 408
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMKK+M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K I
Sbjct: 409 EGLPLAVTLSLAFAMKKLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWI 468
Query: 301 CEEIKE-VDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 359
C++++E + SK +F + LLQ IF NTG EVV + T+ILG+PTE AI
Sbjct: 469 CDKVQERQEGSK--ESFELELSEEVQSTLLQGIFQNTGSEVVKDKDGNTQILGSPTERAI 526
Query: 360 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 419
LEFGLLLGGDF +R+ KI+K+EPFNS KK+M V+I LP GG R CKGASEI+L C+
Sbjct: 527 LEFGLLLGGDFNTQRKEHKILKIEPFNSDKKKMSVLIALPGGGARAFCKGASEIVLKMCE 586
Query: 420 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 479
++SNGE VPL E + +++ IE FASEALRTLCL ++ S + +P GYT +
Sbjct: 587 NVVDSNGESVPLTEERITSISDIIEGFASEALRTLCLVYKDLDEAPSGE--LPDGGYTMV 644
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539
+VGIKDP+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGI T+ G+AIEG EF
Sbjct: 645 AVVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGIYTEGGLAIEGSEF 704
Query: 540 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599
R+ S E+ +IPKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIG
Sbjct: 705 RDLSPHEMRAIIPKIQVMARSLPLDKHTLVSNLRK-IGEVVAVTGDGTNDAPALHEADIG 763
Query: 600 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659
LAMGIAGTEVAKE+ADVII+DDNF TIV VA+WGR+VYINIQKFVQFQLTVNVVALI+NF
Sbjct: 764 LAMGIAGTEVAKENADVIIMDDNFKTIVNVARWGRAVYINIQKFVQFQLTVNVVALIINF 823
Query: 660 SSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRN 719
SAC+TG+APLTAVQLLWVNMIMDTLGALALATEPPN LMKR+P+ R +FI+ MWRN
Sbjct: 824 VSACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRAPIARTASFITKTMWRN 883
Query: 720 ILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKIN 779
I GQS+YQ +++ L GK++ +LDGPD +LNT+IFN+FVFCQVFNEI+SRE+EKIN
Sbjct: 884 IAGQSVYQLIVLGILNFAGKSLLKLDGPDSTAVLNTVIFNSFVFCQVFNEINSREIEKIN 943
Query: 780 VFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVL 839
VFKG+ ++VF V+T TV+FQ+II+E LG FA+T PL+ Q W +SIL+G L M +A +L
Sbjct: 944 VFKGMFNSWVFTWVMTVTVVFQVIIVEFLGAFASTVPLSWQHWLLSILIGSLNMIVAVIL 1003
Query: 840 KLIQV 844
K + V
Sbjct: 1004 KCVPV 1008
|
|
| TAIR|locus:2082528 ACA11 "autoinhibited Ca2+-ATPase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2827 (1000.2 bits), Expect = 2.0e-294, P = 2.0e-294
Identities = 551/844 (65%), Positives = 674/844 (79%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+TL+IL VCA+VS+ VG+ATEG+PKG +DG GI++SI+LVV VTA SDYKQSLQF+DLDR
Sbjct: 169 ITLIILMVCAVVSIGVGVATEGFPKGMYDGTGILLSIILVVMVTAISDYKQSLQFRDLDR 228
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EKKKI +QV R+G R+++SI+DL+ GD+VHL +GDQVPADG+F+SG+++ I+ESSL+GES
Sbjct: 229 EKKKIIIQVTRDGSRQEVSIHDLVVGDVVHLSIGDQVPADGIFISGYNLEIDESSLSGES 288
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
EP +VN PFLLSGTKVQNGS KMLVTTVGMRT+WGKLM TLSEGG+DETPLQVKLNGV
Sbjct: 289 EPSHVNKEKPFLLSGTKVQNGSAKMLVTTVGMRTEWGKLMDTLSEGGEDETPLQVKLNGV 348
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFXXXXXXXXXXXP 240
ATIIGKIGL FAV+TF V+ K G+ WS +DAL +L++F P
Sbjct: 349 ATIIGKIGLGFAVLTFVVLCIRFVVEKATAGSITEWSSEDALTLLDYFAIAVTIIVVAVP 408
Query: 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300
EGLPLAVTLSLAFAMK++M+D+ALVRHLAACETMGS+T IC+DKTGTLTTNHM V K I
Sbjct: 409 EGLPLAVTLSLAFAMKQLMSDRALVRHLAACETMGSSTCICTDKTGTLTTNHMVVNKVWI 468
Query: 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
CE IKE F ++ +L+Q+IF NTG EVV + KT+ILG+PTE AIL
Sbjct: 469 CENIKERQEEN----FQLNLSEQVKNILIQAIFQNTGSEVVKDKEGKTQILGSPTERAIL 524
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
EFGLLLGGD +R+ KI+K+EPFNS KK+M V+ G R CKGASEI+L C+K
Sbjct: 525 EFGLLLGGDVDTQRREHKILKIEPFNSDKKKMSVLTSHSGGKVRAFCKGASEIVLKMCEK 584
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
++SNGE VPL+E + +++ IE FASEALRTLCL ++ D +P GYT +
Sbjct: 585 VVDSNGESVPLSEEKIASISDVIEGFASEALRTLCLVYTDLDEAPRGD--LPNGGYTLVA 642
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
+VGIKDP+RPGV+E+V C++AGITVRMVTGDNI+TAKAIA+ECGILT G+AIEG +FR
Sbjct: 643 VVGIKDPVRPGVREAVQTCQAAGITVRMVTGDNISTAKAIAKECGILTAGGVAIEGSDFR 702
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
E+ ++PKIQVMARS P+DKHTLV +LR +GEVVAVTGDGTNDAPALHEADIGL
Sbjct: 703 NLPPHEMRAILPKIQVMARSLPLDKHTLVNNLRK-MGEVVAVTGDGTNDAPALHEADIGL 761
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAGTEVAKE+ADVII+DDNF+TIV VAKWGR+VYINIQKFVQFQLTVNVVALI+NF
Sbjct: 762 AMGIAGTEVAKENADVIIMDDNFATIVNVAKWGRAVYINIQKFVQFQLTVNVVALIINFV 821
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNI 720
SAC+TG+APLTAVQLLWVNMIMDTLGALALATEPPN LMKR P+GR +FI+ MWRNI
Sbjct: 822 SACITGSAPLTAVQLLWVNMIMDTLGALALATEPPNEGLMKRQPIGRTASFITRAMWRNI 881
Query: 721 LGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINV 780
+GQS+YQ +++ L GK + L+GPD ++LNT+IFN+FVFCQVFNE++SRE+EKINV
Sbjct: 882 IGQSIYQLIVLGILNFAGKQILNLNGPDSTIVLNTIIFNSFVFCQVFNEVNSREIEKINV 941
Query: 781 FKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLK 840
F+G+ K++VFVAV+T TV FQ+II+E LG FA+T PL+ Q W + IL+G + M +A LK
Sbjct: 942 FEGMFKSWVFVAVMTATVGFQVIIVEFLGAFASTVPLSWQHWLLCILIGSVSMILAVGLK 1001
Query: 841 LIQV 844
I V
Sbjct: 1002 CIPV 1005
|
|
| TAIR|locus:2123924 ACA10 "autoinhibited Ca(2+)-ATPase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2114 (749.2 bits), Expect = 7.1e-219, P = 7.1e-219
Identities = 435/865 (50%), Positives = 597/865 (69%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+TL+IL V A+ SL +GI TEG KG +DG+ I ++LLV+ VTATSDY+QSLQF++L+
Sbjct: 192 LTLIILIVAAVASLALGIKTEGIEKGWYDGISIAFAVLLVIVVTATSDYRQSLQFQNLNE 251
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EK+ I ++V R+G R +ISIYD++ GD++ L +GDQVPADG+ V+G S+ ++ESS+TGES
Sbjct: 252 EKRNIRLEVTRDGRRVEISIYDIVVGDVIPLNIGDQVPADGVLVAGHSLAVDESSMTGES 311
Query: 121 EPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 179
+ V N+ +PFL+SG KV +G+ MLVT VG+ T+WG LMA++SE ETPLQV+LNG
Sbjct: 312 KIVQKNSTKHPFLMSGCKVADGNGTMLVTGVGVNTEWGLLMASVSEDNGGETPLQVRLNG 371
Query: 180 VATIIGKIGLFFAVVTFAVMVQGLFT--RKLQEGTHWTWSGDDALE-----ILEFFXXXX 232
VAT IG +GL A V V+V FT K ++G G E ++E F
Sbjct: 372 VATFIGIVGLTVAGVVLFVLVVRYFTGHTKNEQGGPQFIGGKTKFEHVLDDLVEIFTVAV 431
Query: 233 XXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNH 292
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N
Sbjct: 432 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNE 491
Query: 293 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILG 352
MTV++ C ++++D+ P S +P++ + +L++ I +NT G V E + ++ G
Sbjct: 492 MTVVE-CYAG-LQKMDS----PDSSSKLPSAFTSILVEGIAHNTTGSVFRSESGEIQVSG 545
Query: 353 TPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 412
+PTE AIL + + LG DF A + S V+ PFNS KK+ GV ++ P+ +H KGA+E
Sbjct: 546 SPTERAILNWAIKLGMDFDALKSESSAVQFFPFNSEKKRGGVAVKSPDSSVHIHWKGAAE 605
Query: 413 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI-GNEFSADAP- 470
I+L +C +++ + V ++E + L + I+ A+ +LR + +A ++ D
Sbjct: 606 IVLGSCTHYMDESESFVDMSEDKMGGLKDAIDDMAARSLRCVAIAFRTFEADKIPTDEEQ 665
Query: 471 -----IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG 525
+P + + IVGIKDP RPGVK SV +C+ AG+ VRMVTGDNI TAKAIA ECG
Sbjct: 666 LSRWELPEDDLILLAIVGIKDPCRPGVKNSVLLCQQAGVKVRMVTGDNIQTAKAIALECG 725
Query: 526 ILTDNGIA-----IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVV 580
IL + A IEG FR S+EE ++ +I VM RSSP DK LV+ L+ G VV
Sbjct: 726 ILASDSDASEPNLIEGKVFRSYSEEERDRICEEISVMGRSSPNDKLLLVQSLKRR-GHVV 784
Query: 581 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 640
AVTGDGTNDAPALHEADIGLAMGI GTEVAKE +D+IILDDNF ++V V +WGRSVY NI
Sbjct: 785 AVTGDGTNDAPALHEADIGLAMGIQGTEVAKEKSDIIILDDNFESVVKVVRWGRSVYANI 844
Query: 641 QKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLM 700
QKF+QFQLTVNV AL++N +A G PLTAVQLLWVN+IMDTLGALALATEPP LM
Sbjct: 845 QKFIQFQLTVNVAALVINVVAAISAGEVPLTAVQLLWVNLIMDTLGALALATEPPTDHLM 904
Query: 701 KRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG-PDPDLILNTLIFN 759
R+PVGR+ I+N+MWRN+ Q++YQ ++ L RG ++ L P+ + + NT+IFN
Sbjct: 905 DRAPVGRREPLITNIMWRNLFIQAMYQVTVLLILNFRGISILHLKSKPNAERVKNTVIFN 964
Query: 760 TFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNL 819
FV CQVFNE ++R+ ++IN+F+G+L+N++FV +++ T++ Q++I+E LGTFA+TT L+
Sbjct: 965 AFVICQVFNEFNARKPDEINIFRGVLRNHLFVGIISITIVLQVVIVEFLGTFASTTKLDW 1024
Query: 820 QQWFVSILLGFLGMPIAAVLKLIQV 844
+ W V I +G + P+A + KLI V
Sbjct: 1025 EMWLVCIGIGSISWPLAVIGKLIPV 1049
|
|
| TAIR|locus:2175579 ACA8 ""autoinhibited Ca2+ -ATPase, isoform 8"" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2070 (733.7 bits), Expect = 3.3e-214, P = 3.3e-214
Identities = 435/868 (50%), Positives = 590/868 (67%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+TL+IL V A+ SL +GI TEG +G +DG I +++LV+ VTA SDYKQSLQF++L+
Sbjct: 192 LTLIILMVAAVASLALGIKTEGIKEGWYDGGSIAFAVILVIVVTAVSDYKQSLQFQNLND 251
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EK+ I ++V R G R +ISIYD++ GD++ L +G+QVPADG+ +SG S+ ++ESS+TGES
Sbjct: 252 EKRNIHLEVLRGGRRVEISIYDIVVGDVIPLNIGNQVPADGVLISGHSLALDESSMTGES 311
Query: 121 EPVNVNA-LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 179
+ VN +A +PFL+SG KV +G+ MLVT VG+ T+WG LMA++SE +ETPLQV+LNG
Sbjct: 312 KIVNKDANKDPFLMSGCKVADGNGSMLVTGVGVNTEWGLLMASISEDNGEETPLQVRLNG 371
Query: 180 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQE---GTHW----TWSGDDALEILEFFXXXX 232
VAT IG IGL A +++ FT ++ G + T G ++++
Sbjct: 372 VATFIGSIGLAVAAAVLVILLTRYFTGHTKDNNGGPQFVKGKTKVGHVIDDVVKVLTVAV 431
Query: 233 XXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNH 292
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N
Sbjct: 432 TIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQ 491
Query: 293 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEIL 351
MTV+++ K+ D + +PA+ + L+++ I NT G + + EG E
Sbjct: 492 MTVVESYAGG--KKTDTEQ--------LPATITSLVVEGISQNTTGSIFVPEGGGDLEYS 541
Query: 352 GTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGAS 411
G+PTE AIL +G+ LG +F+ R S I+ PFNS KK+ GV ++ +G VH KGAS
Sbjct: 542 GSPTEKAILGWGVKLGMNFETARSQSSILHAFPFNSEKKRGGVAVKTADGEVHVHWKGAS 601
Query: 412 EIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC-------MEIGNE 464
EI+LA+C +++ +G V P+ + + I A LR + LA + G E
Sbjct: 602 EIVLASCRSYIDEDGNVAPMTDDKASFFKNGINDMAGRTLRCVALAFRTYEAEKVPTGEE 661
Query: 465 FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 524
S +P + + IVGIKDP RPGVK+SV +C++AG+ VRMVTGDN+ TA+AIA EC
Sbjct: 662 LSKWV-LPEDDLILLAIVGIKDPCRPGVKDSVVLCQNAGVKVRMVTGDNVQTARAIALEC 720
Query: 525 GILTDNG-----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 579
GIL+ + IEG FRE +D E K+ KI VM RSSP DK LV+ LR G V
Sbjct: 721 GILSSDADLSEPTLIEGKSFREMTDAERDKISDKISVMGRSSPNDKLLLVQSLRRQ-GHV 779
Query: 580 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 639
VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES+D+IILDDNF+++V V +WGRSVY N
Sbjct: 780 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESSDIIILDDNFASVVKVVRWGRSVYAN 839
Query: 640 IQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDL 699
IQKF+QFQLTVNV AL++N +A +G+ PLTAVQLLWVN+IMDTLGALALATEPP L
Sbjct: 840 IQKFIQFQLTVNVAALVINVVAAISSGDVPLTAVQLLWVNLIMDTLGALALATEPPTDHL 899
Query: 700 MKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPD---LILNTL 756
M R PVGRK I+N+MWRN+L Q++YQ ++ L RG ++ L+ + + NT+
Sbjct: 900 MGRPPVGRKEPLITNIMWRNLLIQAIYQVSVLLTLNFRGISILGLEHEVHEHATRVKNTI 959
Query: 757 IFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTP 816
IFN FV CQ FNE ++R+ ++ N+FKG++KN +F+ ++ T++ Q+II+E LG FA+TT
Sbjct: 960 IFNAFVLCQAFNEFNARKPDEKNIFKGVIKNRLFMGIIVITLVLQVIIVEFLGKFASTTK 1019
Query: 817 LNLQQWFVSILLGFLGMPIAAVLKLIQV 844
LN +QW + + +G + P+A V K I V
Sbjct: 1020 LNWKQWLICVGIGVISWPLALVGKFIPV 1047
|
|
| TAIR|locus:2094726 ACA9 "autoinhibited Ca(2+)-ATPase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2000 (709.1 bits), Expect = 8.6e-207, P = 8.6e-207
Identities = 434/868 (50%), Positives = 582/868 (67%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+TL+IL + A+ SL +GI TEG +G DG I ++LLV+ VTA SDY+QSLQF++L+
Sbjct: 206 LTLIILIIAAVTSLALGIKTEGLKEGWLDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLND 265
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
EK+ I ++V R G KISIYD++ GD++ L +GDQVPADG+ +SG S+ I+ESS+TGES
Sbjct: 266 EKRNIQLEVMRGGRTVKISIYDVVVGDVIPLRIGDQVPADGVLISGHSLAIDESSMTGES 325
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
+ V+ + +PFL+SG KV +G MLVT VG+ T+WG LMA++SE +ETPLQV+LNG+
Sbjct: 326 KIVHKDQKSPFLMSGCKVADGVGNMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGL 385
Query: 181 ATIIGKIGLFFAVVTFAVMVQGLFTRKLQE---GTHW---TWSGDDALE-ILEFFXXXXX 233
AT IG +GL A+V ++ FT Q+ T + T S D ++ ++ F
Sbjct: 386 ATFIGIVGLSVALVVLVALLVRYFTGTTQDTNGATQFIKGTTSISDIVDDCVKIFTIAVT 445
Query: 234 XXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHM 293
PEGLPLAVTL+LA++M+KMM DKALVR L+ACETMGSAT+ICSDKTGTLT N M
Sbjct: 446 IVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQM 505
Query: 294 TVLKACICEEIKEV-DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIG-EGNKTEIL 351
TV++ +V DN G P + L+ + + NT G + +G + EI
Sbjct: 506 TVVETYAGGSKMDVADNPSGLH------PKLVA-LISEGVAQNTTGNIFHPKDGGEVEIS 558
Query: 352 GTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGAS 411
G+PTE AIL + LG F R S I+ PFNS KK+ GV + + +H KGA+
Sbjct: 559 GSPTEKAILSWAYKLGMKFDTIRSESAIIHAFPFNSEKKRGGVAVLRGDSEVFIHWKGAA 618
Query: 412 EIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC--MEIGN----EF 465
EI+LA C ++++SNG + + E+ I+ A +LR + +AC E+ +
Sbjct: 619 EIVLACCTQYMDSNGTLQSI-ESQKEFFRVAIDSMAKNSLRCVAIACRTQELNQVPKEQE 677
Query: 466 SADA-PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 524
D +P + + IVGIKDP RPGV+E+V IC SAG+ VRMVTGDN+ TAKAIA EC
Sbjct: 678 DLDKWALPEDELILLAIVGIKDPCRPGVREAVRICTSAGVKVRMVTGDNLQTAKAIALEC 737
Query: 525 GILTDNGIA-----IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 579
GIL+ + A IEG FRE S++E ++ KI VM RSSP DK LV+ LR G+V
Sbjct: 738 GILSSDTEAVEPTIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKN-GDV 796
Query: 580 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 639
VAVTGDGTNDAPALHEADIGL+MGI+GTEVAKES+D+IILDDNF+++V V +WGRSVY N
Sbjct: 797 VAVTGDGTNDAPALHEADIGLSMGISGTEVAKESSDIIILDDNFASVVKVVRWGRSVYAN 856
Query: 640 IQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDL 699
IQKF+QFQLTVNV ALI+N +A +G+ PL AVQLLWVN+IMDTLGALALATEPP L
Sbjct: 857 IQKFIQFQLTVNVAALIINVVAAMSSGDVPLKAVQLLWVNLIMDTLGALALATEPPTDHL 916
Query: 700 MKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDL---ILNTL 756
M R+PVGR+ I+N+MWRN+L QS YQ ++ L G ++ L+ + + NT+
Sbjct: 917 MHRTPVGRREPLITNIMWRNLLVQSFYQVAVLLVLNFAGLSILGLNHENHAHAVEVKNTM 976
Query: 757 IFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTP 816
IFN FV CQ+FNE ++R+ +++NVF+G+ KN +FVA++ T + QIII+ LG FA+T
Sbjct: 977 IFNAFVMCQIFNEFNARKPDEMNVFRGVNKNPLFVAIVGVTFILQIIIVTFLGKFAHTVR 1036
Query: 817 LNLQQWFVSILLGFLGMPIAAVLKLIQV 844
L Q W SI++G + P+A V KLI V
Sbjct: 1037 LGWQLWLASIIIGLVSWPLAIVGKLIPV 1064
|
|
| TAIR|locus:2087363 AT3G63380 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1922 (681.6 bits), Expect = 1.6e-198, P = 1.6e-198
Identities = 407/859 (47%), Positives = 564/859 (65%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+T++IL VCA+ SL GI G +G ++G I +++ LV+ V+A S+++Q QF L +
Sbjct: 164 LTILILLVCAIFSLGFGIKEHGIKEGWYEGGSIFVAVFLVIVVSALSNFRQERQFDKLSK 223
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
I V+V R+ R+ ISI+D++ GD+V L +GDQ+PADGLF+ G S+ ++ESS+TGES
Sbjct: 224 ISNNIKVEVLRDSRRQHISIFDVVVGDVVFLKIGDQIPADGLFLEGHSLQVDESSMTGES 283
Query: 121 EPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 179
+ + V+ NPFL SGTK+ +G +MLV +VGM T WG+ M+++++ + TPLQV+L+
Sbjct: 284 DHLEVDHKDNPFLFSGTKIVDGFAQMLVVSVGMSTTWGQTMSSINQDSSERTPLQVRLDT 343
Query: 180 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD----DAL--EILEFFXXXXX 233
+ + IGKIGL A + V++ FT ++ ++G D + ++
Sbjct: 344 LTSTIGKIGLTVAALVLVVLLVRYFTGNTEKEGKREYNGSKTPVDTVVNSVVRIVAAAVT 403
Query: 234 XXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHM 293
PEGLPLAVTL+LA++MK+MM+D+A+VR L+ACETMGSAT IC+DKTGTLT N M
Sbjct: 404 IVVVAIPEGLPLAVTLTLAYSMKRMMSDQAMVRKLSACETMGSATVICTDKTGTLTLNEM 463
Query: 294 TVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKT-EILG 352
V K + +E D++K I LL Q NT G V + + T E G
Sbjct: 464 KVTKFWLGQESIHEDSTK-------MISPDVLDLLYQGTGLNTTGSVCVSDSGSTPEFSG 516
Query: 353 TPTETAILEFGLL-LGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGA 410
+PTE A+L + +L LG D ++ +Q ++++VE F+S KK+ GV++ + VH KGA
Sbjct: 517 SPTEKALLSWTVLNLGMDMESVKQKHEVLRVETFSSAKKRSGVLVRRKSDNTVHVHWKGA 576
Query: 411 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 470
+E++LA C + S G V ++ A + + I+ A+ +LR + A N D+
Sbjct: 577 AEMVLAMCSHYYTSTGSVDLMDSTAKSRIQAIIQGMAASSLRCIAFAHKIASN----DSV 632
Query: 471 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 530
+ +G T +GIVG+KDP RPGV ++V C+ AG+T++M+TGDN+ TAKAIA ECGIL N
Sbjct: 633 LEEDGLTLMGIVGLKDPCRPGVSKAVETCKLAGVTIKMITGDNVFTAKAIAFECGILDHN 692
Query: 531 G-----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGD 585
+EG +FR +DEE + + KI+VMARSSP DK +VK LR G VVAVTGD
Sbjct: 693 DKDEEDAVVEGVQFRNYTDEERMQKVDKIRVMARSSPSDKLLMVKCLRLK-GHVVAVTGD 751
Query: 586 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQ 645
GTNDAPAL EADIGL+MGI GTEVAKES+D++ILDDNF+++ TV KWGR VY NIQKF+Q
Sbjct: 752 GTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQKFIQ 811
Query: 646 FQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPV 705
FQLTVNV AL++NF +A G PLTAVQLLWVN+IMDTLGALALATE P +L+KR PV
Sbjct: 812 FQLTVNVAALVINFIAAISAGEVPLTAVQLLWVNLIMDTLGALALATERPTNELLKRKPV 871
Query: 706 GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQ 765
GR I+NVMWRN+L QSLYQ ++ LQ +G ++F + D TLIFNTFV CQ
Sbjct: 872 GRTEALITNVMWRNLLVQSLYQIAVLLILQFKGMSIFSVRKEVKD----TLIFNTFVLCQ 927
Query: 766 VFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVS 825
VFNE ++REMEK NVFKG+ +N +F+ ++ T++ Q+I++E L FA+T LN QW
Sbjct: 928 VFNEFNAREMEKKNVFKGLHRNRLFIGIIAITIVLQVIMVEFLKKFADTVRLNGWQWGTC 987
Query: 826 ILLGFLGMPIAAVLKLIQV 844
I L L PI K I V
Sbjct: 988 IALASLSWPIGFFTKFIPV 1006
|
|
| TAIR|locus:2084578 AT3G22910 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1850 (656.3 bits), Expect = 6.7e-191, P = 6.7e-191
Identities = 405/862 (46%), Positives = 560/862 (64%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+T++IL CA +SL GI G +G +DG I +++ LVV V+A S+++Q+ QF L +
Sbjct: 159 LTILILLGCATLSLGFGIKEHGLKEGWYDGGSIFVAVFLVVAVSAVSNFRQNRQFDKLSK 218
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
I + V RNG R++ISI+D++ GDIV L +GDQVPADG+FV G + ++ESS+TGES
Sbjct: 219 VSSNIKIDVVRNGRRQEISIFDIVVGDIVCLNIGDQVPADGVFVEGHLLHVDESSMTGES 278
Query: 121 EPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 179
+ V V+ N FL SGTK+ +G KM VT+VGM T WG++M+ +S +++TPLQ +L+
Sbjct: 279 DHVEVSLTGNTFLFSGTKIADGFGKMAVTSVGMNTAWGQMMSHISRDTNEQTPLQSRLDK 338
Query: 180 VATIIGKIGLFFAVVTFAVMVQGLFT--RKLQEGTHW----TWSGDDALE-ILEFFXXXX 232
+ + IGK+GL A + V++ FT K + G T D+ + +++
Sbjct: 339 LTSSIGKVGLLVAFLVLLVLLIRYFTGTTKDESGNREYNGKTTKSDEIVNAVVKMVAAAV 398
Query: 233 XXXXXXXPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNH 292
PEGLPLAVTL+LA++MK+MM D A+VR L+ACETMGSAT IC+DKTGTLT N
Sbjct: 399 TIIVVAIPEGLPLAVTLTLAYSMKRMMKDNAMVRKLSACETMGSATVICTDKTGTLTLNQ 458
Query: 293 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEIL 351
M V +++ K SS+ +L Q + NT G V + G + E
Sbjct: 459 MKVTDFWF-----GLESGKA-----SSVSQRVVELFHQGVAMNTTGSVFKAKAGTEYEFS 508
Query: 352 GTPTETAILEFGLL-LGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFR---VHC 407
G+PTE AIL + + L + + +V VE FNS KK+ GV+++ VH
Sbjct: 509 GSPTEKAILSWAVEELEMGMEKVIEEHDVVHVEGFNSEKKRSGVLMKKKGVNTENNVVHW 568
Query: 408 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSA 467
KGA+E ILA C F + +G V + E + I+ A+++LR + A E NE
Sbjct: 569 KGAAEKILAMCSTFCDGSGVVREMKEDDKIQFEKIIQSMAAKSLRCIAFAYSE-DNE--D 625
Query: 468 DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 527
+ + E + +GI+GIKDP RPGVK++V C+ AG+ ++M+TGDNI TA+AIA ECGIL
Sbjct: 626 NKKLKEEKLSLLGIIGIKDPCRPGVKKAVEDCQFAGVNIKMITGDNIFTARAIAVECGIL 685
Query: 528 TD----NGIAI-EGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 582
T N A+ EG +FR + EE + + +I+VMARSSP DK +VK L+ LG VVAV
Sbjct: 686 TPEDEMNSEAVLEGEKFRNYTQEERLEKVERIKVMARSSPFDKLLMVKCLKE-LGHVVAV 744
Query: 583 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 642
TGDGTNDAPAL EADIGL+MGI GTEVAKES+D++ILDDNF+++ TV KWGR VY NIQK
Sbjct: 745 TGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVYNNIQK 804
Query: 643 FVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKR 702
F+QFQLTVNV AL++NF +A G+ PLTAVQLLWVN+IMDTLGALALATE P DLMK+
Sbjct: 805 FIQFQLTVNVAALVINFVAAVSAGDVPLTAVQLLWVNLIMDTLGALALATEKPTNDLMKK 864
Query: 703 SPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFV 762
P+GR I+N+MWRN+L Q+ YQ ++ LQ RG+++F + + + NTLIFNTFV
Sbjct: 865 KPIGRVAPLITNIMWRNLLAQAFYQISVLLVLQFRGRSIFNVT----EKVKNTLIFNTFV 920
Query: 763 FCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQW 822
CQVFNE ++R +EK NVFKG+ KN +F+ ++ TV+ Q++++E L FA+T LNL QW
Sbjct: 921 LCQVFNEFNARSLEKKNVFKGLHKNRLFIGIIVVTVVLQVVMVEFLKRFADTERLNLGQW 980
Query: 823 FVSILLGFLGMPIAAVLKLIQV 844
V I + PI ++K + V
Sbjct: 981 GVCIAIAAASWPIGWLVKSVPV 1002
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| O34431 | ATCL_BACSU | 3, ., 6, ., 3, ., 8 | 0.3234 | 0.8650 | 0.8213 | yes | no |
| Q6ATV4 | ACA2_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7402 | 0.9964 | 0.8151 | no | no |
| Q2QMX9 | ACA1_ORYSJ | 3, ., 6, ., 3, ., 8 | 0.7973 | 0.9988 | 0.8274 | no | no |
| O81108 | ACA2_ARATH | 3, ., 6, ., 3, ., 8 | 0.8189 | 0.9964 | 0.8303 | no | no |
| P63687 | CTPF_MYCTU | 3, ., 6, ., 3, ., - | 0.3135 | 0.8674 | 0.8099 | yes | no |
| Q37145 | ACA1_ARATH | 3, ., 6, ., 3, ., 8 | 0.8364 | 0.9988 | 0.8274 | yes | no |
| O64806 | ACA7_ARATH | 3, ., 6, ., 3, ., 8 | 0.8130 | 0.9964 | 0.8295 | no | no |
| P37278 | ATCL_SYNE7 | 3, ., 6, ., 3, ., 8 | 0.3157 | 0.9325 | 0.8509 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XIV0616 | hypothetical protein (1020 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 845 | |||
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 1e-131 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-131 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 1e-117 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 6e-99 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 5e-63 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 2e-61 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-59 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-53 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-53 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-51 | |
| pfam00689 | 175 | pfam00689, Cation_ATPase_C, Cation transporting AT | 5e-44 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 3e-40 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 6e-30 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-29 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 9e-27 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 6e-26 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 7e-26 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-25 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-23 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 4e-23 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 3e-22 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 4e-22 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-21 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 2e-20 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 7e-20 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 1e-16 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 9e-16 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 1e-15 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 6e-14 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-11 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 2e-09 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 9e-08 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-07 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 4e-07 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 6e-05 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 8e-05 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 9e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 1e-04 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 3e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 3e-04 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 6e-04 | |
| COG4069 | 367 | COG4069, COG4069, Uncharacterized protein conserve | 0.003 | |
| TIGR01487 | 215 | TIGR01487, Pglycolate_arch, phosphoglycolate phosp | 0.004 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 1076 bits (2784), Expect = 0.0
Identities = 441/854 (51%), Positives = 596/854 (69%), Gaps = 20/854 (2%)
Query: 2 TLMILAVCALVSLVVGI-----ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFK 56
TL++L+V A+VSLV+G+ G +G+ I++S++LVV VTA +DYK+ LQF+
Sbjct: 99 TLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFR 158
Query: 57 DLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSL 116
L+REK + V R G ++ISI+D++ GDIV L GD VPADG+F+SG S+ I+ESS+
Sbjct: 159 QLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSI 218
Query: 117 TGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQV 175
TGES+P+ + +PFLLSGT V GS +MLVT VG+ + GKLM L + G+D TPLQ
Sbjct: 219 TGESDPIKKGPVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQAGEDSTPLQE 278
Query: 176 KLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 235
KL+ +A +IGK G+ AV+ F V+ R ++ T +DA L+ F IAVTIV
Sbjct: 279 KLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDT--EEDAQTFLDHFIIAVTIV 336
Query: 236 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 295
VVAVPEGLPLAVT++LA++MKKMM D LVRHLAACETMGSAT+ICSDKTGTLT N M+V
Sbjct: 337 VVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSV 396
Query: 296 LKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPT 355
++ I E+ V + ++P +L++ I N+ E V+ G K +G+ T
Sbjct: 397 VQGYIGEQRFNVRD------VLRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKT 450
Query: 356 ETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 415
E A+L+FGLLL D+Q R K+VK+ PFNS +K M VV++ G +R KGASEI+L
Sbjct: 451 ECALLDFGLLLLRDYQEVRAEEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVL 510
Query: 416 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEG 475
C K L+SNGE P+++ + + IE AS+ALRT+CLA + E P +G
Sbjct: 511 KPCRKRLDSNGEATPISDDDKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNKG 570
Query: 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIE 535
T IG+VGIKDP+RPGV+E+V C+ AGITVRMVTGDNI+TAKAIAR CGILT G+A+E
Sbjct: 571 LTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAME 630
Query: 536 GPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 595
G EFR EE+ ++PK++V+ARSSP+DK LV L+ +GEVVAVTGDGTNDAPAL
Sbjct: 631 GKEFRSLVYEEMDPILPKLRVLARSSPLDKQLLVLMLK-DMGEVVAVTGDGTNDAPALKL 689
Query: 596 ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL 655
AD+G +MGI+GTEVAKE++D+I+LDDNF++IV KWGR+VY NI+KF+QFQLTVNVVA+
Sbjct: 690 ADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAV 749
Query: 656 IVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNV 715
I+ F +C++ +PLTAVQLLWVN+IMDTL ALALATEPP L+ R P+GR IS
Sbjct: 750 ILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRS 809
Query: 716 MWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD-----PDLILNTLIFNTFVFCQVFNEI 770
MW+NILGQ+ YQ ++ + L G ++F + GPD LNT++FNTFV Q+FNEI
Sbjct: 810 MWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEI 869
Query: 771 SSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGF 830
++R++ + NVF+G+ KN +FV ++ T FQ+II+E G+F +T L+++QW +LLG
Sbjct: 870 NARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGM 929
Query: 831 LGMPIAAVLKLIQV 844
L + +L+LI V
Sbjct: 930 LSLIFGVLLRLIPV 943
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 593 bits (1532), Expect = 0.0
Identities = 301/860 (35%), Positives = 438/860 (50%), Gaps = 65/860 (7%)
Query: 3 LMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREK 62
+++L V AL+S VG W D + I++ +++ + +Y+ + L ++
Sbjct: 83 IILLLVAALLSAFVGD----WVDAGVDAIVILLVVVINALLGFVQEYRAEKALEAL-KKM 137
Query: 63 KKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEP 122
+V R+G +I +L+PGDIV L GD VPAD + + ++ES+LTGES P
Sbjct: 138 SSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLP 197
Query: 123 VNVNAL-------------NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 169
V AL + L SGT V +G K +V G T++GK+ L +
Sbjct: 198 VEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTKKEV 257
Query: 170 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 229
+TPLQ KLN + + + L + F V GLF G+ LE
Sbjct: 258 KTPLQRKLNKLGKFLLVLALVLGALVFVV---GLFRG-----------GNGLLESFLT-- 301
Query: 230 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 289
A+ + V AVPEGLP VT++LA ++M D A+VR L A ET+GS ICSDKTGTLT
Sbjct: 302 -ALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLT 360
Query: 290 TNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTE 349
N MTV K I K++D+ + + LL + N+ V E N
Sbjct: 361 QNKMTVKKIYINGGGKDIDDKDLKD------SPALLRFLLAAALCNS----VTPEKNGWY 410
Query: 350 ILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 407
G PTE A++EF LG D I+ PF+S +K+M V+++ EG + +
Sbjct: 411 QAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFV 470
Query: 408 KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIG-NEFS 466
KGA E+IL C S GE+ PL E + L E +++ ASE LR L +A ++ E
Sbjct: 471 KGAPEVILERCK----SIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKD 526
Query: 467 ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 526
+ +G+ GI+DP R VKE++ R AGI V M+TGD++ TA AIA+ECGI
Sbjct: 527 DEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGI 586
Query: 527 LTD--NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 584
+ + + I+G E SDEEL++L+ ++ V AR SP K +V+ L+ G VVA+TG
Sbjct: 587 EAEAESALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQK-SGHVVAMTG 645
Query: 585 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 644
DG NDAPAL AD+G+AMG GT+ AKE+AD+++LDDNF+TIV GR VY+NI+KF+
Sbjct: 646 DGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFI 705
Query: 645 QFQLTVNVVA-LIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRS 703
+ L+ NV L + S PLT +QLLW+N++ D+L ALAL E P D+MKR
Sbjct: 706 LYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKRP 765
Query: 704 PVGRKGNFISN-VMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLI---LNTLIFN 759
P G + + + WR IL L ++ F + DL L T F
Sbjct: 766 PRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFT 825
Query: 760 TFVFCQVFNEISSREMEKINVFK-GILKNYVFVAVLTCTVLFQIIIIELLGTFAN---TT 815
V Q+ ++ R + N L ++ Q++II L T
Sbjct: 826 VLVLIQLLLTLAVRSR-GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPT 884
Query: 816 PLNLQQWFVSILLGFLGMPI 835
PL+L +W ++I + L + I
Sbjct: 885 PLSLFEWLIAIAVALLLLYI 904
|
Length = 917 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 415 bits (1069), Expect = e-131
Identities = 278/935 (29%), Positives = 424/935 (45%), Gaps = 128/935 (13%)
Query: 5 ILAVCALVSLVVGIATEGWPKGAHDGLGIV--MSILLVVFVTATSDYKQSL-------QF 55
IL + A VS V+ EG V ILL++ A Q
Sbjct: 12 ILLLAACVSFVLAWFEEG----EETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEAL 67
Query: 56 KDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 115
K+ + E K V R+G I DL+PGDIV L +GD+VPAD +S ++ +++S
Sbjct: 68 KEYESEHAK----VLRDGRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSI 123
Query: 116 LTGESEPVNV--------NALNP----FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 163
LTGES VN A+N L SGT V G + +V GM T+ GK+ +
Sbjct: 124 LTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMSTEIGKIRDEM 183
Query: 164 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 223
++TPLQ KL+ ++ K+ ++ + + + L G
Sbjct: 184 RAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW--------IQG 235
Query: 224 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSD 283
+ +F IAV + V A+PEGLP +T LA +KM A+VR L + ET+G T ICSD
Sbjct: 236 AIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSD 295
Query: 284 KTGTLTTNHMTVLKACICE----EIKE--VDNSKGTPAFGS----SIPASASKLLL---- 329
KTGTLTTN M+V K + + E V + P G A L
Sbjct: 296 KTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELA 355
Query: 330 ---------QSIFNNTGGEVVIGEGNKTEILGTPTETAIL-------EFGLLLGGDFQAE 373
FN G E +G TE A+ G +
Sbjct: 356 TIAALCNDSSLDFNERKGVY--------EKVGEATEAALKVLVEKMGLPATKNGVSSKRR 407
Query: 374 RQ----------ASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLN 423
K+ +E F+ +K M V+ + P G ++ KGA E +L C LN
Sbjct: 408 PALGCNSVWNDKFKKLATLE-FSRDRKSMSVLCK-PSTGNKLFVKGAPEGVLERCTHILN 465
Query: 424 SNGEVVPLNEAAVNHLNETIEKFAS-EALRTLCLACMEIGNEFSADAPIPTEGY------ 476
+G VPL + N + I++ + +ALR L LA +I + D +
Sbjct: 466 GDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESD 525
Query: 477 -TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----G 531
T IG+VG+ DP RP V +++ CR+AGI V M+TGDN TA+AI R GI + +
Sbjct: 526 LTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTF 585
Query: 532 IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAP 591
+ G EF E + + +R P K LV+ L+ GE+VA+TGDG NDAP
Sbjct: 586 KSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE-QGEIVAMTGDGVNDAP 644
Query: 592 ALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVN 651
AL +ADIG+AMG +GTEVAKE++D+++ DDNF+TIV + GR++Y N+++F+++ ++ N
Sbjct: 645 ALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSN 703
Query: 652 VVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNF 711
+ ++ F +A L L VQLLWVN++ D L A AL PP+ D+M + P
Sbjct: 704 IGEVVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPL 763
Query: 712 ISNVMWRNILGQSLY-----QFLIIWYLQTRG-------KAVFRLDGPDPDLIL------ 753
I+ ++ L +Y +W+ D DPD +
Sbjct: 764 ITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQP 823
Query: 754 -NTLIFNTFVFCQVFNEISS----REMEKINVFKGILKNYVFVAV-LTCTVLFQIIIIEL 807
T+ + V ++FN +++ + + ++ + ++ A+ L+ + F I+ +
Sbjct: 824 ARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNK---WLIGAICLSMALHFLILYVPF 880
Query: 808 LGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842
L TPL+L W + + L + + VLK
Sbjct: 881 LSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFF 915
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 413 bits (1064), Expect = e-131
Identities = 261/837 (31%), Positives = 426/837 (50%), Gaps = 94/837 (11%)
Query: 3 LMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREK 62
+++L A++S+ +G D + I ++IL+VV V +Y+ + L++
Sbjct: 64 ILLLIASAVISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLV 115
Query: 63 KKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEP 122
+ R G + L+PGD+V L +GD+VPAD V + I+ES+LTGE+ P
Sbjct: 116 PP-ECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTP 174
Query: 123 VN-----VNALNPFLLS--------GTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 169
V+ + A L+ GT V+ G K +V G T++G + +
Sbjct: 175 VSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQAIEKP 234
Query: 170 ETPLQVKLNGVATIIGKIGLFFAVVTFAV----MVQGLFTRKLQEGTHWTWSGDDALEIL 225
+TPLQ ++ +G ++V+F V + G F +G W L
Sbjct: 235 KTPLQKSMD-------LLGKQLSLVSFGVIGVICLVGWF-----QGKDW----------L 272
Query: 226 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKT 285
E F I+V++ V A+PEGLP+ VT++LA + +M +A+VR L + ET+GS ICSDKT
Sbjct: 273 EMFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKT 332
Query: 286 GTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSI-----------PASASKLLLQSIFN 334
GTLT NHMTV K + + + N+ FG I A + L ++ N
Sbjct: 333 GTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCN 392
Query: 335 NTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGV 394
N +LG PT+ A++E + G R+ V PF+S +K M V
Sbjct: 393 NA-----KFRNEADTLLGNPTDVALIELLMKFG--LDDLRETYIRVAEVPFSSERKWMAV 445
Query: 395 VIELPEGGFR-VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRT 453
+ KGA E +L C + +G+ + L + + + E + AS LR
Sbjct: 446 KCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRV 505
Query: 454 LCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN 513
+ A + T +G+VGI DP RPGVKE+V + G+ + M+TGD+
Sbjct: 506 IAFASGPEKGQL-----------TFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDS 554
Query: 514 INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573
TA +IAR G+ + ++ G + D++LS+++PK+ V AR+SP K +VK L+
Sbjct: 555 QETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQ 614
Query: 574 TTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 633
G+VVA+TGDG NDAPAL ADIG+AMG GT+VAKE+AD+I+ DD+F+TI++ + G
Sbjct: 615 K-RGDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEG 673
Query: 634 RSVYINIQKFVQFQLTVNVVAL-IVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALAT 692
+ ++ NI+ F+ FQL+ +V AL ++ ++ N PL A+Q+LW+N++MD A +L
Sbjct: 674 KGIFNNIKNFITFQLSTSVAALSLIALATLMGFPN-PLNAMQILWINILMDGPPAQSLGV 732
Query: 693 EPPNGDLMKRSPVGRKGNFISNVMWRNILGQS---LYQFLIIWYLQTRGKAVFRLDGPDP 749
EP + D+M++ P R ++ + + IL + + L ++ + + + D
Sbjct: 733 EPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITARD---- 788
Query: 750 DLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFVAVLTCTVLFQIIII 805
T+ F FVF +FN ++ R K +VF+ G N +F + +++ Q+++I
Sbjct: 789 ----TTMTFTCFVFFDMFNALACRSQTK-SVFEIGFFSNRMFNYAVGGSIIGQLLVI 840
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 365 bits (940), Expect = e-117
Identities = 199/668 (29%), Positives = 303/668 (45%), Gaps = 140/668 (20%)
Query: 33 IVMSILLVVFVT-ATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHL 91
+++ +LLVV D +SL DR V RNG ++I DL+PGD+V +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLS----DRLVNTRPATVLRNG-WKEIPAKDLVPGDVVLV 60
Query: 92 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF---------LLSGTKVQNGS 142
G+ VPADG+ +SG S ++ES+LTGES PV AL + +GT V G+
Sbjct: 61 KSGETVPADGVLLSG-SCFVDESNLTGESNPVLKTALKETQSGTITGDLVFAGTYVFGGT 119
Query: 143 CKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQG 202
++VT G+ T G++ + G + TPLQ K + + I + L + + +
Sbjct: 120 LIVVVTPTGILTTVGRIAVVVKTGFETRTPLQSKRDRLENFIFILFLLLLALAVFLYLFI 179
Query: 203 LFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDK 262
D I + A+ ++V+ VP LP AVT++LA ++
Sbjct: 180 RGW--------------DPNSIFKALLRALIVLVIVVPPALPAAVTVALAVGDARLAKKG 225
Query: 263 ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPA 322
LVR+L A E +G +CSDKTGTLT N MT+ I + +
Sbjct: 226 ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDG-----GKEDNSSSL------ 274
Query: 323 SASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKV 382
V + N + G P E A+L+ L+G + KI+ V
Sbjct: 275 ------------------VACDNN--YLSGDPMEKALLKSAELVGKAD-KGNKEYKILDV 313
Query: 383 EPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 442
PF+SV K+M V++E P+G + KGA E IL C N+ E
Sbjct: 314 FPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERC------------------NNYEEK 355
Query: 443 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 502
+ A + LR L A + + +G++ +DP+RP KE++ ++A
Sbjct: 356 YLELARQGLRVLAFA----------SKELEDD-LEFLGLITFEDPLRPDAKETIEELKAA 404
Query: 503 GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562
GI V M+TGDN+ TAKAIA+E GI V AR SP
Sbjct: 405 GIKVVMITGDNVLTAKAIAKELGID----------------------------VFARVSP 436
Query: 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
K +V+ L+ G +VA+TGDG NDAPAL +AD+G+AMG AK +AD+++LDD+
Sbjct: 437 EQKLQIVEALQ-KKGHIVAMTGDGVNDAPALKKADVGIAMG------AKAAADIVLLDDD 489
Query: 623 FSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIM 682
S IV K GR ++ NI+ + + + N++ + + + +++
Sbjct: 490 LSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIV--------------IILLL 535
Query: 683 DTLGALAL 690
L ALAL
Sbjct: 536 PMLAALAL 543
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 330 bits (847), Expect = 6e-99
Identities = 240/762 (31%), Positives = 377/762 (49%), Gaps = 85/762 (11%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTAT-SDYKQSLQFKDLD 59
M L I A+ ++ + +TE P+ + LG+V+S VV +T S Y+++ K ++
Sbjct: 76 MLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLS--AVVIITGCFSYYQEAKSSKIME 133
Query: 60 REKKKITVQ--VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 117
K + Q V R+G + I+ ++ GD+V + GD++PAD +S ++ SSLT
Sbjct: 134 SFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLT 193
Query: 118 GESEP-------VNVNAL---NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG- 166
GESEP + N L N S V+ G+ + +V G RT G++ A+L+ G
Sbjct: 194 GESEPQTRSPEFTHENPLETRNIAFFSTNCVE-GTARGIVVNTGDRTVMGRI-ASLASGL 251
Query: 167 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 226
+ +TP+ +++ II + +F V F + L G W LE +
Sbjct: 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFIL--------SLILGYTW-------LEAVI 296
Query: 227 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTG 286
F + I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTG
Sbjct: 297 FL---IGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 353
Query: 287 TLTTNHMTVLKACICEEIKEVDNSKGTP--AFGSSIPASASKLLLQSIFNNTGGEVVIGE 344
TLT N MTV +I E D ++ +F S + + + N G+
Sbjct: 354 TLTQNRMTVAHMWFDNQIHEADTTEDQSGVSFDKSSATWLALSRIAGLCNR--AVFKAGQ 411
Query: 345 GN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE 400
N K + G +E+A+L+ L G R+ + V PFNS K + E +
Sbjct: 412 ENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENED 471
Query: 401 GGFRVHC---KGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 457
H KGA E IL C L +G+ PL+E + R L
Sbjct: 472 PRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFC 530
Query: 458 CMEI-------GNEFSADA-PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMV 509
+ + G +F D PT+ +G++ + DP R V ++V CRSAGI V MV
Sbjct: 531 HLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMV 590
Query: 510 TGDNINTAKAIARECGILTDNG-----IA-------------------IEGPEFREKSDE 545
TGD+ TAKAIA+ GI+++ IA + G + ++ + E
Sbjct: 591 TGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSE 650
Query: 546 ELSKLI---PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602
+L +++ +I V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AM
Sbjct: 651 QLDEILKYHTEI-VFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAM 708
Query: 603 GIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 662
GIAG++V+K++AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ +
Sbjct: 709 GIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFI 768
Query: 663 CLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSP 704
PL + +L +++ D + A++LA E D+MKR P
Sbjct: 769 IANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQP 810
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 227 bits (581), Expect = 5e-63
Identities = 176/633 (27%), Positives = 291/633 (45%), Gaps = 84/633 (13%)
Query: 72 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV-------- 123
NG ++ I L+PGD++ L GD +PAD +S + IN+S+LTGES PV
Sbjct: 138 NGSMDEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKR 197
Query: 124 ----NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 179
+ GT V +G + +V G T +G L +E T +
Sbjct: 198 ARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAATERRGQ-TAFDKGVKS 256
Query: 180 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 239
V+ ++ + L V M+ GL W LE F A+ + V
Sbjct: 257 VSKLLIRFMLVMVPVVL--MINGL--------MKGDW--------LEAFLFALAVAVGLT 298
Query: 240 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 299
PE LP+ V+ +LA M K +V+ L+A + G+ +C+DKTGTLT + +
Sbjct: 299 PEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKI------ 352
Query: 300 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN---TGGEVVIGEGNKTEILGTPTE 356
E K +D+S G + ++L + N+ TG + V+ +
Sbjct: 353 --ELEKHIDSS-GETS---------ERVLKMAWLNSYFQTGWKNVL-------------D 387
Query: 357 TAILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCKGASEI 413
A+L D A RQ AS+ KV+ PF+ ++++ VV+E R+ CKGA E
Sbjct: 388 HAVLAKL-----DESAARQTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEE 442
Query: 414 ILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI---GNEFSADAP 470
+L C G VV L+E+ + L + + + +R + +A + +F+
Sbjct: 443 MLTVCTH-KRFGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTK--- 498
Query: 471 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN 530
E G +G DP + KE++A GI V+++TGDN I +E GI D
Sbjct: 499 TDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGI--DA 556
Query: 531 GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA 590
+ G + E SDEEL++ + K + AR +PM K ++ L+ G V GDG NDA
Sbjct: 557 NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKA-GHTVGFLGDGINDA 615
Query: 591 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV 650
PAL +AD+G+++ A ++AKE++D+I+L+ + + GR+ + NI K+++ +
Sbjct: 616 PALRKADVGISVDTA-ADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASS 674
Query: 651 NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMD 683
N + ++ P+ ++ LL N++ D
Sbjct: 675 NFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD 707
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 221 bits (566), Expect = 2e-61
Identities = 176/669 (26%), Positives = 296/669 (44%), Gaps = 110/669 (16%)
Query: 12 VSLVVGIATEGWPKGAHDGLGIVMSILL---VVFV------TATSDYKQSLQFKDLDREK 62
+ ++ IA E W D + I+ +LL + F+ A KQSL K
Sbjct: 44 AAAIIAIALENWV----DFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPK------ 93
Query: 63 KKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEP 122
+V R+G ++I +L+PGD+V L +GD VPAD G + +++++LTGES P
Sbjct: 94 ----ARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLP 149
Query: 123 VNVNA-LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA 181
V + SG+ V+ G + +VT GM T +GK A + LQ
Sbjct: 150 VTKKTGDIAY--SGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQK------ 201
Query: 182 TIIGKIGLF---FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA 238
I+ KIGLF V + + LF + G+ E L+F A+ ++V
Sbjct: 202 -ILSKIGLFLIVLIGVLVLIELVVLFFGR----------GESFREGLQF---ALVLLVGG 247
Query: 239 VPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKA 298
+P +P +++++A ++ KA+V L A E + +CSDKTGTLT N +++ +
Sbjct: 248 IPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEI 307
Query: 299 CICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETA 358
+ D+ A S E +TA
Sbjct: 308 LPFFNGFDKDDVLLYAALASRE-----------------------EDQD------AIDTA 338
Query: 359 ILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC-KGASEIILAA 417
+ L D + R K+++ PF+ V K+ +E PE G R KGA ++IL
Sbjct: 339 V----LGSAKDLKEARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDL 394
Query: 418 CDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYT 477
CD + E + E +++ AS R L +A D +
Sbjct: 395 CD-------NKKEIEEK----VEEKVDELASRGYRALGVA--------RTDEE---GRWH 432
Query: 478 CIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIE 535
+G++ + DP R KE++ R G+ V+MVTGD++ AK AR G+ T+ +
Sbjct: 433 FLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLL 492
Query: 536 GPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 595
+ R+ L +++ A P K+ +V+ L+ G +V +TGDG NDAPAL +
Sbjct: 493 KGDNRDDLPSGLGEMVEDADGFAEVFPEHKYEIVEILQ-KRGHLVGMTGDGVNDAPALKK 551
Query: 596 ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL 655
AD+G+A+ A T+ A+ +AD+++ + S IV R ++ ++ +V +++ + +
Sbjct: 552 ADVGIAVAGA-TDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAET-IRI 609
Query: 656 IVNFSSACL 664
+ F L
Sbjct: 610 VFFFGLLIL 618
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 217 bits (554), Expect = 3e-59
Identities = 163/590 (27%), Positives = 275/590 (46%), Gaps = 79/590 (13%)
Query: 75 RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV-------NVNA 127
+I I L+PGDI+ L GD +PAD + + + ++SLTGES PV
Sbjct: 175 WLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEH 234
Query: 128 LNPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVAT 182
NP GT V +G+ + +V G T +G+L +SE + Q ++ V+
Sbjct: 235 SNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSW 294
Query: 183 IIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEG 242
++ + F V+ V++ +T+ G W E A+++ V PE
Sbjct: 295 LLIR---FMLVMAPVVLLINGYTK----GDWW-----------EAALFALSVAVGLTPEM 336
Query: 243 LPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICE 302
LP+ VT +LA K+ K +V+ L A + G+ +C+DKTGTLT + + VL
Sbjct: 337 LPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKI-VL------ 389
Query: 303 EIKEVDNSKGTPAFGSSIPASASKLLLQSIFNN----TGGEVVIGEGNKTEILGTPTETA 358
T G + S+ +L S + N TG L +TA
Sbjct: 390 -------ENHTDISGKT-----SERVLHSAWLNSHYQTG-------------LKNLLDTA 424
Query: 359 ILEFGLLLGGDFQAERQ-ASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCKGASEIIL 415
+LE G D ++ R AS+ K++ PF+ +++M VV+ ++ CKGA E IL
Sbjct: 425 VLE-----GVDEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEIL 479
Query: 416 AACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEG 475
C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 480 NVCSQ-VRHNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESD 538
Query: 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIE 535
G + DP + ++ +++G+TV+++TGD+ A + E G+ D G +
Sbjct: 539 LILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGL--DAGEVLI 596
Query: 536 GPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 595
G + SD+EL+ L + + AR +PM K +V L+ G VV GDG NDAPAL
Sbjct: 597 GSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGINDAPALRA 655
Query: 596 ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQ 645
ADIG+++ ++A+E+AD+I+L+ + + GR + N+ K+++
Sbjct: 656 ADIGISVD-GAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIK 704
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 201 bits (512), Expect = 1e-53
Identities = 180/652 (27%), Positives = 297/652 (45%), Gaps = 100/652 (15%)
Query: 68 QVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV---- 123
RR+I + +L+PGDIVHL GD +PAD + + I+++ LTGE+ PV
Sbjct: 157 HAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYD 216
Query: 124 ------------------NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSE 165
++ L GT V +G+ +V G RT +G L ++
Sbjct: 217 TLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIV- 275
Query: 166 GGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEIL 225
G +T +N V+ ++ I +V +++ G T W +AL
Sbjct: 276 GTRAQTAFDRGVNSVSWLL--IRFMLVMVPVVLLINGF--------TKGDWL--EAL--- 320
Query: 226 EFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKT 285
FA+AV V PE LP+ V+ +LA M K +V+ L A + G+ +C+DKT
Sbjct: 321 -LFALAVA--VGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKT 377
Query: 286 GTLTTN-----HMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEV 340
GTLT + H + E + ++ A+ +S S K L+
Sbjct: 378 GTLTQDRIILEHHLDVSGRKDERVLQL-------AWLNSFHQSGMKNLM----------- 419
Query: 341 VIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE 400
+ A++ F + K+ ++ PF+ V++++ VV+E +
Sbjct: 420 ---------------DQAVVAFAEGNP-EIVKPAGYRKVDEL-PFDFVRRRLSVVVEDAQ 462
Query: 401 GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460
G + CKGA E +LA + V PL+EA L E + ++ R L +A E
Sbjct: 463 GQHLLICKGAVEEMLAVATH-VRDGDTVRPLDEARRERLLALAEAYNADGFRVLLVATRE 521
Query: 461 IGNEFSADAPIPTE---GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN-INT 516
I + A T G + DP + ++A R G+ V+++TGDN I T
Sbjct: 522 IPGG-ESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVT 580
Query: 517 AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTL 576
AK I RE G+ + G + G E D L++ + + V A+ +P+ K ++K L+
Sbjct: 581 AK-ICREVGL--EPGEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQAN- 636
Query: 577 GEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT-VAKWGRS 635
G V GDG NDAPAL +AD+G+++ +G ++AKESAD+I+L+ + + V K GR
Sbjct: 637 GHTVGFLGDGINDAPALRDADVGISVD-SGADIAKESADIILLEKSLMVLEEGVIK-GRE 694
Query: 636 VYINIQKFVQFQLTV---NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDT 684
+ NI K++ + NV +++V +SA + P+ A+ LL N++ D
Sbjct: 695 TFGNIIKYLNMTASSNFGNVFSVLV--ASAFIPF-LPMLAIHLLLQNLMYDI 743
|
Length = 903 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 185 bits (471), Expect = 2e-53
Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 20/237 (8%)
Query: 37 ILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQ 96
+L+ + A +Y+ K L + V R+G +I +L+ GDIV L GD+
Sbjct: 6 VLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLKPGDR 65
Query: 97 VPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQW 156
VPADG + G S+ ++ES+LTGES PV + + +GT V +G K++VT G T+
Sbjct: 66 VPADGRIIEG-SLEVDESALTGESLPVEKSR-GDTVFAGTVVLSGELKVIVTATGEDTEL 123
Query: 157 GKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTW 216
GK+ + E +TPLQ L+ +A I+ I L A++ F + +
Sbjct: 124 GKIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFLI--------------WFFR 169
Query: 217 SGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACET 273
GD LE A+ ++V A PE LPLAV L+LA ++ LV++L+A ET
Sbjct: 170 GGD----FLEALLRALAVLVAACPEALPLAVPLALAVGAGRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 1e-51
Identities = 119/349 (34%), Positives = 178/349 (51%), Gaps = 31/349 (8%)
Query: 384 PFNSVKKQMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNE 441
PF+S K+M + E G + ++ KGA E I+ C +G ++ PL + +
Sbjct: 532 PFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIA 591
Query: 442 TIEKFASEALRTLCLACMEIGNEFSADAPIPTE---------GYTCIGIVGIKDPMRPGV 492
+E A+E LR L A + D + E +G++GI DP R
Sbjct: 592 NMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNES 651
Query: 493 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA----------IEGPEFREK 542
+V C AGI V M+TGD TAKAIA+E GI+ N I + G +F
Sbjct: 652 AGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL 711
Query: 543 SDEELSKLIPKIQVMARSSPMDKHTLVK--HLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
SDEE+ L V+AR +P K +++ H R A+TGDG ND+P+L A++G+
Sbjct: 712 SDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAF---CAMTGDGVNDSPSLKMANVGI 768
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNV---VALIV 657
AMGI G++VAK+++D+++ DDNF++I+ + GR ++ NI KFV L NV + LI+
Sbjct: 769 AMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLII 828
Query: 658 NFSSACLTGNA--PLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSP 704
+ G + PL+ V++LW MI A+ L E DLM R P
Sbjct: 829 GLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLP 877
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|216063 pfam00689, Cation_ATPase_C, Cation transporting ATPase, C-terminus | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 5e-44
Identities = 56/176 (31%), Positives = 91/176 (51%), Gaps = 5/176 (2%)
Query: 669 PLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQF 728
PLT +Q+LW+N++ D L ALAL EPP DLMKR P K S + R IL Q L
Sbjct: 3 PLTPIQILWINLVTDGLPALALGFEPPEPDLMKRPPRKPKEPLFSRKLLRRILLQGLLIA 62
Query: 729 LIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNY 788
++ + G + T+ FNT V Q+FN +++R + + G+ N
Sbjct: 63 IVTLLVFF---LGLLGFGISESGLAQTMAFNTLVLSQLFNALNARSLRRSLFKIGLFSNK 119
Query: 789 VFVAVLTCTVLFQIIIIEL--LGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842
+ + + ++L Q++II + L TTPL+L+QW + + L + + + + KL+
Sbjct: 120 LLLLAVLLSLLLQLLIIYVPGLQAVFGTTPLSLEQWLIVLGLALVVLLVVELRKLL 175
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. This family represents 5 transmembrane helices. Length = 175 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 160 bits (406), Expect = 3e-40
Identities = 202/930 (21%), Positives = 340/930 (36%), Gaps = 213/930 (22%)
Query: 33 IVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC 92
SI L V+ KQ + +D+ K +V V RNG I+ +L+PGDIV +
Sbjct: 203 SSTSISLSVY----QIRKQMQRLRDM--VHKPQSVIVIRNGKWVTIASDELVPGDIVSIP 256
Query: 93 MGDQ--VPADGLFVSGFSVLINESSLTGESEPVNVNAL-----------------NPFLL 133
++ +P D + +SG S ++NES LTGES PV + L
Sbjct: 257 RPEEKTMPCDSVLLSG-SCIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLF 315
Query: 134 SGTKV-------QNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGK 186
GTK+ + C +V G T G+L+ ++ P K +
Sbjct: 316 GGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP----KPRVFKFYKDSFKFIL 371
Query: 187 IGLFFAVVTFA-VMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 245
A++ F +++ + D + + ++ I+ + VP LP
Sbjct: 372 FLAVLALIGFIYTIIELI---------------KDGRPLGKIILRSLDIITIVVPPALPA 416
Query: 246 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 305
+++ + ++ ++ G C DKTGTLT + + + +
Sbjct: 417 ELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQ 476
Query: 306 EVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL 365
E K S P+ K L T + EG ++G P + + E
Sbjct: 477 EFL--KIVTEDSSLKPSITHKALA------TCHSLTKLEGK---LVGDPLDKKMFEA--- 522
Query: 366 LGGDFQAERQAS------------------KIVKVEPFNSVKKQMGVVIELPEGGFRV-H 406
G + + +++ I++ F+S ++M V++ +
Sbjct: 523 TGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAF 582
Query: 407 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN-EF 465
KGA E I + C E VP + E ++ + E R L LA E+
Sbjct: 583 VKGAPETIQSLCSP------ETVPSDYQ------EVLKSYTREGYRVLALAYKELPKLTL 630
Query: 466 SADAPIPTEGYTC----IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA 521
+ + +G + ++P++P KE + + A I M+TGDN TA +A
Sbjct: 631 QKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA 690
Query: 522 RECG-----------------------------------------------------ILT 528
RECG + +
Sbjct: 691 RECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLAS 750
Query: 529 DNGIAIEGPEFR---EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGD 585
+A+ G F S E L +L+ V AR +P K TLV+ L+ L V + GD
Sbjct: 751 RYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQ-KLDYTVGMCGD 809
Query: 586 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN-IQKF- 643
G ND AL +AD+G+++ A VA A + S + V + GR + Q F
Sbjct: 810 GANDCGALKQADVGISLSEAEASVA---APFTSKLASISCVPNVIREGRCALVTSFQMFK 866
Query: 644 -------VQFQLTVNVVALI-VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPP 695
+QF +V+++ LI N Q L +++++ AL ++ P
Sbjct: 867 YMALYSLIQF-YSVSILYLIGSNLGD-----------GQFLTIDLLLIFPVALLMSRNKP 914
Query: 696 NGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYL------QTRGKAVFRLDGPDP 749
L K P N S + ++L Q + L YL Q K +D +
Sbjct: 915 LKKLSKERP---PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVD-LEK 970
Query: 750 DLILNTLIFNTFVFC-QVFNEISSREMEKINVFKG------ILKNYVFV-AVLTCTVLFQ 801
+ N L NT +F F + + I KG I KN FV ++T L
Sbjct: 971 ENFPNLL--NTVLFFVSSFQYLIT----AIVNSKGPPFREPIYKNKPFVYLLITGLGLLL 1024
Query: 802 IIIIE---LLGTFANTTPLNLQQWFVSILL 828
+++++ LLG PL Q++ +L+
Sbjct: 1025 VLLLDPHPLLGKILQIVPLP-QEFRSKLLV 1053
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 126 bits (319), Expect = 6e-30
Identities = 62/180 (34%), Positives = 97/180 (53%), Gaps = 29/180 (16%)
Query: 479 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538
+G++ + D +RP KE++A ++ GI V M+TGDN TA+AIA+E GI
Sbjct: 529 VGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI------------ 576
Query: 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598
+V A P DK +V+ L+ G VA+ GDG NDAPAL AD+
Sbjct: 577 ---------------DEVRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADV 620
Query: 599 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVN 658
G+AMG +GT+VA E+ADV+++ D+ S + R+ I++ + + N +A+ +
Sbjct: 621 GIAMG-SGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLA 679
|
Length = 713 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 125 bits (315), Expect = 1e-29
Identities = 147/621 (23%), Positives = 260/621 (41%), Gaps = 116/621 (18%)
Query: 35 MSILLVVFVTATSDYKQSLQFKDLDREKKK-ITVQVARNGFRRKISIYDLLPGDIVHLCM 93
+++L F A ++ + Q L KK + +G K+ L GDIV +
Sbjct: 75 ITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEA 134
Query: 94 GDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTTVG 151
GD +P DG + G + ++ES++TGES PV + F + GT++ + + T
Sbjct: 135 GDVIPCDGEVIEGVAS-VDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTANP 193
Query: 152 MRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEG 211
T +++A + +TP ++ L ++ + L F +VT + +
Sbjct: 194 GETFLDRMIALVEGAQRRKTPNEIALT---ILLIALTLVFLLVTATLWPFAAY------- 243
Query: 212 THWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAAC 271
G +A+ + A+ V ++ + GL A+ ++ M +++ + A
Sbjct: 244 ------GGNAISVTVLVALLVCLIPTTI-GGLLSAIGIA---GMDRVLGFNVIATSGRAV 293
Query: 272 ETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQS 331
E G ++ DKTGT+T + S+ PA G A L S
Sbjct: 294 EACGDVDTLLLDKTGTITLGNRLA--------------SEFIPAQGVDEKTLADAAQLAS 339
Query: 332 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 391
+ ++T P +I+ LG + + S F + +
Sbjct: 340 LADDT-----------------PEGKSIVILAKQLG--IREDDVQSLHATFVEFTAQTRM 380
Query: 392 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEAL 451
G+ ++ R+ KGA + I + + +NG +P + L++ +++ A +
Sbjct: 381 SGINLD----NGRMIRKGAVDAI----KRHVEANGGHIPTD------LDQAVDQVARQGG 426
Query: 452 RTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTG 511
L + N G++ +KD ++ G+KE A R GI M+TG
Sbjct: 427 TPLVVC---EDNRI-------------YGVIYLKDIVKGGIKERFAQLRKMGIKTIMITG 470
Query: 512 DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 571
DN TA AIA E G+ D+ IA PE DK L++
Sbjct: 471 DNRLTAAAIAAEAGV--DDFIAEATPE-------------------------DKIALIRQ 503
Query: 572 LRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631
+ G++VA+TGDGTNDAPAL +AD+G+AM +GT+ AKE+A+++ LD + + ++ V
Sbjct: 504 EQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVVH 561
Query: 632 WGRSVYINIQKFVQFQLTVNV 652
G+ + I F + +V
Sbjct: 562 IGKQLLITRGALTTFSIANDV 582
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 9e-27
Identities = 65/181 (35%), Positives = 103/181 (56%), Gaps = 30/181 (16%)
Query: 479 IGIVGIKDPMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP 537
+G++ ++D +RP KE++A + R+ GI + M+TGDN + A+A+A E GI
Sbjct: 376 LGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID---------- 425
Query: 538 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597
+V A P DK +VK L+ G VVA+ GDG NDAPAL AD
Sbjct: 426 -----------------EVHAELLPEDKLAIVKELQEE-GGVVAMVGDGINDAPALAAAD 467
Query: 598 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 657
+G+AMG AG++VA E+AD+++L+D+ S++ T R I++ + + L N+VA+ +
Sbjct: 468 VGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526
Query: 658 N 658
Sbjct: 527 A 527
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 6e-26
Identities = 150/565 (26%), Positives = 239/565 (42%), Gaps = 125/565 (22%)
Query: 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQ 139
+L GDIV + G+ +P+DG + G ++ES++TGES PV + F + GT+V
Sbjct: 122 ELKKGDIVLVEAGEIIPSDGEVIEG-VASVDESAITGESAPVIRESGGDFSSVTGGTRVL 180
Query: 140 NGSCKMLVTTVGMRTQWGKLMATLSEGGDDE-TPLQVKLN---GVATIIGKIGLFFAVVT 195
+ K+ +T T + M L EG + + TP ++ L T+I AV T
Sbjct: 181 SDWLKIRITANPGETFLDR-MIALVEGAERQKTPNEIALTILLSGLTLI----FLLAVAT 235
Query: 196 FAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 255
+SG A + A+ V ++ + GL A+ ++ M
Sbjct: 236 LYPFAI--------------YSGGGAASVTVLVALLVCLIPTTI-GGLLSAIGIA---GM 277
Query: 256 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTT-NHMTVLKACICEEIKEVDNSKGTP 314
++ + A E G ++ DKTGT+T N S+ P
Sbjct: 278 DRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQA---------------SEFIP 322
Query: 315 AFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAER 374
G S A L S+ + T P +I+E LG + + +
Sbjct: 323 VPGVSEEELADAAQLASLADET-----------------PEGRSIVELAKKLGIELREDD 365
Query: 375 QASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEA 434
S V PF + + G ++LP G R KGA + I +++ G +P
Sbjct: 366 LQSHAEFV-PFTAQTRMSG--VDLPGG--REIRKGAVDAIR----RYVRERGGHIP---- 412
Query: 435 AVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT-EGYTCIGIVGIKDPMRPGVK 493
E L A E+ P+ E +G++ +KD ++PG+K
Sbjct: 413 --------------EDLDA---AVDEVSR--LGGTPLVVVENGRILGVIYLKDIVKPGIK 453
Query: 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPK 553
E A R GI M+TGDN TA AIA E G+ D+
Sbjct: 454 ERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV-----------------DD-------- 488
Query: 554 IQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES 613
+A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+G+AM +GT+ AKE+
Sbjct: 489 --FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEA 544
Query: 614 ADVIILDDNFSTIVTVAKWGRSVYI 638
A+++ LD N + ++ V + G+ + I
Sbjct: 545 ANMVDLDSNPTKLIEVVEIGKQLLI 569
|
Length = 681 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 114 bits (287), Expect = 7e-26
Identities = 139/621 (22%), Positives = 224/621 (36%), Gaps = 167/621 (26%)
Query: 258 MMNDK----ALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI------------- 300
M ++K A VR E +G I SDKTGTLT N M K I
Sbjct: 336 MYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIK 395
Query: 301 ------------CEEIKEVDNSKGTPAF--------GSSIPASASKLLLQS--------- 331
E V++ T + A +
Sbjct: 396 DGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVP 455
Query: 332 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDF--------------QAERQAS 377
FN+ G E + + +P E A+++ +G F E +
Sbjct: 456 EFNDDGPEEITYQAA------SPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEY 509
Query: 378 KIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVN 437
+I+ V FNS +K+M V++ P+G ++ CKGA +I K L+S G V NE
Sbjct: 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIF----KRLSSGGNQV--NEETKE 563
Query: 438 HLNETIEKFASEALRTLCLACMEIG-NEF---------------------SADAPIPTEG 475
HL E +ASE LRTLC+A E+ E+ A +
Sbjct: 564 HL----ENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKD 619
Query: 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---- 531
+G I+D ++ GV E++ + R AGI + ++TGD + TA I C +L+ N
Sbjct: 620 LILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIV 679
Query: 532 IAIEGPEFREKSDEELSK------------------------------LIPKIQVM---- 557
I + + + + L +++
Sbjct: 680 ITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQL 739
Query: 558 ---------ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 608
R SP K +V+ ++ + G+ GDG ND + EAD+G+ GI+G E
Sbjct: 740 ALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISGKE 797
Query: 609 --VAKESADVIILDDNFSTIVTVAKW-GRSVYINIQKFVQFQLTVNVVALIVNF---SSA 662
A ++D I F + + GR Y I K + + N++ I+ F
Sbjct: 798 GMQAVMASDFAI--GQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYN 855
Query: 663 CLTGNAPLTAVQLLWVNMIMDTLGALALAT--EPPNGDLMKRSP----VGRKGNFISNVM 716
+G ++ N+ L ++L + + L R P G+KG S
Sbjct: 856 GFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFS--- 912
Query: 717 WRNILG---QSLYQFLIIWYL 734
+ G +YQ L+I++
Sbjct: 913 TKTFWGWMLDGIYQSLVIFFF 933
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 5e-25
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 29/177 (16%)
Query: 479 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538
G++ + D ++P KE + + GI M+TGDN TAKA+A+E GI
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIEN---------- 455
Query: 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598
V A P DK L+K L+ G+VVA+ GDG NDAPAL +AD+
Sbjct: 456 -----------------VRAEVLPDDKAALIKKLQ-EKGKVVAMVGDGINDAPALAQADV 497
Query: 599 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVAL 655
G+A+G AGT+VA E+ADV++L ++ + + T R I++ + + NV+A+
Sbjct: 498 GIAIG-AGTDVAIEAADVVLLRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAI 553
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 2e-23
Identities = 63/199 (31%), Positives = 97/199 (48%), Gaps = 34/199 (17%)
Query: 479 IGIVGIKDPMRPGVKESVAICRSAGIT-VRMVTGDNINTAKAIARECGILTDNGIAIEGP 537
+G + + D RP E++A ++ GI V M+TGD A+ +ARE GI
Sbjct: 354 LGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------- 403
Query: 538 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597
+V A P DK +VK LR VA+ GDG NDAPAL AD
Sbjct: 404 -----------------EVHAELLPEDKLEIVKELREK-YGPVAMVGDGINDAPALAAAD 445
Query: 598 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 657
+G+AMG +G++VA E+ADV++L+D+ S + + R +++ V L + ++ +++
Sbjct: 446 VGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILL 505
Query: 658 NFSSACLTGNAPLTAVQLL 676
L G PL L
Sbjct: 506 A-----LFGVLPLWLAVLG 519
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 104 bits (263), Expect = 4e-23
Identities = 75/306 (24%), Positives = 127/306 (41%), Gaps = 43/306 (14%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTA-----------TSDY 49
TL+ LA + + + +P + + +L+
Sbjct: 150 DTLVALA--TIGAYAYSLYATLFP------VYFEEAAMLIFLFLLGRYLEARAKGRARRA 201
Query: 50 KQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSV 109
++L LD K TV V +G ++ + ++ GDIV + G+++P DG+ VSG S
Sbjct: 202 IRAL----LDLAPKTATV-VRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS- 255
Query: 110 LINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDD 169
++ES LTGES PV + +GT +GS + VT VG T +++ + E
Sbjct: 256 SVDESMLTGESLPVEKKP-GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSS 314
Query: 170 ETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFA 229
+ P+Q + VA+ + L A +TFA+ W G E
Sbjct: 315 KAPIQRLADRVASYFVPVVLVIAALTFAL---------------WPLFGGGDWE--TALY 357
Query: 230 IAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLT 289
A+ ++V+A P L LA ++ + + L++ A E + ++ DKTGTLT
Sbjct: 358 RALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLT 417
Query: 290 TNHMTV 295
V
Sbjct: 418 EGKPEV 423
|
Length = 713 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 3e-22
Identities = 82/338 (24%), Positives = 134/338 (39%), Gaps = 76/338 (22%)
Query: 6 LAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLV-VFVTATSDYKQSLQFKDLDREKKK 64
+ + +++ + A W +G G++ +I+ + + + +YK L +
Sbjct: 64 MCMVLIIAAAISFAMHDWIEG-----GVISAIIALNILIGFIQEYKAEKTMDSL-KNLAS 117
Query: 65 ITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVN 124
V RNG I +DL+PGDI L GD +PAD + + +E+ LTGES PV
Sbjct: 118 PMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVI 177
Query: 125 VNALNPF--------------LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGG--- 167
+A F S + V G K + + ++ G + A L G
Sbjct: 178 KDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGDGGLF 237
Query: 168 ----DDE----------------------------TPLQVKLNGVATIIGKIGLFFAVVT 195
D+ TPL KL+ +A I+ I + FA++
Sbjct: 238 QRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAII- 296
Query: 196 FAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM 255
VM F D + + +AI + I + +PE L +++++A
Sbjct: 297 --VMAAHKF---------------DVDKEVAIYAICLAISI--IPESLIAVLSITMAMGA 337
Query: 256 KKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHM 293
M +VR L A E +G+ ICSDKTGT+T M
Sbjct: 338 ANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKM 375
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 90.7 bits (226), Expect = 4e-22
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 332 IFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQ 391
N E N EI+G PTE+A+L F LG D + R V PFNS +K+
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLGIDVEELRARYPRVAEIPFNSERKR 60
Query: 392 MGVVIELP-EGGFRVHCKGASEIILAACDKF 421
M V +L + G+R+ KGA E IL C
Sbjct: 61 MSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 1e-21
Identities = 72/296 (24%), Positives = 129/296 (43%), Gaps = 34/296 (11%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVV-FVTATSDYKQSLQFKDLD 59
LM LA + + +G+ EG +++ + L+ + + + S L
Sbjct: 2 DLLMALA--TIAAYAMGLVLEGA---------LLLFLFLLGETLEERAKGRASDALSALL 50
Query: 60 REKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 119
+ +G ++ + +L GDIV + G+++P DG+ +SG S ++ES+LTGE
Sbjct: 51 ALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVISGES-EVDESALTGE 109
Query: 120 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 179
S PV + + +GT +GS + VT +G + +++ + E + P+Q +
Sbjct: 110 SMPVEKKEGDE-VFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEAQSSKAPIQRLADR 168
Query: 180 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 239
+A+ L A++TF V AL A+ ++VVA
Sbjct: 169 IASYYVPAVLAIALLTFVVW--------------LALGALGALYR------ALAVLVVAC 208
Query: 240 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 295
P L LA +++ A+ L++ A E + ++ DKTGTLTT TV
Sbjct: 209 PCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTV 264
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 96.4 bits (241), Expect = 2e-20
Identities = 57/143 (39%), Positives = 82/143 (57%), Gaps = 29/143 (20%)
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539
G++ +KD ++PG+KE A R GI M+TGDN TA AIA E G+
Sbjct: 438 GVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV------------- 484
Query: 540 REKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599
D+ L A ++P DK L++ + G +VA+TGDGTNDAPAL +AD+G
Sbjct: 485 ----DDFL----------AEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVG 529
Query: 600 LAMGIAGTEVAKESADVIILDDN 622
+AM +GT+ AKE+ +++ LD N
Sbjct: 530 VAMN-SGTQAAKEAGNMVDLDSN 551
|
Length = 679 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 7e-20
Identities = 74/298 (24%), Positives = 130/298 (43%), Gaps = 40/298 (13%)
Query: 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATS--DYKQSLQFKDLD 59
LM LA AL ++ +G EG ++LL++F + +Y + L
Sbjct: 3 LLMALA--ALGAVAIGEYLEG-------------ALLLLLFSIGETLEEYASGRARRALK 47
Query: 60 REKKKI--TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLT 117
+ T +V R G ++++ +L GD+V + G++VP DG+ +SG S ++ES+LT
Sbjct: 48 ALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLSGTST-VDESALT 106
Query: 118 GESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 177
GES PV + + +G +G ++VT + + K++ + E + Q +
Sbjct: 107 GESVPVEKAPGDE-VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFI 165
Query: 178 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVV 237
+ A + L A+ + V GL R W + A+ ++VV
Sbjct: 166 DRFARYYTPVVLAIALAIWLVP--GLLKR-------WPFW----------VYRALVLLVV 206
Query: 238 AVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 295
A P L ++ + A+ L++ AA E + ++ DKTGTLTT V
Sbjct: 207 ASPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKV 264
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 83.9 bits (208), Expect = 1e-16
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 72 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF 131
+G ++ + L PGDIV + G+++P DG + G S ++ES +TGES PV +P
Sbjct: 99 DGEIEEVPVELLQPGDIVRVLPGEKIPVDGTVIEGESE-VDESLVTGESLPVPKKVGDP- 156
Query: 132 LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 191
+++GT GS + T G T +++ + + + P+Q + VA + +
Sbjct: 157 VIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAI 216
Query: 192 AVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSL 251
A++TF + W G D + LE AVT++++A P L LA +
Sbjct: 217 ALITFVI---------------WLILGADFVFALEV---AVTVLIIACPCALGLATPTVI 258
Query: 252 AFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKA 298
A A + L++ A E + ++ DKTGTLT TV
Sbjct: 259 AVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDV 305
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 9e-16
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 43/219 (19%)
Query: 474 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 533
+G++ ++D +R +++++ ++ GI M+TGDN A AIA E GI
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGI------- 607
Query: 534 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 593
+FR A P DK V L +A+ GDG NDAPA+
Sbjct: 608 ----DFR-----------------AGLLPEDKVKAVTELNQH--APLAMVGDGINDAPAM 644
Query: 594 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVV 653
A IG+AMG +GT+VA E+AD + + + + + R+ + NI++ + L + +
Sbjct: 645 KAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAI 703
Query: 654 ALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALAT 692
L+ + +TG LW+ ++ D+ GA AL T
Sbjct: 704 FLVT--TLLGITG---------LWLAVLADS-GATALVT 730
|
Length = 741 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 80.9 bits (199), Expect = 1e-15
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 32/193 (16%)
Query: 463 NEFSADAPIP---TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 519
S P E +G++ +KD ++ G+ E R GI M TGDN TA
Sbjct: 414 KGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAAT 473
Query: 520 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEV 579
IA+E G+ + +A P DK +++ + G +
Sbjct: 474 IAKEAGV---------------------------DRFVAECKPEDKINVIREEQAK-GHI 505
Query: 580 VAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYIN 639
VA+TGDGTNDAPAL EA++GLAM +GT AKE+A++I LD N + ++ V G+ + +
Sbjct: 506 VAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMT 564
Query: 640 IQKFVQFQLTVNV 652
F + ++
Sbjct: 565 RGSLTTFSIANDI 577
|
Length = 673 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 75.5 bits (186), Expect = 6e-14
Identities = 48/131 (36%), Positives = 67/131 (51%), Gaps = 29/131 (22%)
Query: 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 543
I+DP+R ++ AG + M+TGDN TA AIA+E GI
Sbjct: 647 IRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGI----------------- 689
Query: 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603
+V+A P K +K L++ G VA+ GDG NDAPAL +AD+G+AMG
Sbjct: 690 ----------DEVIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG 738
Query: 604 IAGTEVAKESA 614
G++VA E+A
Sbjct: 739 -GGSDVAIETA 748
|
Length = 834 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 1e-11
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 369 DFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEV 428
D ERQ ++ + F+S +K+M V++ P+ +V KGA + + D+ LN N V
Sbjct: 595 DIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMN--V 652
Query: 429 VPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN----------EFSADAPIPTEGY-- 476
+ EA HL+ ++S LRTL + E+ + E ++ A I
Sbjct: 653 IRATEA---HLH----TYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLR 705
Query: 477 ----------TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI 526
T +G I+D ++ GV E++ R+AGI V ++TGD TA +I +
Sbjct: 706 KVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL 765
Query: 527 LTDN 530
LT+
Sbjct: 766 LTNK 769
|
Length = 1178 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 57.3 bits (138), Expect = 2e-09
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 479 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538
+G++ + DP+ PG +E++ + AGI + ++TGDN TA AIAR G+ A
Sbjct: 86 LGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYGL 145
Query: 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597
+ K PKI +A ++ L EV+ V GDG ND PA A
Sbjct: 146 VG------VGKPDPKIFELA----------LEELGVKPEEVLMV-GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 9e-08
Identities = 116/485 (23%), Positives = 185/485 (38%), Gaps = 77/485 (15%)
Query: 66 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 125
T +V + + + + D+ PG ++ L GD+VP DG G ++E+ LTGE P
Sbjct: 324 TARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQG-EAWLDEAMLTGEPIP-QQ 381
Query: 126 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 185
+ +GT VQ+GS + VG T +++ + + Q + +
Sbjct: 382 KGEGDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA-------QSSKPEIGQLAD 434
Query: 186 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 245
KI F V + L W + G A +I+ IA T++++A P L L
Sbjct: 435 KISAVFVPVVVVI--------ALVSAAIWYFFG-PAPQIVYTLVIATTVLIIACPCALGL 485
Query: 246 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIK 305
A +S+ + + LVR A + + ++ DKTGTLT V+ +
Sbjct: 486 ATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGVD 545
Query: 306 EVDNSKGTPAF--GSSIP---ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAIL 360
E + A GSS P A K ++ G + G G E G
Sbjct: 546 EAQALRLAAALEQGSSHPLARAILDKAGDMTLPQVNGFRTLRGLGVSGEAEGHA------ 599
Query: 361 EFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDK 420
LLLG Q +E + + +GA+ ++LA
Sbjct: 600 ---LLLGNQALLNEQQVDTKALEAEITAQAS----------------QGATPVLLAV--- 637
Query: 421 FLNSNGEVV-------PLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT 473
+G+ PL +V L ++ R L + N +A+A I
Sbjct: 638 ----DGKAAALLAIRDPLRSDSVAAL----QRLHKAGYR---LVMLTGDNPTTANA-IAK 685
Query: 474 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNG- 531
E I G+ + G E++ +S G V MV GD IN A A+A+ + GI G
Sbjct: 686 EAGIDEVIAGV---LPDGKAEAIKRLQSQGRQVAMV-GDGINDAPALAQADVGIAMGGGS 741
Query: 532 -IAIE 535
+AIE
Sbjct: 742 DVAIE 746
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 54.3 bits (130), Expect = 2e-07
Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 24/260 (9%)
Query: 33 IVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQ-VARNGFRRKISIYDLLPGDIVHL 91
++++++ F A ++ + Q L + + ++ + + ++G I DL G IV +
Sbjct: 72 LLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMIDASDLKKGHIVRV 131
Query: 92 CMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPF--LLSGTKVQNGSCKMLVTT 149
G+Q+P DG + G + ++ES++TGES PV + F ++ GT V + ++ +T+
Sbjct: 132 ATGEQIPNDGKVIKGLAT-VDESAITGESAPVIKESGGDFDNVIGGTSVASDWLEVEITS 190
Query: 150 VGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQ 209
+ K++ + +TP ++ L T++ + + F VV + F
Sbjct: 191 EPGHSFLDKMIGLVEGATRKKTPNEIAL---FTLLMTLTIIFLVVILTMYPLAKF----- 242
Query: 210 EGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLA 269
++ L I A+AV ++ + GL A+ ++ M ++ L +
Sbjct: 243 --LNFN------LSIAMLIALAVCLIPTTI-GGLLSAIGIA---GMDRVTQFNILAKSGR 290
Query: 270 ACETMGSATSICSDKTGTLT 289
+ ET G + DKTGT+T
Sbjct: 291 SVETCGDVNVLILDKTGTIT 310
|
Length = 673 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 4e-07
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 71 RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 123
R+G R +++I DL PGD++ + G ++PADG +S F+ +ES+LTGES PV
Sbjct: 249 RDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLSPFASF-DESALTGESIPV 300
|
Length = 741 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 6e-05
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 15/91 (16%)
Query: 545 EELSKLIPKIQVMARSSP---------MDK----HTLVKHLRTTLGEVVAVTGDGTNDAP 591
+EL +L + + S P + K L KHL L EV+A GDG ND
Sbjct: 158 KELKELFGSLITITSSGPGYLEIMPKGVSKGTALKALAKHLGIDLEEVIAF-GDGENDIE 216
Query: 592 ALHEADIGLAMGIAGTEVAKESADVIILDDN 622
L A +G+AMG A + K +AD + +N
Sbjct: 217 MLELAGLGVAMGNA-SPEVKAAADYVTGSNN 246
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 8e-05
Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
Query: 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 549
PGVKE++ + GI + + T + + E G+ I +E
Sbjct: 27 PGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLF 86
Query: 550 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL-HEADIGLAM 602
L + + +P +K L EV+ V GD ND +G+A+
Sbjct: 87 LGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMV-GDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 9e-05
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 568 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
L + L +L +V+A GDG ND L A G+AMG A E K AD + +N
Sbjct: 196 LAEALGISLEDVIAF-GDGMNDIEMLEAAGYGVAMGNA-DEELKALADYVTDSNN 248
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 45.2 bits (108), Expect = 1e-04
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 72 NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGF-SVLINESSLTGESEPV 123
G ++ +L GDIV + G+ +PADG + G SV +ES++TGES PV
Sbjct: 112 PGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVASV--DESAITGESAPV 162
|
Length = 679 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 3e-04
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDE 545
+ PG +E VA ++AG V +++G + IA GI D +A E E D
Sbjct: 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI--DYVVANE----LEIDDG 129
Query: 546 ELSKLIPKIQVMARSSPMDKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 601
+L+ + L + L E VA GD ND P L A + +A
Sbjct: 130 KLTGRVVGPICDGEGK---AKALRELAAELGIPLEETVAY-GDSANDLPMLEAAGLPIA 184
|
Length = 212 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 3e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 540 REKSDEELSKL--IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597
R+ S +L++ IP +V A + P K +++ L+ E V + G+G ND AL EAD
Sbjct: 55 RKGSLVQLAEFVGIPVERVFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREAD 113
Query: 598 IG-LAMGIAGT-EVAKESADVIILD 620
+G + G E +ADV++ +
Sbjct: 114 LGICTIQQEGVPERLLLTADVVLKE 138
|
Length = 152 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 6e-04
Identities = 24/51 (47%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 568 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVII 618
L K L L EV+A GD TND L A +G+AMG A E KE AD +
Sbjct: 197 LAKLLGIKLEEVIAF-GDSTNDIEMLEVAGLGVAMGNA-DEELKELADYVT 245
|
Length = 264 |
| >gnl|CDD|226555 COG4069, COG4069, Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Score = 40.5 bits (95), Expect = 0.003
Identities = 41/197 (20%), Positives = 66/197 (33%), Gaps = 36/197 (18%)
Query: 425 NGEVVPLNEAAVNHLNETIEKFASEALRTL--CLACMEIGNEFSADAPIPTEGYTCIGIV 482
+GE++P N AA H + E + R EI N+ I
Sbjct: 114 DGELIPWNRAARPHAEKLSELLGLKISRPPLPVRNNGEICNQ--------IGKRVVRRIS 165
Query: 483 GIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI--AIEGPEFR 540
GV I +V G I KA + E ++ +NG IEG +
Sbjct: 166 --------GVFPGENI---------LVNG--IVVGKATSSEVELVAENGFLTDIEGGRIK 206
Query: 541 EKSDEELSKLIP-----KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 595
E E+L ++ K + RS K + +V+ + +
Sbjct: 207 EHGIEKLHRVDLARAVVKTGALRRSPDEPKKVKSRKENAHAVKVILIDHAAERSYELIEG 266
Query: 596 ADIGLAMGIAGTEVAKE 612
A + + +G TEVA +
Sbjct: 267 AGLVVTVGDDTTEVAGD 283
|
Length = 367 |
| >gnl|CDD|213628 TIGR01487, Pglycolate_arch, phosphoglycolate phosphatase, TA0175-type | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.004
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 27/118 (22%)
Query: 504 ITVRMVTGDNINTAKAIARECGI-LTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562
V M G +++ + I +E G+ L +G AI
Sbjct: 108 SLVIMREGKDVDEVREIIKERGLNLVASGFAI----------------------HIMKKG 145
Query: 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 617
+DK V+ L+ LG E VA GD ND +A+ A + KE AD +
Sbjct: 146 VDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAVANA-DDQLKEIADYV 202
|
This group of Archaeal sequences, now known to be phosphoglycolate phosphatases, is most closely related to the sucrose-phosphate phosphatases from plants and cyanobacteria (TIGR01485). Together, these two models comprise a subfamily model (TIGR01482). TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Length = 215 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 845 | |||
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.87 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.86 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.85 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.59 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.58 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.54 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.52 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.51 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.51 | |
| PLN02887 | 580 | hydrolase family protein | 99.48 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.46 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.44 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.42 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.4 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.4 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.27 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.26 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.22 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.21 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.11 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.09 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.07 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.06 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.0 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.0 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.97 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.96 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.91 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.9 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.84 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.63 | |
| PRK08238 | 479 | hypothetical protein; Validated | 98.59 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.57 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.56 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.56 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.55 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.54 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.36 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.35 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.32 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 98.3 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.3 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.29 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.24 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 98.21 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.19 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.13 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.12 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.12 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 98.11 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.1 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.09 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.04 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.89 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.87 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.86 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.86 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.72 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.67 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.61 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 97.57 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.57 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.56 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.55 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.55 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.54 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.54 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.52 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.48 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 97.48 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 97.33 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 97.31 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.26 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 97.25 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 97.18 | |
| PLN02423 | 245 | phosphomannomutase | 97.17 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.16 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 97.14 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 97.13 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.12 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.11 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 97.07 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.05 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.05 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 96.97 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.88 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 96.88 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.85 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.81 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 96.77 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 96.76 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.76 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.74 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.74 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.73 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.7 | |
| PLN02940 | 382 | riboflavin kinase | 96.7 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.67 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 96.47 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 96.38 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 96.27 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.23 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 96.23 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.01 | |
| PLN03017 | 366 | trehalose-phosphatase | 95.92 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.89 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 95.86 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 95.73 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 95.73 | |
| PLN02811 | 220 | hydrolase | 95.72 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.68 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 95.56 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 95.52 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 95.51 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.51 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 95.45 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 95.16 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 95.16 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 95.09 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 95.07 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 95.04 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 95.0 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 94.87 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 94.63 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 94.57 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 94.56 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 94.25 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 94.11 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 93.99 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 93.96 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 93.67 | |
| PLN02151 | 354 | trehalose-phosphatase | 93.42 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 93.37 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 93.35 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 93.17 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 93.04 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 92.14 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 92.1 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 91.9 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 91.23 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 90.87 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 90.27 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 89.75 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 88.29 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 87.39 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 87.1 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 86.56 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 85.7 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 84.41 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 82.84 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 81.46 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 81.35 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 80.11 |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-156 Score=1270.71 Aligned_cols=838 Identities=62% Similarity=0.960 Sum_probs=790.0
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
.++||.+||++|+.+|+++++...+|+|+..|++++++++++++..||++++++++|++...+.++.|+|||+.++|+.-
T Consensus 157 TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~ 236 (1034)
T KOG0204|consen 157 TLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIY 236 (1034)
T ss_pred hHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEe
Confidence 57899999999999999999888899999999999999999999999999999999999888999999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccC-CCCeEEeccEEEeceEEEEEEEEeecchhhHHH
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA-LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLM 160 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~-~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~ 160 (845)
||+||||+.++.||.+||||++++|+++.+|||++||||++++|.. .++++++||++.+|+++++|+++|.+|++|+++
T Consensus 237 diVVGDIv~lk~GDqvPADGvli~gn~L~iDESSlTGESd~v~k~~~~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m 316 (1034)
T KOG0204|consen 237 DLVVGDIVQLKIGDQVPADGVLIQGNSLKIDESSLTGESDHVQKSLDKDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIM 316 (1034)
T ss_pred eeeeccEEEeecCCccccceEEEeccceeEecccccCCCcceeccCCCCCeEeecceeecCcceEEEEEeeecchHhhHH
Confidence 9999999999999999999999999999999999999999999986 789999999999999999999999999999999
Q ss_pred HhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCc--cccCCCChHHHHHHHHHHHHHHHhh
Q 003127 161 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTH--WTWSGDDALEILEFFAIAVTIVVVA 238 (845)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~l~~~ 238 (845)
..+.+...++||+|-++++++..+..+++.++.+++++++.+++......+.. +.|.......+.++|..++.+++++
T Consensus 317 ~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVA 396 (1034)
T KOG0204|consen 317 TLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVA 396 (1034)
T ss_pred HhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEE
Confidence 99999988889999999999999999999999999999999988766544433 3454445678899999999999999
Q ss_pred cCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCC
Q 003127 239 VPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGS 318 (845)
Q Consensus 239 ~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~ 318 (845)
+|+|||+++++++++++++|.+++.++|.++++|++|+.++||+|||||||+|+|+|++.|++++.++.+... ..
T Consensus 397 VPEGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~-----~~ 471 (1034)
T KOG0204|consen 397 VPEGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPK-----SS 471 (1034)
T ss_pred CCCCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcc-----cc
Confidence 9999999999999999999999999999999999999999999999999999999999999998877644322 15
Q ss_pred CCChhHHHHHHHHHHhcCCceEEecCCC--ceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEE
Q 003127 319 SIPASASKLLLQSIFNNTGGEVVIGEGN--KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVI 396 (845)
Q Consensus 319 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv 396 (845)
.+++...+++.+++..|++..+..++.+ ..++.|+|+|+||+.+..++|.+++..+.+.++++.+||+|.||+|++++
T Consensus 472 ~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~e~~v~kv~~FNS~kK~~gvvi 551 (1034)
T KOG0204|consen 472 NLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRPEEKVVKVYPFNSVKKRMGVVI 551 (1034)
T ss_pred cCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcchhheeEEeccCcccceeeEEE
Confidence 6788899999999999988888776555 67789999999999999999999999999999999999999999999999
Q ss_pred EcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCC----CCCC-CCC
Q 003127 397 ELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE----FSAD-API 471 (845)
Q Consensus 397 ~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~----~~~~-~~~ 471 (845)
+.++++.++|+|||+|.|+.+|+++++.+|+..+++++.++.+++.++.|+.+|+|++|+|||++... ++.+ ...
T Consensus 552 ~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~~~~ 631 (1034)
T KOG0204|consen 552 KLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDNEEL 631 (1034)
T ss_pred EcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCcccccc
Confidence 98877734999999999999999999999999999999999999999999999999999999996544 2222 246
Q ss_pred CCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhh
Q 003127 472 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSK 549 (845)
Q Consensus 472 ~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--~~i~g~~~~~~~~~~~~~ 549 (845)
.+.+++++|+++++||.||+++++|+.|+++||.|.|+||||..||+++|.+|||..+++ .+++|+++.++++++..+
T Consensus 632 ~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~ 711 (1034)
T KOG0204|consen 632 PEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDK 711 (1034)
T ss_pred CCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHh
Confidence 788999999999999999999999999999999999999999999999999999999887 899999999999999999
Q ss_pred hcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHH
Q 003127 550 LIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 550 ~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
..++.+|.+|.+|.+|..+|+.|++. |++|+++|||.||.|+|++||||.|||+.|+|+||++||++++||||.+++++
T Consensus 712 i~pkl~VlARSSP~DK~lLVk~L~~~-g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~ 790 (1034)
T KOG0204|consen 712 IWPKLRVLARSSPNDKHLLVKGLIKQ-GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKA 790 (1034)
T ss_pred hhhhheeeecCCCchHHHHHHHHHhc-CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHH
Confidence 99999999999999999999999988 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCC
Q 003127 630 AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKG 709 (845)
Q Consensus 630 i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~ 709 (845)
+++||+.|.||+|+++|+++-|++++++.|..++..+.+|+++.|+||.|+++|.+.+++||+|||.+++|+|+|..|++
T Consensus 791 v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALALATepPt~~Lm~RkP~GR~~ 870 (1034)
T KOG0204|consen 791 VKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALALATEPPTDELMKRKPVGRTK 870 (1034)
T ss_pred HHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHhccCCCChHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC--ccchhhhHHHHHHHHHHHhcccccccccccccccCCchh
Q 003127 710 NFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPD--PDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKN 787 (845)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n 787 (845)
+++++.||+++++|++||..+++.+.|.+...|+.+++. +.....|++|++||++|+||.++.|+.++.|+|+++++|
T Consensus 871 ~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N 950 (1034)
T KOG0204|consen 871 PLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRN 950 (1034)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcC
Confidence 999999999999999999999999999999888766653 355778999999999999999999998888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhccCC
Q 003127 788 YVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQVG 845 (845)
Q Consensus 788 ~~~~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~~~ 845 (845)
++|+..+..++++|++++.|.+.+|.++|++|.+|++|+.++++.|++..+.|.+|++
T Consensus 951 ~~F~~ii~~T~v~QviIveF~g~~~st~~L~~~qWl~ci~~g~~sl~~g~~ik~iP~~ 1008 (1034)
T KOG0204|consen 951 RLFCVIITITVVSQVIIVEFGGAFFSTTPLSLTQWLWCIFIGVLSLPWGQLLKCIPVS 1008 (1034)
T ss_pred ceEEEEeeeeeehhhhhhhhcCcceeeecccHHHHHHHHHHHHHHHHHHHHheecccc
Confidence 9999999999999999999999999999999999999999999999999999999975
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-139 Score=1144.96 Aligned_cols=823 Identities=33% Similarity=0.516 Sum_probs=709.9
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
++.+|+++|++||+++ .|.|+++|.+.+++++.+..++||+.++.++.|++ +.+..++|+|+|+.+.++++
T Consensus 61 Li~iLL~sA~ISfvl~--------~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~-l~p~~~~V~R~gk~~~i~A~ 131 (972)
T KOG0202|consen 61 LILILLLSAAISFVLA--------DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKE-LVPPMAHVLRSGKLQHILAR 131 (972)
T ss_pred HHHHHHHHHHHHHHHH--------hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHh-cCCccceEEecCcccceehh
Confidence 5789999999999998 47789999999999999999999999999999986 45678999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCccccc-------------CCCCeEEeccEEEeceEEEEEE
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVT 148 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~-------------~~~~~v~~Gt~v~~g~~~~~V~ 148 (845)
+|||||||.++.||+||||.|+++..++.||||.|||||.|+.|. ++.|++|+||.|..|+++|+|+
T Consensus 132 eLVPGDiV~l~vGDkVPADlRl~e~~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi 211 (972)
T KOG0202|consen 132 ELVPGDIVELKVGDKIPADLRLIEAKSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVI 211 (972)
T ss_pred ccCCCCEEEEecCCccccceeEEeeeeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEE
Confidence 999999999999999999999999999999999999999999993 2456899999999999999999
Q ss_pred EEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHH
Q 003127 149 TVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 228 (845)
Q Consensus 149 ~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (845)
.||.+|++|++...+++.++.+||||++++.+.+.+..++.++++.+.++-+ +++.... .-+..+....++|
T Consensus 212 ~TG~nTeiG~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~ni-g~f~~p~-------~~g~~fk~~~~~f 283 (972)
T KOG0202|consen 212 GTGLNTEIGKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNI-GHFLDPV-------HGGSWFKGALYYF 283 (972)
T ss_pred eccccchHHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhh-hhhcccc-------ccccchhchhhhh
Confidence 9999999999999999999889999999999999998665555554444311 1111000 0111223577899
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEec
Q 003127 229 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD 308 (845)
Q Consensus 229 ~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~ 308 (845)
..++++.++++|+|||+.++++++.|.+||+|++++||++.++|+||.+++||+|||||||+|+|++.++++.+......
T Consensus 284 ~IaVsLAVAAIPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~ 363 (972)
T KOG0202|consen 284 KIAVSLAVAAIPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV 363 (972)
T ss_pred hHHHHHHHHhccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876543211
Q ss_pred ------CCCCCCC----------CCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHH
Q 003127 309 ------NSKGTPA----------FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA 372 (845)
Q Consensus 309 ------~~~~~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~ 372 (845)
+....+. .....+.+.+..+......||++.+..++.+.+...|.|+|.||..++.+.+..-..
T Consensus 364 ~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~ 443 (972)
T KOG0202|consen 364 DEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTR 443 (972)
T ss_pred cccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcch
Confidence 1111111 011223345566677777888887776655555669999999999999999876322
Q ss_pred ---------------hhhhcceEEEecCCCCCceEEEEEEcCCC--eEEEEEeCcHHHHHHhchhccccCC-ceecCCHH
Q 003127 373 ---------------ERQASKIVKVEPFNSVKKQMGVVIELPEG--GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEA 434 (845)
Q Consensus 373 ---------------~~~~~~~l~~~~F~s~~k~~sviv~~~~~--~~~~~~kGa~~~il~~~~~~~~~~~-~~~~~~~~ 434 (845)
..+.++..+++||+|+||+|++.+..+.+ ++.+|+|||+|.|+++|+.++..+| ...|+++.
T Consensus 444 ~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 444 STNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred hhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 22345666999999999999999986554 4899999999999999988877666 55899999
Q ss_pred HHHHHHHHHHHHHHhhchhhhheeeecCCC--------CCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEE
Q 003127 435 AVNHLNETIEKFASEALRTLCLACMEIGNE--------FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV 506 (845)
Q Consensus 435 ~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~--------~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v 506 (845)
.|+.+.+...+++++|+|||++|+++.+.. ....+...|.|++|+|++++.||+|++++++|+.|+++||+|
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV 603 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRV 603 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEE
Confidence 999999999999999999999999977741 123456789999999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEE
Q 003127 507 RMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAV 582 (845)
Q Consensus 507 ~~~TGd~~~ta~~ia~~lgi~~~~~----~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~ 582 (845)
+|+|||+..||.++|+++|+...+. .+++|.+++.++++++.+......+|+|++|.+|.++|+.||++ |+.|+|
T Consensus 604 ~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~-geivAM 682 (972)
T KOG0202|consen 604 IMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSR-GEVVAM 682 (972)
T ss_pred EEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhc-CCEEEe
Confidence 9999999999999999999988776 78999999999999999999999999999999999999999999 999999
Q ss_pred EcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 583 TGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSA 662 (845)
Q Consensus 583 ~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~ 662 (845)
+|||.||+|+||.||+|||||.+|+|++|+|||+|+.||||++|+.+++|||.+|+|+++|+.|+++.|+..+...++.+
T Consensus 683 TGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~a 762 (972)
T KOG0202|consen 683 TGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTA 762 (972)
T ss_pred cCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHH---HHHHhc-
Q 003127 663 CLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIW---YLQTRG- 738 (845)
Q Consensus 663 ~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~- 738 (845)
.+..+.|++|+|+||+|+++|.+|+-+|+.+|++.|+|++|||++++.+++.+.++.++..+++...... ...+.+
T Consensus 763 a~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~ 842 (972)
T KOG0202|consen 763 AFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGA 842 (972)
T ss_pred HhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcC
Confidence 9999999999999999999999999999999999999999999999999999999998887766533221 111111
Q ss_pred ccc--------cc--------CCCC-CccchhhhHHHHHHHHHHHhccccccccccccccc-CCchhHHHHHHHHHHHHH
Q 003127 739 KAV--------FR--------LDGP-DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFVAVLTCTVLF 800 (845)
Q Consensus 739 ~~~--------~~--------~~~~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~ 800 (845)
... |. .++. ....-..|++|..+++..+||.+++++- ..++|. ++|+|+||..++.+++++
T Consensus 843 ~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se-~~slf~~~~~~N~~l~~ai~~S~~~ 921 (972)
T KOG0202|consen 843 DGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSE-NKSLFTMPPWSNRWLLWAIALSFVL 921 (972)
T ss_pred CCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccC-CcceEEecccccHHHHHHHHHHHHh
Confidence 000 00 0000 0011235899999999999999999964 445665 889999999999999999
Q ss_pred HH--HHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 801 QI--IIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 801 ~~--~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
|+ +|+|+++..|+++|+++..|++++.+++.+++++|++|++.
T Consensus 922 ~f~ilYvp~l~~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~ 966 (972)
T KOG0202|consen 922 HFLVLYVPPLQRIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIA 966 (972)
T ss_pred hheEEEechhhhhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 85 56899999999999999999999999999999999999874
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-130 Score=1185.01 Aligned_cols=832 Identities=53% Similarity=0.840 Sum_probs=725.1
Q ss_pred hHHHHHHHHHHHHHHhhcc-----cCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEE
Q 003127 2 TLMILAVCALVSLVVGIAT-----EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 76 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~-----~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~ 76 (845)
+.++|++++++|+++|+.. .++..+|.+++.++++++++++++++++++++++++++++..++.+++|+|||+++
T Consensus 98 ~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~ 177 (941)
T TIGR01517 98 TLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQ 177 (941)
T ss_pred HHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEE
Confidence 4678999999999988542 34455899999999999999999999999999999999876667799999999999
Q ss_pred EEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC-CCeEEeccEEEeceEEEEEEEEeecch
Q 003127 77 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-NPFLLSGTKVQNGSCKMLVTTVGMRTQ 155 (845)
Q Consensus 77 ~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~-~~~v~~Gt~v~~g~~~~~V~~tG~~T~ 155 (845)
+|+++||+|||+|.+++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.+.+|+++++|++||.+|+
T Consensus 178 ~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~~l~VdES~LTGES~pv~K~~~~~n~v~~GT~v~~G~~~~iV~~tG~~T~ 257 (941)
T TIGR01517 178 QISIHDIVVGDIVSLSTGDVVPADGVFISGLSLEIDESSITGESDPIKKGAPKDSFLLSGTVVNEGSGRMLVTAVGVNSF 257 (941)
T ss_pred EEeHHHCCCCCEEEECCCCEecccEEEEEcCcEEEEecccCCCCCcccccCCCCceEEeCCeEEeeEEEEEEEEeCCCcH
Confidence 9999999999999999999999999999997799999999999999999754 468999999999999999999999999
Q ss_pred hhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHH
Q 003127 156 WGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIV 235 (845)
Q Consensus 156 ~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l 235 (845)
+||+.+.+.+.+ +++|++++++++.+.+.++++.++++++++++..+.......+.. ........+...+..+++++
T Consensus 258 ~gki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~al~ll 334 (941)
T TIGR01517 258 GGKLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGR--DTEEDAQTFLDHFIIAVTIV 334 (941)
T ss_pred HHHHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccc--ccchhhHHHHHHHHHHHHHH
Confidence 999999888765 458999999999999999888888777776554332221111100 00001125677888999999
Q ss_pred HhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCC
Q 003127 236 VVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPA 315 (845)
Q Consensus 236 ~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~ 315 (845)
+++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|++.+++..+..++.++.
T Consensus 335 v~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~----- 409 (941)
T TIGR01517 335 VVAVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDV----- 409 (941)
T ss_pred HhhCCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcc-----
Confidence 999999999999999999999999999999999999999999999999999999999999999876654432211
Q ss_pred CCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEE
Q 003127 316 FGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVV 395 (845)
Q Consensus 316 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~svi 395 (845)
....++...+.+..++.+|+......++.+..+..|||+|.|+++++.+.+.+....+..+++++.+||+|+||+|+++
T Consensus 410 -~~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~~~~~~~pF~s~~k~msvv 488 (941)
T TIGR01517 410 -LRNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEEKVVKIYPFNSERKFMSVV 488 (941)
T ss_pred -cccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhchhccccccCCCCCeEEEE
Confidence 0112233445555666666544322222333456899999999999998887776666678888999999999999999
Q ss_pred EEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCc
Q 003127 396 IELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEG 475 (845)
Q Consensus 396 v~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~ 475 (845)
++.+++++++++|||||.++++|+.+.+.+|...++++ .++.+.+..++++++|+|++++|||+++.+.....+..|+|
T Consensus 489 ~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~~~~e~~ 567 (941)
T TIGR01517 489 VKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYPNGG 567 (941)
T ss_pred EEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHHHhcCCEEEEEEEEecCccccccccccccC
Confidence 99877779999999999999999987766787778877 77889999999999999999999999875433233345789
Q ss_pred eEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 476 ~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
++|+|+++++||+|++++++|++||++|++++|+|||++.||.++|+++|+..++..+++|++++.+.++++.+.+.+..
T Consensus 568 l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~ 647 (941)
T TIGR01517 568 LTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLR 647 (941)
T ss_pred cEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCe
Confidence 99999999999999999999999999999999999999999999999999998888999999999999999999999999
Q ss_pred EEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHH
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRS 635 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~ 635 (845)
+|+|++|+||.++|+.+|++ |++|+|+|||.||+|||++||||||||.+|+|.||++||+++.+|++..+.+++++||+
T Consensus 648 Vfar~sPe~K~~iV~~lq~~-g~vVam~GDGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~ 726 (941)
T TIGR01517 648 VLARSSPLDKQLLVLMLKDM-GEVVAVTGDGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRN 726 (941)
T ss_pred EEEECCHHHHHHHHHHHHHC-CCEEEEECCCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHH
Confidence 99999999999999999998 99999999999999999999999999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHH
Q 003127 636 VYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNV 715 (845)
Q Consensus 636 ~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~ 715 (845)
+|+|+++++.|.+++|+..+++.+++.++.+++|++++|++|+|+++|.+|+++++.++|++++|++||++++++++++.
T Consensus 727 ~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~l~~e~~~~~lm~~~P~~~~~~li~~~ 806 (941)
T TIGR01517 727 VYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALALATEPPTEALLDRKPIGRNAPLISRS 806 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHHHccCCccHHHHhCCCCCCCCCcCCHH
Confidence 99999999999999999999999998888899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCCC-----CccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHH
Q 003127 716 MWRNILGQSLYQFLIIWYLQTRGKAVFRLDGP-----DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVF 790 (845)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~ 790 (845)
+|.+++.++++++++.+++++.+..+++..+. ......+|++|.+++++|++|.+++|+.+..++|+++++|+++
T Consensus 807 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~ 886 (941)
T TIGR01517 807 MWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIF 886 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHH
Confidence 99999999999988777766554444432221 1224578999999999999999999965444788888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhccC
Q 003127 791 VAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQV 844 (845)
Q Consensus 791 ~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~~ 844 (845)
+.++++++++|++++++++.+|++.|+++.+|+++++++++.+++.|+.|++|.
T Consensus 887 ~~~~~~~~~l~~~~~~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~~~~~~ 940 (941)
T TIGR01517 887 VTIMGFTFGFQVIIVEFGGSFFSTVSLSIEQWIGCVLLGMLSLIFGVLLRLIPV 940 (941)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999984
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-126 Score=1151.85 Aligned_cols=810 Identities=28% Similarity=0.402 Sum_probs=682.0
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
++++|++||++|++++ .|.++..+++.+++..+++.+++++.++..+++++. .+.+++|+|||++++|+++
T Consensus 64 ~~~iL~~aails~~~~--------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l-~~~~~~ViRdg~~~~I~a~ 134 (1053)
T TIGR01523 64 MCMVLIIAAAISFAMH--------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNL-ASPMAHVIRNGKSDAIDSH 134 (1053)
T ss_pred HHHHHHHHHHHHHHHh--------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCceEEEeCCeeeecCHh
Confidence 5688999999999997 699999999999999999999999999999999875 4568999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccC--------------CCCeEEeccEEEeceEEEEE
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA--------------LNPFLLSGTKVQNGSCKMLV 147 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~--------------~~~~v~~Gt~v~~g~~~~~V 147 (845)
||||||||.+++||+|||||+|++++++.||||+|||||.|+.|.. ..|++|+||.|++|+++++|
T Consensus 135 eLVpGDIv~L~~Gd~VPAD~rLi~~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vV 214 (1053)
T TIGR01523 135 DLVPGDICLLKTGDTIPADLRLIETKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGIC 214 (1053)
T ss_pred hCCCCCEEEECCCCEeeccEEEEEeCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEE
Confidence 9999999999999999999999999889999999999999999952 13679999999999999999
Q ss_pred EEEeecchhhHHHHhhccCCC-----------------------------------CCChhHHHHHHHHHHHHHHHHHHH
Q 003127 148 TTVGMRTQWGKLMATLSEGGD-----------------------------------DETPLQVKLNGVATIIGKIGLFFA 192 (845)
Q Consensus 148 ~~tG~~T~~g~i~~~~~~~~~-----------------------------------~~~~l~~~~~~~~~~~~~~~~~~~ 192 (845)
++||.+|++||+.+.+.+.+. .+||+|++++++++++..++++++
T Consensus 215 vatG~~T~~GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~ 294 (1053)
T TIGR01523 215 IATALNSEIGAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFA 294 (1053)
T ss_pred EEecCccHHHHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998854321 249999999999998888777776
Q ss_pred HHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhh
Q 003127 193 VVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACE 272 (845)
Q Consensus 193 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e 272 (845)
++++++.... .+...+.++++++++++|++||+.++++++.++++|+++|+++|+++++|
T Consensus 295 ~~~~~~~~~~--------------------~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avE 354 (1053)
T TIGR01523 295 IIVMAAHKFD--------------------VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALE 354 (1053)
T ss_pred HHHHHHHhhh--------------------hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhh
Confidence 6665531100 12345667889999999999999999999999999999999999999999
Q ss_pred hccCcEEEEeccCCccCCCCeEEEEEEEcC-eeEEecCC--CCCCC------------------------C--------C
Q 003127 273 TMGSATSICSDKTGTLTTNHMTVLKACICE-EIKEVDNS--KGTPA------------------------F--------G 317 (845)
Q Consensus 273 ~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~-~~~~~~~~--~~~~~------------------------~--------~ 317 (845)
+||++++||+|||||||+|+|+|++++..+ ..+..++. ...+. . .
T Consensus 355 tLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (1053)
T TIGR01523 355 ALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELK 434 (1053)
T ss_pred hccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccccccccccccccccc
Confidence 999999999999999999999999998765 22322211 00000 0 0
Q ss_pred -CC----CChhHHHHHHHHHHhcCCceEEec-CCCceEEcCCchHHHHHHHHHHcCCChH------Hh------------
Q 003127 318 -SS----IPASASKLLLQSIFNNTGGEVVIG-EGNKTEILGTPTETAILEFGLLLGGDFQ------AE------------ 373 (845)
Q Consensus 318 -~~----~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~p~e~al~~~~~~~~~~~~------~~------------ 373 (845)
.. ..+.....+..+..+||.+....+ +++.+...|||+|.||++++.+.|++.. ..
T Consensus 435 ~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1053)
T TIGR01523 435 EIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLS 514 (1053)
T ss_pred ccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccc
Confidence 00 011123335555666777665433 2233455799999999999998886421 11
Q ss_pred -------hhhcceEEEecCCCCCceEEEEEEcCCC-eEEEEEeCcHHHHHHhchhccccCC-ceecCCHHHHHHHHHHHH
Q 003127 374 -------RQASKIVKVEPFNSVKKQMGVVIELPEG-GFRVHCKGASEIILAACDKFLNSNG-EVVPLNEAAVNHLNETIE 444 (845)
Q Consensus 374 -------~~~~~~l~~~~F~s~~k~~sviv~~~~~-~~~~~~kGa~~~il~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 444 (845)
+..+++++++||+|+||||+++++.+++ .+++|+|||||.|+++|++....+| +..|++++.++++.+..+
T Consensus 515 ~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~ 594 (1053)
T TIGR01523 515 QHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANME 594 (1053)
T ss_pred cccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHH
Confidence 2247889999999999999999987544 5889999999999999997665444 567899999999999999
Q ss_pred HHHHhhchhhhheeeecCCCCC---------CCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHH
Q 003127 445 KFASEALRTLCLACMEIGNEFS---------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNIN 515 (845)
Q Consensus 445 ~~~~~G~r~l~~a~~~i~~~~~---------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ 515 (845)
+|+++|+||+++|||+++.+.. ..++..|+|++|+|+++++||+|++++++|++||++||+++|+|||++.
T Consensus 595 ~~a~~GlRvLa~A~r~l~~~~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~ 674 (1053)
T TIGR01523 595 SLAAEGLRVLAFASKSFDKADNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPE 674 (1053)
T ss_pred HHHhcCCeEEEEEEEECCchhccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHH
Confidence 9999999999999999875311 0123568999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCccC----------CceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcC
Q 003127 516 TAKAIARECGILTD----------NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGD 585 (845)
Q Consensus 516 ta~~ia~~lgi~~~----------~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GD 585 (845)
||.++|+++|+..+ ...+++|++++.++++++.+...+..+|+|++|+||.++|+.+|++ |++|+|+||
T Consensus 675 tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-g~~Vam~GD 753 (1053)
T TIGR01523 675 TAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRR-KAFCAMTGD 753 (1053)
T ss_pred HHHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhc-CCeeEEeCC
Confidence 99999999999754 3479999999999999999999889999999999999999999998 999999999
Q ss_pred CccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 586 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 665 (845)
Q Consensus 586 g~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~ 665 (845)
|.||+|||++||||||||.+|+|.+|++||+++.+|+|.++.+++++||++|+|+++++.|.+++|+..+++.+++.++.
T Consensus 754 GvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~ 833 (1053)
T TIGR01523 754 GVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFR 833 (1053)
T ss_pred CcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 99999999999999999988999999999999999999999999999999999999999999999999999988887774
Q ss_pred ---C--CCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 003127 666 ---G--NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKA 740 (845)
Q Consensus 666 ---~--~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (845)
| +.||+++|++|+|+++|.+|+++++.|+|++++|++||++++++++++.++..++..+++.+...+..++...+
T Consensus 834 ~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~ 913 (1053)
T TIGR01523 834 DENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILY 913 (1053)
T ss_pred cccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 47999999999999999999999999999999999999999999999999988888888876655433321100
Q ss_pred cc--c---CC-----CC--CccchhhhHHHHHHHHHHHhccccccccccccccc----------------CCchhHHHHH
Q 003127 741 VF--R---LD-----GP--DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK----------------GILKNYVFVA 792 (845)
Q Consensus 741 ~~--~---~~-----~~--~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~----------------~~~~n~~~~~ 792 (845)
.+ + .. +. .....++|++|.+++++|+++.+++|+. +.++|+ +.++|++++.
T Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~~a~t~~f~~l~~~~~~~~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~ 992 (1053)
T TIGR01523 914 GFGSGNLGHDCDAHYHAGCNDVFKARSAAFATMTFCALILAVEVKDF-DNSFFNLHGIPDGDSNFKEFFHSIVENKFLAW 992 (1053)
T ss_pred hccCccccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHhcC-chhhhhcCccccccccccccccCCccCHHHHH
Confidence 00 0 00 00 1123578999999999999999999953 445554 2579999999
Q ss_pred HHHHHHHHHH--HHHHHhhh-cccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 793 VLTCTVLFQI--IIIELLGT-FANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 793 ~~~~~~~~~~--~~v~~~~~-~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
++++++++++ +++|+++. +|+++|+++ .|+++++++++.++++|++|++.
T Consensus 993 ~~~~~~~l~~~~~~~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~ 1045 (1053)
T TIGR01523 993 AIAFAAVSAFPTIYIPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGK 1045 (1053)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888874 55788885 999999997 79999999999999999999875
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-125 Score=1141.94 Aligned_cols=829 Identities=31% Similarity=0.464 Sum_probs=705.8
Q ss_pred hHHHHHHHHHHHHHHhhcccCC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEe
Q 003127 2 TLMILAVCALVSLVVGIATEGW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKIS 79 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~--~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~ 79 (845)
++++|+++|++|++++.+++++ ..+|.++..+++.+++...++.+++++.++..+++.+ ..+.+++|+|||++++|+
T Consensus 9 ~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~-~~~~~~~ViRdg~~~~I~ 87 (917)
T TIGR01116 9 LVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKE-YESEHAKVLRDGRWSVIK 87 (917)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCceEEEECCEEEEEE
Confidence 5789999999999998765322 2479999999999999999999999999999998876 456789999999999999
Q ss_pred cCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC------------CCeEEeccEEEeceEEEEE
Q 003127 80 IYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQNGSCKMLV 147 (845)
Q Consensus 80 ~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~------------~~~v~~Gt~v~~g~~~~~V 147 (845)
++||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.+.+|+++++|
T Consensus 88 ~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v~~G~~~~~V 167 (917)
T TIGR01116 88 AKDLVPGDIVELAVGDKVPADIRVLSLKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVV 167 (917)
T ss_pred HHHCCCCCEEEECCCCEeeccEEEEEecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEEecceEEEEE
Confidence 9999999999999999999999999998899999999999999999642 3789999999999999999
Q ss_pred EEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHH
Q 003127 148 TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 227 (845)
Q Consensus 148 ~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (845)
++||.+|++||+.+++.+++.+++|+|+++++++..+..+++++++++++++...+. . . . ...+....+...
T Consensus 168 ~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~-~-~--~----~~~~~~~~~~~~ 239 (917)
T TIGR01116 168 VRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN-D-P--A----LGGGWIQGAIYY 239 (917)
T ss_pred EEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c-c--c----ccchhHHHHHHH
Confidence 999999999999999998888899999999999999888777766665554322111 0 0 0 001111245566
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCee---
Q 003127 228 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEI--- 304 (845)
Q Consensus 228 ~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~--- 304 (845)
+..++++++++||++||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|++.+++..+..
T Consensus 240 ~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 319 (917)
T TIGR01116 240 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSS 319 (917)
T ss_pred HHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccc
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999876532
Q ss_pred ---EEecCCCCCCCCC--------CCCChhHHHHHHHHHHhcCCceEEecCC-CceEEcCCchHHHHHHHHHHcCCChHH
Q 003127 305 ---KEVDNSKGTPAFG--------SSIPASASKLLLQSIFNNTGGEVVIGEG-NKTEILGTPTETAILEFGLLLGGDFQA 372 (845)
Q Consensus 305 ---~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~p~e~al~~~~~~~~~~~~~ 372 (845)
+..++....+... ....+...+.+..+..+||++....+++ +.....|||+|.|+++++.+.|.+...
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~ 399 (917)
T TIGR01116 320 LNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATK 399 (917)
T ss_pred cceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchh
Confidence 2222211111100 0001223445566677788776644322 223346999999999999988866432
Q ss_pred ----------------hhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHH
Q 003127 373 ----------------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAV 436 (845)
Q Consensus 373 ----------------~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~ 436 (845)
.++.+++++++||+|+||||+++++.+ +++++|+|||||.|+++|++++.++|...|++++.+
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~ 478 (917)
T TIGR01116 400 NGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMK 478 (917)
T ss_pred cccccccccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHH
Confidence 234677999999999999999999864 568999999999999999988777788899999999
Q ss_pred HHHHHHHHHHHH-hhchhhhheeeecCCCCC-------CCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEE
Q 003127 437 NHLNETIEKFAS-EALRTLCLACMEIGNEFS-------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRM 508 (845)
Q Consensus 437 ~~~~~~~~~~~~-~G~r~l~~a~~~i~~~~~-------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~ 508 (845)
+++.+..++|++ +|+||+++|||.++.+.. ...+.+|+|++|+|+++++||+|++++++|++||++|++++|
T Consensus 479 ~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~m 558 (917)
T TIGR01116 479 NTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIM 558 (917)
T ss_pred HHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEE
Confidence 999999999999 999999999999865321 112456899999999999999999999999999999999999
Q ss_pred EcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEc
Q 003127 509 VTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 584 (845)
Q Consensus 509 ~TGd~~~ta~~ia~~lgi~~~~~----~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~G 584 (845)
+|||+..+|.++|+++|+..++. ..++|+++..+.+++..+...+..+|+|++|+||.++++.+|+. |++|+|+|
T Consensus 559 iTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~va~iG 637 (917)
T TIGR01116 559 ITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQEQ-GEIVAMTG 637 (917)
T ss_pred ecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHhc-CCeEEEec
Confidence 99999999999999999986543 47899999999998888888889999999999999999999987 99999999
Q ss_pred CCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 003127 585 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACL 664 (845)
Q Consensus 585 Dg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~ 664 (845)
||.||+|||++||+||||| +|++.+|++||+++.+|++..+.+++++||++|+|+++++.|.+++|+..+++.+++.++
T Consensus 638 DG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~ 716 (917)
T TIGR01116 638 DGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAAL 716 (917)
T ss_pred CCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999998888
Q ss_pred cCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q 003127 665 TGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRL 744 (845)
Q Consensus 665 ~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (845)
..+.|++++|++|+|+++|.+|+++++.++|++++|++||+.++++++++.++..|++.+++++++.+..+++.....+.
T Consensus 717 ~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 796 (917)
T TIGR01116 717 GIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHF 796 (917)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 88899999999999999999999999999999999999999999999999999999999999987644332211110010
Q ss_pred -----------C---CC-----CccchhhhHHHHHHHHHHHhccccccccccccccc-CCchhHHHHHHHHHHHHHHHHH
Q 003127 745 -----------D---GP-----DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFVAVLTCTVLFQIII 804 (845)
Q Consensus 745 -----------~---~~-----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~-~~~~n~~~~~~~~~~~~~~~~~ 804 (845)
+ +. .....++|++|.+++++|++|.+++|+ .+.++|+ ++++|++++.++++++++|+++
T Consensus 797 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~ 875 (917)
T TIGR01116 797 TGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALS-EDQSLLRMPPWVNKWLIGAICLSMALHFLI 875 (917)
T ss_pred ccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcC-CcccccccCCccCHHHHHHHHHHHHHHHHH
Confidence 0 00 012356899999999999999999996 4557776 7789999999999999888654
Q ss_pred --HHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 805 --IELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 805 --v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
+|+++.+|++.|+++.+|+++++++++.++++|++|++.
T Consensus 876 ~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~ 916 (917)
T TIGR01116 876 LYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFS 916 (917)
T ss_pred HHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999999999999999999999999999999875
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-124 Score=1136.44 Aligned_cols=820 Identities=28% Similarity=0.399 Sum_probs=682.4
Q ss_pred hHHHHHHHHHHHHHHhhcccC-----CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEE
Q 003127 2 TLMILAVCALVSLVVGIATEG-----WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 76 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~-----~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~ 76 (845)
+.++|+++++++++...+... ....|.+++.+++.+++..+++.+++++.++..+++.+ ..+.+++|+|||+++
T Consensus 74 ~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~-~~~~~~~ViRdg~~~ 152 (997)
T TIGR01106 74 FSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKN-MVPQQALVIRDGEKM 152 (997)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEE
Confidence 467888999998876433211 11357777765555555555555555555555555554 346689999999999
Q ss_pred EEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCC---------CeEEeccEEEeceEEEEE
Q 003127 77 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLV 147 (845)
Q Consensus 77 ~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~---------~~v~~Gt~v~~g~~~~~V 147 (845)
+|+++||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|..++ |++|+||.+.+|+++++|
T Consensus 153 ~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~l~~Gt~v~~G~~~~~V 232 (997)
T TIGR01106 153 SINAEQVVVGDLVEVKGGDRIPADLRIISAQGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTARGIV 232 (997)
T ss_pred EeeHHHCCCCCEEEECCCCEEeeeEEEEEccCcEEEccccCCCCCceeccCCCcccCccccCCeEEeccEeeeeeEEEEE
Confidence 99999999999999999999999999999988999999999999999996542 579999999999999999
Q ss_pred EEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHH
Q 003127 148 TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 227 (845)
Q Consensus 148 ~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (845)
++||.+|++||+.+.+.+.+.+++|+++.++++.+.+..+++++++++++++.. . +. .+...
T Consensus 233 ~~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~~----------~~~~~ 294 (997)
T TIGR01106 233 VNTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------TWLEA 294 (997)
T ss_pred EEccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h-----cC----------CHHHH
Confidence 999999999999998888777789999999999999988877777665554321 1 11 34567
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEe
Q 003127 228 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 307 (845)
Q Consensus 228 ~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~ 307 (845)
+.+++++++++|||+||++++++++.+.++|+++|+++|+++++|+||++++||+|||||||+|+|+|.+++.++..+..
T Consensus 295 ~~~~i~v~v~~iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 374 (997)
T TIGR01106 295 VIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA 374 (997)
T ss_pred HHHHHHHHhhcCCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEec
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999998877654
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEe
Q 003127 308 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 383 (845)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~ 383 (845)
+.................+.+...+.+||++....++.+ +....|||+|.|+++++.+.+.+....++.+++++.+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~~v~~~ 454 (997)
T TIGR01106 375 DTTEDQSGVSFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVVEI 454 (997)
T ss_pred CCccCCCCccCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCceeEEe
Confidence 322111000011111234455566777877665433222 2345799999999999988776666677789999999
Q ss_pred cCCCCCceEEEEEEcC---CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 384 PFNSVKKQMGVVIELP---EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 384 ~F~s~~k~~sviv~~~---~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
||+|+||||+++++.. ++.+++++|||||.|+++|++++ .+|+..+++++.++.+.+..++++++|+||+++|||+
T Consensus 455 pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~GlRvla~A~k~ 533 (997)
T TIGR01106 455 PFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLY 533 (997)
T ss_pred ccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEee
Confidence 9999999999988642 24688999999999999999876 5788889999999999999999999999999999999
Q ss_pred cCCCCCC--------CCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--
Q 003127 461 IGNEFSA--------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-- 530 (845)
Q Consensus 461 i~~~~~~--------~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-- 530 (845)
++.+... +.+..|+|++|+|+++++||+|++++++|++|+++|++++|+|||++.+|.++|+++|+..++
T Consensus 534 l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 613 (997)
T TIGR01106 534 LPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 613 (997)
T ss_pred cCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcc
Confidence 8653111 112348899999999999999999999999999999999999999999999999999997542
Q ss_pred ----------------------ceeeeCcccccCCHHHHhhhcCCe--eEEEEeChhcHHHHHHHHHhhcCCEEEEEcCC
Q 003127 531 ----------------------GIAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 586 (845)
Q Consensus 531 ----------------------~~~i~g~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg 586 (845)
..+++|++++.+.++++.+.+.+. .+|||++|+||.++|+.+|+. |++|+|+|||
T Consensus 614 ~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~~~GDG 692 (997)
T TIGR01106 614 TVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDG 692 (997)
T ss_pred chhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEEEECCC
Confidence 268999999999999999888765 499999999999999999988 9999999999
Q ss_pred ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 003127 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 666 (845)
Q Consensus 587 ~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~ 666 (845)
.||+|||++||||||||++|+|.+|++||+++.+|+|.++++++++||++|.|+++++.|.++.|+..+++.+++.++..
T Consensus 693 ~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 772 (997)
T TIGR01106 693 VNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIANI 772 (997)
T ss_pred cccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcC
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCC-CCCCcCHHHHHHH-HHHHHHHHHHHHHHHHhcc-----
Q 003127 667 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGR-KGNFISNVMWRNI-LGQSLYQFLIIWYLQTRGK----- 739 (845)
Q Consensus 667 ~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----- 739 (845)
++|++++|++|+|+++|++|+++++.|++++++|++||+++ +++++++.++..+ +..++++++..++.++...
T Consensus 773 ~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~ 852 (997)
T TIGR01106 773 PLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGF 852 (997)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999975 6789998877554 3446666655444332111
Q ss_pred ---ccccC---------CCC--C------c------cchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHH
Q 003127 740 ---AVFRL---------DGP--D------P------DLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAV 793 (845)
Q Consensus 740 ---~~~~~---------~~~--~------~------~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 793 (845)
..++. ++. . . ...++|++|.+++++|++|.++||+ ++.++|++.++|++++.+
T Consensus 853 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~-~~~~~f~~~~~n~~l~~~ 931 (997)
T TIGR01106 853 LPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKT-RRNSVFQQGMKNKILIFG 931 (997)
T ss_pred ccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhcc-CcccccccCCcCHHHHHH
Confidence 01111 000 0 0 0146899999999999999999996 566788755899999999
Q ss_pred HHHHHHHHH--HHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 794 LTCTVLFQI--IIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 794 ~~~~~~~~~--~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
+++.+++++ .++|+++.+|++.|+++.+|+++++++++.+++.++.|++.
T Consensus 932 ~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 983 (997)
T TIGR01106 932 LFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLII 983 (997)
T ss_pred HHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877764 45677899999999999999999999999999999999764
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-124 Score=1124.56 Aligned_cols=802 Identities=36% Similarity=0.545 Sum_probs=687.7
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
++++|++++++|++++...... .+...+...++++.++...++++.++..+++++.. +.+++|+|||++++|+++
T Consensus 82 ~~~iL~~~a~~s~~~~~~~~~~----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~-~~~~~V~R~g~~~~i~a~ 156 (917)
T COG0474 82 FIILLLVAALLSAFVGDWVDAG----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMS-SPKAKVLRDGKFVEIPAS 156 (917)
T ss_pred HHHHHHHHHHHHHHhhcccccC----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCceEEEeCCcEEEecHH
Confidence 5788999999999998421100 55667777778888888899999999999888754 678999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCccccc-------------CCCCeEEeccEEEeceEEEEEE
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVN-------------ALNPFLLSGTKVQNGSCKMLVT 148 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~-------------~~~~~v~~Gt~v~~g~~~~~V~ 148 (845)
||||||||++++||+||||++|+++++++||||+|||||.|+.|. +.+|++|+||.+++|++.++|+
T Consensus 157 eLVpGDiV~l~~gd~vPAD~rLl~~~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVv 236 (917)
T COG0474 157 ELVPGDIVLLEAGDVVPADLRLLESSDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVV 236 (917)
T ss_pred HCCCCcEEEECCCCccccceEEEEecCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEE
Confidence 999999999999999999999999998899999999999999995 4578999999999999999999
Q ss_pred EEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHH
Q 003127 149 TVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 228 (845)
Q Consensus 149 ~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (845)
+||.+|++|++...+.......+|++++++++.+.+..++++++++++++... . .+. .+.+.+
T Consensus 237 aTG~~T~~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~---~----~~~----------~~~~~~ 299 (917)
T COG0474 237 ATGFETEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF---R----GGN----------GLLESF 299 (917)
T ss_pred EEcCccHHHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----cCc----------cHHHHH
Confidence 99999999999999998866789999999999999988888887777766411 1 010 267889
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEec
Q 003127 229 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD 308 (845)
Q Consensus 229 ~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~ 308 (845)
..+++++++++|++||+.++++++.+.++|+++++++|+++++|+||++|+||+|||||||+|+|+|++++..+...+.+
T Consensus 300 ~~~v~l~va~IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~ 379 (917)
T COG0474 300 LTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID 379 (917)
T ss_pred HHHHHHHHhccccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999885111000
Q ss_pred CCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCC--ChHHhhhhcceEEEecCC
Q 003127 309 NSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGG--DFQAERQASKIVKVEPFN 386 (845)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~--~~~~~~~~~~~l~~~~F~ 386 (845)
. ......+....+...+.+||+.....+ + ++..+||+|.||++++.+.|. +....+..+++++.+||+
T Consensus 380 ------~-~~~~~~~~~~~~l~~~~lc~~~~~~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~~~~~~~PFd 449 (917)
T COG0474 380 ------D-KDLKDSPALLRFLLAAALCNSVTPEKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEYPILAEIPFD 449 (917)
T ss_pred ------c-cccccchHHHHHHHHHHhcCccccccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhcceeEEecCC
Confidence 0 011111223345556677887666544 3 677999999999999999998 777777788999999999
Q ss_pred CCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCC
Q 003127 387 SVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS 466 (845)
Q Consensus 387 s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~ 466 (845)
|+|||||++++.+++++++++|||||.|+++|+.. ++..+++++.++.+++..++|+++|+||+++|||..+....
T Consensus 450 S~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~~~~~~la~~glRvla~A~k~~~~~~~ 525 (917)
T COG0474 450 SERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEK 525 (917)
T ss_pred CCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcccc
Confidence 99999999999777779999999999999999875 66778999999999999999999999999999998766543
Q ss_pred CCC-CCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCC
Q 003127 467 ADA-PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKS 543 (845)
Q Consensus 467 ~~~-~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--~~i~g~~~~~~~ 543 (845)
... +..|+|++|+|+++++||+|++++++|+.|+++||++||+|||+..||.++|+++|+..+.. .+++|.++..+.
T Consensus 526 ~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~ 605 (917)
T COG0474 526 DDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALS 605 (917)
T ss_pred cchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcC
Confidence 222 57899999999999999999999999999999999999999999999999999999988763 499999999999
Q ss_pred HHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh
Q 003127 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF 623 (845)
Q Consensus 544 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~ 623 (845)
++++.+.+.++.+|||++|+||.++|+.+|++ |+.|+|+|||.||+||||+||||||||.+|+|.+|++||+++.++++
T Consensus 606 ~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~-g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~ 684 (917)
T COG0474 606 DEELAELVEELSVFARVSPEQKARIVEALQKS-GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNF 684 (917)
T ss_pred HHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhC-CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcH
Confidence 99999999999999999999999999999999 99999999999999999999999999988999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CChhhHHHHHHHHHHHHHhhhhhccCCCCcccccC
Q 003127 624 STIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN-APLTAVQLLWVNMIMDTLGALALATEPPNGDLMKR 702 (845)
Q Consensus 624 ~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~-~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~ 702 (845)
..+..+++|||++|.|+++++.|.+++|+..++..+++.+++.+ .|++++|++|+|+++|.+|+++++.++++.+.|++
T Consensus 685 ~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~~L~~~~~~~~~m~~ 764 (917)
T COG0474 685 ATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPALALGVEDPESDVMKR 764 (917)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhheeecCCCccccccc
Confidence 99999999999999999999999999999999999998888777 89999999999999999999999999999999999
Q ss_pred CCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccc-cc--CCCCC-ccchhhhHHHHHHHHHHHhccccccccccc
Q 003127 703 SPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV-FR--LDGPD-PDLILNTLIFNTFVFCQVFNEISSREMEKI 778 (845)
Q Consensus 703 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~-~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~ 778 (845)
||+++++.++++..+..+++...++..++.++.|..... +. ..+.. ......|++|.+++++|+++.+.+|. .+.
T Consensus 765 ~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~-~~~ 843 (917)
T COG0474 765 PPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRS-RGR 843 (917)
T ss_pred CCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc-ccc
Confidence 999999999999998886666555555444433222111 11 01111 14467899999999999999999994 445
Q ss_pred cccc-CCchhHHHHHHHHHHHHHHHHH--HHHhh-hcccccCCChHHHHHHHHHH--HHHHHHHHHHhh
Q 003127 779 NVFK-GILKNYVFVAVLTCTVLFQIII--IELLG-TFANTTPLNLQQWFVSILLG--FLGMPIAAVLKL 841 (845)
Q Consensus 779 ~~~~-~~~~n~~~~~~~~~~~~~~~~~--v~~~~-~~f~~~~l~~~~w~~~~~~~--~~~~~~~~i~K~ 841 (845)
+++. .+++|+.++.+++..++++++. .++.. ..|+..|+++..|++++... ...+...+.+|.
T Consensus 844 ~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 844 PFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWLIAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred chhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665 4578999999988887776543 45556 68999999988899888887 444555555554
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-122 Score=1111.10 Aligned_cols=792 Identities=32% Similarity=0.509 Sum_probs=687.2
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
+.++|++++++|+++| .|.+++.+++.++++..++.+++++.++..+++.+. .+.+++|+|||++++|+++
T Consensus 63 ~~~~L~~aa~ls~~~g--------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l-~~~~~~ViRdg~~~~I~~~ 133 (884)
T TIGR01522 63 LILLLIASAVISVFMG--------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKL-VPPECHLIREGKLEHVLAS 133 (884)
T ss_pred HHHHHHHHHHHHHHHc--------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCeeEEEECCEEEEEEHH
Confidence 4688999999999998 688998888888888889999999999888888764 4668999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC-------------CCeEEeccEEEeceEEEEEE
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL-------------NPFLLSGTKVQNGSCKMLVT 148 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~-------------~~~v~~Gt~v~~g~~~~~V~ 148 (845)
||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|..+ ++++|+||.+.+|+++++|+
T Consensus 134 eLv~GDiv~l~~Gd~IPaDg~ii~g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~ 213 (884)
T TIGR01522 134 TLVPGDLVCLSVGDRVPADLRIVEAVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVV 213 (884)
T ss_pred HCccCCEEEecCCCEEeeeEEEEEcCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEE
Confidence 99999999999999999999999998799999999999999999754 25899999999999999999
Q ss_pred EEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHH
Q 003127 149 TVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 228 (845)
Q Consensus 149 ~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (845)
+||.+|++||+.+.+.+.+..++|+|+.++++++++.+++++++++++++. ++. +. .+...+
T Consensus 214 ~tG~~T~~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~---~~~-----~~----------~~~~~~ 275 (884)
T TIGR01522 214 GTGSNTEFGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG---WFQ-----GK----------DWLEMF 275 (884)
T ss_pred EecCccHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHh-----cC----------CHHHHH
Confidence 999999999999999988888899999999999988776655444333321 111 11 356778
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEE-e
Q 003127 229 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKE-V 307 (845)
Q Consensus 229 ~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~-~ 307 (845)
..++++++++|||+||++++++++.+.++|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+. .
T Consensus 276 ~~~v~llv~aiP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~ 355 (884)
T TIGR01522 276 TISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTML 355 (884)
T ss_pred HHHHHHHHHHccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeec
Confidence 889999999999999999999999999999999999999999999999999999999999999999999987664322 1
Q ss_pred cCCCCCCC--C------CCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcce
Q 003127 308 DNSKGTPA--F------GSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 379 (845)
Q Consensus 308 ~~~~~~~~--~------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~ 379 (845)
+.....+. . .....+...+.+......|+++....+ ..+..|||+|.|+++++.+.+.+ ..+..++.
T Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~~~g~p~e~All~~~~~~~~~--~~~~~~~~ 430 (884)
T TIGR01522 356 NAVSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNE---ADTLLGNPTDVALIELLMKFGLD--DLRETYIR 430 (884)
T ss_pred cCCccCCCCcccccccccccccCHHHHHHHHHHhhhCCCeecCC---CCCcCCChHHHHHHHHHHHcCcH--hHHhhCcE
Confidence 11000000 0 000011122333444555665544322 12346899999999999887753 33446788
Q ss_pred EEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhhee
Q 003127 380 VKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 458 (845)
Q Consensus 380 l~~~~F~s~~k~~sviv~~~-~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~ 458 (845)
++.+||+|+||||+++++.+ ++++++++||+||.|+++|+.++..+|...+++++.++++.+..++++++|+|++++||
T Consensus 431 ~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~G~rvl~~A~ 510 (884)
T TIGR01522 431 VAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFAS 510 (884)
T ss_pred EeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 99999999999999998863 46789999999999999999888777888889998899999999999999999999999
Q ss_pred eecCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcc
Q 003127 459 MEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538 (845)
Q Consensus 459 ~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~ 538 (845)
+++ +++++|+|+++++||+||+++++|++|+++|++++|+|||+..+|.++|+++|+......+++|++
T Consensus 511 ~~~-----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~ 579 (884)
T TIGR01522 511 GPE-----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEK 579 (884)
T ss_pred EcC-----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHH
Confidence 864 357999999999999999999999999999999999999999999999999999877778899999
Q ss_pred cccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEe
Q 003127 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVII 618 (845)
Q Consensus 539 ~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~ 618 (845)
++.++++++.+.+.+..+|+|++|+||.++++.+|+. |+.|+|+|||.||+||+++||+|||||.+|++.++++||+++
T Consensus 580 l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~-g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl 658 (884)
T TIGR01522 580 LDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKR-GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDVAKEAADMIL 658 (884)
T ss_pred hHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHC-CCEEEEECCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEE
Confidence 9999999999999999999999999999999999998 999999999999999999999999999779999999999999
Q ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcc
Q 003127 619 LDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGD 698 (845)
Q Consensus 619 ~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~ 698 (845)
.+|++..+.+++++||++|+|+++++.|.++.|+..+++.+++.++..+.|++++|++|+|+++|.+|+++++.|+|+++
T Consensus 659 ~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~~l~~e~~~~~ 738 (884)
T TIGR01522 659 TDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQSLGVEPVDKD 738 (884)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHHHhccCCCChh
Confidence 99999999999999999999999999999999999998888888888899999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCccchhhhHHHHHHHHHHHhccccccccccc
Q 003127 699 LMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKI 778 (845)
Q Consensus 699 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~ 778 (845)
+|++||++++++++++.+|..++.++++++++.+++++... . .+ .....++|++|.+++++|++|.+++|+ .+.
T Consensus 739 ~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~--~~-~~~~~~~t~~f~~~v~~q~~~~~~~r~-~~~ 812 (884)
T TIGR01522 739 VMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREM--Q--DG-VITARDTTMTFTCFVFFDMFNALACRS-QTK 812 (884)
T ss_pred HhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHH--c--CC-cchhhHHHHHHHHHHHHHHHHHHHHcc-CCc
Confidence 99999999999999999999999999988776555443211 1 11 112246899999999999999999996 466
Q ss_pred cccc-CCchhHHHHHHHHHHHHHHHH--HHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 779 NVFK-GILKNYVFVAVLTCTVLFQII--IIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 779 ~~~~-~~~~n~~~~~~~~~~~~~~~~--~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
++|+ ++++|++++.+++++++++++ ++|+++.+|++.|+++.+|+++++++++.+++.|++|++.
T Consensus 813 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~ 880 (884)
T TIGR01522 813 SVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVE 880 (884)
T ss_pred cccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7786 778999999999999888864 4578999999999999999999999999999999999875
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-117 Score=1065.05 Aligned_cols=775 Identities=26% Similarity=0.366 Sum_probs=643.7
Q ss_pred hHHHHHHHHHHHHHHhhcc---cCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECC-----
Q 003127 2 TLMILAVCALVSLVVGIAT---EGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG----- 73 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~---~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g----- 73 (845)
++++|++++++|++++.+. ++....|.++..+++.+++..+++.+++++.++..+++.+.. +.+++|+|||
T Consensus 83 ~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~-~~~~~V~Rdg~~~~~ 161 (903)
T PRK15122 83 FIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMV-RTTATVLRRGHAGAE 161 (903)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCceEEEECCccCCC
Confidence 4689999999999997643 122347899998888888888889999999999999888744 5679999994
Q ss_pred -eEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccC----------------------CCC
Q 003127 74 -FRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA----------------------LNP 130 (845)
Q Consensus 74 -~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~----------------------~~~ 130 (845)
++++|+++||+|||+|.+++||+|||||++++|+++.||||+|||||.|+.|.. .++
T Consensus 162 g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n 241 (903)
T PRK15122 162 PVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPN 241 (903)
T ss_pred CeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccc
Confidence 899999999999999999999999999999999888999999999999999963 136
Q ss_pred eEEeccEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 003127 131 FLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQE 210 (845)
Q Consensus 131 ~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 210 (845)
.+|+||.+.+|+++++|++||.+|++||+.+.+.+ ...++|++++++++.+.+..++..++.+++++. .+. .
T Consensus 242 ~vfaGT~V~~G~~~~~V~atG~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~---~~~----~ 313 (903)
T PRK15122 242 ICFMGTNVVSGTATAVVVATGSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLIN---GFT----K 313 (903)
T ss_pred eEEeCCEEEeeeEEEEEEEeccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhh---hhc----c
Confidence 89999999999999999999999999999999887 455699999999999888776655544443321 110 0
Q ss_pred CCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCC
Q 003127 211 GTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTT 290 (845)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~ 290 (845)
+ ++...+.+++++++++|||+||++++++++.+..+|+++|+++|+++++|+||++|+||||||||||+
T Consensus 314 ~-----------~~~~~l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~ 382 (903)
T PRK15122 314 G-----------DWLEALLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQ 382 (903)
T ss_pred C-----------CHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCccccc
Confidence 1 35667888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCCh
Q 003127 291 NHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDF 370 (845)
Q Consensus 291 ~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~ 370 (845)
|+|+|.+++..+.. .+ .+.+..+. .|+.. + ...+||+|.|+++++.+.+..
T Consensus 383 ~~m~V~~~~~~~~~----------------~~--~~~l~~a~-l~s~~-----~----~~~~~p~e~All~~a~~~~~~- 433 (903)
T PRK15122 383 DRIILEHHLDVSGR----------------KD--ERVLQLAW-LNSFH-----Q----SGMKNLMDQAVVAFAEGNPEI- 433 (903)
T ss_pred CeEEEEEEEcCCCC----------------Ch--HHHHHHHH-HhCCC-----C----CCCCChHHHHHHHHHHHcCch-
Confidence 99999987632210 00 12222222 22210 0 116899999999999887643
Q ss_pred HHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhh
Q 003127 371 QAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEA 450 (845)
Q Consensus 371 ~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 450 (845)
.....++.++++||++.+|+|+++++..++++++++||+||.++++|+.+. .+|...+++++.++++.+..++++++|
T Consensus 434 -~~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G 511 (903)
T PRK15122 434 -VKPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRERLLALAEAYNADG 511 (903)
T ss_pred -hhhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhCC
Confidence 223457888999999999999999987667789999999999999999765 467778899999999999999999999
Q ss_pred chhhhheeeecCCCCCC--CCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 451 LRTLCLACMEIGNEFSA--DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 451 ~r~l~~a~~~i~~~~~~--~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
+|++++|||+++.+... .....|+|++|+|+++++||+||+++++|++||++||+++|+|||++.||.++|+++|+..
T Consensus 512 ~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~ 591 (903)
T PRK15122 512 FRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP 591 (903)
T ss_pred CEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC
Confidence 99999999988654321 1123578999999999999999999999999999999999999999999999999999963
Q ss_pred CCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcH
Q 003127 529 DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE 608 (845)
Q Consensus 529 ~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~ 608 (845)
+.+++|++++.++++++.+.+.+..+|+|++|+||.++|+.+|++ |++|+|+|||.||+|||++|||||||| +|+|
T Consensus 592 --~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGDGvNDaPALk~ADVGIAmg-~gtd 667 (903)
T PRK15122 592 --GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQAN-GHTVGFLGDGINDAPALRDADVGISVD-SGAD 667 (903)
T ss_pred --CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhC-CCEEEEECCCchhHHHHHhCCEEEEeC-cccH
Confidence 368999999999999999999999999999999999999999998 999999999999999999999999999 9999
Q ss_pred HHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhh
Q 003127 609 VAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGAL 688 (845)
Q Consensus 609 ~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~ 688 (845)
.||++||+++.+||+..+++++++||++|+|+++++.|.++.|+..++..++..++..+.|+++.|++|+|+++|. |++
T Consensus 668 vAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~l 746 (903)
T PRK15122 668 IAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQL 746 (903)
T ss_pred HHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999999999999999999999999999988887777666666689999999999999995 899
Q ss_pred hhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCccchhhhHHHHHHHHHHHhc
Q 003127 689 ALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFN 768 (845)
Q Consensus 689 ~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~ 768 (845)
+++.|+|++++| +||++++++++++.++..-+..+++ ++..+++++.. +..+........+|..|.+++++|+++
T Consensus 747 al~~d~~~~~~m-~~P~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~t~~f~~l~~~q~~~ 821 (903)
T PRK15122 747 SLPWDKMDKEFL-RKPRKWDAKNIGRFMLWIGPTSSIF-DITTFALMWFV---FAANSVEMQALFQSGWFIEGLLSQTLV 821 (903)
T ss_pred hhcCCCCCHhhc-CCCCCCChhhhHHHHHHHHHHHHHH-HHHHHHHHHHH---hccCcHhhhhhhHHHHHHHHHHHHHHH
Confidence 999999999999 9999999999998776422222222 22222221111 110110100134688899999999999
Q ss_pred ccccccccccccccCCchhHHHHHHHHHHHHHH--HHHHHH--hhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 769 EISSREMEKINVFKGILKNYVFVAVLTCTVLFQ--IIIIEL--LGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 769 ~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~v~~--~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
.+++|+ ++.++|++ ++.+..++.+++++ ++++|+ ++.+|+++|+++.+|+++++++++++++.|+.|.+
T Consensus 822 ~~~~R~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 894 (903)
T PRK15122 822 VHMLRT-QKIPFIQS----TAALPVLLTTGLIMAIGIYIPFSPLGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMKRF 894 (903)
T ss_pred HHhhCc-CCCCcCcc----hHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999995 34355654 33333343444443 345665 78999999999999999999999999999998844
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-117 Score=1055.81 Aligned_cols=767 Identities=23% Similarity=0.360 Sum_probs=630.0
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEEC------CeE
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN------GFR 75 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~------g~~ 75 (845)
+.++|++++++|+++| .|.++..+++.+++..+++.+++++.++..+++.+. .+.+++|+|| |++
T Consensus 105 ~~~lL~~aa~ls~~~~--------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l-~~~~a~ViR~g~~~~~g~~ 175 (902)
T PRK10517 105 FNILLTILGAISYATE--------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAM-VSNTATVLRVINDKGENGW 175 (902)
T ss_pred HHHHHHHHHHHHHHHc--------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCccCCCCeE
Confidence 3567889999999987 688988888888888888888888888888888765 4567999999 789
Q ss_pred EEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCC------------CeEEeccEEEeceE
Q 003127 76 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSC 143 (845)
Q Consensus 76 ~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~------------~~v~~Gt~v~~g~~ 143 (845)
++|+++||||||+|.+++||+|||||++++|+++.||||+|||||.|+.|..++ +.+|+||.+.+|++
T Consensus 176 ~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~ 255 (902)
T PRK10517 176 LEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTA 255 (902)
T ss_pred EEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeE
Confidence 999999999999999999999999999999988999999999999999997542 57999999999999
Q ss_pred EEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHH
Q 003127 144 KMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 223 (845)
Q Consensus 144 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (845)
+++|++||.+|++||+.+.+.+.+.+++|+|+.++++++++..++++++.++++++. +. .+ +
T Consensus 256 ~~vV~atG~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~---~~----~~-----------~ 317 (902)
T PRK10517 256 QAVVIATGANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLING---YT----KG-----------D 317 (902)
T ss_pred EEEEEEeccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHH---Hh----cC-----------C
Confidence 999999999999999999999888888999999999999988877766665554421 11 01 3
Q ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCe
Q 003127 224 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 303 (845)
Q Consensus 224 ~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~ 303 (845)
+...+..++++++++|||+||++++++++.++++|+++|+++|+++++|+||++|+||||||||||+|+|+|.++...
T Consensus 318 ~~~~l~~alsv~V~~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~-- 395 (902)
T PRK10517 318 WWEAALFALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDI-- 395 (902)
T ss_pred HHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecC--
Confidence 556788899999999999999999999999999999999999999999999999999999999999999999875311
Q ss_pred eEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEe
Q 003127 304 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 383 (845)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~ 383 (845)
.+. ...+.+ ...+.|+.. . ...+||.|.|+++++...+ .....+.++.++.+
T Consensus 396 ----~~~------------~~~~ll-~~a~l~~~~--~-------~~~~~p~d~All~~a~~~~--~~~~~~~~~~~~~~ 447 (902)
T PRK10517 396 ----SGK------------TSERVL-HSAWLNSHY--Q-------TGLKNLLDTAVLEGVDEES--ARSLASRWQKIDEI 447 (902)
T ss_pred ----CCC------------CHHHHH-HHHHhcCCc--C-------CCCCCHHHHHHHHHHHhcc--hhhhhhcCceEEEe
Confidence 000 011222 222223221 0 1168999999999987543 12234567888999
Q ss_pred cCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCC
Q 003127 384 PFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN 463 (845)
Q Consensus 384 ~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~ 463 (845)
||++++|+|+++++..++.+.+++||+||.++++|+.+. .++...+++++.++++.+..++++++|+|++++|||+++.
T Consensus 448 pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~ 526 (902)
T PRK10517 448 PFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRRIKRVTDTLNRQGLRVVAVATKYLPA 526 (902)
T ss_pred eeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCc
Confidence 999999999999987677788999999999999999765 4566788999889999999999999999999999998865
Q ss_pred CCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCC
Q 003127 464 EFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 543 (845)
Q Consensus 464 ~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~ 543 (845)
+........|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||. +..+++|++++.++
T Consensus 527 ~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~--~~~v~~G~el~~l~ 604 (902)
T PRK10517 527 REGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLD--AGEVLIGSDIETLS 604 (902)
T ss_pred cccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--ccCceeHHHHHhCC
Confidence 4322212247899999999999999999999999999999999999999999999999999995 34789999999999
Q ss_pred HHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh
Q 003127 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF 623 (845)
Q Consensus 544 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~ 623 (845)
++++.+.+.+..+|+|++|+||.++|+.+|++ |++|+|+|||.||+|||++|||||||| +|+|.||++||+++.+|++
T Consensus 605 ~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~-G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvAkeaADiVLldd~~ 682 (902)
T PRK10517 605 DDELANLAERTTLFARLTPMHKERIVTLLKRE-GHVVGFMGDGINDAPALRAADIGISVD-GAVDIAREAADIILLEKSL 682 (902)
T ss_pred HHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHC-CCEEEEECCCcchHHHHHhCCEEEEeC-CcCHHHHHhCCEEEecCCh
Confidence 99999999999999999999999999999998 999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCC
Q 003127 624 STIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRS 703 (845)
Q Consensus 624 ~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~ 703 (845)
..+++++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|+++++.|++++++|++|
T Consensus 683 ~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~al~~d~~~~~~m~~p 761 (902)
T PRK10517 683 MVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVAIPFDNVDDEQIQKP 761 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHhhcCCCCChhhhcCC
Confidence 999999999999999999999999999999988888777766568999999999999999 7899999999999999998
Q ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCccchhhhHHHHHHHHHHHhcccccccccccccccC
Q 003127 704 PVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKG 783 (845)
Q Consensus 704 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~ 783 (845)
|+ |+...+.+. +...+++.+++.+..++...+.++..........++..|.+++++|+++.+++|+ .+.++|
T Consensus 762 ~r-~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~~~R~-~~~~~~-- 833 (902)
T PRK10517 762 QR-WNPADLGRF----MVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVHMIRT-RRIPFI-- 833 (902)
T ss_pred CC-CCHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHHhhcc-CCCCcc--
Confidence 87 332223222 3333444332222211111111121111000124456699999999999999995 333444
Q ss_pred CchhHHHHHHHHHHHHHH--HHHHH--HhhhcccccCCC--hHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 784 ILKNYVFVAVLTCTVLFQ--IIIIE--LLGTFANTTPLN--LQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 784 ~~~n~~~~~~~~~~~~~~--~~~v~--~~~~~f~~~~l~--~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
+|++.+..++.+++++ .+++| +++.+|++.|++ +..|++++.++++ ++.|+.|.+.
T Consensus 834 --~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~e~~K~~~ 895 (902)
T PRK10517 834 --QSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVAILAGYM--TLTQLVKGFY 895 (902)
T ss_pred --cchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 4555555555555544 34455 678999999999 6777777776665 6688888543
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-115 Score=1044.50 Aligned_cols=766 Identities=25% Similarity=0.364 Sum_probs=631.0
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEE------CCeE
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR------NGFR 75 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r------~g~~ 75 (845)
+.++|++++++|++.+ .|.++..+++.+++..+++.+++++.++..+++++. .+.+++|+| ||++
T Consensus 71 ~~~iL~~~a~ls~~~~--------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l-~~~~~~V~R~~~~~~dg~~ 141 (867)
T TIGR01524 71 FIYILAMLMGVSYLTD--------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNM-VKNTATVLRVINENGNGSM 141 (867)
T ss_pred HHHHHHHHHHHHHHHh--------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhh-ccCeeEEEEecccCCCCeE
Confidence 4678999999999987 688998888888888888888999888888888764 456899999 9999
Q ss_pred EEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCC------------CeEEeccEEEeceE
Q 003127 76 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN------------PFLLSGTKVQNGSC 143 (845)
Q Consensus 76 ~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~------------~~v~~Gt~v~~g~~ 143 (845)
++|+++||+|||+|.+++||+|||||++++|+++.||||+|||||.|+.|..++ +++|+||.+.+|++
T Consensus 142 ~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~ 221 (867)
T TIGR01524 142 DEVPIDALVPGDLIELAAGDIIPADARVISARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHA 221 (867)
T ss_pred EEEEhhcCCCCCEEEECCCCEEcccEEEEecCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEE
Confidence 999999999999999999999999999999988999999999999999997543 57999999999999
Q ss_pred EEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHH
Q 003127 144 KMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALE 223 (845)
Q Consensus 144 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (845)
+++|++||.+|++||+.+.+.+ ..+++|+|+.++++++++..++++++.++++++.. . .+ +
T Consensus 222 ~~~V~~tG~~T~~gki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---~----~~-----------~ 282 (867)
T TIGR01524 222 QAVVLATGSSTWFGSLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---M----KG-----------D 282 (867)
T ss_pred EEEEEEEcCccHHHHHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---h----cC-----------C
Confidence 9999999999999999999988 55679999999999999988877766665544221 0 01 3
Q ss_pred HHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCe
Q 003127 224 ILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 303 (845)
Q Consensus 224 ~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~ 303 (845)
+...+..++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 283 ~~~~~~~al~l~v~~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~ 362 (867)
T TIGR01524 283 WLEAFLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG 362 (867)
T ss_pred HHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC
Confidence 45678889999999999999999999999999999999999999999999999999999999999999999988642110
Q ss_pred eEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEe
Q 003127 304 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 383 (845)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~ 383 (845)
. ...+.+..+ ++|+... ...+||.|.|+++++.+.. ....+..++.++.+
T Consensus 363 ~------------------~~~~~l~~a-~l~~~~~---------~~~~~p~~~Al~~~~~~~~--~~~~~~~~~~~~~~ 412 (867)
T TIGR01524 363 E------------------TSERVLKMA-WLNSYFQ---------TGWKNVLDHAVLAKLDESA--ARQTASRWKKVDEI 412 (867)
T ss_pred C------------------CHHHHHHHH-HHhCCCC---------CCCCChHHHHHHHHHHhhc--hhhHhhcCceEEEe
Confidence 0 012222222 2232210 1157999999999987542 22334567888999
Q ss_pred cCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCC
Q 003127 384 PFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN 463 (845)
Q Consensus 384 ~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~ 463 (845)
||+|+||+|+++++.+++.+++++||+||.++++|+.+. .++...+++++.++++.+..++++++|+|++++|||+++.
T Consensus 413 pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~i~~~~~~~a~~G~rvlavA~~~~~~ 491 (867)
T TIGR01524 413 PFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSELQDMTAEMNRQGIRVIAVATKTLKV 491 (867)
T ss_pred ccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHHHHHHHHHHHhcCCEEEEEEEeccCc
Confidence 999999999999987666688999999999999998764 4667778998888899999999999999999999998876
Q ss_pred CCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCC
Q 003127 464 EFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKS 543 (845)
Q Consensus 464 ~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~ 543 (845)
+........|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+.. ..+++|.+++.++
T Consensus 492 ~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~--~~v~~g~~l~~~~ 569 (867)
T TIGR01524 492 GEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA--NDFLLGADIEELS 569 (867)
T ss_pred ccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC--CCeeecHhhhhCC
Confidence 43211122478899999999999999999999999999999999999999999999999999964 3689999999999
Q ss_pred HHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh
Q 003127 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF 623 (845)
Q Consensus 544 ~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~ 623 (845)
++++.+.+.+..+|+|++|+||.++|+.+|++ |++|+|+|||.||+|||++||+||||| +|+|.||++||+++.+|++
T Consensus 570 ~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~-G~vVam~GDGvNDapALk~AdVGIAmg-~gtdvAk~aADiVLldd~~ 647 (867)
T TIGR01524 570 DEELARELRKYHIFARLTPMQKSRIIGLLKKA-GHTVGFLGDGINDAPALRKADVGISVD-TAADIAKEASDIILLEKSL 647 (867)
T ss_pred HHHHHHHhhhCeEEEECCHHHHHHHHHHHHhC-CCEEEEECCCcccHHHHHhCCEEEEeC-CccHHHHHhCCEEEecCCh
Confidence 99999999999999999999999999999998 999999999999999999999999999 9999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCC
Q 003127 624 STIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRS 703 (845)
Q Consensus 624 ~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~ 703 (845)
..+++++++||++|+|+++++.|.++.|+..++..+++.++..+.|+++.|++|+|+++| +|+++++.|+|++++|++|
T Consensus 648 ~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~al~~~~~~~~~m~~p 726 (867)
T TIGR01524 648 MVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLTLPWDKMDREFLKKP 726 (867)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHhhcCCCCChHhhCCC
Confidence 999999999999999999999999999999888887777776668999999999999999 7999999999999999765
Q ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCccchhhhHHHHHHHHHHHhcccccccccccccccC
Q 003127 704 PVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKG 783 (845)
Q Consensus 704 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~ 783 (845)
|+ ++++.+.+. +...+++.+++.+..++.....+...+.......+|..|.+++++|+++.+++|+. +.++|
T Consensus 727 ~~-~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~R~~-~~~~~-- 798 (867)
T TIGR01524 727 HQ-WEQKGMGRF----MLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMIRTE-KIPFI-- 798 (867)
T ss_pred CC-CChhhHHHH----HHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhhCcC-CCCcC--
Confidence 55 666443333 33344433322211111100001101111112347888999999999999999953 33444
Q ss_pred CchhHHHHHHHHHHHHHHH--HHHHH--hhhcccccCCC--hHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 784 ILKNYVFVAVLTCTVLFQI--IIIEL--LGTFANTTPLN--LQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 784 ~~~n~~~~~~~~~~~~~~~--~~v~~--~~~~f~~~~l~--~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
+|+.++.+++.++++++ +++|+ ++.+|++.|+| +..|+++++++++ ++.|+.|.+.
T Consensus 799 --~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~~~~~~~~--~~~e~~k~~~ 860 (867)
T TIGR01524 799 --QSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLIAILVGYM--ATMQLVKTFY 860 (867)
T ss_pred --cchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 57777777777766654 44565 48899999884 5567777666664 6788888653
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-116 Score=957.67 Aligned_cols=818 Identities=31% Similarity=0.430 Sum_probs=699.2
Q ss_pred HHHHHHHHHHHHHhhccc-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhcCCeeEEEECCeEEEEe
Q 003127 4 MILAVCALVSLVVGIATE-GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR---EKKKITVQVARNGFRRKIS 79 (845)
Q Consensus 4 ~il~~~a~ls~~~~~~~~-~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~V~r~g~~~~i~ 79 (845)
++++++|+++++.+..+. .....-.+.....+.+..+++++....|.|+.+..+..+ ...+..++|+|||+.+.+.
T Consensus 98 ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~ 177 (1019)
T KOG0203|consen 98 ILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTIN 177 (1019)
T ss_pred HHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEec
Confidence 678899999988766441 111122233333333445555666666666655555443 3557889999999999999
Q ss_pred cCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccC---------CCCeEEeccEEEeceEEEEEEEE
Q 003127 80 IYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNA---------LNPFLLSGTKVQNGSCKMLVTTV 150 (845)
Q Consensus 80 ~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~---------~~~~v~~Gt~v~~g~~~~~V~~t 150 (845)
.+|||+||+|.++.||+||||.+++++.+|++|+|+|||||+|.++.+ ..|+-|.+|.+++|.++++|++|
T Consensus 178 ~eelVvGD~v~vk~GdrVPADiRiis~~g~~vdnsslTGesEP~~~~~~~t~~~~~Et~Ni~f~st~~veG~~~givi~t 257 (1019)
T KOG0203|consen 178 AEELVVGDLVEVKGGDRVPADIRIISATGCKVDNSSLTGESEPQTRSPEFTHENPLETRNIAFFSTNCVEGTGRGIVIAT 257 (1019)
T ss_pred hhhcccccceeeccCCcccceeEEEEecceeEeccccccccCCccCCccccccCchhheeeeeeeeEEecceEEEEEEec
Confidence 999999999999999999999999999999999999999999998752 35678999999999999999999
Q ss_pred eecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHH
Q 003127 151 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 230 (845)
Q Consensus 151 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (845)
|.+|.+|+++.+....+..++|+++.++++.+++...++..++..|++.+.. ++ .+...+.+
T Consensus 258 Gd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~--------gy----------~~l~avv~ 319 (1019)
T KOG0203|consen 258 GDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALIL--------GY----------EWLRAVVF 319 (1019)
T ss_pred CCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhh--------cc----------hhHHHhhh
Confidence 9999999999998888888999999999999999888888777777553321 11 46777777
Q ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCC
Q 003127 231 AVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS 310 (845)
Q Consensus 231 ~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~ 310 (845)
.++++++.+|+||+..++.++....++|+++++++||+++.|+||+.++||+|||||||+|.|+|.++|.++.....+..
T Consensus 320 ~i~iivAnvPeGL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~ 399 (1019)
T KOG0203|consen 320 LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTT 399 (1019)
T ss_pred hheeEEecCcCCccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeech
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999988776654
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCC
Q 003127 311 KGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFN 386 (845)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~ 386 (845)
...........+.....+..+..+|+.+.....+.+ +....|++.|.||++++...-.+....++.++.+...||+
T Consensus 400 ~~~~~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~kv~eipfN 479 (1019)
T KOG0203|consen 400 EDQSGQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPKVAEIPFN 479 (1019)
T ss_pred hhhhcccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHHhhcCCcc
Confidence 333332333335667778888999999888766554 3345899999999999988877778888999999999999
Q ss_pred CCCceEEEEEEcCC---CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCC
Q 003127 387 SVKKQMGVVIELPE---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN 463 (845)
Q Consensus 387 s~~k~~sviv~~~~---~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~ 463 (845)
|.+|+.-.+.+..+ .++.+.+|||||.++++|+.+.. +|+..|++++.++.+++...++...|.||++||++.+++
T Consensus 480 St~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~f~~ay~~lg~~GerVlgF~~~~l~~ 558 (1019)
T KOG0203|consen 480 STNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEAFQEAYLELGGLGERVLGFCDLELPD 558 (1019)
T ss_pred cccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHHHHHHHHHhhhcchHHHHHHHHhcch
Confidence 99999999998654 47888999999999999998764 788889999999999999999999999999999999986
Q ss_pred CC--------CCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc----
Q 003127 464 EF--------SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG---- 531 (845)
Q Consensus 464 ~~--------~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~---- 531 (845)
+. .+..+....|+.|+|++++-||+|..+++++.+||.+||+++|+|||++.||+++|++.||...+.
T Consensus 559 ~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e 638 (1019)
T KOG0203|consen 559 EKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVE 638 (1019)
T ss_pred hcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhh
Confidence 51 223355677899999999999999999999999999999999999999999999999999765322
Q ss_pred --------------------eeeeCcccccCCHHHHhhhcCCe--eEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccC
Q 003127 532 --------------------IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTND 589 (845)
Q Consensus 532 --------------------~~i~g~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND 589 (845)
.+++|.++.+++.+++++++.+. .||||.+|+||..+|+.+|+. |+.|+++|||.||
T Consensus 639 ~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaVTGDGVND 717 (1019)
T KOG0203|consen 639 DIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDGVND 717 (1019)
T ss_pred hhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEEeCCCcCC
Confidence 67899999999999999988443 599999999999999999998 9999999999999
Q ss_pred HHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 003127 590 APALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAP 669 (845)
Q Consensus 590 ~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~ 669 (845)
.||||+||+|||||.+|+|.+|++||++++||||.+++..+++||.+|+|+||.+.|.++.|+..+.+.++|.+++.|+|
T Consensus 718 sPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi~~giPLp 797 (1019)
T KOG0203|consen 718 SPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFILFGIPLP 797 (1019)
T ss_pred ChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCC-CCCCCcCHHHHHH-HHHHHHHHHHHHHHHHHhcc--ccc---
Q 003127 670 LTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVG-RKGNFISNVMWRN-ILGQSLYQFLIIWYLQTRGK--AVF--- 742 (845)
Q Consensus 670 l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~--- 742 (845)
+.++++|.+++.+|+.|+++|++|+|+.|+|+|+|++ ++++++|.+++.. ....+.+|++..|+-||... ..|
T Consensus 798 lgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~ 877 (1019)
T KOG0203|consen 798 LGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPR 877 (1019)
T ss_pred cchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH
Confidence 9999999999999999999999999999999999997 7789999887644 34447888877776554211 111
Q ss_pred ---cCC---------------CC--------CccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHHHHH
Q 003127 743 ---RLD---------------GP--------DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTC 796 (845)
Q Consensus 743 ---~~~---------------~~--------~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~ 796 (845)
+++ |. ......+|..|.+++++|++++++|+ +++-++|++-++||+++++++.
T Consensus 878 ~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~K-TRRnSlfqqGmrN~vl~f~v~~ 956 (1019)
T KOG0203|consen 878 TLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICK-TRRNSIFQQGMRNKVLIFAVIF 956 (1019)
T ss_pred HHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhh-cchhHHHHhhhhhhhHHHHHHH
Confidence 100 10 01125688999999999999999999 6788899877999999999998
Q ss_pred HHHHHH--HHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 797 TVLFQI--IIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 797 ~~~~~~--~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
..++.+ .++|.....+++.|++|.||+..++++++.|+++|+.|++
T Consensus 957 e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~ 1004 (1019)
T KOG0203|consen 957 ETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLF 1004 (1019)
T ss_pred HHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHh
Confidence 877743 3457788999999999999999999999999999999965
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-106 Score=953.96 Aligned_cols=703 Identities=23% Similarity=0.359 Sum_probs=582.1
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
+.++|++++++|+++| .|.++..+++.+++...++.+++++.++..+++.+. .+.+++|+|||++++|+++
T Consensus 38 ~~~lL~~aa~~s~~~~--------~~~~~~~i~~~~~i~~~i~~~qe~~a~~~~~~L~~~-~~~~~~V~Rdg~~~~I~~~ 108 (755)
T TIGR01647 38 LSWVMEAAAIIAIALE--------NWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQS-LAPKARVLRDGKWQEIPAS 108 (755)
T ss_pred HHHHHHHHHHHHHhhc--------chhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCEEEEEEhh
Confidence 4578999999999998 688988888888888888888888888888888754 4678999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHH
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMA 161 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 161 (845)
||+|||+|.+++||+|||||++++|+++.||||+|||||.|+.|..+ +.+|+||.+.+|+++++|++||.+|++||+.+
T Consensus 109 ~Lv~GDiV~l~~Gd~IPaDg~vi~g~~~~VDeS~LTGES~PV~K~~~-~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~ 187 (755)
T TIGR01647 109 ELVPGDVVRLKIGDIVPADCRLFEGDYIQVDQAALTGESLPVTKKTG-DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAA 187 (755)
T ss_pred hCcCCCEEEECCCCEEeceEEEEecCceEEEcccccCCccceEeccC-CeeeccCEEEccEEEEEEEEcCCccHHHHHHH
Confidence 99999999999999999999999998789999999999999999764 56999999999999999999999999999999
Q ss_pred hhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCC
Q 003127 162 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241 (845)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~ 241 (845)
.+.+.+.+++|+|+.++++++++.++++++++++++++... . +. ++...+.+++++++++|||
T Consensus 188 lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~--~-----~~----------~~~~~~~~~i~vlv~a~P~ 250 (755)
T TIGR01647 188 LVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFG--R-----GE----------SFREGLQFALVLLVGGIPI 250 (755)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--c-----CC----------CHHHHHHHHHHHHHHhCCc
Confidence 99988888899999999999999888777776666543220 0 11 3567788899999999999
Q ss_pred chHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCC
Q 003127 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIP 321 (845)
Q Consensus 242 ~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (845)
+||++++++++.+.++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..++.+ .
T Consensus 251 ~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~---------------~ 315 (755)
T TIGR01647 251 AMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF---------------D 315 (755)
T ss_pred chHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC---------------C
Confidence 9999999999999999999999999999999999999999999999999999999987643210 0
Q ss_pred hhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCC-
Q 003127 322 ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE- 400 (845)
Q Consensus 322 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~- 400 (845)
..+.+..+.++|. ...+||.|.|+++++.+.+ ..+..+++++.+||++.+|+|+++++.++
T Consensus 316 --~~~~l~~a~~~~~------------~~~~~pi~~Ai~~~~~~~~----~~~~~~~~~~~~pf~~~~k~~~~~v~~~~~ 377 (755)
T TIGR01647 316 --KDDVLLYAALASR------------EEDQDAIDTAVLGSAKDLK----EARDGYKVLEFVPFDPVDKRTEATVEDPET 377 (755)
T ss_pred --HHHHHHHHHHhCC------------CCCCChHHHHHHHHHHHhH----HHHhcCceEEEeccCCCCCeEEEEEEeCCC
Confidence 1123333332221 1157999999999887543 23345788899999999999999998654
Q ss_pred CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEE
Q 003127 401 GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480 (845)
Q Consensus 401 ~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG 480 (845)
++.+.++||+||.+++.|+.. ++.++++++..++++++|+|++++|||+ .|++++|+|
T Consensus 378 g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~-----------~e~~l~~~G 435 (755)
T TIGR01647 378 GKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD-----------EEGRWHFLG 435 (755)
T ss_pred ceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc-----------CCCCcEEEE
Confidence 667788999999999999741 2345678888999999999999999972 256899999
Q ss_pred EeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhcCCeeEE
Q 003127 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM 557 (845)
Q Consensus 481 ~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~---~~~~i~g~~~~~~~~~~~~~~~~~~~v~ 557 (845)
+++++||+||+++++|++||++|++++|+|||++.+|.++|+++|+..+ ...+.+|++.+.++++++.+.+.+..+|
T Consensus 436 li~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vf 515 (755)
T TIGR01647 436 LLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTADVLLKGDNRDDLPSGELGEMVEDADGF 515 (755)
T ss_pred EeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHhCCEE
Confidence 9999999999999999999999999999999999999999999999753 1234455556678888899999999999
Q ss_pred EEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHH
Q 003127 558 ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 637 (845)
Q Consensus 558 ~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~ 637 (845)
+|++|+||.++|+.+|++ |+.|+|+|||.||+|+|++|||||||| +|+|.||++||+++.+|++..+.+++++||++|
T Consensus 516 Ar~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDapAL~~AdVGIAm~-~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~ 593 (755)
T TIGR01647 516 AEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDAPALKKADVGIAVA-GATDAARSAADIVLTEPGLSVIVDAILESRKIF 593 (755)
T ss_pred EecCHHHHHHHHHHHHhc-CCEEEEEcCCcccHHHHHhCCeeEEec-CCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHH
Confidence 999999999999999998 999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHH
Q 003127 638 INIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMW 717 (845)
Q Consensus 638 ~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 717 (845)
+|+++++.|.++.|+..+++.++..++.+ .|++|+|++|+|+++|. |++++++|++++. ++|+.+. ++ .++
T Consensus 594 ~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p~~~~---~~-~~~ 664 (755)
T TIGR01647 594 QRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLPQRWN---LR-EVF 664 (755)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCCCccc---hH-HHH
Confidence 99999999999999998877666555444 45999999999999996 6999999998753 4554443 33 555
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc---cccCCCC-CccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHH
Q 003127 718 RNILGQSLYQFLIIWYLQTRGKA---VFRLDGP-DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAV 793 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 793 (845)
..++..|++.++..+.+++.... ++...+. ......+|++|.+++++|+++++++|+ ++. +|+. .+++++..+
T Consensus 665 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~r~-~~~-~~~~-~p~~~l~~~ 741 (755)
T TIGR01647 665 TMSTVLGIYLVISTFLLLAIALDTSFFIDKFGLQLLHGNLQSLIYLQVSISGQATIFVTRT-HGF-FWSE-RPGKLLFIA 741 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccchhcccccccHhhhHHHHHHHHHHHHHHHHheecc-CCC-Cccc-CCcHHHHHH
Confidence 55555666666544433322111 1111111 112357899999999999999999994 343 4443 366666666
Q ss_pred HHHHHHH
Q 003127 794 LTCTVLF 800 (845)
Q Consensus 794 ~~~~~~~ 800 (845)
.++..++
T Consensus 742 ~~~~~~~ 748 (755)
T TIGR01647 742 FVIAQII 748 (755)
T ss_pred HHHHHHH
Confidence 6655555
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-106 Score=984.29 Aligned_cols=740 Identities=23% Similarity=0.307 Sum_probs=583.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEc--CCCeeeccEEE
Q 003127 26 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLC--MGDQVPADGLF 103 (845)
Q Consensus 26 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~--~G~~iPaD~~l 103 (845)
.|.+++.+++.+++...++..++.+..++++++. .++..++|+|||++++|+++||+|||+|.++ +|++|||||+|
T Consensus 192 ~~~~~~~i~~i~~~~~~~~~~~~~k~~~~L~~~~--~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~l 269 (1054)
T TIGR01657 192 YYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMV--HKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVL 269 (1054)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEE
Confidence 4788877776666665555555554444444432 2456899999999999999999999999999 99999999999
Q ss_pred EeeCceeEecccCCCCCCcccccCC-----------------CCeEEeccEEEe-------ceEEEEEEEEeecchhhHH
Q 003127 104 VSGFSVLINESSLTGESEPVNVNAL-----------------NPFLLSGTKVQN-------GSCKMLVTTVGMRTQWGKL 159 (845)
Q Consensus 104 l~~~~~~Vdes~LtGEs~p~~k~~~-----------------~~~v~~Gt~v~~-------g~~~~~V~~tG~~T~~g~i 159 (845)
++|+ |.||||+|||||.|+.|.+. ++++|+||.+.+ |.+.++|++||.+|..|++
T Consensus 270 l~g~-~~VdES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i 348 (1054)
T TIGR01657 270 LSGS-CIVNESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQL 348 (1054)
T ss_pred EeCc-EEEecccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHH
Confidence 9995 89999999999999999631 347999999995 7899999999999999999
Q ss_pred HHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhc
Q 003127 160 MATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 239 (845)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 239 (845)
.+.+..+++..+++++...++...+..++++. +++++..... .+. ++...+..+++++++++
T Consensus 349 ~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~----~i~~~~~~~~----~~~----------~~~~~~l~~l~iiv~~v 410 (1054)
T TIGR01657 349 VRSILYPKPRVFKFYKDSFKFILFLAVLALIG----FIYTIIELIK----DGR----------PLGKIILRSLDIITIVV 410 (1054)
T ss_pred HHHhhCCCCCCCchHHHHHHHHHHHHHHHHHH----HHHHHHHHHH----cCC----------cHHHHHHHHHHHHHhhc
Confidence 99998888888999988877765554433222 2211111111 111 45677888999999999
Q ss_pred CCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCC
Q 003127 240 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 319 (845)
Q Consensus 240 P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 319 (845)
|++||++++++++.++.+|+|+|++||+++++|.+|++|++|||||||||+|+|+|.+++..+.....+... ..
T Consensus 411 P~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~-----~~- 484 (1054)
T TIGR01657 411 PPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIV-----TE- 484 (1054)
T ss_pred CchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccccc-----cc-
Confidence 999999999999999999999999999999999999999999999999999999999998654321110000 00
Q ss_pred CChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCC-----hHH----------hhhhcceEEEec
Q 003127 320 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGD-----FQA----------ERQASKIVKVEP 384 (845)
Q Consensus 320 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~-----~~~----------~~~~~~~l~~~~ 384 (845)
........+..++..||+..... + ...|||+|.|+++++...... ... ....+++++.+|
T Consensus 485 ~~~~~~~~~~~~~a~C~~~~~~~---~--~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~p 559 (1054)
T TIGR01657 485 DSSLKPSITHKALATCHSLTKLE---G--KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQ 559 (1054)
T ss_pred ccccCchHHHHHHHhCCeeEEEC---C--EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEe
Confidence 00011223445667888765432 1 468999999999986321100 000 024678899999
Q ss_pred CCCCCceEEEEEEcCC-CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCC
Q 003127 385 FNSVKKQMGVVIELPE-GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGN 463 (845)
Q Consensus 385 F~s~~k~~sviv~~~~-~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~ 463 (845)
|+|++||||++++.++ +++++++|||||.|+++|+.. ..++.+.+..++|+++|+||+++|||++++
T Consensus 560 F~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a~~G~RVLalA~k~l~~ 627 (1054)
T TIGR01657 560 FSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYTREGYRVLALAYKELPK 627 (1054)
T ss_pred ecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHHhcCCEEEEEEEeecCc
Confidence 9999999999999754 567899999999999999741 113567888999999999999999999874
Q ss_pred CC-----CCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc-------
Q 003127 464 EF-----SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------- 531 (845)
Q Consensus 464 ~~-----~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~------- 531 (845)
.. +..++.+|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++|+..++.
T Consensus 628 ~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~ 707 (1054)
T TIGR01657 628 LTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLILAEA 707 (1054)
T ss_pred cchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEEEeec
Confidence 31 123456789999999999999999999999999999999999999999999999999999975432
Q ss_pred ----------------------------------------------eeeeCccccc---CCHHHHhhhcCCeeEEEEeCh
Q 003127 532 ----------------------------------------------IAIEGPEFRE---KSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 532 ----------------------------------------------~~i~g~~~~~---~~~~~~~~~~~~~~v~~~~~p 562 (845)
.+++|+++.. +.++++.+.+.+..||||++|
T Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP 787 (1054)
T TIGR01657 708 EPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAP 787 (1054)
T ss_pred ccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCH
Confidence 3555555543 344667788889999999999
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 642 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~ 642 (845)
+||.++|+.+|+. |+.|+|+|||+||+||||+|||||||| ++ | |..+||+++.+++++++.+++++||+++.|+++
T Consensus 788 ~qK~~iV~~lq~~-g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~ 863 (1054)
T TIGR01657 788 DQKETLVELLQKL-DYTVGMCGDGANDCGALKQADVGISLS-EA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTSFQ 863 (1054)
T ss_pred HHHHHHHHHHHhC-CCeEEEEeCChHHHHHHHhcCcceeec-cc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 999999999999999999999999999 43 3 558999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHH
Q 003127 643 FVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILG 722 (845)
Q Consensus 643 ~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 722 (845)
+++|.+.+++...+...+ ++..+.|++++|++|+|++++.+|+++++.++|.+++|+++| .++++++.++.++++
T Consensus 864 ~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P---~~~l~~~~~~~si~~ 938 (1054)
T TIGR01657 864 MFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP---PSNLFSVYILTSVLI 938 (1054)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC---CccccCHHHHHHHHH
Confidence 999999999887555432 233458999999999999999999999999999999999999 468999999999999
Q ss_pred HHHHHHHHHHHHHHhcc--cccc------CCCCCccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHHH
Q 003127 723 QSLYQFLIIWYLQTRGK--AVFR------LDGPDPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVL 794 (845)
Q Consensus 723 ~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~ 794 (845)
+++++.++.++.++... .++. .+.........|++| .++.+|.+..+.+++. ..++.+++++|++++.++
T Consensus 939 q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf~~~~~~N~~~~~~~ 1016 (1054)
T TIGR01657 939 QFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPFREPIYKNKPFVYLL 1016 (1054)
T ss_pred HHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcC-CcchhhhHHHhHHHHHHH
Confidence 99998887766554322 1110 001112224468888 4555566666777743 445556888999998888
Q ss_pred HHHHHHHHH----HHHHhhhcccccCCChH
Q 003127 795 TCTVLFQII----IIELLGTFANTTPLNLQ 820 (845)
Q Consensus 795 ~~~~~~~~~----~v~~~~~~f~~~~l~~~ 820 (845)
++.+++++. ++|+++.+|+++|++..
T Consensus 1017 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1046 (1054)
T TIGR01657 1017 ITGLGLLLVLLLDPHPLLGKILQIVPLPQE 1046 (1054)
T ss_pred HHHHHHHHHhhhCCCHHHHhhheeeeCCHH
Confidence 777665431 35788999999999853
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-104 Score=974.29 Aligned_cols=802 Identities=23% Similarity=0.314 Sum_probs=618.2
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEEC-CeEEEEecC
Q 003127 3 LMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARN-GFRRKISIY 81 (845)
Q Consensus 3 ~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~-g~~~~i~~~ 81 (845)
-+++++.+++++++.+.+ .++.+.++|+++++.+++++++.+++++++.++..++.+++|+|| |++++++|+
T Consensus 30 N~yfl~i~ilq~ip~~s~-------~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~~~n~~~~~v~~~~~~~~~i~~~ 102 (1057)
T TIGR01652 30 NLYFLVVALLQQVPILSP-------TYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWK 102 (1057)
T ss_pred hHHHHHHHHHHcCCCcCC-------CCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHHHHhCcEEEEECCCCcEEEeeee
Confidence 367889999999987632 345667889999999999999999999999999999999999997 899999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCc----eeEecccCCCCCCcccccC------------------------------
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNA------------------------------ 127 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~----~~Vdes~LtGEs~p~~k~~------------------------------ 127 (845)
||+|||+|.+++||+||||++++++++ |+||||+|||||+|+.|..
T Consensus 103 ~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~ 182 (1057)
T TIGR01652 103 DLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKMLDEDDIKNFSGEIECEQPNASLY 182 (1057)
T ss_pred cccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccCChhhHhhceEEEEEcCCCCcce
Confidence 999999999999999999999999765 9999999999999998842
Q ss_pred -----------------CCCeEEeccEEEe-ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHH
Q 003127 128 -----------------LNPFLLSGTKVQN-GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGL 189 (845)
Q Consensus 128 -----------------~~~~v~~Gt~v~~-g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 189 (845)
.+|++++||.+.+ |++.|+|++||++|++ .++...++.++++++++++++..++..+.+
T Consensus 183 ~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~---~~n~~~~~~k~s~le~~ln~~~~~l~~~~i 259 (1057)
T TIGR01652 183 SFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKL---MRNATQAPSKRSRLEKELNFLIIILFCLLF 259 (1057)
T ss_pred EEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhh---hhcCCCCcccccHHHHHHhhHHHHHHHHHH
Confidence 1256899999999 9999999999999965 445666777889999999999888777666
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCccccC-----CCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHH------HHH
Q 003127 190 FFAVVTFAVMVQGLFTRKLQEGTHWTWS-----GDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAM------KKM 258 (845)
Q Consensus 190 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~------~~l 258 (845)
+++++++++. .++........|+.. .+....+...+..++.++..++|++|++.++++...++ .+|
T Consensus 260 ~l~~i~~i~~---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m 336 (1057)
T TIGR01652 260 VLCLISSVGA---GIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQM 336 (1057)
T ss_pred HHHHHHHHHH---HheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhh
Confidence 6665554432 111110001011110 01122344466778888999999999999999999988 778
Q ss_pred hcC----CceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCC-------CCC-----C----CC-
Q 003127 259 MND----KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK-------GTP-----A----FG- 317 (845)
Q Consensus 259 ~~~----~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~-------~~~-----~----~~- 317 (845)
.++ ++.+|+++++|+||++++||+|||||||+|+|+++++++++..|..+... ... . ..
T Consensus 337 ~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (1057)
T TIGR01652 337 YHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAIRERLGSYVENENSMLVES 416 (1057)
T ss_pred hccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHhhhcccccccccccccccc
Confidence 764 59999999999999999999999999999999999999998877522110 000 0 00
Q ss_pred ----------------CCCChhHHHHHHHHHHhcCCceEEecCCC---ceEEcCCchHHHHHHHHHHcCCChHH------
Q 003127 318 ----------------SSIPASASKLLLQSIFNNTGGEVVIGEGN---KTEILGTPTETAILEFGLLLGGDFQA------ 372 (845)
Q Consensus 318 ----------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~p~e~al~~~~~~~~~~~~~------ 372 (845)
.....+....+..++.+||++....++++ ..+..+||+|.|++++|+..|+.+..
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~ 496 (1057)
T TIGR01652 417 KGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAALVKAARDVGFVFFERTPKSI 496 (1057)
T ss_pred cccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHHHHHHHHHCCCEEEEecCCce
Confidence 00001123345667888998776642222 23447999999999999999876542
Q ss_pred --------hhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHH
Q 003127 373 --------ERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIE 444 (845)
Q Consensus 373 --------~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (845)
....+++++.+||+|+|||||++++.+++++++++||||+.|+++|++ .+++.++++.+.++
T Consensus 497 ~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~il~~~~~----------~~~~~~~~~~~~~~ 566 (1057)
T TIGR01652 497 SLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKRLSS----------GGNQVNEETKEHLE 566 (1057)
T ss_pred EEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHHHHHHhhc----------cchhHHHHHHHHHH
Confidence 224688999999999999999999988888999999999999999974 12345677889999
Q ss_pred HHHHhhchhhhheeeecCCCCC---------------C-------CCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHc
Q 003127 445 KFASEALRTLCLACMEIGNEFS---------------A-------DAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSA 502 (845)
Q Consensus 445 ~~~~~G~r~l~~a~~~i~~~~~---------------~-------~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~ 502 (845)
+|+++|+||+++|||.+++++- . ..+.+|+|++|+|+++++||+|++++++|++|+++
T Consensus 567 ~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~A 646 (1057)
T TIGR01652 567 NYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQA 646 (1057)
T ss_pred HHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHC
Confidence 9999999999999999976410 0 01347899999999999999999999999999999
Q ss_pred CCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------------------------eeeeCccccc
Q 003127 503 GITVRMVTGDNINTAKAIARECGILTDNG-----------------------------------------IAIEGPEFRE 541 (845)
Q Consensus 503 Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~-----------------------------------------~~i~g~~~~~ 541 (845)
||++||+|||+.+||.++|+++|+..++. .+++|+++..
T Consensus 647 GIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~ 726 (1057)
T TIGR01652 647 GIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGY 726 (1057)
T ss_pred CCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHH
Confidence 99999999999999999999999986542 2566666553
Q ss_pred CCHH----HHhhhcC--CeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcH--HHHhc
Q 003127 542 KSDE----ELSKLIP--KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKES 613 (845)
Q Consensus 542 ~~~~----~~~~~~~--~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~--~ak~~ 613 (845)
+.++ ++.+++. +..|+||++|+||+++|+.+|+..|+.|+|+|||.||++||++|||||++ .|+| .|+.+
T Consensus 727 ~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi--~g~eg~qA~~a 804 (1057)
T TIGR01652 727 ALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI--SGKEGMQAVMA 804 (1057)
T ss_pred HHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe--cChHHHHHHHh
Confidence 3322 2333443 44599999999999999999987689999999999999999999999965 4666 48999
Q ss_pred cCEEeccCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CChhhHHHHHHHHHHHHHhhhh
Q 003127 614 ADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN---APLTAVQLLWVNMIMDTLGALA 689 (845)
Q Consensus 614 ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~---~~l~~~~~l~~~~~~~~~p~~~ 689 (845)
||+++.+ |..+.+++ .|||++|+|+++++.|.+++|++.+++++++.+++++ +++++++++|+|+++|.+|+++
T Consensus 805 aD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~ 882 (1057)
T TIGR01652 805 SDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVIS 882 (1057)
T ss_pred hhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999986 99999987 8999999999999999999999999999999887654 5789999999999999999999
Q ss_pred hcc--CCCCcccccCCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcc---ccccCCCCC-ccchhhhHHHH
Q 003127 690 LAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGK---AVFRLDGPD-PDLILNTLIFN 759 (845)
Q Consensus 690 l~~--~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~t~~f~ 759 (845)
+|. +++++++|.++|+ .+++++++++.+..|++.+++|+++++++.+... ... .+|.. ......+..|.
T Consensus 883 l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~ 961 (1057)
T TIGR01652 883 LGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFV-SSGSLDDFSSVGVIVFT 961 (1057)
T ss_pred HHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc-cCCcccchhhHHHHHHH
Confidence 975 6777889999997 5677888988888899999999998876643221 111 13331 12344566666
Q ss_pred HHHHHHHhcccccccccccccccCCchhHHHHHHHHHHHHHHHHHHHHhhhcc---------cccCCChHHHHHHHHHHH
Q 003127 760 TFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFA---------NTTPLNLQQWFVSILLGF 830 (845)
Q Consensus 760 ~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~f---------~~~~l~~~~w~~~~~~~~ 830 (845)
++++...+.+...- . .| +++.++++++++++.+++....+..+ ...--++.+|+.++++.+
T Consensus 962 ~~~~~~~~~~~~~~--~---~w-----t~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~ 1031 (1057)
T TIGR01652 962 ALVVIVNLKIALEI--N---RW-----NWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVL 1031 (1057)
T ss_pred HHHHHHHHHHHHHH--h---Hh-----HHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHH
Confidence 66665544332211 1 11 12333444444444333222222111 111235889999999999
Q ss_pred HHHHHHHHHhhc
Q 003127 831 LGMPIAAVLKLI 842 (845)
Q Consensus 831 ~~~~~~~i~K~~ 842 (845)
+.++++.++|.+
T Consensus 1032 ~~l~p~~~~~~~ 1043 (1057)
T TIGR01652 1032 ISLLPRFTYKAI 1043 (1057)
T ss_pred HHHHHHHHHHHH
Confidence 999888888865
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-100 Score=927.20 Aligned_cols=799 Identities=20% Similarity=0.279 Sum_probs=596.2
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCc
Q 003127 4 MILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDL 83 (845)
Q Consensus 4 ~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l 83 (845)
+.+++.+++.+++.+. +..+.+.++||++++++++++++.+++++++.++..|+++++|+|+|++++++|++|
T Consensus 117 ~YFL~I~ilq~ip~~s-------~~~~~t~~~PL~~vl~v~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i 189 (1178)
T PLN03190 117 IYFLVIAVLNQLPQLA-------VFGRGASILPLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDI 189 (1178)
T ss_pred HHHHHHHHHHhCCCcc-------cCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHC
Confidence 4677888888887653 333566788999999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEcCCCeeeccEEEEeeCc----eeEecccCCCCCCcccccC--------------------------------
Q 003127 84 LPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVNA-------------------------------- 127 (845)
Q Consensus 84 ~~GDii~l~~G~~iPaD~~ll~~~~----~~Vdes~LtGEs~p~~k~~-------------------------------- 127 (845)
+|||+|++++||++|||++++++++ |+||||+|||||+|+.|..
T Consensus 190 ~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G 269 (1178)
T PLN03190 190 RVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQA 269 (1178)
T ss_pred CCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEecccchhhhcchhhhhceEEEEEeCCCccceeEEE
Confidence 9999999999999999999999654 8999999999999998831
Q ss_pred ------------CCCeEEeccEEEec-eEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 003127 128 ------------LNPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVV 194 (845)
Q Consensus 128 ------------~~~~v~~Gt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 194 (845)
.+|++++||.+.+. .++|+|++||++| |++.+...++.|.+++++++|++...+..+.+++|++
T Consensus 270 ~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dT---K~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i 346 (1178)
T PLN03190 270 NMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRET---KAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTI 346 (1178)
T ss_pred EEEECCCcccCCccceeeccceecCCceEEEEEEEechhh---hHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHH
Confidence 13467888888875 6999999999999 5777777777889999999999988877776666665
Q ss_pred HHHHHHHHHHHhhcc-CCCccccCCC---------C--h----HHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHH
Q 003127 195 TFAVMVQGLFTRKLQ-EGTHWTWSGD---------D--A----LEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKM 258 (845)
Q Consensus 195 ~~~~~~~~~~~~~~~-~~~~~~~~~~---------~--~----~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l 258 (845)
+.++.. .+..... ...+..|+.. . . ...+..|...+.++...+|.+|++.+.+........+
T Consensus 347 ~~i~~~--~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I 424 (1178)
T PLN03190 347 VSVCAA--VWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFM 424 (1178)
T ss_pred HHHHHH--hhhccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHH
Confidence 544321 1111100 0001111110 0 0 1112233344556668899999999999997756555
Q ss_pred hcC----------CceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCC-------------C---
Q 003127 259 MND----------KALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSK-------------G--- 312 (845)
Q Consensus 259 ~~~----------~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~-------------~--- 312 (845)
.++ ++.+|+.+.+|+||+|++||+|||||||+|+|+++++++++..|+.+... .
T Consensus 425 ~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~ 504 (1178)
T PLN03190 425 IRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKIL 504 (1178)
T ss_pred HhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhhhccccccccccc
Confidence 443 37899999999999999999999999999999999999988776421100 0
Q ss_pred CCCCCC------------CCC---hhHHHHHHHHHHhcCCceEEecCC--C-----ceEEcCCchHHHHHHHHHHcCCC-
Q 003127 313 TPAFGS------------SIP---ASASKLLLQSIFNNTGGEVVIGEG--N-----KTEILGTPTETAILEFGLLLGGD- 369 (845)
Q Consensus 313 ~~~~~~------------~~~---~~~~~~l~~~~~~~~~~~~~~~~~--~-----~~~~~~~p~e~al~~~~~~~~~~- 369 (845)
.+.... ... ......+..++.+||++.....++ + ..+..+||+|.||+++|++.|+.
T Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l 584 (1178)
T PLN03190 505 RPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFML 584 (1178)
T ss_pred cccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeE
Confidence 000000 000 011234667788899887642111 1 12456799999999999999973
Q ss_pred -----------hHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHH
Q 003127 370 -----------FQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNH 438 (845)
Q Consensus 370 -----------~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~ 438 (845)
....+..+++++.+||+|+|||||++++.+++++.+|+||||+.|+++|++.. +++.++.
T Consensus 585 ~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~---------~~~~~~~ 655 (1178)
T PLN03190 585 IERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL---------NMNVIRA 655 (1178)
T ss_pred ecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccc---------cchhHHH
Confidence 33445689999999999999999999998888899999999999999997532 2234567
Q ss_pred HHHHHHHHHHhhchhhhheeeecCCCCC----------------------CCCCCCCCceEEEEEeeecCCCChhHHHHH
Q 003127 439 LNETIEKFASEALRTLCLACMEIGNEFS----------------------ADAPIPTEGYTCIGIVGIKDPMRPGVKESV 496 (845)
Q Consensus 439 ~~~~~~~~~~~G~r~l~~a~~~i~~~~~----------------------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I 496 (845)
+.+.+++|+++|+|||++|||+++++.- ...+.+|+|++++|+++++|++|++++++|
T Consensus 656 ~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I 735 (1178)
T PLN03190 656 TEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAI 735 (1178)
T ss_pred HHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHH
Confidence 8889999999999999999999975310 011457899999999999999999999999
Q ss_pred HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc---------------------------------------------
Q 003127 497 AICRSAGITVRMVTGDNINTAKAIARECGILTDNG--------------------------------------------- 531 (845)
Q Consensus 497 ~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--------------------------------------------- 531 (845)
++|+++|+++||+|||+.+||.++|+++|+.+++.
T Consensus 736 ~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1178)
T PLN03190 736 ESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAAS 815 (1178)
T ss_pred HHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccC
Confidence 99999999999999999999999999999975542
Q ss_pred ----eeeeCcccccCCH----HHHhhhcC--CeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 532 ----IAIEGPEFREKSD----EELSKLIP--KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 532 ----~~i~g~~~~~~~~----~~~~~~~~--~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
.+++|..+..+.+ +.+.++.. +..++||++|.||+++|+.+|+..++.|+|+|||+||++||++|||||
T Consensus 816 ~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI- 894 (1178)
T PLN03190 816 DPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV- 894 (1178)
T ss_pred CceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee-
Confidence 3445554444332 23444443 445899999999999999999874589999999999999999999999
Q ss_pred eCCCCcH--HHHhccCEEeccCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC---ChhhHHH
Q 003127 602 MGIAGTE--VAKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNA---PLTAVQL 675 (845)
Q Consensus 602 mg~~~~~--~ak~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~---~l~~~~~ 675 (845)
|..|+| .|+.+||+++.+ |..+.++| .|||++|.|+.+.+.|.+|+|+++.+++++|.++++++ .++++.+
T Consensus 895 -GIsG~EG~qA~~aSDfaI~~--Fr~L~rLLlvHGr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~ 971 (1178)
T PLN03190 895 -GISGQEGRQAVMASDFAMGQ--FRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSS 971 (1178)
T ss_pred -eecCchhHHHHHhhccchhh--hHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 667888 589999999987 99999985 79999999999999999999999999999999988775 4578899
Q ss_pred HHHHHHHHHHhhhhhcc--CCCCcccccCCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCc
Q 003127 676 LWVNMIMDTLGALALAT--EPPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDP 749 (845)
Q Consensus 676 l~~~~~~~~~p~~~l~~--~~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 749 (845)
.+||+++|++|+++++. ++..++.+.+.|. .++...++.+.|..|++.|++|++++|++.+........++.
T Consensus 972 ~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~~~~~~~~~~-- 1049 (1178)
T PLN03190 972 VLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFAYWASTIDGS-- 1049 (1178)
T ss_pred HHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCce--
Confidence 99999999999999874 4444555666673 345678888888889999999999888765432111111211
Q ss_pred cchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHHHHHHHHHHHHHH------HHhh---hcccccCCChH
Q 003127 750 DLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIII------ELLG---TFANTTPLNLQ 820 (845)
Q Consensus 750 ~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v------~~~~---~~f~~~~l~~~ 820 (845)
...++.+.+.++...+.+.. . ++. | +++-++++++++++.+++. +... .++. .--++.
T Consensus 1050 --~~~~~~~~~~v~~vnl~i~~-~-~~~---w-----t~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~ 1116 (1178)
T PLN03190 1050 --SIGDLWTLAVVILVNLHLAM-D-IIR---W-----NWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFH-IAKTGS 1116 (1178)
T ss_pred --eEhHhhhhHHHHHHHHHHHH-H-Hhh---h-----hHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHH-HhccHH
Confidence 12233333333333222211 1 111 1 1211222333333322211 1111 1111 113588
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc
Q 003127 821 QWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 821 ~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
+|+.++++.++.++++.++|++
T Consensus 1117 fwl~ill~~~~~l~p~~~~~~~ 1138 (1178)
T PLN03190 1117 FWLCLLAIVVAALLPRFVVKVL 1138 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998888865
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-92 Score=821.02 Aligned_cols=803 Identities=23% Similarity=0.310 Sum_probs=603.2
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCe-EEEEecCC
Q 003127 4 MILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF-RRKISIYD 82 (845)
Q Consensus 4 ~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~-~~~i~~~~ 82 (845)
+.+++.+++++++ +. ...+.+.++|+++++.+++++|..+|+++++.|++.|+.++.|.|++. +++..|++
T Consensus 62 ~yFl~~~il~~ip-~~-------~~~~~~~~~pl~~vl~~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~ 133 (1151)
T KOG0206|consen 62 LYFLFIAILQFIP-LS-------PFNPYTTLVPLLFVLGITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKD 133 (1151)
T ss_pred HHHHHHHHHHcCc-cc-------ccCccceeeceeeeehHHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccce
Confidence 4678888999887 43 233445678999999999999999999999999999999999999644 89999999
Q ss_pred cCCCcEEEEcCCCeeeccEEEEeeCc----eeEecccCCCCCCccccc--------------------------------
Q 003127 83 LLPGDIVHLCMGDQVPADGLFVSGFS----VLINESSLTGESEPVNVN-------------------------------- 126 (845)
Q Consensus 83 l~~GDii~l~~G~~iPaD~~ll~~~~----~~Vdes~LtGEs~p~~k~-------------------------------- 126 (845)
+++||+|.+..+|.+|||.+++++++ |+|++++|+||++.+.|.
T Consensus 134 ~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~ 213 (1151)
T KOG0206|consen 134 VRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYT 213 (1151)
T ss_pred eeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccceeeehhhhhcccccccccccCCceEEcCCcccHhh
Confidence 99999999999999999999999875 999999999999998771
Q ss_pred --------------CCCCeEEeccEEEec-eEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHH
Q 003127 127 --------------ALNPFLLSGTKVQNG-SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFF 191 (845)
Q Consensus 127 --------------~~~~~v~~Gt~v~~g-~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 191 (845)
..++++++|+++.+. .+.|.|+.||++| |++++...++.|++++++.+|.....+..+.+..
T Consensus 214 f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dt---K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~ 290 (1151)
T KOG0206|consen 214 FVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDT---KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILM 290 (1151)
T ss_pred hhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcc---hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHH
Confidence 013467899999985 5899999999999 6777777788899999999998876665555444
Q ss_pred HHHHHHHHHHHHHHhhccCCC--ccccCCC-ChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHH------HHh---
Q 003127 192 AVVTFAVMVQGLFTRKLQEGT--HWTWSGD-DALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMK------KMM--- 259 (845)
Q Consensus 192 ~i~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~------~l~--- 259 (845)
+++..+. ............ .++...+ ........|..++.++...+|.+|...+.+.....+. .|.
T Consensus 291 ~~~~~i~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e 368 (1151)
T KOG0206|consen 291 CLISAIG--FAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEE 368 (1151)
T ss_pred HHHHHhh--hheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhcc
Confidence 4443332 122222111111 1111222 1123445566677788889999998877766655442 333
Q ss_pred -cCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCC-------C----------------CC
Q 003127 260 -NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKG-------T----------------PA 315 (845)
Q Consensus 260 -~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~-------~----------------~~ 315 (845)
+..+.+|+.+..|+||++++|++|||||||+|.|++.+|.+.+..|+....+. . +.
T Consensus 369 ~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 448 (1151)
T KOG0206|consen 369 TDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSR 448 (1151)
T ss_pred CCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhcccCccccccccccccccceeccch
Confidence 46788999999999999999999999999999999999999988775332110 0 00
Q ss_pred CC-----CCCChhHHHHHHHHHHhcCCceEEecCC--CceEEcCCchHHHHHHHHHHcCCChHHh------------hhh
Q 003127 316 FG-----SSIPASASKLLLQSIFNNTGGEVVIGEG--NKTEILGTPTETAILEFGLLLGGDFQAE------------RQA 376 (845)
Q Consensus 316 ~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~p~e~al~~~~~~~~~~~~~~------------~~~ 376 (845)
.. .....+....+..++++||+...+.+++ ...+...+|+|.|+++.|+..|+.+..+ .+.
T Consensus 449 ~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~ 528 (1151)
T KOG0206|consen 449 LVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEET 528 (1151)
T ss_pred hhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEecccccee
Confidence 00 0012233445677888999988777333 2456699999999999999999775432 358
Q ss_pred cceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhh
Q 003127 377 SKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCL 456 (845)
Q Consensus 377 ~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~ 456 (845)
|+++.+.+|+|.|||||||++.+++++.+|||||+.+|++++.. -.+..+++..+++++|+.+|+||||+
T Consensus 529 y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~ 598 (1151)
T KOG0206|consen 529 YELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK----------NGEKLREKTQEHLEEYATEGLRTLCL 598 (1151)
T ss_pred EEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhh
Confidence 99999999999999999999999999999999999999999874 12345667778999999999999999
Q ss_pred eeeecCCCC----------------------CCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCH
Q 003127 457 ACMEIGNEF----------------------SADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 514 (845)
Q Consensus 457 a~~~i~~~~----------------------~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~ 514 (845)
|||++++++ ++..+.+|+|++++|.+++||+++++++|+|++|++||||+|++|||+.
T Consensus 599 A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ 678 (1151)
T KOG0206|consen 599 AYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQ 678 (1151)
T ss_pred hhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHH
Confidence 999999861 1113578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCccCCc-----------------------------------------------eeeeCcccccCCHH--
Q 003127 515 NTAKAIARECGILTDNG-----------------------------------------------IAIEGPEFREKSDE-- 545 (845)
Q Consensus 515 ~ta~~ia~~lgi~~~~~-----------------------------------------------~~i~g~~~~~~~~~-- 545 (845)
+||.+++.+|++..++. ++++|+.+....+.
T Consensus 679 ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~ 758 (1151)
T KOG0206|consen 679 ETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDEL 758 (1151)
T ss_pred HHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchh
Confidence 99999999999987643 23333333222111
Q ss_pred --HHhhhc--CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHH--HHhccCEEec
Q 003127 546 --ELSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV--AKESADVIIL 619 (845)
Q Consensus 546 --~~~~~~--~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~--ak~~ad~v~~ 619 (845)
.+.++. ++..++||++|.||+.+++..++..+..++++|||+||++|++.||+|| |++|.|. |..++|+.+.
T Consensus 759 ~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGV--GIsG~EGmQAvmsSD~AIa 836 (1151)
T KOG0206|consen 759 RKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGV--GISGQEGMQAVMSSDFAIA 836 (1151)
T ss_pred hHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCe--eeccchhhhhhhcccchHH
Confidence 111221 5667999999999999999998777899999999999999999999999 4457775 7889999998
Q ss_pred cCChhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---CChhhHHHHHHHHHHHHHhhhhhcc--C
Q 003127 620 DDNFSTIVTV-AKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGN---APLTAVQLLWVNMIMDTLGALALAT--E 693 (845)
Q Consensus 620 ~~~~~~i~~~-i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~---~~l~~~~~l~~~~~~~~~p~~~l~~--~ 693 (845)
. |.-+.++ +.|||+.|.|+.+++.|.+|+|+.+.+.+|+|.+++++ ..+.++++.++|++++++|++.+|. .
T Consensus 837 q--FrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdq 914 (1151)
T KOG0206|consen 837 Q--FRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQ 914 (1151)
T ss_pred H--HHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeeccc
Confidence 8 7778776 58999999999999999999999999999999988765 4678999999999999999999985 5
Q ss_pred CCCcccccCCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcc--ccccCCCCCc-cchhhhHHHHHHHHHHH
Q 003127 694 PPNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGK--AVFRLDGPDP-DLILNTLIFNTFVFCQV 766 (845)
Q Consensus 694 ~~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~t~~f~~~v~~q~ 766 (845)
+.+.+.+.+.|. .++...++++.++.|++.++++++++|++.+... .....+|... .....+.+|++.|+.
T Consensus 915 Dvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~~~~~~~~~~~~G~~~d~~~~G~~~~T~~Viv-- 992 (1151)
T KOG0206|consen 915 DVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPYLVFEEQAVTSNGLTADYWTLGTTVFTIIVIV-- 992 (1151)
T ss_pred CCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeHhhheeeeeccCCCcCChhhccceEEEEEEEE--
Confidence 566666667774 3455688888888899999999999987644221 1222234322 112233333333222
Q ss_pred hcccccccccccccccCCchhHHHHHHHHHHHHHHHHHHHHhhh-ccc------------ccCCChHHHHHHHHHHHHHH
Q 003127 767 FNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGT-FAN------------TTPLNLQQWFVSILLGFLGM 833 (845)
Q Consensus 767 ~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~-~f~------------~~~l~~~~w~~~~~~~~~~~ 833 (845)
.+.+-.-..+.|. +-|+ +.+++++++.+++..+.+. +.. ..--++.+|+.+++.++.++
T Consensus 993 ---v~~~iaL~~~ywT--~i~~---i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~L 1064 (1151)
T KOG0206|consen 993 ---VNLKIALETSYWT--WINH---IVIWGSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAAL 1064 (1151)
T ss_pred ---EEeeeeeeehhee--HHHH---HHHHHHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 2222111222332 1122 2333333332222222211 111 11135789999999999999
Q ss_pred HHHHHHhhcc
Q 003127 834 PIAAVLKLIQ 843 (845)
Q Consensus 834 ~~~~i~K~~~ 843 (845)
+++.++|.+.
T Consensus 1065 lp~~~~~~l~ 1074 (1151)
T KOG0206|consen 1065 LPDFVYKSLQ 1074 (1151)
T ss_pred hHHHHHHHHH
Confidence 9999988553
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-86 Score=759.43 Aligned_cols=541 Identities=24% Similarity=0.359 Sum_probs=436.6
Q ss_pred hHHHHHHHHHHHHHHhhccc--CC-CCCchhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHhhhhcCCeeE-EEECC
Q 003127 2 TLMILAVCALVSLVVGIATE--GW-PKGAHDGLGIVMSILLVVFVTATSDY----KQSLQFKDLDREKKKITVQ-VARNG 73 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~--~~-~~~~~~~~~i~~~l~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~~-V~r~g 73 (845)
++++|++++++|++++.+.+ +. ...+.++..+.+.+++.++++.+.|. +.+++.+++.+...+.+++ |.|||
T Consensus 34 ~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a~~v~rdg 113 (673)
T PRK14010 34 IMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDG 113 (673)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeCC
Confidence 68899999999999997643 11 11235677777777777777777744 4444455555443333565 78999
Q ss_pred eEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC---CCeEEeccEEEeceEEEEEEEE
Q 003127 74 FRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---NPFLLSGTKVQNGSCKMLVTTV 150 (845)
Q Consensus 74 ~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~---~~~v~~Gt~v~~g~~~~~V~~t 150 (845)
++++|++++|+|||+|.+++||+|||||++++|+ ..||||+|||||.|+.|+.+ ++ +|+||.+.+|+++++|+++
T Consensus 114 ~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~d~~~-V~aGT~v~~G~~~i~Vta~ 191 (673)
T PRK14010 114 SYEMIDASDLKKGHIVRVATGEQIPNDGKVIKGL-ATVDESAITGESAPVIKESGGDFDN-VIGGTSVASDWLEVEITSE 191 (673)
T ss_pred EEEEEEHHHcCCCCEEEECCCCcccCCeEEEEcc-eEEecchhcCCCCceeccCCCccCe-eecCceeecceEEEEEEEe
Confidence 9999999999999999999999999999999996 59999999999999999876 55 9999999999999999999
Q ss_pred eecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHH
Q 003127 151 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 230 (845)
Q Consensus 151 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (845)
|.+|++||+.+++++++.+++|+|.....+...+.. .++.+++++..+. . + . .+...+..
T Consensus 192 g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i-----i~l~~~~~~~~~~-~-~--------~-----~~~~~~~~ 251 (673)
T PRK14010 192 PGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI-----IFLVVILTMYPLA-K-F--------L-----NFNLSIAM 251 (673)
T ss_pred cccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH-----HHHHHHHHHHHHH-h-h--------c-----cHHHHHHH
Confidence 999999999999999888899999776554332221 1111111111000 0 0 0 12234566
Q ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCC
Q 003127 231 AVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS 310 (845)
Q Consensus 231 ~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~ 310 (845)
.++++++++||+|+..+++..+.++++|+|+|+++|+.+++|+||++|++|||||||||+|++.+.++...+.
T Consensus 252 ~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~------- 324 (673)
T PRK14010 252 LIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS------- 324 (673)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC-------
Confidence 7778888899999999999999999999999999999999999999999999999999998887766542111
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCc
Q 003127 311 KGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKK 390 (845)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k 390 (845)
....+. ......|+.. +.||.++|+++++++.+.+.... ..+..||++++|
T Consensus 325 -----------~~~~~l-l~~a~~~~~~------------s~~P~~~AIv~~a~~~~~~~~~~-----~~~~~pF~~~~k 375 (673)
T PRK14010 325 -----------SSFERL-VKAAYESSIA------------DDTPEGRSIVKLAYKQHIDLPQE-----VGEYIPFTAETR 375 (673)
T ss_pred -----------ccHHHH-HHHHHHhcCC------------CCChHHHHHHHHHHHcCCCchhh-----hcceeccccccc
Confidence 011222 2333334321 35999999999998876553211 123589999999
Q ss_pred eEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCC
Q 003127 391 QMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 470 (845)
Q Consensus 391 ~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~ 470 (845)
+|++.++ ++ .+.||+++.+++.|++ ++...+ ..+.+..++++++|+|+++++
T Consensus 376 ~~gv~~~---g~--~i~kGa~~~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~v~------------- 427 (673)
T PRK14010 376 MSGVKFT---TR--EVYKGAPNSMVKRVKE----AGGHIP------VDLDALVKGVSKKGGTPLVVL------------- 427 (673)
T ss_pred eeEEEEC---CE--EEEECCHHHHHHHhhh----cCCCCc------hHHHHHHHHHHhCCCeEEEEE-------------
Confidence 9998753 22 4559999999999974 222222 125566778999999998765
Q ss_pred CCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 003127 471 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 550 (845)
Q Consensus 471 ~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~ 550 (845)
.|++++|+++++|++||+++++|++||++|++++|+|||++.||.++|+++|++.
T Consensus 428 ---~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~---------------------- 482 (673)
T PRK14010 428 ---EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR---------------------- 482 (673)
T ss_pred ---ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----------------------
Confidence 2678999999999999999999999999999999999999999999999999974
Q ss_pred cCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 551 IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 551 ~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
+++|++|+||.++|+.+|++ |+.|+|+|||.||+|+|++||+||||| +|+|.||++||+++.+||+..+.+++
T Consensus 483 -----v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~ls~Iv~av 555 (673)
T PRK14010 483 -----FVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSAKEAANLIDLDSNPTKLMEVV 555 (673)
T ss_pred -----EEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHHHHhCCEEEcCCCHHHHHHHH
Confidence 89999999999999999998 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 631 KWGRSVYINIQKFVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 631 ~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 660 (845)
++||++|.|+++++.|.++.|+...+..+.
T Consensus 556 ~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 556 LIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 999999999999999999999877665554
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-85 Score=747.20 Aligned_cols=548 Identities=25% Similarity=0.361 Sum_probs=436.9
Q ss_pred hHHHHHHHHHHHHHHhhccc---C---CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCe-
Q 003127 2 TLMILAVCALVSLVVGIATE---G---WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF- 74 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~---~---~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~- 74 (845)
++++|++++++|+++++++. + +...|...+.+++.+++..++++..+++.+++.+++.+...+.+++|+|||+
T Consensus 35 ~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~vir~g~~ 114 (679)
T PRK01122 35 VMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARKLREPGA 114 (679)
T ss_pred HHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCE
Confidence 68899999999999986532 1 1122333333333333334444556666666677776644445799999988
Q ss_pred EEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCC--eEEeccEEEeceEEEEEEEEee
Q 003127 75 RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCKMLVTTVGM 152 (845)
Q Consensus 75 ~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~--~v~~Gt~v~~g~~~~~V~~tG~ 152 (845)
++++++++|++||+|.+++||+|||||++++|+ ..||||+|||||.|+.|+.+++ .+|+||.+.+|+++++|+++|.
T Consensus 115 ~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vieG~-a~VDESaLTGES~PV~K~~G~~~~~V~aGT~v~~G~~~i~Vta~g~ 193 (679)
T PRK01122 115 AEEVPATELRKGDIVLVEAGEIIPADGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWIVIRITANPG 193 (679)
T ss_pred EEEEEHHHcCCCCEEEEcCCCEEEEEEEEEEcc-EEEEcccccCCCCceEeCCCCccCeEEeceEEEeeeEEEEEEEecc
Confidence 899999999999999999999999999999996 6999999999999999986542 4999999999999999999999
Q ss_pred cchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHH
Q 003127 153 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAV 232 (845)
Q Consensus 153 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (845)
+|.+||+.+++++.+.+++|+|...+.+...+..+.+++++..+.+ .++. +. .+ .+..++
T Consensus 194 ~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~---~~~~-----g~----------~~--~l~~~i 253 (679)
T PRK01122 194 ESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPF---AAYS-----GG----------AL--SITVLV 253 (679)
T ss_pred cCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHH---HHHh-----Cc----------hH--HHHHHH
Confidence 9999999999999888899999888776655543322222111111 1110 10 11 466788
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCC
Q 003127 233 TIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKG 312 (845)
Q Consensus 233 ~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~ 312 (845)
++++++|||+++.+.+.....++.+|.|+|+++|+.+++|+||++|++|||||||||+|+|++.+++..+..
T Consensus 254 allV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~-------- 325 (679)
T PRK01122 254 ALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV-------- 325 (679)
T ss_pred HHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999987642211
Q ss_pred CCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHH-cCCChHHhhhhcceEEEecCCCCCce
Q 003127 313 TPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLL-LGGDFQAERQASKIVKVEPFNSVKKQ 391 (845)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~-~~~~~~~~~~~~~~l~~~~F~s~~k~ 391 (845)
. .+.+......|+.. ..||..+|+++++++ .+... .+..++..+..||++.+++
T Consensus 326 --------~---~~~ll~~a~~~s~~------------s~hP~~~AIv~~a~~~~~~~~--~~~~~~~~~~~pF~s~~~~ 380 (679)
T PRK01122 326 --------T---EEELADAAQLSSLA------------DETPEGRSIVVLAKQRFNLRE--RDLQSLHATFVPFSAQTRM 380 (679)
T ss_pred --------C---HHHHHHHHHHhcCC------------CCCchHHHHHHHHHhhcCCCc--hhhccccceeEeecCcCce
Confidence 0 12233333334321 357999999999876 34321 1222456778999999998
Q ss_pred EEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCC
Q 003127 392 MGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPI 471 (845)
Q Consensus 392 ~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~ 471 (845)
|++.++ + ..+.||+++.+++.|.+ +|...| +++.+..++++++|.|++++|+
T Consensus 381 ~gv~~~---g--~~~~kGa~e~il~~~~~----~g~~~~------~~~~~~~~~~a~~G~~~l~va~------------- 432 (679)
T PRK01122 381 SGVDLD---G--REIRKGAVDAIRRYVES----NGGHFP------AELDAAVDEVARKGGTPLVVAE------------- 432 (679)
T ss_pred EEEEEC---C--EEEEECCHHHHHHHHHh----cCCcCh------HHHHHHHHHHHhCCCcEEEEEE-------------
Confidence 888643 2 47899999999999963 222221 4567788899999999999983
Q ss_pred CCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 472 PTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 472 ~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
|++++|+++++|++||++++++++||++||+++|+|||++.||.++|+++|++.
T Consensus 433 ---~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----------------------- 486 (679)
T PRK01122 433 ---DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----------------------- 486 (679)
T ss_pred ---CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE-----------------------
Confidence 568999999999999999999999999999999999999999999999999964
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
+++|++|+||.++|+.+|++ |+.|+|+|||.||+|+|++|||||||| +|+|.||++||+++.+||+..+.++++
T Consensus 487 ----v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvAkeAADiVLldd~~s~Iv~av~ 560 (679)
T PRK01122 487 ----FLAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAGNMVDLDSNPTKLIEVVE 560 (679)
T ss_pred ----EEccCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHH
Confidence 89999999999999999998 999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHh
Q 003127 632 WGRSVYINIQKFVQFQLTVNV---VALIVNFSSAC 663 (845)
Q Consensus 632 ~gR~~~~~i~~~i~~~l~~n~---~~~~~~~~~~~ 663 (845)
+||+..-.--..-.|++..-+ ..+++.++...
T Consensus 561 ~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~ 595 (679)
T PRK01122 561 IGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAAT 595 (679)
T ss_pred HHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 999998555555677765333 24444444433
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-85 Score=725.54 Aligned_cols=727 Identities=23% Similarity=0.339 Sum_probs=534.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcC-CCeeeccEEEEeeCceeEecccCCCCCC
Q 003127 43 VTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCM-GDQVPADGLFVSGFSVLINESSLTGESE 121 (845)
Q Consensus 43 ~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~-G~~iPaD~~ll~~~~~~Vdes~LtGEs~ 121 (845)
++......++++.+++-+ ....|+|+|||.+++|.++|||||||+.+.+ |-..|||++|++|+ |.||||+|||||.
T Consensus 230 ~sv~e~r~qs~rlr~mv~--~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~g~-civNEsmLTGESV 306 (1140)
T KOG0208|consen 230 LSVYETRKQSIRLRSMVK--FTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLISGD-CIVNESMLTGESV 306 (1140)
T ss_pred HHHHHHHHHHHHHHHHhc--CCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEEeCc-EEeecccccCCcc
Confidence 333444344444444433 2357999999999999999999999999999 89999999999996 9999999999999
Q ss_pred cccccC------------------CCCeEEeccEEEe------ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHH
Q 003127 122 PVNVNA------------------LNPFLLSGTKVQN------GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKL 177 (845)
Q Consensus 122 p~~k~~------------------~~~~v~~Gt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~ 177 (845)
|+.|.+ ..+++|+||++.+ +.+.+.|++||.+|..|++.+++..+++....+-+..
T Consensus 307 Pv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfyrds 386 (1140)
T KOG0208|consen 307 PVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFYRDS 386 (1140)
T ss_pred cccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHHHHH
Confidence 999942 2357999999985 5689999999999999999999999876555444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHH
Q 003127 178 NGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKK 257 (845)
Q Consensus 178 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~ 257 (845)
-++.. +..+++++.++.....+... +. ++...+..++.++.+.+|++||.+++++..++..|
T Consensus 387 ~~fi~----~l~~ia~~gfiy~~i~l~~~----g~----------~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~R 448 (1140)
T KOG0208|consen 387 FKFIL----FLVIIALIGFIYTAIVLNLL----GV----------PLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSR 448 (1140)
T ss_pred HHHHH----HHHHHHHHHHHHHhHhHHHc----CC----------CHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHH
Confidence 33322 22333333333322222211 11 45567888999999999999999999999999999
Q ss_pred HhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEec---C--CCCC-C---CCCCCCChhHHHHH
Q 003127 258 MMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVD---N--SKGT-P---AFGSSIPASASKLL 328 (845)
Q Consensus 258 l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~---~--~~~~-~---~~~~~~~~~~~~~l 328 (845)
|.|+||+|-+++.+...|++|++|||||||||++.+.+..+.......... + .... . ....+........+
T Consensus 449 Lkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 528 (1140)
T KOG0208|consen 449 LKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNL 528 (1140)
T ss_pred HHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhccceeeccccccCCchHHH
Confidence 999999999999999999999999999999999999999887643221000 0 0000 0 00001111113356
Q ss_pred HHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcC-------CC-------------h-----HH----hhhhcce
Q 003127 329 LQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLG-------GD-------------F-----QA----ERQASKI 379 (845)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~-------~~-------------~-----~~----~~~~~~~ 379 (845)
..+++.||+.....+ ...|||.|.-+.+.....- .. . .. ..+.+.+
T Consensus 529 ~~a~atCHSL~~v~g-----~l~GDPLdlkmfe~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si 603 (1140)
T KOG0208|consen 529 VAAMATCHSLTLVDG-----TLVGDPLDLKMFESTGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISI 603 (1140)
T ss_pred HHHHhhhceeEEeCC-----eeccCceeeeeeeccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEE
Confidence 678888986554332 3467777776665432110 00 0 00 0014778
Q ss_pred EEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhhee
Q 003127 380 VKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLAC 458 (845)
Q Consensus 380 l~~~~F~s~~k~~sviv~~~-~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~ 458 (845)
++.+||+|..+|||||++.+ +++..+|+|||||.|.+.|++ +.+| +.+++.+++|+.+|+|++|+|+
T Consensus 604 ~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p------~tvP------~dy~evl~~Yt~~GfRVIAlA~ 671 (1140)
T KOG0208|consen 604 VKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKP------ETVP------ADYQEVLKEYTHQGFRVIALAS 671 (1140)
T ss_pred EEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCc------ccCC------ccHHHHHHHHHhCCeEEEEEec
Confidence 99999999999999999975 467899999999999999974 2233 4588899999999999999999
Q ss_pred eecCCC-----CCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--
Q 003127 459 MEIGNE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG-- 531 (845)
Q Consensus 459 ~~i~~~-----~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~-- 531 (845)
|+++.. +...++.+|.|++|+|++.+|++++++++++|++|++++||.+|+||||..||..+||+||+..+..
T Consensus 672 K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v 751 (1140)
T KOG0208|consen 672 KELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKV 751 (1140)
T ss_pred CccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeE
Confidence 999876 2345688999999999999999999999999999999999999999999999999999999987643
Q ss_pred -----------------------------------------------------eeeeCccccc---CCHHHHhhhcCCee
Q 003127 532 -----------------------------------------------------IAIEGPEFRE---KSDEELSKLIPKIQ 555 (845)
Q Consensus 532 -----------------------------------------------------~~i~g~~~~~---~~~~~~~~~~~~~~ 555 (845)
.+++|+.++- ...+.+.+++.+..
T Consensus 752 ~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~ 831 (1140)
T KOG0208|consen 752 IIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGT 831 (1140)
T ss_pred EEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCe
Confidence 2233333322 12344556667888
Q ss_pred EEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHH
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRS 635 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~ 635 (845)
||||++|.||.++++.+|+. |+.|+|+|||+||+.|||+||+||+++ ..+|.-||.++..-.+.+++.+.|+|||+
T Consensus 832 VfARMsP~qK~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLS---eaEASvAApFTSk~~~I~cVp~vIrEGRa 907 (1140)
T KOG0208|consen 832 VFARMSPDQKAELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLS---EAEASVAAPFTSKTPSISCVPDVIREGRA 907 (1140)
T ss_pred EEeecCchhHHHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchh---hhhHhhcCccccCCCchhhHhHHHhhhhh
Confidence 99999999999999999988 999999999999999999999999887 34678889999988899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHH
Q 003127 636 VYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNV 715 (845)
Q Consensus 636 ~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~ 715 (845)
.+-.--.+++|+..|.++..+..+ .++.....++..|.++++++...+.++.++..+|..++-..+| ..+++++.
T Consensus 908 ALVTSf~~FkYMalYs~iqFisv~--~LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~ 982 (1140)
T KOG0208|consen 908 ALVTSFACFKYMALYSAIQFISVV--FLYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKK 982 (1140)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhh--eeeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---Cccccccc
Confidence 999999999999988776554433 3445567899999999999999888999999888888877777 56689988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc--ccccCCCC----CccchhhhHHHHHHHHHHHhcccccccccccccc-cCCchhH
Q 003127 716 MWRNILGQSLYQFLIIWYLQTRGK--AVFRLDGP----DPDLILNTLIFNTFVFCQVFNEISSREMEKINVF-KGILKNY 788 (845)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~-~~~~~n~ 788 (845)
.+...++|.++...+.+..++... .|+..+.+ +..+...|..|..-.|.=+++++... ..+.| ++.++|+
T Consensus 983 ~~~~l~~q~vli~l~q~i~~l~~~~qpw~~pp~~~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S---~g~pfr~pl~~n~ 1059 (1140)
T KOG0208|consen 983 ILVPLLLQIVLICLVQWILTLIVEPQPWYEPPNPQVDDNTQSSDNTSLFFVSSFQYIFIALVLS---KGSPFRRPLWKNV 1059 (1140)
T ss_pred hhhhhHHHHHHHHHHHHhhheeeccccceecCCCCcCcccccceeeEeeehhHHHHHHhheeec---cCCcccCchhcCc
Confidence 888888888777777666655432 22221111 11122344445433333344443322 22344 3666777
Q ss_pred HHHHHHHHHHHHH--HHHHHH---hhhcccccCCCh
Q 003127 789 VFVAVLTCTVLFQ--IIIIEL---LGTFANTTPLNL 819 (845)
Q Consensus 789 ~~~~~~~~~~~~~--~~~v~~---~~~~f~~~~l~~ 819 (845)
.+...+....... +..+.. ...+++.++.+-
T Consensus 1060 ~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~ 1095 (1140)
T KOG0208|consen 1060 LFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPT 1095 (1140)
T ss_pred eeeeehhhHHhhhhhhhhccccchhhhhhceeccCc
Confidence 6554433332221 111111 124567777664
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-86 Score=701.63 Aligned_cols=755 Identities=21% Similarity=0.277 Sum_probs=588.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEE-ECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEe
Q 003127 27 AHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVA-RNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVS 105 (845)
Q Consensus 27 ~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~-r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~ 105 (845)
.....+++.|+.++++++..++..++.++++-++..|+.+.+++ |||...+ +++++++||+|+++.+++||||.++|.
T Consensus 125 ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLr 203 (1051)
T KOG0210|consen 125 IGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLR 203 (1051)
T ss_pred ecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEE
Confidence 34456678899999999999999999999998888888777776 6666555 999999999999999999999999999
Q ss_pred eCc----eeEecccCCCCCCccccc----------------------------------------------CCCCeEEec
Q 003127 106 GFS----VLINESSLTGESEPVNVN----------------------------------------------ALNPFLLSG 135 (845)
Q Consensus 106 ~~~----~~Vdes~LtGEs~p~~k~----------------------------------------------~~~~~v~~G 135 (845)
+++ |.|.+..||||++.+-|- .-+|.++++
T Consensus 204 Tsd~sg~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWan 283 (1051)
T KOG0210|consen 204 TSDKSGSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWAN 283 (1051)
T ss_pred ccCCCCceEEeccccCCcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeee
Confidence 763 999999999999987660 114679999
Q ss_pred cEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccc
Q 003127 136 TKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWT 215 (845)
Q Consensus 136 t~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 215 (845)
|.+.+|.+.|+|+|||.+|+ -..+...++.|-..++.++|.+.+++..+.+.+++++...- |...
T Consensus 284 TVvAs~t~~gvVvYTG~dtR---svMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~-----------g~~~- 348 (1051)
T KOG0210|consen 284 TVVASGTAIGVVVYTGRDTR---SVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMK-----------GFGS- 348 (1051)
T ss_pred eeEecCcEEEEEEEecccHH---HHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhh-----------cCCC-
Confidence 99999999999999999994 55566677778888999999999999888777776655431 1111
Q ss_pred cCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhc----CCceeecchhhhhccCcEEEEeccCCccCCC
Q 003127 216 WSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMN----DKALVRHLAACETMGSATSICSDKTGTLTTN 291 (845)
Q Consensus 216 ~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~----~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~ 291 (845)
.|...+...+.++...+|.+|-..+.++...-..++.+ .|.++|+.+..|+||+++++.+|||||||+|
T Consensus 349 -------~wyi~~~RfllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqN 421 (1051)
T KOG0210|consen 349 -------DWYIYIIRFLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQN 421 (1051)
T ss_pred -------chHHHHHHHHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccc
Confidence 23455666677777889999988888887776666654 3678999999999999999999999999999
Q ss_pred CeEEEEEEEcCeeEEecCC----------CC----CCC-----CCCCCChhHHHHHHHHHHhcCCceEEecCCC-ceEEc
Q 003127 292 HMTVLKACICEEIKEVDNS----------KG----TPA-----FGSSIPASASKLLLQSIFNNTGGEVVIGEGN-KTEIL 351 (845)
Q Consensus 292 ~m~v~~~~~~~~~~~~~~~----------~~----~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~ 351 (845)
+|.+++++.+.-.|..+.. .. .+. ........ ......++.+||+..+..++++ ..+..
T Consensus 422 EM~~KKiHLGTv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~r-v~~~V~alalCHNVTPv~e~~ge~sYQA 500 (1051)
T KOG0210|consen 422 EMEFKKIHLGTVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSAR-VRNAVLALALCHNVTPVFEDDGEVSYQA 500 (1051)
T ss_pred hheeeeeeeeeeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHH-HHHHHHHHHHhccCCcccCCCceEEeec
Confidence 9999999987665542210 00 000 00111122 2334567888999988887764 45669
Q ss_pred CCchHHHHHHHHHHcCCChHHhh-------------hhcceEEEecCCCCCceEEEEEEcC-CCeEEEEEeCcHHHHHHh
Q 003127 352 GTPTETAILEFGLLLGGDFQAER-------------QASKIVKVEPFNSVKKQMGVVIELP-EGGFRVHCKGASEIILAA 417 (845)
Q Consensus 352 ~~p~e~al~~~~~~~~~~~~~~~-------------~~~~~l~~~~F~s~~k~~sviv~~~-~~~~~~~~kGa~~~il~~ 417 (845)
.+|+|.|++++.+..|....+++ .+|++++.|||+|++|||++||+++ .+++..|.|||+.+|-..
T Consensus 501 aSPDEVAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~i 580 (1051)
T KOG0210|consen 501 ASPDEVAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGI 580 (1051)
T ss_pred CCCCeEEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcc
Confidence 99999999999998887644332 3799999999999999999999976 578999999998776543
Q ss_pred chhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCC---------------CCC--------CCCCCC
Q 003127 418 CDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEF---------------SAD--------APIPTE 474 (845)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~---------------~~~--------~~~~e~ 474 (845)
-+. .+++++....++++|+|++.+|+|.+++++ .+. ...+|+
T Consensus 581 Vq~---------------NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~ 645 (1051)
T KOG0210|consen 581 VQY---------------NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLER 645 (1051)
T ss_pred ccc---------------chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHh
Confidence 321 256788899999999999999999998761 000 135789
Q ss_pred ceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc-----------------------
Q 003127 475 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----------------------- 531 (845)
Q Consensus 475 ~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~----------------------- 531 (845)
|++++|++|+||+++++++.+++.||+||||+||+|||+.+||..+|+..++...+.
T Consensus 646 dlelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~ 725 (1051)
T KOG0210|consen 646 DLELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRR 725 (1051)
T ss_pred hhHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999976432
Q ss_pred -----eeeeCcccccC---CHHHHhhhc--CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 532 -----IAIEGPEFREK---SDEELSKLI--PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 532 -----~~i~g~~~~~~---~~~~~~~~~--~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
++++|+.+... .++++.++. ....++||++|.||+++++.+|++.|+.|+++|||.||++|+++||+||.
T Consensus 726 k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiG 805 (1051)
T KOG0210|consen 726 KTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIG 805 (1051)
T ss_pred CCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeeccccee
Confidence 67777766533 234455544 34569999999999999999999989999999999999999999999995
Q ss_pred eCCCCcHH--HHhccCEEeccCChhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHH---H
Q 003127 602 MGIAGTEV--AKESADVIILDDNFSTIVTVA-KWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQ---L 675 (845)
Q Consensus 602 mg~~~~~~--ak~~ad~v~~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~---~ 675 (845)
+.|.|. |.-|||+.+.. |..+.+++ -|||..|+|..+.-+|.+.+.+....++..|+....+.|..-+| +
T Consensus 806 --I~gkEGkQASLAADfSItq--F~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~Lm 881 (1051)
T KOG0210|consen 806 --IVGKEGKQASLAADFSITQ--FSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLM 881 (1051)
T ss_pred --eecccccccchhccccHHH--HHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHH
Confidence 445554 77889999987 99999975 78999999999999999999999999999888777776665554 4
Q ss_pred HHHHHHHHHHhhhhhccCC-CCcccccCCCC----CCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcc
Q 003127 676 LWVNMIMDTLGALALATEP-PNGDLMKRSPV----GRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPD 750 (845)
Q Consensus 676 l~~~~~~~~~p~~~l~~~~-~~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 750 (845)
.-|..+++++|.+++..+. ..++.....|. -.+++.++.+.|+.|++.++||+.++++..+.- |. ...
T Consensus 882 vgysT~YTmlPVFSlv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l---~~----~ef 954 (1051)
T KOG0210|consen 882 VGYSTCYTMLPVFSLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLL---FD----TEF 954 (1051)
T ss_pred HHHHHHHHHhhhheeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHH---hh----hhh
Confidence 4578899999999998743 34444444553 245677888889889999999999887743211 11 001
Q ss_pred chhhhHHHHHHHHHHHhc-ccccccccccccccCCchhHHHHHHHHHHHHHHHHHHHHhhhcccccC-CChHHHHHHHHH
Q 003127 751 LILNTLIFNTFVFCQVFN-EISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTP-LNLQQWFVSILL 828 (845)
Q Consensus 751 ~~~~t~~f~~~v~~q~~~-~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v~~~~~~f~~~~-l~~~~w~~~~~~ 828 (845)
....++.|.++++.++.- ++..+ . | +|.++.+-+.+..++++.++++.++|.... ++|.+.+.+.++
T Consensus 955 ~~ivaisFtaLi~tELiMVaLtv~---t---w-----~~~m~vae~lsL~~Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I 1023 (1051)
T KOG0210|consen 955 IHIVAISFTALILTELIMVALTVR---T---W-----HWLMVVAELLSLALYIVSLAFLHEYFDRYFILTYVFLWKVTVI 1023 (1051)
T ss_pred eEeeeeeeHHHHHHHHHHHhhhhh---h---h-----hHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 123455677777766432 22222 1 2 456677777788887888899999888765 456666666777
Q ss_pred HHHHHHHHHHHhhc
Q 003127 829 GFLGMPIAAVLKLI 842 (845)
Q Consensus 829 ~~~~~~~~~i~K~~ 842 (845)
-++.+++..+.|.+
T Consensus 1024 ~~vS~Lpl~~~K~l 1037 (1051)
T KOG0210|consen 1024 TLVSCLPLYFIKAL 1037 (1051)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777777777754
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-81 Score=713.01 Aligned_cols=539 Identities=26% Similarity=0.371 Sum_probs=437.5
Q ss_pred hHHHHHHHHHHHHHHhhccc-----CCCCCchhH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEE-C
Q 003127 2 TLMILAVCALVSLVVGIATE-----GWPKGAHDG---LGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVAR-N 72 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~-----~~~~~~~~~---~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r-~ 72 (845)
++++|+++|++|+++++.+. ++...|++. +.+++.+++..++++..+++.+++.+++.+...+..++|+| |
T Consensus 34 ~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a~vlr~d 113 (675)
T TIGR01497 34 VMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFAKLLRDD 113 (675)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEeeC
Confidence 68999999999999987421 111246764 33334444555566677777777887777655455688885 8
Q ss_pred CeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCC--eEEeccEEEeceEEEEEEEE
Q 003127 73 GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCKMLVTTV 150 (845)
Q Consensus 73 g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~--~v~~Gt~v~~g~~~~~V~~t 150 (845)
|++++|++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|+.++. .+|+||.+.+|+++++|+++
T Consensus 114 g~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vieG~-~~VDESaLTGES~PV~K~~g~~~~~V~aGT~v~~G~~~i~Vt~~ 192 (675)
T TIGR01497 114 GAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGV-ASVDESAITGESAPVIKESGGDFASVTGGTRILSDWLVVECTAN 192 (675)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcc-EEEEcccccCCCCceeecCCCCcceeecCcEEEeeEEEEEEEEe
Confidence 99999999999999999999999999999999995 7999999999999999987653 39999999999999999999
Q ss_pred eecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHH
Q 003127 151 GMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI 230 (845)
Q Consensus 151 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (845)
|.+|++||+.+++++++.+++|+|..++.+...+..+.++ +++.++.... + .+ . . ..+..
T Consensus 193 g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li---~~~~~~~~~~----~-~~-------~---~--~~~~~ 252 (675)
T TIGR01497 193 PGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLL---VTATLWPFAA----Y-GG-------N---A--ISVTV 252 (675)
T ss_pred cccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHH---HHHHHHHHHH----h-cC-------h---h--HHHHH
Confidence 9999999999999998888899998877765544322221 1112111110 0 00 0 1 13556
Q ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCC
Q 003127 231 AVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNS 310 (845)
Q Consensus 231 ~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~ 310 (845)
++++++++|||+++...+.....++.+|.++|+++|+.+++|++|++|++|||||||||+|+|++.+++..+..
T Consensus 253 lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~------ 326 (675)
T TIGR01497 253 LVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV------ 326 (675)
T ss_pred HHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC------
Confidence 78899999999988888777778999999999999999999999999999999999999999999987642211
Q ss_pred CCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCc
Q 003127 311 KGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKK 390 (845)
Q Consensus 311 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k 390 (845)
. .+.+......|+.. ..||.++|+++++++.+.+... ..++..+..||++.++
T Consensus 327 ------------~-~~~ll~~aa~~~~~------------s~hP~a~Aiv~~a~~~~~~~~~--~~~~~~~~~pf~~~~~ 379 (675)
T TIGR01497 327 ------------D-EKTLADAAQLASLA------------DDTPEGKSIVILAKQLGIREDD--VQSLHATFVEFTAQTR 379 (675)
T ss_pred ------------c-HHHHHHHHHHhcCC------------CCCcHHHHHHHHHHHcCCCccc--cccccceEEEEcCCCc
Confidence 0 12233333333321 4689999999999887654322 1234567899999988
Q ss_pred eEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCC
Q 003127 391 QMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAP 470 (845)
Q Consensus 391 ~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~ 470 (845)
++++.+. ++ ..+.||++|.+++.|.. +|...| +.+++..++++++|.|++++|+
T Consensus 380 ~sg~~~~--~g--~~~~kGa~e~i~~~~~~----~g~~~~------~~~~~~~~~~a~~G~r~l~va~------------ 433 (675)
T TIGR01497 380 MSGINLD--NG--RMIRKGAVDAIKRHVEA----NGGHIP------TDLDQAVDQVARQGGTPLVVCE------------ 433 (675)
T ss_pred EEEEEEe--CC--eEEEECCHHHHHHHHHh----cCCCCc------HHHHHHHHHHHhCCCeEEEEEE------------
Confidence 8876543 22 46899999999988752 222222 3467778899999999999995
Q ss_pred CCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 003127 471 IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 550 (845)
Q Consensus 471 ~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~ 550 (845)
|.+++|+++++|++||+++++|++||++|++++|+|||+..+|.++|+++|+++
T Consensus 434 ----~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~---------------------- 487 (675)
T TIGR01497 434 ----DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD---------------------- 487 (675)
T ss_pred ----CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----------------------
Confidence 357999999999999999999999999999999999999999999999999974
Q ss_pred cCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 551 IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 551 ~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
+++|++|++|.++++.+|++ |+.|+|+|||.||+|||++||+||||| +|++.+|++||+++.+||+..+.+++
T Consensus 488 -----v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~akeaadivLldd~~s~Iv~av 560 (675)
T TIGR01497 488 -----FIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSDPTKLIEVV 560 (675)
T ss_pred -----EEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHHHHhCCEEECCCCHHHHHHHH
Confidence 89999999999999999998 999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 003127 631 KWGRSVYINIQKFVQFQLTVNVV 653 (845)
Q Consensus 631 ~~gR~~~~~i~~~i~~~l~~n~~ 653 (845)
++||+++-+-.....|++..++.
T Consensus 561 ~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 561 HIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHHHHHHHHHHHHheeeecccHH
Confidence 99999999999999999877664
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-78 Score=641.06 Aligned_cols=613 Identities=23% Similarity=0.379 Sum_probs=483.6
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCC
Q 003127 3 LMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYD 82 (845)
Q Consensus 3 ~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~ 82 (845)
-|++-+||++++.+.-- .+.+..|.|...|...+++...++.++|+........+++... .+++|+|||+|.++.+++
T Consensus 74 swVMEaAAimA~~Lang-~~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA-~KakVlRDGkw~E~eAs~ 151 (942)
T KOG0205|consen 74 SWVMEAAAIMAIGLANG-GGRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLA-PKAKVLRDGKWSEQEASI 151 (942)
T ss_pred HHHHHHHHHHHHHHhcC-CCCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccC-cccEEeecCeeeeeeccc
Confidence 46778899988877532 2334489999988888888888888888888888888876544 478999999999999999
Q ss_pred cCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHh
Q 003127 83 LLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMAT 162 (845)
Q Consensus 83 l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 162 (845)
||||||+.++.|++||||++|++++-+.||+|.|||||.|+.|.+++. +|+||++.+|++.++|++||.+|..||-+.+
T Consensus 152 lVPGDIlsik~GdIiPaDaRLl~gD~LkiDQSAlTGESLpvtKh~gd~-vfSgSTcKqGE~eaVViATg~~TF~GkAA~L 230 (942)
T KOG0205|consen 152 LVPGDILSIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKHPGDE-VFSGSTCKQGEIEAVVIATGVHTFFGKAAHL 230 (942)
T ss_pred cccCceeeeccCCEecCccceecCCccccchhhhcCCccccccCCCCc-eecccccccceEEEEEEEeccceeehhhHHh
Confidence 999999999999999999999999989999999999999999988776 9999999999999999999999999999998
Q ss_pred hccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhh-cCC
Q 003127 163 LSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVA-VPE 241 (845)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~-~P~ 241 (845)
+.. ......+++-++.+.++..+.+.+ .+++- +...+..+. .........+.++++. +|.
T Consensus 231 Vds-t~~~GHFqkVLt~IGn~ci~si~~-g~lie--~~vmy~~q~---------------R~~r~~i~nLlvllIGgiPi 291 (942)
T KOG0205|consen 231 VDS-TNQVGHFQKVLTGIGNFCICSIAL-GMLIE--ITVMYPIQH---------------RLYRDGIDNLLVLLIGGIPI 291 (942)
T ss_pred hcC-CCCcccHHHHHHhhhhHHHHHHHH-HHHHH--HHhhhhhhh---------------hhhhhhhhheheeeeccccc
Confidence 887 445688999999888776554322 22111 111111110 1122233344445555 999
Q ss_pred chHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEE--E--EEcCeeEEecCCCCCCCCC
Q 003127 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLK--A--CICEEIKEVDNSKGTPAFG 317 (845)
Q Consensus 242 ~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~--~--~~~~~~~~~~~~~~~~~~~ 317 (845)
++|..+++.++.++.+++++|+++|+.+++|+++.+|++|+|||||||.|++++.+ + +..+
T Consensus 292 amPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~g--------------- 356 (942)
T KOG0205|consen 292 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKG--------------- 356 (942)
T ss_pred ccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecC---------------
Confidence 99999999999999999999999999999999999999999999999999999976 2 1111
Q ss_pred CCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEE
Q 003127 318 SSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIE 397 (845)
Q Consensus 318 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~ 397 (845)
..++ .-++..+.. + . ....|..|.|++...+. ..+.+..++.++.+||++..||....+.
T Consensus 357 --v~~D-~~~L~A~rA--s--r---------~en~DAID~A~v~~L~d----PKeara~ikevhF~PFnPV~Krta~ty~ 416 (942)
T KOG0205|consen 357 --VDKD-DVLLTAARA--S--R---------KENQDAIDAAIVGMLAD----PKEARAGIKEVHFLPFNPVDKRTALTYI 416 (942)
T ss_pred --CChH-HHHHHHHHH--h--h---------hcChhhHHHHHHHhhcC----HHHHhhCceEEeeccCCccccceEEEEE
Confidence 1111 112222211 1 1 11457899999987653 4566778999999999999999999999
Q ss_pred cCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceE
Q 003127 398 LPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYT 477 (845)
Q Consensus 398 ~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~ 477 (845)
+++|+....+||||+.|++.|.. +.+.++...+.+++|+++|+|-+++|++..++... +.-.....
T Consensus 417 d~dG~~~r~sKGAPeqil~l~~~-----------~~~i~~~vh~~id~~AeRGlRSLgVArq~v~e~~~---~~~g~pw~ 482 (942)
T KOG0205|consen 417 DPDGNWHRVSKGAPEQILKLCNE-----------DHDIPERVHSIIDKFAERGLRSLAVARQEVPEKTK---ESPGGPWE 482 (942)
T ss_pred CCCCCEEEecCCChHHHHHHhhc-----------cCcchHHHHHHHHHHHHhcchhhhhhhhccccccc---cCCCCCcc
Confidence 99999999999999999999974 23345778899999999999999999998877532 22345688
Q ss_pred EEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc------ccCCHHHHhhhc
Q 003127 478 CIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF------REKSDEELSKLI 551 (845)
Q Consensus 478 ~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~------~~~~~~~~~~~~ 551 (845)
|+|+.-+-||+|.++.++|++....|+.|.|+|||...-++..++++|.-.+ ...+.++ ..+......+.+
T Consensus 483 ~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtn---mypss~llG~~~~~~~~~~~v~eli 559 (942)
T KOG0205|consen 483 FVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTN---MYPSSALLGLGKDGSMPGSPVDELI 559 (942)
T ss_pred cccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccC---cCCchhhccCCCCCCCCCCcHHHHh
Confidence 9999999999999999999999999999999999999999999999997643 1111111 122223445556
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+..-|+.+.|++|.++|+.||++ ++.++|+|||+||.|+||+||+|||+. .++|.|+.++|+|+....++-+..++.
T Consensus 560 e~adgfAgVfpehKy~iV~~Lq~r-~hi~gmtgdgvndapaLKkAdigiava-~atdaar~asdiVltepglSviI~avl 637 (942)
T KOG0205|consen 560 EKADGFAGVFPEHKYEIVKILQER-KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVL 637 (942)
T ss_pred hhccCccccCHHHHHHHHHHHhhc-CceecccCCCcccchhhcccccceeec-cchhhhcccccEEEcCCCchhhHHHHH
Confidence 666788999999999999999999 999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCC
Q 003127 632 WGRSVYINIQKFVQFQLTVNVVALI-VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEP 694 (845)
Q Consensus 632 ~gR~~~~~i~~~i~~~l~~n~~~~~-~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~ 694 (845)
.+|.+|+|++.+..|.++..+-.++ +.++..++ ..-|++...+++.++-|. +..+++.+.
T Consensus 638 tSraIfqrmknytiyavsitiriv~gfml~alIw--~~df~pfmvliiailnd~-t~mtis~d~ 698 (942)
T KOG0205|consen 638 TSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIW--EFDFSPFMVLIIAILNDG-TIMTISKDR 698 (942)
T ss_pred HHHHHHHHHhhheeeeehhHHHHHHHHHHHHHHH--HhcCCHHHHHHHHHhcCC-ceEEEEccc
Confidence 9999999999998888776554331 11111222 344566666666555553 344444433
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-76 Score=674.48 Aligned_cols=474 Identities=31% Similarity=0.417 Sum_probs=400.2
Q ss_pred hcCCeeEEEE-CCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEe
Q 003127 62 KKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQN 140 (845)
Q Consensus 62 ~~~~~~~V~r-~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~ 140 (845)
..+.++++++ ||++++++.+|+++||+|.++|||+||+||++++|++ .||||+|||||.|+.|.+++. +++||.+.+
T Consensus 208 l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~~G~s-~vDeS~iTGEs~PV~k~~Gd~-V~aGtiN~~ 285 (713)
T COG2217 208 LAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVVSGSS-SVDESMLTGESLPVEKKPGDE-VFAGTVNLD 285 (713)
T ss_pred cCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEEeCcE-EeecchhhCCCCCEecCCCCE-EeeeEEECC
Confidence 4577887776 5668999999999999999999999999999999986 999999999999999988775 999999999
Q ss_pred ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCC
Q 003127 141 GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDD 220 (845)
Q Consensus 141 g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (845)
|..+.+|+++|.+|.++||.+++++++.+++|+|+..|+++.++++.+++++++++++|.+.. +
T Consensus 286 G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~-------~--------- 349 (713)
T COG2217 286 GSLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFG-------G--------- 349 (713)
T ss_pred ccEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhc-------C---------
Confidence 999999999999999999999999999999999999999999999999999988888654321 0
Q ss_pred hHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEE
Q 003127 221 ALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300 (845)
Q Consensus 221 ~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~ 300 (845)
.++...+..++++++++|||+|.+++|+++..+..+.+++|+++|+.+++|.++++|+++||||||||+|+|+|.++..
T Consensus 350 -~~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~ 428 (713)
T COG2217 350 -GDWETALYRALAVLVIACPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVA 428 (713)
T ss_pred -CcHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEec
Confidence 0355678889999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred cCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceE
Q 003127 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIV 380 (845)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l 380 (845)
.+. + ..+.+..+... ...+.||..+|++++++..+... .+..
T Consensus 429 ~~~--~-----------------e~~~L~laAal-------------E~~S~HPiA~AIv~~a~~~~~~~------~~~~ 470 (713)
T COG2217 429 LDG--D-----------------EDELLALAAAL-------------EQHSEHPLAKAIVKAAAERGLPD------VEDF 470 (713)
T ss_pred CCC--C-----------------HHHHHHHHHHH-------------HhcCCChHHHHHHHHHHhcCCCC------ccce
Confidence 443 0 12233222222 12378999999999988776211 0111
Q ss_pred EEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 381 KVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 381 ~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
+.+| -.++--+.++ ..+.-|++..+.+. +...+ . ..+..+.+.++|..++.++
T Consensus 471 ~~i~------G~Gv~~~v~g---~~v~vG~~~~~~~~--------~~~~~--~-----~~~~~~~~~~~G~t~v~va--- 523 (713)
T COG2217 471 EEIP------GRGVEAEVDG---ERVLVGNARLLGEE--------GIDLP--L-----LSERIEALESEGKTVVFVA--- 523 (713)
T ss_pred eeec------cCcEEEEECC---EEEEEcCHHHHhhc--------CCCcc--c-----hhhhHHHHHhcCCeEEEEE---
Confidence 2222 1122212222 23344776655332 11111 0 3455677777887666555
Q ss_pred cCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc
Q 003127 461 IGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540 (845)
Q Consensus 461 i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~ 540 (845)
.|.+++|+++++|++|++++++|++||+.|++++|+|||+..+|+++|+++||+.
T Consensus 524 -------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~------------ 578 (713)
T COG2217 524 -------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE------------ 578 (713)
T ss_pred -------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh------------
Confidence 4568999999999999999999999999999999999999999999999999975
Q ss_pred cCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEecc
Q 003127 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 541 ~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~ 620 (845)
+++.+.|++|.+.|+.+|++ |+.|+|+|||.||+|+|.+|||||||| +|+|.++++||+++.+
T Consensus 579 ---------------v~AellPedK~~~V~~l~~~-g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA~eaADvvL~~ 641 (713)
T COG2217 579 ---------------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAPALAAADVGIAMG-SGTDVAIEAADVVLMR 641 (713)
T ss_pred ---------------heccCCcHHHHHHHHHHHhc-CCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHHHHhCCEEEec
Confidence 89999999999999999988 999999999999999999999999999 7999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 621 DNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSS 661 (845)
Q Consensus 621 ~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 661 (845)
|++..+.++++.+|++++++++|+.|++.||.+.+.+..+.
T Consensus 642 ~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 642 DDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998887654
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-73 Score=669.10 Aligned_cols=515 Identities=24% Similarity=0.335 Sum_probs=417.9
Q ss_pred HHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCC
Q 003127 7 AVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPG 86 (845)
Q Consensus 7 ~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~G 86 (845)
.+|++.++++| .|.++..++..+.+--++....+.+.++..+++.+ ..+.+++|+|||+++++++++|+||
T Consensus 194 ~~a~~~a~~~~--------~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~-l~p~~a~vir~g~~~~v~~~~l~~G 264 (741)
T PRK11033 194 SVAAIGALFIG--------ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMA-LVPETATRLRDGEREEVAIADLRPG 264 (741)
T ss_pred HHHHHHHHHHc--------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEEECCEEEEEEHHHCCCC
Confidence 34555566655 35555443332222222333333333333444443 4577899999999999999999999
Q ss_pred cEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccC
Q 003127 87 DIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 166 (845)
Q Consensus 87 Dii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 166 (845)
|+|.+++||+|||||++++|+ ..||||+|||||.|+.|..++ .+|+||.+.+|.++++|+++|.+|.++|+.+.+++.
T Consensus 265 Div~v~~G~~IP~Dg~vi~g~-~~vdes~lTGEs~Pv~k~~Gd-~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a 342 (741)
T PRK11033 265 DVIEVAAGGRLPADGKLLSPF-ASFDESALTGESIPVERATGE-KVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEA 342 (741)
T ss_pred CEEEECCCCEEecceEEEECc-EEeecccccCCCCCEecCCCC-eeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHh
Confidence 999999999999999999997 699999999999999998766 599999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHH
Q 003127 167 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLA 246 (845)
Q Consensus 167 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~ 246 (845)
+.+++|+|+.+++++.+++++++.++++++++|...+ +. .+...+..++++++++|||+|.++
T Consensus 343 ~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~-------~~----------~~~~~i~~a~svlviacPcaL~la 405 (741)
T PRK11033 343 EERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF-------AA----------PWQEWIYRGLTLLLIGCPCALVIS 405 (741)
T ss_pred hccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------cC----------CHHHHHHHHHHHHHHhchhhhhhh
Confidence 9889999999999999999999999998888753211 10 234557778999999999999999
Q ss_pred HHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHH
Q 003127 247 VTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASK 326 (845)
Q Consensus 247 ~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (845)
+|+++..+..+++|+|+++|+.+++|+|+++|++|||||||||+|+|+|.++...+.. .+ .+
T Consensus 406 tP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------~~--~~ 467 (741)
T PRK11033 406 TPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI----------------SE--SE 467 (741)
T ss_pred hHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------CH--HH
Confidence 9999999999999999999999999999999999999999999999999988643321 11 12
Q ss_pred HHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEE-EEEEc-CCCeEE
Q 003127 327 LLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMG-VVIEL-PEGGFR 404 (845)
Q Consensus 327 ~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~s-viv~~-~~~~~~ 404 (845)
.+..+.... ..+.||.++|+++++++.+.+ +||.++++.+. ..++. -++..
T Consensus 468 ~l~~aa~~e-------------~~s~hPia~Ai~~~a~~~~~~-------------~~~~~~~~~~~g~Gv~~~~~g~~- 520 (741)
T PRK11033 468 LLALAAAVE-------------QGSTHPLAQAIVREAQVRGLA-------------IPEAESQRALAGSGIEGQVNGER- 520 (741)
T ss_pred HHHHHHHHh-------------cCCCCHHHHHHHHHHHhcCCC-------------CCCCcceEEEeeEEEEEEECCEE-
Confidence 222221111 126799999999998876543 46666666542 22321 12222
Q ss_pred EEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeee
Q 003127 405 VHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGI 484 (845)
Q Consensus 405 ~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~ 484 (845)
+.-|+++.+.+ ++ +.+.+.++++.++|.|++++|+ |.+++|++++
T Consensus 521 -~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~g~~~v~va~----------------~~~~~g~i~l 565 (741)
T PRK11033 521 -VLICAPGKLPP--------------LA----DAFAGQINELESAGKTVVLVLR----------------NDDVLGLIAL 565 (741)
T ss_pred -EEEecchhhhh--------------cc----HHHHHHHHHHHhCCCEEEEEEE----------------CCEEEEEEEE
Confidence 22477765532 11 2244556788999999999984 4589999999
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
+|++|++++++|++|+++|++++|+|||+..++.++|+++|+. .+++..|++
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~----------------------------~~~~~~p~~ 617 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID----------------------------FRAGLLPED 617 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------------------------eecCCCHHH
Confidence 9999999999999999999999999999999999999999995 456789999
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHH
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 644 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i 644 (845)
|.++++.+++. +.|+|+|||.||+|||++||+||||| ++++.++++||+++.++++.++.++++.||++++|+++|+
T Consensus 618 K~~~v~~l~~~--~~v~mvGDgiNDapAl~~A~vgia~g-~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl 694 (741)
T PRK11033 618 KVKAVTELNQH--APLAMVGDGINDAPAMKAASIGIAMG-SGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNI 694 (741)
T ss_pred HHHHHHHHhcC--CCEEEEECCHHhHHHHHhCCeeEEec-CCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999954 58999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q 003127 645 QFQLTVNVVALIVNFS 660 (845)
Q Consensus 645 ~~~l~~n~~~~~~~~~ 660 (845)
.|++.+|.+.+.+.++
T Consensus 695 ~~a~~~n~~~i~~a~~ 710 (741)
T PRK11033 695 TIALGLKAIFLVTTLL 710 (741)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999988877654
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-73 Score=650.37 Aligned_cols=475 Identities=40% Similarity=0.612 Sum_probs=415.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-hhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccC
Q 003127 38 LLVVFVTATSDYKQSLQFKDLDR-EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSL 116 (845)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~L 116 (845)
++..++....+++.++..+++.+ ..++.+++|+|+| +++|++++|+|||+|.+++||+|||||++++|+ +.||||+|
T Consensus 7 l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~g~-~~vdes~L 84 (499)
T TIGR01494 7 LLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLSGS-CFVDESNL 84 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEEcc-EEEEcccc
Confidence 44555666666777777777665 3678899999999 999999999999999999999999999999995 89999999
Q ss_pred CCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHH-HHHHHHHHHHHHHH
Q 003127 117 TGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVA-TIIGKIGLFFAVVT 195 (845)
Q Consensus 117 tGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~ 195 (845)
||||.|+.|.+++. +++||.+.+|+.+++|+++|.+|..+++...+.+....+++++++.+++. .++.++.+.+++++
T Consensus 85 TGEs~pv~k~~g~~-v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~ 163 (499)
T TIGR01494 85 TGESVPVLKTAGDA-VFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAV 163 (499)
T ss_pred cCCCCCeeeccCCc-cccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999987665 99999999999999999999999999999999888777899999999999 78877777777777
Q ss_pred HHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhcc
Q 003127 196 FAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMG 275 (845)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg 275 (845)
++.|..... .. . .+...+..++++++++|||+|++++++++..+..+++++|+++|+++++|+||
T Consensus 164 ~~~~~~~~~-----~~-------~---~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~ 228 (499)
T TIGR01494 164 FLFWAIGLW-----DP-------N---SIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELG 228 (499)
T ss_pred HHHHHHHHc-----cc-------c---cHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhcc
Confidence 666543210 00 0 25567888999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCch
Q 003127 276 SATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPT 355 (845)
Q Consensus 276 ~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~ 355 (845)
++|++|||||||||+|+|++.+++..+. .+.++||.
T Consensus 229 ~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------------------~~~s~hp~ 264 (499)
T TIGR01494 229 KVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------------------EYLSGHPD 264 (499)
T ss_pred CCcEEEeeCCCccccCceEEEEEEecCC--------------------------------------------CcCCCChH
Confidence 9999999999999999999998865321 01267999
Q ss_pred HHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHH
Q 003127 356 ETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAA 435 (845)
Q Consensus 356 e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~ 435 (845)
|.|++++++... ++..||++.+++|+++++.+++ .++||+++.+.+.|..
T Consensus 265 ~~ai~~~~~~~~------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~--------------- 314 (499)
T TIGR01494 265 ERALVKSAKWKI------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD--------------- 314 (499)
T ss_pred HHHHHHHhhhcC------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH---------------
Confidence 999999886421 2468999999999999986433 3689999999988752
Q ss_pred HHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHH
Q 003127 436 VNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNIN 515 (845)
Q Consensus 436 ~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ 515 (845)
+.+..++++++|+|++++|++. +++|++.++|++|++++++|+.|+++|++++|+|||+..
T Consensus 315 ---~~~~~~~~~~~g~~~~~~a~~~----------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~ 375 (499)
T TIGR01494 315 ---LEEKVKELAQSGLRVLAVASKE----------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVL 375 (499)
T ss_pred ---HHHHHHHHHhCCCEEEEEEECC----------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHH
Confidence 1233456788999999999652 699999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHh
Q 003127 516 TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHE 595 (845)
Q Consensus 516 ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~ 595 (845)
++..+|+++|+ +++.+|++|.++++.+|+. |+.|+|+|||.||++|+++
T Consensus 376 ~a~~ia~~lgi------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~al~~ 424 (499)
T TIGR01494 376 TAKAIAKELGI------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPALKK 424 (499)
T ss_pred HHHHHHHHcCc------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHHHHh
Confidence 99999999985 4789999999999999988 8999999999999999999
Q ss_pred CCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 596 ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 596 A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 660 (845)
||+||||+ ++++||+++.++++..+..++.+||+.++++++++.|.+++|++.+.+.++
T Consensus 425 Advgia~~------a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 425 ADVGIAMG------AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred CCCccccc------hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997 588999999999999999999999999999999999999999998877765
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-72 Score=612.18 Aligned_cols=757 Identities=22% Similarity=0.273 Sum_probs=542.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCeeEEEECCeEEEEecCCcCCCcEEEEcC---CCeeeccE
Q 003127 26 GAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDRE-KKKITVQVARNGFRRKISIYDLLPGDIVHLCM---GDQVPADG 101 (845)
Q Consensus 26 ~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~---G~~iPaD~ 101 (845)
-|+.+ ++.+++++.+.+..-+++-++....++. ..+..+.|+|+++|+.+..+||.|||+|.+.. ...||||.
T Consensus 216 yWYyS---lFtLfMli~fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDl 292 (1160)
T KOG0209|consen 216 YWYYS---LFTLFMLIAFEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDL 292 (1160)
T ss_pred HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceE
Confidence 36554 3455666667776667777777777763 44678999999999999999999999999998 57899999
Q ss_pred EEEeeCceeEecccCCCCCCcccccC----------------CCCeEEeccEEE-------------eceEEEEEEEEee
Q 003127 102 LFVSGFSVLINESSLTGESEPVNVNA----------------LNPFLLSGTKVQ-------------NGSCKMLVTTVGM 152 (845)
Q Consensus 102 ~ll~~~~~~Vdes~LtGEs~p~~k~~----------------~~~~v~~Gt~v~-------------~g~~~~~V~~tG~ 152 (845)
+++.|+ |.|||++|||||.|.-|++ +..++|+||+++ +|.+.+.|.+||.
T Consensus 293 lLL~Gs-ciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGF 371 (1160)
T KOG0209|consen 293 LLLRGS-CIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGF 371 (1160)
T ss_pred EEEecc-eeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccc
Confidence 999996 8999999999999998842 234799999998 4568899999999
Q ss_pred cchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHH
Q 003127 153 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAV 232 (845)
Q Consensus 153 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (845)
+|..|++.+.+....++-|.-.+. .+.+++.+++|.+...++.+.. |. .+...+=.+.|.-++
T Consensus 372 eTSQGkLvRtilf~aervTaNn~E---------tf~FILFLlVFAiaAa~Yvwv~---Gs-----kd~~RsrYKL~LeC~ 434 (1160)
T KOG0209|consen 372 ETSQGKLVRTILFSAERVTANNRE---------TFIFILFLLVFAIAAAGYVWVE---GS-----KDPTRSRYKLFLECT 434 (1160)
T ss_pred cccCCceeeeEEecceeeeeccHH---------HHHHHHHHHHHHHHhhheEEEe---cc-----cCcchhhhheeeeee
Confidence 999999998887766654543322 1223334444444443333221 11 011112234556677
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCC
Q 003127 233 TIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKG 312 (845)
Q Consensus 233 ~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~ 312 (845)
.++...+|+.||+-++++.-.+...++|.+++|..+-.+.-.|++|+.|||||||||+..|.|.++-...... .
T Consensus 435 LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~------~ 508 (1160)
T KOG0209|consen 435 LILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADE------G 508 (1160)
T ss_pred EEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCc------c
Confidence 7888899999999999999999999999999999999999999999999999999999999999876422211 0
Q ss_pred CCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCC---h---HHhhhhcceEEEecCC
Q 003127 313 TPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGD---F---QAERQASKIVKVEPFN 386 (845)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~---~---~~~~~~~~~l~~~~F~ 386 (845)
.....+..+.+... .+..||+.....+ ...|||.|+|.++.....--. . +...+..++.+.+.|+
T Consensus 509 ~~~~~s~~p~~t~~----vlAscHsLv~le~-----~lVGDPlEKA~l~~v~W~~~k~~~v~p~~~~~~~lkI~~ryhFs 579 (1160)
T KOG0209|consen 509 ALTPASKAPNETVL----VLASCHSLVLLED-----KLVGDPLEKATLEAVGWNLEKKNSVCPREGNGKKLKIIQRYHFS 579 (1160)
T ss_pred cccchhhCCchHHH----HHHHHHHHHHhcC-----cccCChHHHHHHHhcCcccccCcccCCCcCCCcccchhhhhhHH
Confidence 00111222333333 3445555443322 268999999999876211100 0 1111246778899999
Q ss_pred CCCceEEEEEEcCC----CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecC
Q 003127 387 SVKKQMGVVIELPE----GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIG 462 (845)
Q Consensus 387 s~~k~~sviv~~~~----~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~ 462 (845)
|+.||||++.+..+ .++.+.+|||||+|-++.++. .+.+++..++|+++|.||+|++||+++
T Consensus 580 SaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dv--------------P~dY~~iYk~ytR~GsRVLALg~K~l~ 645 (1160)
T KOG0209|consen 580 SALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDV--------------PKDYDEIYKRYTRQGSRVLALGYKPLG 645 (1160)
T ss_pred HHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhC--------------chhHHHHHHHHhhccceEEEEeccccc
Confidence 99999999998543 368899999999998876532 245778899999999999999999998
Q ss_pred CC-----CCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc------
Q 003127 463 NE-----FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG------ 531 (845)
Q Consensus 463 ~~-----~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~------ 531 (845)
.- .+.+++.+|.|++|.|++.+..|++++++++|+.|++++++++|+|||++.||.++|+++|+.....
T Consensus 646 ~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~ 725 (1160)
T KOG0209|consen 646 DMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLP 725 (1160)
T ss_pred ccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccC
Confidence 43 2345678999999999999999999999999999999999999999999999999999999975422
Q ss_pred -----------------------------------eeeeCcccccCCH-HHHhhhcCCeeEEEEeChhcHHHHHHHHHhh
Q 003127 532 -----------------------------------IAIEGPEFREKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTT 575 (845)
Q Consensus 532 -----------------------------------~~i~g~~~~~~~~-~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 575 (845)
++++|+.+..+.. +.+.++++.+.||||+.|.||..++..+++.
T Consensus 726 ~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~ 805 (1160)
T KOG0209|consen 726 EEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKL 805 (1160)
T ss_pred ccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhc
Confidence 2334444433322 2456677889999999999999999999998
Q ss_pred cCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHH---------------------------------------------
Q 003127 576 LGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA--------------------------------------------- 610 (845)
Q Consensus 576 ~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~a--------------------------------------------- 610 (845)
|+.++|+|||.||+.|||+||||||+-+|..|..
T Consensus 806 -Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 884 (1160)
T KOG0209|consen 806 -GYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKT 884 (1160)
T ss_pred -CeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCCCCccccChhHHHH
Confidence 9999999999999999999999999863332100
Q ss_pred -------------------------HhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 611 -------------------------KESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLT 665 (845)
Q Consensus 611 -------------------------k~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~ 665 (845)
.-+|.+.....+.+++.+.|++||+..-+.-+++... .-|..... ..++.++.
T Consensus 885 ~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKIL-ALN~LisA-YslSvlyl 962 (1160)
T KOG0209|consen 885 RERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKIL-ALNCLISA-YSLSVLYL 962 (1160)
T ss_pred HHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHH-HHHHHHHH-HHHHHhhh
Confidence 0123344444467789999999999988776666543 23332221 22235556
Q ss_pred CCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhcccc----
Q 003127 666 GNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAV---- 741 (845)
Q Consensus 666 ~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 741 (845)
-+.-|+..|...--++.. ...+.+...+|-+.+.++.|. .+++|...+.+++.|..++...++|+.......
T Consensus 963 dGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~~~p~~ 1038 (1160)
T KOG0209|consen 963 DGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLVYITGEAYKLEPPE 1038 (1160)
T ss_pred cCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHhcCCcc
Confidence 667788888766554443 335666677888888888884 458999988889988888888777765432211
Q ss_pred c--cCCCCCccchhhhHHHHHHHHHHHhc-ccccccccccccccCCchhHHHHHHHHHHHHHHHHHH----HHhhhcccc
Q 003127 742 F--RLDGPDPDLILNTLIFNTFVFCQVFN-EISSREMEKINVFKGILKNYVFVAVLTCTVLFQIIII----ELLGTFANT 814 (845)
Q Consensus 742 ~--~~~~~~~~~~~~t~~f~~~v~~q~~~-~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~v----~~~~~~f~~ 814 (845)
- ....+...+...|.+|..-...|+.. +.| +...||....+.|+-+..+++.+..+.+... |=++.-|.+
T Consensus 1039 ~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVN---Y~G~PF~Esl~eNK~l~y~ll~~~~~~~~l~tg~~peLn~~~~l 1115 (1160)
T KOG0209|consen 1039 EKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVN---YQGRPFRESLRENKGLLYGLLGSAGVIIALATGSSPELNEKFEL 1115 (1160)
T ss_pred cccChhcccChhhhhhHHHHHHHHHHHHHhhhh---ccCcchhhhhhhccchHHHHHHHHHHHHHHHhccChhHHhheee
Confidence 0 11111233456677776555556543 233 3355677788899988888876655533222 335678888
Q ss_pred cCCChHHH----HHHHHHHHHHHHHHHHHhhc
Q 003127 815 TPLNLQQW----FVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 815 ~~l~~~~w----~~~~~~~~~~~~~~~i~K~~ 842 (845)
++++-.+= .+.++--+++++++.+.|++
T Consensus 1116 V~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~ 1147 (1160)
T KOG0209|consen 1116 VDMPQDFKIKLLAVLVLDFVLCYLVERVLKFF 1147 (1160)
T ss_pred ecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88873322 22333345567778777765
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-72 Score=646.73 Aligned_cols=524 Identities=28% Similarity=0.406 Sum_probs=424.6
Q ss_pred HHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECC-eEEEEecCCc
Q 003127 5 ILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNG-FRRKISIYDL 83 (845)
Q Consensus 5 il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g-~~~~i~~~~l 83 (845)
++.++++++++++ .|.++..+++.+++.-++....+.+.++..+++.+ .++.+++|+||| +++++++++|
T Consensus 4 l~~~~~~~~~~~~--------~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~-~~~~~~~v~r~~g~~~~i~~~~l 74 (556)
T TIGR01525 4 LMALATIAAYAMG--------LVLEGALLLFLFLLGETLEERAKGRASDALSALLA-LAPSTARVLQGDGSEEEVPVEEL 74 (556)
T ss_pred HHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCCeEEEEEHHHC
Confidence 4566777888877 46677666555555555555555555555555543 456789999996 9999999999
Q ss_pred CCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhh
Q 003127 84 LPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 163 (845)
Q Consensus 84 ~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 163 (845)
+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|+++|.+|++|++.+.+
T Consensus 75 ~~GDiv~v~~G~~iP~Dg~vi~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~ 152 (556)
T TIGR01525 75 QVGDIVIVRPGERIPVDGVVISGE-SEVDESALTGESMPVEKKEGD-EVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLV 152 (556)
T ss_pred CCCCEEEECCCCEeccceEEEecc-eEEeehhccCCCCCEecCCcC-EEeeceEECCceEEEEEEEecccCHHHHHHHHH
Confidence 999999999999999999999997 699999999999999998755 699999999999999999999999999999999
Q ss_pred ccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCch
Q 003127 164 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGL 243 (845)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l 243 (845)
.+.+.+++|+++.+++++++++++++++++++++++... +. . ..+..++++++++|||+|
T Consensus 153 ~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~--------~~----------~--~~~~~~~~vlv~~~P~al 212 (556)
T TIGR01525 153 EEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL--------GA----------L--GALYRALAVLVVACPCAL 212 (556)
T ss_pred HHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cc----------c--hHHHHHHHHHhhccccch
Confidence 888888899999999999999999888888887765321 00 1 466778999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChh
Q 003127 244 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPAS 323 (845)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (845)
++++++++..+.++++++|+++|+++++|+||++|++|||||||||+|+|++.++...+... . .
T Consensus 213 ~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--------------~--~ 276 (556)
T TIGR01525 213 GLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS--------------I--S 276 (556)
T ss_pred hehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------c--c
Confidence 99999999999999999999999999999999999999999999999999999987543211 0 0
Q ss_pred HHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeE
Q 003127 324 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF 403 (845)
Q Consensus 324 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~ 403 (845)
..+.+..+.... ..+.||.+.|+++++++.+.+... .+ ..+. .++.++
T Consensus 277 ~~~~l~~a~~~e-------------~~~~hp~~~Ai~~~~~~~~~~~~~---~~-~~~~---------------~~~~gi 324 (556)
T TIGR01525 277 EEELLALAAALE-------------QSSSHPLARAIVRYAKKRGLELPK---QE-DVEE---------------VPGKGV 324 (556)
T ss_pred HHHHHHHHHHHh-------------ccCCChHHHHHHHHHHhcCCCccc---cc-CeeE---------------ecCCeE
Confidence 112221111111 125799999999999887654221 00 0111 122334
Q ss_pred EEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEee
Q 003127 404 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 483 (845)
Q Consensus 404 ~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~ 483 (845)
..+++|+++..+..|+.. ..++.. ....++..++++++|+|++.++. |.+++|.+.
T Consensus 325 ~~~~~g~~~~~lg~~~~~-~~~~~~-------~~~~~~~~~~~~~~g~~~~~v~~----------------~~~~~g~i~ 380 (556)
T TIGR01525 325 EATVDGQEEVRIGNPRLL-ELAAEP-------ISASPDLLNEGESQGKTVVFVAV----------------DGELLGVIA 380 (556)
T ss_pred EEEECCeeEEEEecHHHH-hhcCCC-------chhhHHHHHHHhhCCcEEEEEEE----------------CCEEEEEEE
Confidence 444455444444444321 111111 11223456678889999988873 458999999
Q ss_pred ecCCCChhHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 484 IKDPMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++|+++|+++++|++|+++| ++++++|||+..++.++++++|+.. +|+++.|
T Consensus 381 ~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 433 (556)
T TIGR01525 381 LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------------------------VHAELLP 433 (556)
T ss_pred ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe---------------------------eeccCCH
Confidence 99999999999999999999 9999999999999999999999964 7889999
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 642 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~ 642 (845)
++|.++++.+++. ++.++|+|||.||++|+++||+|++|| ++++.+++.||+++.+++++++.++++.||+.++|+++
T Consensus 434 ~~K~~~v~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~ 511 (556)
T TIGR01525 434 EDKLAIVKELQEE-GGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQ 511 (556)
T ss_pred HHHHHHHHHHHHc-CCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987 889999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003127 643 FVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 643 ~i~~~l~~n~~~~~~~~~ 660 (845)
++.|++.+|++.+.+.++
T Consensus 512 nl~~a~~~N~~~i~~a~~ 529 (556)
T TIGR01525 512 NLAWALGYNLVAIPLAAG 529 (556)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999877654
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-70 Score=631.17 Aligned_cols=505 Identities=27% Similarity=0.351 Sum_probs=411.3
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCc
Q 003127 4 MILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDL 83 (845)
Q Consensus 4 ~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l 83 (845)
.++.+++++++++| .|.++..+++.+++..++....+.+.++..+++.+ .++.+++|+|||+++++++++|
T Consensus 3 ~l~~~a~~~~~~~~--------~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~-~~~~~~~v~r~g~~~~i~~~~l 73 (536)
T TIGR01512 3 LLMALAALGAVAIG--------EYLEGALLLLLFSIGETLEEYASGRARRALKALME-LAPDTARVLRGGSLEEVAVEEL 73 (536)
T ss_pred HHHHHHHHHHHHHh--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEEECCEEEEEEHHHC
Confidence 35678888888887 58888766655555555555555555555555554 4577899999999999999999
Q ss_pred CCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhh
Q 003127 84 LPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 163 (845)
Q Consensus 84 ~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 163 (845)
+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|.+++ .+|+||.+.+|+++++|++||.+|.+||+.+.+
T Consensus 74 ~~GDiv~v~~G~~iP~Dg~ii~g~-~~vdes~lTGEs~pv~k~~g~-~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~ 151 (536)
T TIGR01512 74 KVGDVVVVKPGERVPVDGVVLSGT-STVDESALTGESVPVEKAPGD-EVFAGAINLDGVLTIVVTKLPADSTIAKIVNLV 151 (536)
T ss_pred CCCCEEEEcCCCEeecceEEEeCc-EEEEecccCCCCCcEEeCCCC-EEEeeeEECCceEEEEEEEeccccHHHHHHHHH
Confidence 999999999999999999999996 699999999999999998755 699999999999999999999999999999999
Q ss_pred ccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCch
Q 003127 164 SEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGL 243 (845)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l 243 (845)
.+.+.+++|+++.+++++++++++++.+++++++++.. .. . +...+..++++++++|||+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~------------~~~~~~~~~svlv~~~P~aL 212 (536)
T TIGR01512 152 EEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---LK----R------------WPFWVYRALVLLVVASPCAL 212 (536)
T ss_pred HHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc----c------------cHHHHHHHHHHHhhcCcccc
Confidence 98888889999999999999999888877766665421 10 0 01156678899999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChh
Q 003127 244 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPAS 323 (845)
Q Consensus 244 ~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (845)
++++++++..+..+++++|+++|+++++|++|++|++|||||||||+|+|++.++...
T Consensus 213 ~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------- 270 (536)
T TIGR01512 213 VISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------- 270 (536)
T ss_pred ccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------------
Confidence 9999999999999999999999999999999999999999999999999999887421
Q ss_pred HHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeE
Q 003127 324 ASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF 403 (845)
Q Consensus 324 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~ 403 (845)
+.+..+.... ..+.||.+.|+++++++.+ . .......|- +.+... .++..
T Consensus 271 --~~l~~a~~~e-------------~~~~hp~~~Ai~~~~~~~~-~-------~~~~~~~~g----~gi~~~--~~g~~- 320 (536)
T TIGR01512 271 --EVLRLAAAAE-------------QASSHPLARAIVDYARKRE-N-------VESVEEVPG----EGVRAV--VDGGE- 320 (536)
T ss_pred --HHHHHHHHHh-------------ccCCCcHHHHHHHHHHhcC-C-------CcceEEecC----CeEEEE--ECCeE-
Confidence 1222221111 1267999999999987653 1 111111221 111111 12222
Q ss_pred EEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEee
Q 003127 404 RVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVG 483 (845)
Q Consensus 404 ~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~ 483 (845)
+..|+++.+.+. +. .++..+|.+++.++ .|..+.|.+.
T Consensus 321 --~~ig~~~~~~~~--------~~----------------~~~~~~~~~~~~v~----------------~~~~~~g~i~ 358 (536)
T TIGR01512 321 --VRIGNPRSLEAA--------VG----------------ARPESAGKTIVHVA----------------RDGTYLGYIL 358 (536)
T ss_pred --EEEcCHHHHhhc--------CC----------------cchhhCCCeEEEEE----------------ECCEEEEEEE
Confidence 224766433211 10 03444565554333 4678999999
Q ss_pred ecCCCChhHHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 484 IKDPMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi-~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++|+++|+++++|++|+++|+ +++++|||+..++.++++++|+.. +|++..|
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~---------------------------~f~~~~p 411 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE---------------------------VHAELLP 411 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh---------------------------hhhccCc
Confidence 999999999999999999999 999999999999999999999964 6788899
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQK 642 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~ 642 (845)
++|.++++.++++ ++.++|+|||.||++|+++||+||+||.++++.+++.||+++.+++++.+.++++.||++++++++
T Consensus 412 ~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~ 490 (536)
T TIGR01512 412 EDKLEIVKELREK-YGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQ 490 (536)
T ss_pred HHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988 899999999999999999999999999668899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 003127 643 FVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 643 ~i~~~l~~n~~~~~~~~~ 660 (845)
++.|++.+|++.+.+.++
T Consensus 491 nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 491 NVVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999998877664
|
. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-71 Score=619.73 Aligned_cols=506 Identities=25% Similarity=0.329 Sum_probs=417.0
Q ss_pred HHHHHHHHHHHHh----h--hhcCCeeEEEECCe-EEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCC
Q 003127 47 SDYKQSLQFKDLD----R--EKKKITVQVARNGF-RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGE 119 (845)
Q Consensus 47 ~~~~~~~~~~~l~----~--~~~~~~~~V~r~g~-~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGE 119 (845)
.+|.+.++..+.. + ...+.++.++.+|+ +++|+.+.+++||+|++.||++||+||++++|+ ++||||.+|||
T Consensus 354 gr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv~Gs-s~VDEs~iTGE 432 (951)
T KOG0207|consen 354 GRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVVDGS-SEVDESLITGE 432 (951)
T ss_pred HHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEEeCc-eeechhhccCC
Confidence 4555555544432 1 34577899999996 899999999999999999999999999999997 59999999999
Q ss_pred CCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 120 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVM 199 (845)
Q Consensus 120 s~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~ 199 (845)
+.|++|+.++ .+.+||.+.+|.....++++|.||.+++|.+++++++..+.|+|+.+|+++.+++++++++++.++++|
T Consensus 433 s~PV~Kk~gs-~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w 511 (951)
T KOG0207|consen 433 SMPVPKKKGS-TVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVW 511 (951)
T ss_pred ceecccCCCC-eeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHH
Confidence 9999998766 499999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEE
Q 003127 200 VQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATS 279 (845)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~ 279 (845)
+....+... . .......+...|..++++++++|||+|.++.|++...+....+++|+++|..+.+|.+.++++
T Consensus 512 ~~~g~~~~~---~----~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~t 584 (951)
T KOG0207|consen 512 ILIGKIVFK---Y----PRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKT 584 (951)
T ss_pred HHHcccccc---C----cchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCE
Confidence 764332111 0 111114677788999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHH
Q 003127 280 ICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 359 (845)
Q Consensus 280 i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al 359 (845)
++||||||||+|+++|.++....+.. ...+.+.-.... +..+.||...|+
T Consensus 585 VvFDKTGTLT~G~~~V~~~~~~~~~~-----------------~~~e~l~~v~a~-------------Es~SeHPig~AI 634 (951)
T KOG0207|consen 585 VVFDKTGTLTEGKPTVVDFKSLSNPI-----------------SLKEALALVAAM-------------ESGSEHPIGKAI 634 (951)
T ss_pred EEEcCCCceecceEEEEEEEecCCcc-----------------cHHHHHHHHHHH-------------hcCCcCchHHHH
Confidence 99999999999999999987655421 111222111111 112679999999
Q ss_pred HHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHH
Q 003127 360 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 439 (845)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~ 439 (845)
+++|+...... .....+....|..+... +-+...+++ .+-|.-+- +.+++...+ +.+
T Consensus 635 v~yak~~~~~~----~~~~~~~~~~~pg~g~~--~~~~~~~~~---i~iGN~~~--------~~r~~~~~~------~~i 691 (951)
T KOG0207|consen 635 VDYAKEKLVEP----NPEGVLSFEYFPGEGIY--VTVTVDGNE---VLIGNKEW--------MSRNGCSIP------DDI 691 (951)
T ss_pred HHHHHhccccc----CccccceeecccCCCcc--cceEEeeeE---EeechHHH--------HHhcCCCCc------hhH
Confidence 99999876211 11112222233332222 112221222 33355433 333444332 347
Q ss_pred HHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q 003127 440 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKA 519 (845)
Q Consensus 440 ~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ 519 (845)
++.+++....|..+.+++ -|.+++|++.++|++|+++..+|+.||+.|++++|+|||+..+|++
T Consensus 692 ~~~~~~~e~~g~tvv~v~----------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~s 755 (951)
T KOG0207|consen 692 LDALTESERKGQTVVYVA----------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARS 755 (951)
T ss_pred HHhhhhHhhcCceEEEEE----------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHH
Confidence 778888888998888777 4678999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 003127 520 IARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 520 ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
+|+++|+.. |+++..|+||.+.++.+|++ +..|+|+|||.||.|+|.+||+|
T Consensus 756 vA~~VGi~~---------------------------V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaPALA~AdVG 807 (951)
T KOG0207|consen 756 VAQQVGIDN---------------------------VYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAPALAQADVG 807 (951)
T ss_pred HHHhhCcce---------------------------EEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccHHHHhhccc
Confidence 999999764 99999999999999999999 89999999999999999999999
Q ss_pred EEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 600 LAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659 (845)
Q Consensus 600 Iamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 659 (845)
|||| .|++.|.++||+++.+|++.++..++..+|++..|++.|+.|++.||++.+.+..
T Consensus 808 Iaig-~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAa 866 (951)
T KOG0207|consen 808 IAIG-AGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAA 866 (951)
T ss_pred eeec-cccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhe
Confidence 9999 8899999999999999999999999999999999999999999999999887765
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-69 Score=619.34 Aligned_cols=460 Identities=28% Similarity=0.394 Sum_probs=382.8
Q ss_pred hcCCeeEEEEC-CeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEe
Q 003127 62 KKKITVQVARN-GFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQN 140 (845)
Q Consensus 62 ~~~~~~~V~r~-g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~ 140 (845)
..+.+++++|+ |++++++.++|+|||+|.+++||+|||||++++|+ +.||||.|||||.|+.|..++ .+|+||.+.+
T Consensus 88 ~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~g~-~~vdes~lTGEs~pv~k~~gd-~V~aGt~~~~ 165 (562)
T TIGR01511 88 LQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIEGE-SEVDESLVTGESLPVPKKVGD-PVIAGTVNGT 165 (562)
T ss_pred cCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEECc-eEEehHhhcCCCCcEEcCCCC-EEEeeeEECC
Confidence 45678888885 67799999999999999999999999999999997 699999999999999998766 5999999999
Q ss_pred ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCC
Q 003127 141 GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDD 220 (845)
Q Consensus 141 g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (845)
|+++++|+++|.+|.+||+.+.+.+++.+++++++..+++++++++.+++++++++++|.
T Consensus 166 g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~-------------------- 225 (562)
T TIGR01511 166 GSLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIWL-------------------- 225 (562)
T ss_pred ceEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------
Confidence 999999999999999999999999988889999999999999999988888877766532
Q ss_pred hHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEE
Q 003127 221 ALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300 (845)
Q Consensus 221 ~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~ 300 (845)
..+..++++++++|||+|++++|+++..+..+++++|+++|+.+++|+|+++|++|||||||||+|+|++.++..
T Consensus 226 -----~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~ 300 (562)
T TIGR01511 226 -----FALEFAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHV 300 (562)
T ss_pred -----HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEec
Confidence 245668999999999999999999999999999999999999999999999999999999999999999998864
Q ss_pred cCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceE
Q 003127 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIV 380 (845)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l 380 (845)
.+.. . ..+.+..+...+ ..+.||.++|+++++++.+..... ....
T Consensus 301 ~~~~----------------~--~~~~l~~aa~~e-------------~~s~HPia~Ai~~~~~~~~~~~~~----~~~~ 345 (562)
T TIGR01511 301 FGDR----------------D--RTELLALAAALE-------------AGSEHPLAKAIVSYAKEKGITLVE----VSDF 345 (562)
T ss_pred CCCC----------------C--HHHHHHHHHHHh-------------ccCCChHHHHHHHHHHhcCCCcCC----CCCe
Confidence 3321 0 112222222211 125699999999999877643211 1111
Q ss_pred EEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 381 KVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 381 ~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
+.+| .+.+.. ..++. -+..|+++.+.+ ++.. ++ ++.++|.+++.++
T Consensus 346 ~~~~----g~Gi~~--~~~g~---~~~iG~~~~~~~--------~~~~--~~------------~~~~~g~~~~~~~--- 391 (562)
T TIGR01511 346 KAIP----GIGVEG--TVEGT---KIQLGNEKLLGE--------NAIK--ID------------GKAEQGSTSVLVA--- 391 (562)
T ss_pred EEEC----CceEEE--EECCE---EEEEECHHHHHh--------CCCC--CC------------hhhhCCCEEEEEE---
Confidence 1111 122222 22221 234577765432 1111 11 1235677666554
Q ss_pred cCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc
Q 003127 461 IGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540 (845)
Q Consensus 461 i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~ 540 (845)
.|.+++|.+.++|+++|+++++|++|++.|++++|+|||+..++.++++++|+.
T Consensus 392 -------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------- 445 (562)
T TIGR01511 392 -------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------- 445 (562)
T ss_pred -------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-------------
Confidence 467899999999999999999999999999999999999999999999999994
Q ss_pred cCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEecc
Q 003127 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 541 ~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~ 620 (845)
++++..|++|.++++.++++ ++.++|+|||.||++|+++||+||+|| ++++.+++.||+++.+
T Consensus 446 ---------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a~~~Advvl~~ 508 (562)
T TIGR01511 446 ---------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDAPALAQADVGIAIG-AGTDVAIEAADVVLMR 508 (562)
T ss_pred ---------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHHHhhCCEEEeC
Confidence 56778999999999999988 899999999999999999999999999 8899999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 621 DNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 621 ~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 660 (845)
++++.+.++++.||++++++++|+.|++.+|++.+.+.+.
T Consensus 509 ~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~ 548 (562)
T TIGR01511 509 NDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAG 548 (562)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999998876653
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-68 Score=637.82 Aligned_cols=474 Identities=26% Similarity=0.370 Sum_probs=398.0
Q ss_pred hcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEec
Q 003127 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNG 141 (845)
Q Consensus 62 ~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g 141 (845)
..+.+++|+|||++++|+.++|+|||+|.+++||+|||||++++|+ ..||||+|||||.|+.|..++ .+|+||.+.+|
T Consensus 320 l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~g~-~~vdeS~lTGEs~pv~k~~gd-~V~aGt~~~~G 397 (834)
T PRK10671 320 LTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQGE-AWLDEAMLTGEPIPQQKGEGD-SVHAGTVVQDG 397 (834)
T ss_pred cCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEEce-EEEeehhhcCCCCCEecCCCC-EEEecceecce
Confidence 4577899999999999999999999999999999999999999996 699999999999999998766 59999999999
Q ss_pred eEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCh
Q 003127 142 SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDA 221 (845)
Q Consensus 142 ~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (845)
.++++|+++|.+|.++|+.+++++++..++++|+..++++.++++++++++++++++|... +. .
T Consensus 398 ~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~--------~~--------~ 461 (834)
T PRK10671 398 SVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF--------GP--------A 461 (834)
T ss_pred eEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------CC--------c
Confidence 9999999999999999999999998888899999999999999999988888887765421 10 0
Q ss_pred HHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEc
Q 003127 222 LEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301 (845)
Q Consensus 222 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~ 301 (845)
..+...+..++++++++|||+|++++|+++..+..+++++|+++|+.+++|+++++|++|||||||||+|+|+|.++...
T Consensus 462 ~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~ 541 (834)
T PRK10671 462 PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTF 541 (834)
T ss_pred hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEcc
Confidence 02455677899999999999999999999999999999999999999999999999999999999999999999887643
Q ss_pred CeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEE
Q 003127 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVK 381 (845)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~ 381 (845)
+.. . ..+.+..+...+. .+.||.++|+++++...... .
T Consensus 542 ~~~----------------~--~~~~l~~a~~~e~-------------~s~hp~a~Ai~~~~~~~~~~-----------~ 579 (834)
T PRK10671 542 NGV----------------D--EAQALRLAAALEQ-------------GSSHPLARAILDKAGDMTLP-----------Q 579 (834)
T ss_pred CCC----------------C--HHHHHHHHHHHhC-------------CCCCHHHHHHHHHHhhCCCC-----------C
Confidence 211 0 1222322322222 15799999999987643211 0
Q ss_pred EecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeec
Q 003127 382 VEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI 461 (845)
Q Consensus 382 ~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i 461 (845)
..+|+....+ ++-... ++. .+..|+++.+.+. + +. ++.+.+..+++.++|.+++.+++
T Consensus 580 ~~~~~~~~g~-Gv~~~~-~g~--~~~~G~~~~~~~~--------~----~~---~~~~~~~~~~~~~~g~~~v~va~--- 637 (834)
T PRK10671 580 VNGFRTLRGL-GVSGEA-EGH--ALLLGNQALLNEQ--------Q----VD---TKALEAEITAQASQGATPVLLAV--- 637 (834)
T ss_pred cccceEecce-EEEEEE-CCE--EEEEeCHHHHHHc--------C----CC---hHHHHHHHHHHHhCCCeEEEEEE---
Confidence 1123222211 111112 222 2456998866331 1 11 12355667788889999888874
Q ss_pred CCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccccc
Q 003127 462 GNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541 (845)
Q Consensus 462 ~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~ 541 (845)
|..++|.+.++|+++|+++++|++|++.|++++|+|||+..++.++++++|+..
T Consensus 638 -------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------- 691 (834)
T PRK10671 638 -------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------- 691 (834)
T ss_pred -------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-------------
Confidence 446899999999999999999999999999999999999999999999999964
Q ss_pred CCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccC
Q 003127 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 621 (845)
Q Consensus 542 ~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~ 621 (845)
++++..|++|.++++.++.+ ++.|+|+|||.||++|+++||+||||| ++++.++++||+++.++
T Consensus 692 --------------~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~a~~~ad~vl~~~ 755 (834)
T PRK10671 692 --------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDAPALAQADVGIAMG-GGSDVAIETAAITLMRH 755 (834)
T ss_pred --------------EEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHHHHHhCCEEEecC
Confidence 78899999999999999988 899999999999999999999999999 89999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 622 NFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659 (845)
Q Consensus 622 ~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 659 (845)
+++++.++++.||+.+.++++|+.|++.||++.+.+..
T Consensus 756 ~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 756 SLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999887664
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-58 Score=482.56 Aligned_cols=525 Identities=26% Similarity=0.382 Sum_probs=399.8
Q ss_pred HHHHHHHHHHHHHHhhccc---CCCCCchhHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhhhcCCeeEEEEC-Ce
Q 003127 3 LMILAVCALVSLVVGIATE---GWPKGAHDGLGIVMSILLVVFV----TATSDYKQSLQFKDLDREKKKITVQVARN-GF 74 (845)
Q Consensus 3 ~~il~~~a~ls~~~~~~~~---~~~~~~~~~~~i~~~l~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~V~r~-g~ 74 (845)
+++.+++++++.++.+.+. .....+.....+.+.+.+.+++ +++.|.+.+.+...+++......++++++ |.
T Consensus 35 MFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~ 114 (681)
T COG2216 35 MFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGS 114 (681)
T ss_pred EEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCC
Confidence 3445556666654333221 1111233333333333444433 34455555555566665444556677776 89
Q ss_pred EEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCC--eEEeccEEEeceEEEEEEEEee
Q 003127 75 RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNP--FLLSGTKVQNGSCKMLVTTVGM 152 (845)
Q Consensus 75 ~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~--~v~~Gt~v~~g~~~~~V~~tG~ 152 (845)
++.+++.+|+.||+|.++.||.||+||.+++|. .+||||++||||.|+.|+.+++ -+-.||.+.+.+.+.++++...
T Consensus 115 ~~~v~st~Lk~gdiV~V~age~IP~DGeVIeG~-asVdESAITGESaPViresGgD~ssVtGgT~v~SD~l~irita~pG 193 (681)
T COG2216 115 IEMVPATELKKGDIVLVEAGEIIPSDGEVIEGV-ASVDESAITGESAPVIRESGGDFSSVTGGTRVLSDWLKIRITANPG 193 (681)
T ss_pred eeeccccccccCCEEEEecCCCccCCCeEEeee-eecchhhccCCCcceeeccCCCcccccCCcEEeeeeEEEEEEcCCC
Confidence 999999999999999999999999999999997 5999999999999999987743 2889999999999999999999
Q ss_pred cchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHH
Q 003127 153 RTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAV 232 (845)
Q Consensus 153 ~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 232 (845)
+|.+.|+..+++.++.++||.+..++-+..-+..+ +.+.+.-+ +-+..+..+. .-.....+
T Consensus 194 ~sFlDrMI~LVEgA~R~KTPNEIAL~iLL~~LTli---FL~~~~Tl----~p~a~y~~g~------------~~~i~~Li 254 (681)
T COG2216 194 ETFLDRMIALVEGAERQKTPNEIALTILLSGLTLI---FLLAVATL----YPFAIYSGGG------------AASVTVLV 254 (681)
T ss_pred ccHHHHHHHHhhchhccCChhHHHHHHHHHHHHHH---HHHHHHhh----hhHHHHcCCC------------CcCHHHHH
Confidence 99999999999999999999886655432222111 11111110 1011111010 01134467
Q ss_pred HHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCC
Q 003127 233 TIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKG 312 (845)
Q Consensus 233 ~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~ 312 (845)
+++++.+|-.+.-.++.-=..++.|+.+-|++.++.+++|.+|.+|++..|||||+|-|+-.-.+++..+...
T Consensus 255 ALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv~------- 327 (681)
T COG2216 255 ALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGVS------- 327 (681)
T ss_pred HHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCCC-------
Confidence 8889999998887777766778999999999999999999999999999999999999987776665443321
Q ss_pred CCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceE
Q 003127 313 TPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQM 392 (845)
Q Consensus 313 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~ 392 (845)
.+.+..+...++- +...|..+.+++.+++.+.+........ .....||+.+.|++
T Consensus 328 ------------~~~la~aa~lsSl------------~DeTpEGrSIV~LA~~~~~~~~~~~~~~-~~~fvpFtA~TRmS 382 (681)
T COG2216 328 ------------EEELADAAQLASL------------ADETPEGRSIVELAKKLGIELREDDLQS-HAEFVPFTAQTRMS 382 (681)
T ss_pred ------------HHHHHHHHHHhhh------------ccCCCCcccHHHHHHHhccCCCcccccc-cceeeecceecccc
Confidence 2223333333321 1346888999999999986644332221 34678999998888
Q ss_pred EEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCC
Q 003127 393 GVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIP 472 (845)
Q Consensus 393 sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~ 472 (845)
++-.. ++ +-+-|||.+.+....+. .+...| +.+++..++-++.|-..++++
T Consensus 383 Gvd~~--~~--~~irKGA~dai~~~v~~----~~g~~p------~~l~~~~~~vs~~GGTPL~V~--------------- 433 (681)
T COG2216 383 GVDLP--GG--REIRKGAVDAIRRYVRE----RGGHIP------EDLDAAVDEVSRLGGTPLVVV--------------- 433 (681)
T ss_pred cccCC--CC--ceeecccHHHHHHHHHh----cCCCCC------HHHHHHHHHHHhcCCCceEEE---------------
Confidence 87643 22 55679999999876542 333223 457788899999998888877
Q ss_pred CCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcC
Q 003127 473 TEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 552 (845)
Q Consensus 473 e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~ 552 (845)
.|.+++|.+.++|-++|+.+|-+.+||+.|||.+|+||||+.||..+|++.|++.
T Consensus 434 -~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------------ 488 (681)
T COG2216 434 -ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------------ 488 (681)
T ss_pred -ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------------
Confidence 4678999999999999999999999999999999999999999999999999986
Q ss_pred CeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 553 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 553 ~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
..++++||+|.+.++.-|.+ |+-|+|+|||.||+|+|.+||||+||. +|+..||+++++|=.|.|...+.+.++.
T Consensus 489 ---fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAAkEAaNMVDLDS~PTKlievV~I 563 (681)
T COG2216 489 ---FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAAKEAANMVDLDSNPTKLIEVVEI 563 (681)
T ss_pred ---hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCcchhhhhcchhhhhc-cccHHHHHhhcccccCCCccceehHhhh
Confidence 77999999999999999999 999999999999999999999999998 9999999999999999999999999999
Q ss_pred HHHHHH
Q 003127 633 GRSVYI 638 (845)
Q Consensus 633 gR~~~~ 638 (845)
|+...-
T Consensus 564 GKqlLi 569 (681)
T COG2216 564 GKQLLI 569 (681)
T ss_pred hhhhee
Confidence 987653
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=291.55 Aligned_cols=223 Identities=33% Similarity=0.540 Sum_probs=182.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecc
Q 003127 35 MSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINES 114 (845)
Q Consensus 35 ~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes 114 (845)
+.+++..++..+.+++.++..+++.+...+..++|+|||++++++++||+|||+|.+++||++||||++++...++||||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~~g~~~vd~s 83 (230)
T PF00122_consen 4 FLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLESGSAYVDES 83 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEESSEEEEECH
T ss_pred EEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCccceeccccccccc
Confidence 33444455566666666666666655444444999999999999999999999999999999999999999335899999
Q ss_pred cCCCCCCcccccC----CCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHH
Q 003127 115 SLTGESEPVNVNA----LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLF 190 (845)
Q Consensus 115 ~LtGEs~p~~k~~----~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 190 (845)
.+|||+.|+.|.+ .++++|+||.+.+|++.++|++||.+|..|++.+...+++.+++++++.++++..++.+++++
T Consensus 84 ~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (230)
T PF00122_consen 84 ALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILA 163 (230)
T ss_dssp HHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccc
Confidence 9999999999971 467899999999999999999999999999999999888888899999999999999888877
Q ss_pred HHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchh
Q 003127 191 FAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAA 270 (845)
Q Consensus 191 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~ 270 (845)
++++++++++.. +...++...+..++++++.+||++||+++++++..+.++|.++|+++|++++
T Consensus 164 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~~~a 227 (230)
T PF00122_consen 164 IAILVFIIWFFN----------------DSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKNLSA 227 (230)
T ss_dssp HHHHHHHHCHTG----------------STTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESSTTH
T ss_pred cchhhhccceec----------------ccccccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeCccc
Confidence 777666442211 0111455677888999999999999999999999999999999999999999
Q ss_pred hhh
Q 003127 271 CET 273 (845)
Q Consensus 271 ~e~ 273 (845)
+|+
T Consensus 228 ~E~ 230 (230)
T PF00122_consen 228 LEA 230 (230)
T ss_dssp HHH
T ss_pred ccC
Confidence 995
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.3e-22 Score=196.47 Aligned_cols=175 Identities=34% Similarity=0.556 Sum_probs=140.0
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 003127 667 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDG 746 (845)
Q Consensus 667 ~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (845)
|.|+++.|++|+|++.|.+|+++++.|++++++|+|||+++++++++++++..++.++++++++.+..++.....++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999998888777665544444221
Q ss_pred C---CccchhhhHHHHHHHHHHHhccccccccccccccc--CCchhHHHHHHHHHHHHHHHHH--HHHhhhcccccCCCh
Q 003127 747 P---DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK--GILKNYVFVAVLTCTVLFQIII--IELLGTFANTTPLNL 819 (845)
Q Consensus 747 ~---~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~--~~~~n~~~~~~~~~~~~~~~~~--v~~~~~~f~~~~l~~ 819 (845)
. .....++|++|.+++++|+++.+++|+. +.+.|+ +.++|++++.+++.++++++++ +|+++.+|++.|+++
T Consensus 81 ~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~-~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~~f~~~~l~~ 159 (182)
T PF00689_consen 81 ETNNDNLAQAQTMAFTALVLSQLFNAFNCRSR-RRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNRIFGTAPLPL 159 (182)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSS-SSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHHHST----TH
T ss_pred ccchhHHHHHHHHHHHHHHHHHHhhhcccccc-cccceecccccccchHHHHHHHHHHHHHHHhcchhhHhhhcccCCCH
Confidence 1 0123589999999999999999999963 345555 7779999999999998887654 566899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 003127 820 QQWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 820 ~~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
.+|+++++.+++.++++|++|++
T Consensus 160 ~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 160 WQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HHHHCHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1e-18 Score=187.78 Aligned_cols=290 Identities=14% Similarity=0.167 Sum_probs=212.4
Q ss_pred CcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCC------------------------
Q 003127 409 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNE------------------------ 464 (845)
Q Consensus 409 Ga~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~------------------------ 464 (845)
|-.+.+.+.|+.+|+ +....|++..++++..+...+-...|+ ++++|||+..-.
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkkV~DFY~RaclsG~-C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKKVKDFYLRACLSGH-CLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHHHHHHHHHHhhccc-chheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 666778999999996 556789999999999999888888885 999999975321
Q ss_pred ----------CC------------------CCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHH
Q 003127 465 ----------FS------------------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINT 516 (845)
Q Consensus 465 ----------~~------------------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t 516 (845)
++ +..+....+.+|+|++..+.+.+++....|+.|.++.||++..|-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 00 00022344678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCccCCceeeeC------------------------------------cccccCCHHH--------------
Q 003127 517 AKAIARECGILTDNGIAIEG------------------------------------PEFREKSDEE-------------- 546 (845)
Q Consensus 517 a~~ia~~lgi~~~~~~~i~g------------------------------------~~~~~~~~~~-------------- 546 (845)
.+-+|+++|+...++.-++- .+...+..|+
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsd 935 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSD 935 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccc
Confidence 99999999998765422211 0000000000
Q ss_pred ---------Hhhh-----------------cCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCH--HHHHhCCe
Q 003127 547 ---------LSKL-----------------IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDA--PALHEADI 598 (845)
Q Consensus 547 ---------~~~~-----------------~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~--~ml~~A~v 598 (845)
..++ ..-+..|..++|+.-.++++.+|++ |++++.+|...|-- -.+.+||+
T Consensus 936 i~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 936 IAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred hhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccce
Confidence 0000 0012368889999999999999998 99999999998843 34578999
Q ss_pred eEEeCCCCc-------------HHHH-----------------hccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 599 GLAMGIAGT-------------EVAK-----------------ESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQL 648 (845)
Q Consensus 599 gIamg~~~~-------------~~ak-----------------~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l 648 (845)
+||+..--. -... -++|+.......-.+..+|+.+|+....+|+++.|.+
T Consensus 1015 SialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiL 1094 (1354)
T KOG4383|consen 1015 SIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFIL 1094 (1354)
T ss_pred eEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 998742000 0011 1234444444455677888999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhh-hccCCCCccccc
Q 003127 649 TVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALA-LATEPPNGDLMK 701 (845)
Q Consensus 649 ~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~-l~~~~~~~~~~~ 701 (845)
+..+...+++++..++..|..++..+++|.+++...+..+. +...++.+.+|.
T Consensus 1095 q~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~ 1148 (1354)
T KOG4383|consen 1095 QAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIII 1148 (1354)
T ss_pred HHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEE
Confidence 99999999999999999999999999999998766444433 223444444444
|
|
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-21 Score=199.10 Aligned_cols=97 Identities=44% Similarity=0.717 Sum_probs=90.9
Q ss_pred ceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCe
Q 003127 475 GYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKI 554 (845)
Q Consensus 475 ~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~ 554 (845)
+..++|.+.+.|+++++++++|+.|+++|++++|+|||+..++.++++++|+.. .
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------~ 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------S 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------E
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------c
Confidence 688999999999999999999999999999999999999999999999999953 2
Q ss_pred eEEEEe--ChhcH--HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 003127 555 QVMARS--SPMDK--HTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597 (845)
Q Consensus 555 ~v~~~~--~p~~K--~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~ 597 (845)
.++++. +|++| .++++.++.+ ++.|+|+|||.||++|+++||
T Consensus 170 ~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 IVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred cccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 389999 99999 9999999966 569999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.3e-15 Score=126.68 Aligned_cols=125 Identities=23% Similarity=0.360 Sum_probs=108.2
Q ss_pred eEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 476 ~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
....+.++--.++-++++++|+.|++. ++++++|||...+....|+..|++.. +
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------r 72 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------R 72 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee-------------------------e
Confidence 456788888889999999999999999 99999999999999999999998754 3
Q ss_pred EEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe-CC-CCcHHHHhccCEEeccCChhHHHHH
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM-GI-AGTEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam-g~-~~~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
+++...|+.|.++++.|+++ ++.+.|+|||.||.+||+.||+||+. ++ +..+.+..+||+++.+ ...+.++
T Consensus 73 v~a~a~~e~K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 73 VFAGADPEMKAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred eecccCHHHHHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 88999999999999999987 89999999999999999999999985 32 3344577899999866 4444444
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.7e-14 Score=152.95 Aligned_cols=69 Identities=30% Similarity=0.358 Sum_probs=63.8
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.++++|||.||++||+.||+|+||+ ||.+.+|++||+|+.+++.+|+.++|++
T Consensus 195 vsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 195 VNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 579999999998877 57899999999999999999999999 9999999999999999999999998854
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.8e-14 Score=150.28 Aligned_cols=145 Identities=18% Similarity=0.234 Sum_probs=106.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-ee--eCcccc------------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AI--EGPEFR------------------ 540 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~~-~i--~g~~~~------------------ 540 (845)
..+.+.++++|++++++|++++++|||+...+..+.+++|+..+ ++. +. .+..+.
T Consensus 18 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~ 97 (272)
T PRK15126 18 HHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWD 97 (272)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhh
Confidence 36999999999999999999999999999999999999998632 110 10 000000
Q ss_pred ----------------cC-----------------------------------CHHH-------HhhhcC-CeeE-----
Q 003127 541 ----------------EK-----------------------------------SDEE-------LSKLIP-KIQV----- 556 (845)
Q Consensus 541 ----------------~~-----------------------------------~~~~-------~~~~~~-~~~v----- 556 (845)
.. ..++ +.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 177 (272)
T PRK15126 98 TRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSAT 177 (272)
T ss_pred cCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 00 0000 000000 0111
Q ss_pred -EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCE--EeccCChhHHHH
Q 003127 557 -MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTIVT 628 (845)
Q Consensus 557 -~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~--v~~~~~~~~i~~ 628 (845)
+....| .+|+..++.+.+++| +.++++|||.||++||+.||+||||| ||.+.+|++||+ ++.+++.+|+.+
T Consensus 178 ~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~v~~~n~edGva~ 256 (272)
T PRK15126 178 DCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLPVIGHCRNQAVSH 256 (272)
T ss_pred cEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCeecCCCcchHHHH
Confidence 111222 479999999998877 57899999999999999999999999 999999999996 778899999999
Q ss_pred HHH
Q 003127 629 VAK 631 (845)
Q Consensus 629 ~i~ 631 (845)
+|+
T Consensus 257 ~l~ 259 (272)
T PRK15126 257 YLT 259 (272)
T ss_pred HHH
Confidence 885
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7.7e-14 Score=147.50 Aligned_cols=146 Identities=21% Similarity=0.253 Sum_probs=106.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cce-ee--eCcccc------------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGI-AI--EGPEFR------------------ 540 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~~-~i--~g~~~~------------------ 540 (845)
.++.+.+.++|++++++|++++++|||++..+..+.+++|+..+ ++. +. +|..+.
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 35999999999999999999999999999999999999997632 211 11 010000
Q ss_pred -----------------cCC------------------------------------HHH-------HhhhcC-CeeE---
Q 003127 541 -----------------EKS------------------------------------DEE-------LSKLIP-KIQV--- 556 (845)
Q Consensus 541 -----------------~~~------------------------------------~~~-------~~~~~~-~~~v--- 556 (845)
... .++ +.+.+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 177 (266)
T PRK10976 98 NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFS 177 (266)
T ss_pred cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 000 000 000000 0111
Q ss_pred ---EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC--EEeccCChhHH
Q 003127 557 ---MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD--VIILDDNFSTI 626 (845)
Q Consensus 557 ---~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad--~v~~~~~~~~i 626 (845)
+....| .+|+..++.+.+++| +.|+++|||.||++||+.||+||||| ||.+.+|+.|| +++.+++.+|+
T Consensus 178 ~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGV 256 (266)
T PRK10976 178 TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAV 256 (266)
T ss_pred CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHH
Confidence 011122 469999999998877 57999999999999999999999999 99999999988 78889999999
Q ss_pred HHHHHH
Q 003127 627 VTVAKW 632 (845)
Q Consensus 627 ~~~i~~ 632 (845)
.++|++
T Consensus 257 a~~l~~ 262 (266)
T PRK10976 257 PHYLRK 262 (266)
T ss_pred HHHHHH
Confidence 998853
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.51 E-value=5e-14 Score=121.09 Aligned_cols=86 Identities=40% Similarity=0.617 Sum_probs=71.3
Q ss_pred hcCCceEEecCCCce-EEcCCchHHHHHHHHHHcC--CChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCc
Q 003127 334 NNTGGEVVIGEGNKT-EILGTPTETAILEFGLLLG--GDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGA 410 (845)
Q Consensus 334 ~~~~~~~~~~~~~~~-~~~~~p~e~al~~~~~~~~--~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa 410 (845)
+||++.+..+++... ...|+|+|.||++++.+.| .+....+..+++++.+||+|+||+|+++++ .++.+.+++|||
T Consensus 2 LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~~~~~~~pF~S~rK~msvv~~-~~~~~~~~~KGA 80 (91)
T PF13246_consen 2 LCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIKEIRSKYKIVAEIPFDSERKRMSVVVR-NDGKYILYVKGA 80 (91)
T ss_pred CccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHHHHHhhcceeEEEccCcccceeEEEEe-CCCEEEEEcCCC
Confidence 577776655543332 3799999999999999994 467788889999999999999999999998 334577799999
Q ss_pred HHHHHHhchh
Q 003127 411 SEIILAACDK 420 (845)
Q Consensus 411 ~~~il~~~~~ 420 (845)
||.|+++|++
T Consensus 81 ~e~il~~Ct~ 90 (91)
T PF13246_consen 81 PEVILDRCTH 90 (91)
T ss_pred hHHHHHhcCC
Confidence 9999999975
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.4e-14 Score=146.99 Aligned_cols=152 Identities=30% Similarity=0.405 Sum_probs=111.2
Q ss_pred EEeeecCC-CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeC-cccc------------
Q 003127 480 GIVGIKDP-MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEFR------------ 540 (845)
Q Consensus 480 G~~~~~d~-l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g-~~~~------------ 540 (845)
|++.-.+. +++.++++|+++++.|++++++|||++..+..+.+++++..+ ++ .+... +.+.
T Consensus 12 GTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i 91 (264)
T COG0561 12 GTLLDSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEEL 91 (264)
T ss_pred CCccCCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHH
Confidence 33443443 999999999999999999999999999999999999999742 11 00000 0000
Q ss_pred ---------------------------------------------------------cCCH---HHH----hhhcC-Cee
Q 003127 541 ---------------------------------------------------------EKSD---EEL----SKLIP-KIQ 555 (845)
Q Consensus 541 ---------------------------------------------------------~~~~---~~~----~~~~~-~~~ 555 (845)
.... ++. .+... ...
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 171 (264)
T COG0561 92 LELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGL 171 (264)
T ss_pred HHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccce
Confidence 0000 011 11111 111
Q ss_pred EEEEeC-------h--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh
Q 003127 556 VMARSS-------P--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF 623 (845)
Q Consensus 556 v~~~~~-------p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~ 623 (845)
.+.+.. | .+|+..++.+.+++| +.|+++||+.||++||+.||.||||| |+.+.+|+.||+++.+++.
T Consensus 172 ~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 172 TVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDE 250 (264)
T ss_pred EEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccc
Confidence 222222 2 679999999998777 35999999999999999999999999 8899999999999999999
Q ss_pred hHHHHHHHH
Q 003127 624 STIVTVAKW 632 (845)
Q Consensus 624 ~~i~~~i~~ 632 (845)
+|+.++|++
T Consensus 251 ~Gv~~~l~~ 259 (264)
T COG0561 251 DGVAEALEK 259 (264)
T ss_pred hHHHHHHHH
Confidence 999999865
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.1e-13 Score=155.44 Aligned_cols=69 Identities=32% Similarity=0.423 Sum_probs=63.3
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.|+++|||.||++||+.||+||||| ||.+.+|++||+|+.+++.+|+.++|++
T Consensus 506 vSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 506 TSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 468889999988877 57899999999999999999999999 9999999999999999999999998863
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.3e-13 Score=137.95 Aligned_cols=145 Identities=25% Similarity=0.312 Sum_probs=106.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee---CcccccCC---------------
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE---GPEFREKS--------------- 543 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~---g~~~~~~~--------------- 543 (845)
++.+.+.++|++++++|++++++|||+...+..+++.+|+..+ ++ .+.. +..+....
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRF 99 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhc
Confidence 4889999999999999999999999999999999999998632 21 1111 11110000
Q ss_pred --------------------------HHHHhhhc---C-CeeE-----EEEeCh--hcHHHHHHHHHhhcC---CEEEEE
Q 003127 544 --------------------------DEELSKLI---P-KIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVT 583 (845)
Q Consensus 544 --------------------------~~~~~~~~---~-~~~v-----~~~~~p--~~K~~~v~~l~~~~g---~~v~~~ 583 (845)
.++..+.+ . ...+ +....| .+|+..++.+.+++| +.++++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 100 PEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred cccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 00011100 0 0111 112222 459999999988766 568999
Q ss_pred cCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 584 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 584 GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
||+.||++|++.||+|+||+ |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 180 GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred CCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 99999999999999999999 9999999999999999999999998853
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.44 E-value=5.9e-13 Score=139.56 Aligned_cols=145 Identities=28% Similarity=0.360 Sum_probs=106.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cceee--------------------------
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAI-------------------------- 534 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~~~i-------------------------- 534 (845)
..++.+++.+++++++++|++++++|||++..+..+.+++++..+ ++.++
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 446889999999999999999999999999999999999998621 11000
Q ss_pred ---------eCccccc-C--------------------------------------CH-------HHHhhhcCCeeEEEE
Q 003127 535 ---------EGPEFRE-K--------------------------------------SD-------EELSKLIPKIQVMAR 559 (845)
Q Consensus 535 ---------~g~~~~~-~--------------------------------------~~-------~~~~~~~~~~~v~~~ 559 (845)
++..... . .. +++.+.......+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 0000000 0 00 011111111111111
Q ss_pred ---------eChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 560 ---------SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 560 ---------~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
....+|+..++.+.+.+| +.++++||+.||.+||+.||.|+||+ |+++.+|+.||+++.+++.+|++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~gv~ 251 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDDGVA 251 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCTHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCChHH
Confidence 223789999999998766 57899999999999999999999999 99999999999999988889998
Q ss_pred HHH
Q 003127 628 TVA 630 (845)
Q Consensus 628 ~~i 630 (845)
++|
T Consensus 252 ~~i 254 (254)
T PF08282_consen 252 KAI 254 (254)
T ss_dssp HHH
T ss_pred HhC
Confidence 875
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.42 E-value=8.3e-13 Score=134.76 Aligned_cols=144 Identities=24% Similarity=0.328 Sum_probs=105.3
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeC-ccc--ccCC--------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEG-PEF--REKS-------------- 543 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g-~~~--~~~~-------------- 543 (845)
.++.+++.++|++|+++|++++++|||++..+..+++.+++..+ ++ .+... ..+ ....
T Consensus 17 ~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (215)
T TIGR01487 17 RMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFP 96 (215)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhh
Confidence 35999999999999999999999999999999999999998642 11 11111 000 0000
Q ss_pred ---------------------HHHHhhhcC--CeeE-----EEE--eChhcHHHHHHHHHhhcC---CEEEEEcCCccCH
Q 003127 544 ---------------------DEELSKLIP--KIQV-----MAR--SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDA 590 (845)
Q Consensus 544 ---------------------~~~~~~~~~--~~~v-----~~~--~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~ 590 (845)
.+.+.+.+. ...+ +.. ....+|+..++.+.+++| +.++++||+.||+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~ 176 (215)
T TIGR01487 97 RDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDI 176 (215)
T ss_pred hhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 000000000 0111 111 223689999999988766 3589999999999
Q ss_pred HHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 591 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 591 ~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
+|++.||+|+||+ |+.+.+|+.||+++.+++.+|+.++|
T Consensus 177 ~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 177 DLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 9999999999999 99999999999999989999988753
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.8e-12 Score=133.47 Aligned_cols=144 Identities=24% Similarity=0.310 Sum_probs=104.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc---cc-c-cCCH------------
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP---EF-R-EKSD------------ 544 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~---~~-~-~~~~------------ 544 (845)
.+.+.+.++|++++++|++++++|||++..+..+.+++|+..+ ++ .+.... .. . ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 5889999999999999999999999999999999999996432 11 111111 00 0 0000
Q ss_pred ------------------------HHHhhhc---C-CeeE-----EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCC
Q 003127 545 ------------------------EELSKLI---P-KIQV-----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 586 (845)
Q Consensus 545 ------------------------~~~~~~~---~-~~~v-----~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg 586 (845)
+...... . ...+ +....| .+|...++.+.+++| +.++++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0000000 0 0001 111222 589999999988766 579999999
Q ss_pred ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH----HHHHHH
Q 003127 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST----IVTVAK 631 (845)
Q Consensus 587 ~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~----i~~~i~ 631 (845)
.||++|++.||+|+||+ |+.+.+|+.||+|+.+++.+| +.+.|+
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999 899999999999999999999 776664
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=2.1e-12 Score=137.12 Aligned_cols=69 Identities=28% Similarity=0.365 Sum_probs=62.0
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+|+||| |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 198 ~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~~ 269 (272)
T PRK10530 198 NSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIYS 269 (272)
T ss_pred CChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHHH
Confidence 468888888887766 57999999999999999999999999 8899999999999999999999998853
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.27 E-value=2.1e-11 Score=128.13 Aligned_cols=144 Identities=30% Similarity=0.417 Sum_probs=104.4
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee--Ccccc------------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE--GPEFR------------------ 540 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~--g~~~~------------------ 540 (845)
.++.+++.++|++++++|++++++|||++..+..+.+++|+..+ ++ .+.. ++.+.
T Consensus 15 ~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~ 94 (256)
T TIGR00099 15 HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKK 94 (256)
T ss_pred CccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999999987632 11 0000 00000
Q ss_pred ----------------cC-------------------------------------CH---HHHhhhcC------CeeE--
Q 003127 541 ----------------EK-------------------------------------SD---EELSKLIP------KIQV-- 556 (845)
Q Consensus 541 ----------------~~-------------------------------------~~---~~~~~~~~------~~~v-- 556 (845)
.. .. +++.+.+. ...+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 00 00 00011111 1111
Q ss_pred ----EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 557 ----MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 557 ----~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
+....| .+|+..++.+.+.++ +.++++||+.||++|++.||+|+||+ |+.+.+|+.||+++.+++.+|+.
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~ 253 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVA 253 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchh
Confidence 111222 579999999998765 57999999999999999999999999 89999999999999999999988
Q ss_pred HHH
Q 003127 628 TVA 630 (845)
Q Consensus 628 ~~i 630 (845)
++|
T Consensus 254 ~~l 256 (256)
T TIGR00099 254 LAL 256 (256)
T ss_pred hhC
Confidence 753
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.26 E-value=5.3e-11 Score=125.94 Aligned_cols=146 Identities=16% Similarity=0.111 Sum_probs=100.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCc-eeeeCcc--------cc--cCCHHHH---
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-----DNG-IAIEGPE--------FR--EKSDEEL--- 547 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~-----~~~-~~i~g~~--------~~--~~~~~~~--- 547 (845)
.+.+.++++|++|+++|++++++|||+...+..+++++|+.. .|+ .+..... +. .++.+..
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 467889999999999999999999999999999999999852 122 2221100 00 0000000
Q ss_pred ------------------------------------hhh----------------------cC--CeeE-----EEEeCh
Q 003127 548 ------------------------------------SKL----------------------IP--KIQV-----MARSSP 562 (845)
Q Consensus 548 ------------------------------------~~~----------------------~~--~~~v-----~~~~~p 562 (845)
.+. +. ...+ +....|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 000 00 0001 111222
Q ss_pred --hcHHHHHHHHHhhcC------CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHH-----HHhccCEEeccCChhHHHHH
Q 003127 563 --MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 563 --~~K~~~v~~l~~~~g------~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~-----ak~~ad~v~~~~~~~~i~~~ 629 (845)
.+|+..++.+.+++| +.|+++|||.||++||+.||+|||||++..+. .+..||+++...+.+|+.++
T Consensus 184 ~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~ 263 (271)
T PRK03669 184 ASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREG 263 (271)
T ss_pred CCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHH
Confidence 578888888887644 57999999999999999999999999433232 45589999999999999998
Q ss_pred HHH
Q 003127 630 AKW 632 (845)
Q Consensus 630 i~~ 632 (845)
+++
T Consensus 264 l~~ 266 (271)
T PRK03669 264 LDH 266 (271)
T ss_pred HHH
Confidence 864
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=8.1e-11 Score=125.78 Aligned_cols=128 Identities=20% Similarity=0.296 Sum_probs=101.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-----eC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----SS 561 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-----~~ 561 (845)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+... .. ..+... +..+..+ +.
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~----~a-n~lei~----------dg~ltg~v~g~iv~ 245 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAA----VA-NELEIM----------DGKLTGNVLGDIVD 245 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeE----EE-eEEEEE----------CCEEEeEecCccCC
Confidence 5899999999999999999999999998888999999998531 11 000000 0001111 23
Q ss_pred hhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 562 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
...|.+.++.+.+++| +.++++|||.||++|++.||+|||| |+.+.+++.||+++..++++++..++.
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 4679999999987766 6799999999999999999999999 789999999999999999999887664
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.3e-10 Score=121.85 Aligned_cols=144 Identities=17% Similarity=0.128 Sum_probs=100.8
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc--c------cc--cCCHHH------
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP--E------FR--EKSDEE------ 546 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~--~------~~--~~~~~~------ 546 (845)
..+.+.++|++|+++|++++++|||++..+..+.+++|+..+ ++ .+.... . +. .++.+.
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 455799999999999999999999999999999999997532 22 222211 0 00 011000
Q ss_pred -H--------------------------------h--------------------hhcC--CeeE-----EEEeC--hhc
Q 003127 547 -L--------------------------------S--------------------KLIP--KIQV-----MARSS--PMD 564 (845)
Q Consensus 547 -~--------------------------------~--------------------~~~~--~~~v-----~~~~~--p~~ 564 (845)
+ . +.+. ...+ +.... ..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 0 0 0000 0000 01111 257
Q ss_pred HHHHHHHHHhhcC-----CEEEEEcCCccCHHHHHhCCeeEEeCCCCc---HHHHhc--c-CEEeccCChhHHHHHHHH
Q 003127 565 KHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--A-DVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 565 K~~~v~~l~~~~g-----~~v~~~GDg~ND~~ml~~A~vgIamg~~~~---~~ak~~--a-d~v~~~~~~~~i~~~i~~ 632 (845)
|+..++.+.++++ +.++++||+.||.+|++.||+||||+ |+. +.+|+. | ++++.+++.+|+.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 8888888887754 46999999999999999999999999 777 468886 4 599999999999998864
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.4e-10 Score=110.22 Aligned_cols=104 Identities=18% Similarity=0.212 Sum_probs=84.3
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573 (845)
Q Consensus 494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 573 (845)
.+|+.|+++|+++.++|+.+...+....+.+|+.. .|.... .|...++.+.
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~---------------------------~f~~~k--pkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR---------------------------FHEGIK--KKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE---------------------------EEecCC--CCHHHHHHHH
Confidence 48999999999999999999999999999999963 222222 3334444444
Q ss_pred hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
++++ +.++++||+.||++|++.||+++||+ |+.+.+|+.|++++.+++.++.+
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~v 147 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGAV 147 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCHH
Confidence 4433 67999999999999999999999999 89999999999999777666543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.09 E-value=6.9e-10 Score=106.31 Aligned_cols=107 Identities=19% Similarity=0.249 Sum_probs=87.8
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHh
Q 003127 495 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 574 (845)
Q Consensus 495 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 574 (845)
+|++|+++|+++.++||++...+..+.+.+|+.. .+... ..|...++.+.+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------~~~~~--~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------LYQGQ--SNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE---------------------------EEecc--cchHHHHHHHHH
Confidence 8999999999999999999999999999999863 22211 346666666655
Q ss_pred hcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH-HHHHHH
Q 003127 575 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST-IVTVAK 631 (845)
Q Consensus 575 ~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~-i~~~i~ 631 (845)
+++ +.++++||+.||++|++.|+++++|. ++.+..+..||+++.++.-++ ++++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 444 67999999999999999999999999 888899999999998776555 666553
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.07 E-value=8.8e-10 Score=110.32 Aligned_cols=128 Identities=16% Similarity=0.090 Sum_probs=97.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeC-cccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEG-PEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--~~i~g-~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
++.|++.+.|+.+++.| +++++||-....+..+++++|+..--. ..+.+ ..+ ... . ...++
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~------------tG~-~--~~~~~ 131 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRV------------VGY-Q--LRQKD 131 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCee------------ECe-e--ecCcc
Confidence 68999999999999985 999999999999999999999964211 11111 000 000 0 13567
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHH
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 633 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~g 633 (845)
.|...++.+++. +..+.++|||.||++|++.||+||++. +.+..+++||-.-.-.+.+.+..++.++
T Consensus 132 ~K~~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 132 PKRQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred hHHHHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 899999999876 778889999999999999999999995 7777777777555445677777777554
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.1e-09 Score=115.96 Aligned_cols=147 Identities=19% Similarity=0.152 Sum_probs=102.1
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCc----------------cccc--
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGP----------------EFRE-- 541 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~----------------~~~~-- 541 (845)
++.+.+++.++|++|+++|++++++|||+...+..+.+++|+..+ ++ .+.... .+..
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELG 98 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcC
Confidence 346788899999999999999999999999999999999998642 11 122110 0000
Q ss_pred CCHHH-------H------------------------------hhh----cC----------------------CeeE--
Q 003127 542 KSDEE-------L------------------------------SKL----IP----------------------KIQV-- 556 (845)
Q Consensus 542 ~~~~~-------~------------------------------~~~----~~----------------------~~~v-- 556 (845)
++.+. + ... .. ...+
T Consensus 99 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (273)
T PRK00192 99 PPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTR 178 (273)
T ss_pred CCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEE
Confidence 00000 0 000 00 0000
Q ss_pred ---EEEeC-hhcHHHHHHHHHhhcC----CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHH----hcc-CEEe--ccC
Q 003127 557 ---MARSS-PMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK----ESA-DVII--LDD 621 (845)
Q Consensus 557 ---~~~~~-p~~K~~~v~~l~~~~g----~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak----~~a-d~v~--~~~ 621 (845)
+.... +.+|+..++.+.+++| +.++++||+.||++|++.||+|+||+ ||.+.+| ++| +.+. .++
T Consensus 179 ~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~ 257 (273)
T PRK00192 179 GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAP 257 (273)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCC
Confidence 00111 1278888888876543 78999999999999999999999999 9999988 666 6777 677
Q ss_pred ChhHHHHHHHH
Q 003127 622 NFSTIVTVAKW 632 (845)
Q Consensus 622 ~~~~i~~~i~~ 632 (845)
+.+|+.+++++
T Consensus 258 ~~~Gv~~~l~~ 268 (273)
T PRK00192 258 GPEGWAEAINK 268 (273)
T ss_pred CcHHHHHHHHH
Confidence 78999988853
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-09 Score=98.80 Aligned_cols=102 Identities=23% Similarity=0.327 Sum_probs=89.7
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573 (845)
Q Consensus 494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 573 (845)
-.|+.|++.|+++.++|||+...++.-++++|+.. +|-. ..+|....+.|.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~---------------------------~~qG--~~dK~~a~~~L~ 92 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH---------------------------LYQG--ISDKLAAFEELL 92 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce---------------------------eeec--hHhHHHHHHHHH
Confidence 38999999999999999999999999999999974 3332 368988888888
Q ss_pred hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH
Q 003127 574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 625 (845)
Q Consensus 574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~ 625 (845)
++++ +.++++||..||.|+|++.|+++|+. ++.+..++.||+|+..+.-+|
T Consensus 93 ~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~G 146 (170)
T COG1778 93 KKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEG 146 (170)
T ss_pred HHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcch
Confidence 7755 68999999999999999999999999 899999999999998776555
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.6e-09 Score=108.86 Aligned_cols=123 Identities=26% Similarity=0.283 Sum_probs=92.9
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+++|++.+.++.++++|.+++++||-...-+.++++.+|++..-...+..++ . .+....+--.+..+.|
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~d-G---------~ltG~v~g~~~~~~~K 145 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDD-G---------KLTGRVVGPICDGEGK 145 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeC-C---------EEeceeeeeecCcchH
Confidence 57999999999999999999999999999999999999999864221111110 0 0000012223455789
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEecc
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~ 620 (845)
...++.+.+.+| +.+.++|||.||.|||+.||.++|. |+.+..++.|+.....
T Consensus 146 ~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~--n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 146 AKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAV--NPKPKLRALADVRIWP 201 (212)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEe--CcCHHHHHHHHHhcCh
Confidence 999988887656 3588889999999999999999998 4677777777766544
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.97 E-value=4.1e-09 Score=109.23 Aligned_cols=69 Identities=19% Similarity=0.214 Sum_probs=62.0
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC----EEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD----VIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad----~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||.+|++.+|+||+|+ |+.+.+|+.|| +++.+++.+|+.++|++
T Consensus 158 ~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 479999999988766 36888999999999999999999999 89999999999 88888889999998864
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.96 E-value=6.2e-09 Score=108.72 Aligned_cols=147 Identities=15% Similarity=0.155 Sum_probs=104.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCcee-eeCccccc-------C--------------
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA-IEGPEFRE-------K-------------- 542 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~-i~g~~~~~-------~-------------- 542 (845)
.++..|.+.+++++++++|+.++++|||+..+++.+.+++++..+.-.+ -+|..+.. .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 4567899999999999999999999999999999999999986552111 01111100 0
Q ss_pred ----------------------------CH-------HHHhhhcC----CeeE-EE-----EeCh--hcHHHHHHHHHhh
Q 003127 543 ----------------------------SD-------EELSKLIP----KIQV-MA-----RSSP--MDKHTLVKHLRTT 575 (845)
Q Consensus 543 ----------------------------~~-------~~~~~~~~----~~~v-~~-----~~~p--~~K~~~v~~l~~~ 575 (845)
.. +++.+.+. +..+ .+ ...| ..|...++.+++.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 00 00011110 1111 11 1222 6899999999887
Q ss_pred cC---CEEEEEcCCccCHHHHHh-CCeeEEeCCCCcHHHHhccC-------EEeccCChhHHHHHHHH
Q 003127 576 LG---EVVAVTGDGTNDAPALHE-ADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW 632 (845)
Q Consensus 576 ~g---~~v~~~GDg~ND~~ml~~-A~vgIamg~~~~~~ak~~ad-------~v~~~~~~~~i~~~i~~ 632 (845)
+| +.++++||+.||++|++. ++.|+||+ |+.+.+|+.++ ++.....-+|+.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 66 678999999999999998 67999999 89998887654 77777788999988864
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.3e-09 Score=102.79 Aligned_cols=103 Identities=19% Similarity=0.219 Sum_probs=85.2
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573 (845)
Q Consensus 494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 573 (845)
.+++.|+++|+++.++||++...+..+++++|+.. +|. ..+.|...++.+.
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~---------------------------~f~--g~~~k~~~l~~~~ 105 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH---------------------------LYQ--GQSNKLIAFSDLL 105 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce---------------------------eec--CCCcHHHHHHHHH
Confidence 68999999999999999999999999999999863 222 2345777777776
Q ss_pred hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHH
Q 003127 574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTI 626 (845)
Q Consensus 574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i 626 (845)
+++| +.++++||+.||++|++.||++++++ ++.+..+..||+++..++-++.
T Consensus 106 ~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~ 160 (183)
T PRK09484 106 EKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGA 160 (183)
T ss_pred HHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCH
Confidence 6555 57999999999999999999999998 7888889999999975544443
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.90 E-value=7.1e-09 Score=106.18 Aligned_cols=128 Identities=21% Similarity=0.297 Sum_probs=95.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--eCcccccCCHHHHhhhcCCeeEEEE-eChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFREKSDEELSKLIPKIQVMAR-SSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i--~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~ 563 (845)
++.+++.+.++.|+++|++++++||.....+..+.+.+|+..-....+ .+..+. ..+... ..+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~ 151 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLT-------------GLVEGPIVDAS 151 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEE-------------EEecCcccCCc
Confidence 589999999999999999999999999999999999999864211000 000000 000001 1223
Q ss_pred cHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHH
Q 003127 564 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 564 ~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
.|..+++.+.++.+ +.+.++||+.||++|.+.||++++++ +.+.++++||+++.++++..+..+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 47777777766644 46888999999999999999999985 678889999999999887776653
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.84 E-value=2.2e-08 Score=111.31 Aligned_cols=145 Identities=19% Similarity=0.168 Sum_probs=99.2
Q ss_pred CCChhHHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceee-eCccccc-----------------------
Q 003127 487 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI-EGPEFRE----------------------- 541 (845)
Q Consensus 487 ~l~~~~~~~I-~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i-~g~~~~~----------------------- 541 (845)
++.+...+++ +++++.|+.++++|||++.....+.++.++..+...+. +|.++..
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 4555556666 89999999999999999999999999999877642111 1111100
Q ss_pred ------C--------------------CH-------HHHhhhcC----CeeE------EEEeCh--hcHHHHHHHHHhhc
Q 003127 542 ------K--------------------SD-------EELSKLIP----KIQV------MARSSP--MDKHTLVKHLRTTL 576 (845)
Q Consensus 542 ------~--------------------~~-------~~~~~~~~----~~~v------~~~~~p--~~K~~~v~~l~~~~ 576 (845)
. .. +.+.+.+. ++.+ +....| .+|+..++.+++++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 0 00 00111110 1111 112233 57999999998886
Q ss_pred ---C---CEEEEEcCCccCHHHHHhCC-eeEEeCCCCcHHHHhcc--------CEEe-ccCChhHHHHHHHH
Q 003127 577 ---G---EVVAVTGDGTNDAPALHEAD-IGLAMGIAGTEVAKESA--------DVII-LDDNFSTIVTVAKW 632 (845)
Q Consensus 577 ---g---~~v~~~GDg~ND~~ml~~A~-vgIamg~~~~~~ak~~a--------d~v~-~~~~~~~i~~~i~~ 632 (845)
| +.++++||+.||++||+.|| .||||| |+.+.+|+.+ +++. .+++.+|+.++|++
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 4 57899999999999999999 799999 8999888743 4443 35678899988864
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.4e-08 Score=91.37 Aligned_cols=105 Identities=23% Similarity=0.373 Sum_probs=78.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eee--eCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAI--EGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~----~~i--~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
++.|+++|.+++||+.|.+++++||--..-+..++.++||+..+. +.. +|+-.... . --.-+
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd----------~--~~pts 155 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFD----------T--NEPTS 155 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccc----------c--CCccc
Confidence 578999999999999999999999999999999999999986431 000 11100000 0 00012
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
....|++.++.+++.++ +.++|+|||.||++|+..|+.=|+.|
T Consensus 156 dsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 156 DSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred cCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 33579999999998655 68999999999999999988777655
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=98.59 E-value=1.2e-05 Score=90.72 Aligned_cols=97 Identities=20% Similarity=0.263 Sum_probs=74.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
|++|++.+.+++++++|++++++|+.+...++.+++.+|+.+ .++.+++. .++.|+.|.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd---~Vigsd~~------------------~~~kg~~K~ 130 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD---GVFASDGT------------------TNLKGAAKA 130 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC---EEEeCCCc------------------cccCCchHH
Confidence 578999999999999999999999999999999999999832 33333221 134566676
Q ss_pred HHHHHHHhhcCC-EEEEEcCCccCHHHHHhCCeeEEeCCCCcH
Q 003127 567 TLVKHLRTTLGE-VVAVTGDGTNDAPALHEADIGLAMGIAGTE 608 (845)
Q Consensus 567 ~~v~~l~~~~g~-~v~~~GDg~ND~~ml~~A~vgIamg~~~~~ 608 (845)
..++.. +++ .+.++||+.||++|++.||-.++++ .+..
T Consensus 131 ~~l~~~---l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 131 AALVEA---FGERGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred HHHHHH---hCccCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 554432 232 3677899999999999999999997 4443
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=4e-07 Score=92.16 Aligned_cols=123 Identities=22% Similarity=0.299 Sum_probs=89.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhcCCeeEEE--EeCh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMA--RSSP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~v~~--~~~p 562 (845)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...- .....++.. +.. ...|
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------i~~~~~~~p 130 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDGM----------------ITGYDLRQP 130 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCCe----------------EECcccccc
Confidence 4689999999999999 999999999999999999999986311 011111000 000 1246
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCE-EeccCChhHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV-IILDDNFSTIVTVA 630 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~-v~~~~~~~~i~~~i 630 (845)
..|...++.++.. ++.++++|||.||++|.+.||+|++.+ ...+.....+++ ++. ++..+.+.+
T Consensus 131 ~~k~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~l 195 (205)
T PRK13582 131 DGKRQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAAI 195 (205)
T ss_pred chHHHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHHH
Confidence 7888888988877 788999999999999999999999886 443334445565 443 366665544
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.56 E-value=2.8e-07 Score=94.18 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=39.9
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
.+...+++.++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45667789999999999999999999999999999999999753
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.7e-07 Score=92.01 Aligned_cols=118 Identities=22% Similarity=0.235 Sum_probs=82.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.....+..+++.+|+..--...+..++-... -+. .+....+..|.
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~--------~p~--~~~~~~~~~k~ 149 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI--------QPD--GIVRVTFDNKG 149 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE--------ecc--eeeEEccccHH
Confidence 58999999999999999999999999999999999999975311111100000000 001 11223456787
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 615 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad 615 (845)
..++.+.+.++ +.++++||+.||++|++.||++++++ .+....+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 78777766544 46899999999999999999999997 43444444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.55 E-value=5.8e-07 Score=92.14 Aligned_cols=40 Identities=15% Similarity=0.171 Sum_probs=37.0
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 527 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~ 527 (845)
..+.++++|++++++|++++++|||+...+..+.+++|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4455999999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.5e-07 Score=92.74 Aligned_cols=138 Identities=12% Similarity=0.228 Sum_probs=91.6
Q ss_pred CCChhHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceee---eCcc-cccCC----------------
Q 003127 487 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGIL--TDNGIAI---EGPE-FREKS---------------- 543 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~lgi~--~~~~~~i---~g~~-~~~~~---------------- 543 (845)
.+.++++++|++|++ .|++++++|||+...+..+.+.+++. ..++..+ .+.. ...+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 677899999999998 79999999999999999988877642 2222111 0000 00000
Q ss_pred ------------------------HHHHhh-------hcCCee-----EEEEeCh--hcHHHHHHHHHhhcC---CEEEE
Q 003127 544 ------------------------DEELSK-------LIPKIQ-----VMARSSP--MDKHTLVKHLRTTLG---EVVAV 582 (845)
Q Consensus 544 ------------------------~~~~~~-------~~~~~~-----v~~~~~p--~~K~~~v~~l~~~~g---~~v~~ 582 (845)
.+.+.+ ...... -+....| .+|+..++.+.+++| +.+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 010000 011111 1112223 689999999888766 57888
Q ss_pred EcCCccCHHHHHhC----CeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 583 TGDGTNDAPALHEA----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 583 ~GDg~ND~~ml~~A----~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
+||+.||.+|++.+ ++||+|| ++. ..|++.+.+ .+.+...+.
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~~--~~~v~~~L~ 241 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLAG--VPDVWSWLE 241 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCCC--HHHHHHHHH
Confidence 99999999999999 9999999 664 347887754 667766653
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.8e-06 Score=87.53 Aligned_cols=44 Identities=7% Similarity=0.043 Sum_probs=40.1
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
++...+.++++|++|+++|+.++++|||.......+.+++|+..
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 34577889999999999999999999999999999999999864
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.35 E-value=4.8e-06 Score=85.51 Aligned_cols=128 Identities=24% Similarity=0.346 Sum_probs=84.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE------e
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~------~ 560 (845)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+...+ ++.. .+... . +..+... .
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~--~~~~-~~~~~-~--------~g~~~g~~~~~~~~ 151 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN--IFAN-QILFG-D--------SGEYAGFDENEPTS 151 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh--EEEe-EEEEc-C--------CCcEECccCCCccc
Confidence 47899999999999999999999999999999999999996311 1100 00000 0 0000000 1
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhC--CeeEEeCCCC-cHHHHhccCEEeccCChhHHHH
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGLAMGIAG-TEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A--~vgIamg~~~-~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
....|...++.+.++++ +.++++||+.||+.|.+.+ +++++.|... .+.....+|+++.+ +..+.+
T Consensus 152 ~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred CCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 12457788888776645 5788999999999998884 5555545211 23345568998854 555544
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.1e-06 Score=89.37 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=43.7
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcC----CccCHHHHHhC-CeeEEeCCCCcHHHHhccCEE
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEA-DIGLAMGIAGTEVAKESADVI 617 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GD----g~ND~~ml~~A-~vgIamg~~~~~~ak~~ad~v 617 (845)
.+|+..++.|.++ .+.|+++|| |.||++||+.| -.|++++ |+.|.+|..|.++
T Consensus 187 vsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~ 244 (247)
T PTZ00174 187 WDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELF 244 (247)
T ss_pred CcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHh
Confidence 6799999999988 678999999 99999999965 4556667 8888888877654
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.8e-06 Score=85.87 Aligned_cols=127 Identities=24% Similarity=0.369 Sum_probs=95.3
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
..++-|+++++++.|+++|++..++|+++...+..+.+..|+...-..++.++... ..+.+|..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~~~~----------------~~KP~P~~ 150 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGDDVP----------------PPKPDPEP 150 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCCCCC----------------CCCcCHHH
Confidence 44688999999999999999999999999999999999999986543333322211 11234555
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC---eeEEeCCC-CcHHHHhccCEEeccCChhHHHHHH
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMGIA-GTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~---vgIamg~~-~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
...+++.+... .+.++||||+.+|+.|-++|| +|+..|.+ ..+.....+|+++.+ +..+...+
T Consensus 151 l~~~~~~~~~~-~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 151 LLLLLEKLGLD-PEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred HHHHHHHhCCC-hhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 66666666655 468999999999999999999 77777743 334566779999965 66666544
|
|
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=3e-06 Score=96.89 Aligned_cols=48 Identities=8% Similarity=0.100 Sum_probs=40.8
Q ss_pred EEeeecC-CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003127 480 GIVGIKD-PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 527 (845)
Q Consensus 480 G~~~~~d-~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~ 527 (845)
|++.-.+ ...+.+.++|++++++|++++++|||+...+..+++++|+.
T Consensus 425 GTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 425 GTLLNPLTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred CCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 5444433 35678899999999999999999999999999999999974
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.29 E-value=6.9e-06 Score=83.62 Aligned_cols=133 Identities=16% Similarity=0.143 Sum_probs=86.3
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC---CceeeeCcccccCCHHHHhhhcCCeeEE---EE
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKSDEELSKLIPKIQVM---AR 559 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~---~~~~i~g~~~~~~~~~~~~~~~~~~~v~---~~ 559 (845)
.+++|++.+.++.|++.|+++.++||.....+..+.+.++.... +....++..+.... +.-..+ .+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------p~~~~~~~~~~ 140 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------PHPCDGTCQNQ 140 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------CCCCccccccC
Confidence 36899999999999999999999999999999999988754321 11222222211000 000000 01
Q ss_pred eChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHH--hccCEEeccCChhHHHHHHH
Q 003127 560 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK--ESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 560 ~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak--~~ad~v~~~~~~~~i~~~i~ 631 (845)
+ ...|..+++.++.. ++.++++|||.||++|.+.||+.+|=+ .-.+..+ ..+.+.. +++..+...++
T Consensus 141 c-g~~K~~~l~~~~~~-~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~~~l~ 209 (214)
T TIGR03333 141 C-GCCKPSLIRKLSEP-NDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVRKELE 209 (214)
T ss_pred C-CCCHHHHHHHHhhc-CCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHHHHHH
Confidence 1 24699999998876 677899999999999999999987644 2112111 1122222 45777766653
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.24 E-value=4.5e-06 Score=86.61 Aligned_cols=69 Identities=22% Similarity=0.246 Sum_probs=50.1
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHH-----HHhcc---C-EEeccCChhHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-----AKESA---D-VIILDDNFSTIVTVA 630 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~-----ak~~a---d-~v~~~~~~~~i~~~i 630 (845)
.+|...++.++++++ +.|+++||+.||.+||..++.||.+| |+.++ ..+.. . +....+.-.||.+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl 242 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGL 242 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHH
Confidence 689999999999876 46777899999999999999999999 77776 22222 2 556666777888877
Q ss_pred HH
Q 003127 631 KW 632 (845)
Q Consensus 631 ~~ 632 (845)
++
T Consensus 243 ~~ 244 (247)
T PF05116_consen 243 QH 244 (247)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.21 E-value=8.7e-06 Score=83.71 Aligned_cols=128 Identities=23% Similarity=0.332 Sum_probs=87.6
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++.|++.+.++.|+++|++++++||..........+.+|+...-..++.+++.. .....|+--
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~~~~~ 155 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGDSLP----------------NKKPDPAPL 155 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCCCCC----------------CCCcChHHH
Confidence 4578999999999999999999999999999999999999864322222222110 001122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC--CC-CcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG--IA-GTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg--~~-~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
..+++.++.. .+.++++||+.||+.+.+.||+ +|.+. .+ ..+.....+++++. ++..+...+.+
T Consensus 156 ~~~~~~~~~~-~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~~~l~~ 223 (226)
T PRK13222 156 LLACEKLGLD-PEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELLPLLGL 223 (226)
T ss_pred HHHHHHcCCC-hhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHHHHHHH
Confidence 3444444433 4678999999999999999999 55543 11 22334557888884 48888777654
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.19 E-value=5.8e-06 Score=83.43 Aligned_cols=109 Identities=17% Similarity=0.188 Sum_probs=77.2
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEE-EEeChh
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM-ARSSPM 563 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~-~~~~p~ 563 (845)
..++.+++.+.++.++++|++++++||.....+..+++.+|+..- +.. ++....+..+. .+ +. ..+..+
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~----~~~-~l~~~~~g~~~---g~--~~~~~~~g~ 154 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNA----IGT-RLEESEDGIYT---GN--IDGNNCKGE 154 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcce----Eec-ceEEcCCCEEe---CC--ccCCCCCCh
Confidence 346899999999999999999999999999999999999998631 111 00000000000 00 00 113456
Q ss_pred cHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 564 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 564 ~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.|...++.+.++.+ +.+.++||+.+|++|++.||.++++.
T Consensus 155 ~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 155 GKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred HHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 78887877765434 36888999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.13 E-value=5.9e-06 Score=77.07 Aligned_cols=113 Identities=20% Similarity=0.145 Sum_probs=73.4
Q ss_pred ecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
-..++.+++.+.+++|+++|++++++||+....+....+.+|+......++......................+.+..++
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPNPD 100 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcccccccccccccccCCCCHH
Confidence 34588999999999999999999999999999999999999985332223322111100000000000111122234445
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~ 597 (845)
.+..+.+.+... .+.++++||+.+|++|.+.++
T Consensus 101 ~~~~~~~~~~~~-~~~~~~igD~~~d~~~~~~~g 133 (139)
T cd01427 101 KLLAALKLLGVD-PEEVLMVGDSLNDIEMAKAAG 133 (139)
T ss_pred HHHHHHHHcCCC-hhhEEEeCCCHHHHHHHHHcC
Confidence 555666665544 467899999999999999843
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.4e-05 Score=81.73 Aligned_cols=105 Identities=22% Similarity=0.246 Sum_probs=73.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhcCCeeE--EEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQV--MARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~----~~~i~g~~~~~~~~~~~~~~~~~~~v--~~~~ 560 (845)
+++|++.+.++.|+++|+++.++||-....+..+.+.+ +.... ....+|+.+... .+.-.. +...
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~--------kp~p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT--------WPHPCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe--------ccCCcccccccc
Confidence 68999999999999999999999999999999999988 64311 011122211100 000000 0000
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
....|..+++.++.. ++.+.++|||.||++|.+.||+.++
T Consensus 145 ~~~~K~~~l~~~~~~-~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 145 CGCCKPSLIRKLSDT-NDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CCCchHHHHHHhccC-CCCEEEEeCCHHHHHHHHHCCccee
Confidence 013488899888776 6678999999999999999999775
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.1e-05 Score=81.43 Aligned_cols=116 Identities=23% Similarity=0.415 Sum_probs=78.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC--ccCCceee-e-Cccc-cc--C-----------------
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI--LTDNGIAI-E-GPEF-RE--K----------------- 542 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi--~~~~~~~i-~-g~~~-~~--~----------------- 542 (845)
++.+.+.+++++|++.|++++++|||....+..+.++++. ...++..+ . +... .. .
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 5889999999999999999999999999999999988542 22222111 1 1000 00 0
Q ss_pred -----------------------C----HH---HHhhhc-------CCeeEEE------EeCh--hcHHHHHHHHHhhcC
Q 003127 543 -----------------------S----DE---ELSKLI-------PKIQVMA------RSSP--MDKHTLVKHLRTTLG 577 (845)
Q Consensus 543 -----------------------~----~~---~~~~~~-------~~~~v~~------~~~p--~~K~~~v~~l~~~~g 577 (845)
. .+ .+...+ ....+.. ...| .+|...++.+.++++
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 00 000000 1122221 1223 789999999988765
Q ss_pred ---CEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 578 ---EVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 578 ---~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
+.++++||+.||.+|++.+|+||||
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.3e-05 Score=81.05 Aligned_cols=125 Identities=19% Similarity=0.267 Sum_probs=83.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.+++|+++|+++.++|+.+...+....+.+|+...-..++..++. ...+.+|+--.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~~~----------------~~~KP~~~~~~ 138 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSDEV----------------PRPKPAPDIVR 138 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecCcC----------------CCCCCChHHHH
Confidence 67899999999999999999999999999999999999986422222221110 00111222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE---eCC-CCcHHHHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGI-AGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa---mg~-~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+++.++-. .+.++++||+.+|+.+-++||+... -|. ...+..+..+|+++.+ +..+..++
T Consensus 139 ~~~~~~~~~-~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 139 EALRLLDVP-PEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHcCCC-hhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 334444332 3679999999999999999999653 221 2222356779998854 66665443
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.10 E-value=8.2e-06 Score=81.48 Aligned_cols=92 Identities=27% Similarity=0.311 Sum_probs=68.1
Q ss_pred hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh-c--HH
Q 003127 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM-D--KH 566 (845)
Q Consensus 490 ~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~-~--K~ 566 (845)
+++.+.|+.++++|++++++||.....+.++++.+|+...+ ++.... .... +.....+.++. + |.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~--v~~~~~-~~~~---------~~~~~~~~~~~~~~~K~ 159 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN--VIGNEL-FDNG---------GGIFTGRITGSNCGGKA 159 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG--EEEEEE-ECTT---------CCEEEEEEEEEEESHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE--EEEEee-eecc---------cceeeeeECCCCCCcHH
Confidence 78889999999999999999999999999999999997532 111111 0000 11233444443 4 99
Q ss_pred HHHHHH------HhhcCCEEEEEcCCccCHHHHH
Q 003127 567 TLVKHL------RTTLGEVVAVTGDGTNDAPALH 594 (845)
Q Consensus 567 ~~v~~l------~~~~g~~v~~~GDg~ND~~ml~ 594 (845)
..++.+ +.. ...+.++|||.||++|+|
T Consensus 160 ~~l~~~~~~~~~~~~-~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 160 EALKELYIRDEEDID-PDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHTHT-CCEEEEEESSGGGHHHHH
T ss_pred HHHHHHHHHhhcCCC-CCeEEEEECCHHHHHHhC
Confidence 999999 223 578999999999999996
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.09 E-value=8.7e-06 Score=80.16 Aligned_cols=102 Identities=24% Similarity=0.273 Sum_probs=70.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++++++.+.++.+++.|++++++||.....+..+++.+|+..--...+... .+..+. .+..--....+..|.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~-----~~g~~~---g~~~~~~~~~~~~K~ 144 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFD-----DNGLLT---GPIEGQVNPEGECKG 144 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEEC-----CCCEEe---CccCCcccCCcchHH
Confidence 367999999999999999999999999999999999999863111000000 000000 000000123457899
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhC
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEA 596 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A 596 (845)
..++.+++..+ +.+.++|||.||++|++.|
T Consensus 145 ~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 145 KVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 99988776533 4688999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.3e-05 Score=79.85 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=77.5
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-eChhc
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPMD 564 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~~ 564 (845)
-++.+++.+.++.|++.|+++.++|+.+...+..+.+..|+...-..+++.+...+- ...+.-...+...+.. .....
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~-~g~~~~~~~~~~~~~~~~~g~~ 149 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDN-DGRHIVWPHHCHGCCSCPCGCC 149 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECC-CCcEEEecCCCCccCcCCCCCC
Confidence 368899999999999999999999999999999999999986432233332221110 0000000001001111 11235
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
|..+++.++....+.++++|||.||++|.+.||+-.|
T Consensus 150 K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 150 KGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred HHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 8999999887535678899999999999999987654
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=6e-05 Score=76.76 Aligned_cols=125 Identities=18% Similarity=0.187 Sum_probs=84.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+...-..++..++.. ..+..|+--.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~p~~~~ 145 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLDDVE----------------HAKPDPEPVL 145 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecCcCC----------------CCCCCcHHHH
Confidence 478999999999999999999999999999999999999875322232222110 0112233333
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE---eCCCCcHH-HHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIAGTEV-AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa---mg~~~~~~-ak~~ad~v~~~~~~~~i~~~i 630 (845)
++++.+... .+.++++||+.+|+.+-++||+-.. -|....+. ....+|+++.+ +..+.+.+
T Consensus 146 ~~~~~~~~~-~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~--~~~l~~~i 210 (214)
T PRK13288 146 KALELLGAK-PEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDK--MSDLLAIV 210 (214)
T ss_pred HHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECC--HHHHHHHH
Confidence 444444333 3678899999999999999998533 23112222 34468888754 77776654
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.87 E-value=8e-05 Score=78.68 Aligned_cols=126 Identities=17% Similarity=0.244 Sum_probs=82.1
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++.|++.++++.|+++|++++++|+.+...+..+.+..|+......++.+++.. ..+..|+--
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~~~----------------~~Kp~p~~~ 163 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDTLP----------------QKKPDPAAL 163 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCCCC----------------CCCCCcHHH
Confidence 3678999999999999999999999999999999999888864322222221110 001111112
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeC--CCCcH-HHHhccCEEeccCChhHHHHHH
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMG--IAGTE-VAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg--~~~~~-~ak~~ad~v~~~~~~~~i~~~i 630 (845)
..+++.+.-. .+.++++||+.||+.|.+.||+. +++. .+..+ ..+..+|+++.+ +..+.+++
T Consensus 164 ~~~~~~~g~~-~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~--l~el~~~~ 229 (272)
T PRK13223 164 LFVMKMAGVP-PSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDD--LRALLPGC 229 (272)
T ss_pred HHHHHHhCCC-hhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECC--HHHHHHHH
Confidence 2333333222 36789999999999999999973 4443 11222 244578998844 66666544
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.86 E-value=5.4e-05 Score=77.03 Aligned_cols=122 Identities=17% Similarity=0.239 Sum_probs=80.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+...-..++.+++.. ..+..|+-=.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~p~~~~ 148 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDSLA----------------QRKPHPDPLL 148 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCCCC----------------CCCCChHHHH
Confidence 578999999999999999999999999999999999999864322222221110 0011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-e--CCCCc-HHHHhccCEEeccCChhHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIAGT-EVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-m--g~~~~-~~ak~~ad~v~~~~~~~~i~ 627 (845)
.+.+.+... .+.++++||+.+|+.+.++||+... + |.... +.....||+++.+ +..+.
T Consensus 149 ~~~~~~~~~-~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~--~~~l~ 210 (213)
T TIGR01449 149 LAAERLGVA-PQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS--LNELP 210 (213)
T ss_pred HHHHHcCCC-hhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC--HHHHH
Confidence 333333332 3678899999999999999998765 3 21111 2233568888854 55544
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0001 Score=89.04 Aligned_cols=138 Identities=17% Similarity=0.261 Sum_probs=90.0
Q ss_pred CCChhHHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCC--ccCCceeee--CcccccC-------------------
Q 003127 487 PMRPGVKESVAICRS-AGITVRMVTGDNINTAKAIARECGI--LTDNGIAIE--GPEFREK------------------- 542 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~-~Gi~v~~~TGd~~~ta~~ia~~lgi--~~~~~~~i~--g~~~~~~------------------- 542 (845)
.+.+++.+++++|.+ .|+.|+++|||+..........+++ ...++..+. +..+...
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 477899999999999 5999999999999999887765553 222222211 1110000
Q ss_pred ----------------------CH-------HHHh----hhcC--Cee-------EEEEeChhcHHHHHHHHHhhcC-CE
Q 003127 543 ----------------------SD-------EELS----KLIP--KIQ-------VMARSSPMDKHTLVKHLRTTLG-EV 579 (845)
Q Consensus 543 ----------------------~~-------~~~~----~~~~--~~~-------v~~~~~p~~K~~~v~~l~~~~g-~~ 579 (845)
+. +++. ..+. ... +-.+....+|+..++.+.+..+ +.
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 00 0011 1111 111 1112223689999999987533 68
Q ss_pred EEEEcCCccCHHHHHhC---CeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 580 VAVTGDGTNDAPALHEA---DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 580 v~~~GDg~ND~~ml~~A---~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
++++||+.||.+|++.+ +++|+|| ++ +.+|++.+.+ .+.+.+.++
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~--~~eV~~~L~ 721 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPS--QREVRELLR 721 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCC--HHHHHHHHH
Confidence 99999999999999986 7999999 53 5678999976 355666554
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00012 Score=75.09 Aligned_cols=120 Identities=18% Similarity=0.264 Sum_probs=80.5
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
-++.|++.++++.|+++|+++.++|+........+.+.+|+...-..++.+++.. ...| +
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~Kp--~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAEKLP------------------YSKP--H 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcccCC------------------CCCC--C
Confidence 3678999999999999999999999999999999999999875433333222110 1112 1
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCc---HHHHhccCEEeccCChhHHH
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~---~~ak~~ad~v~~~~~~~~i~ 627 (845)
..+.+...+.+| +.++++||+.||+++-+.||+....-..+. +.-...||+++.+ +..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~--~~dl~ 216 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES--LTELT 216 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC--HHHHh
Confidence 223333333334 678999999999999999998765431221 1223457777744 55543
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00024 Score=73.15 Aligned_cols=124 Identities=17% Similarity=0.160 Sum_probs=84.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+...-..++.+++.. ..+.+|+--.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 158 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGDTLA----------------ERKPHPLPLL 158 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecCcCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999988888889998865332333322110 0122333334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-e--CCC-CcH-HHHhccCEEeccCChhHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-M--GIA-GTE-VAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-m--g~~-~~~-~ak~~ad~v~~~~~~~~i~~~ 629 (845)
.+++.+.-. .+.++++||+.||+.|-+.||+... + |.. ..+ .....+|+++.+ +..+.+.
T Consensus 159 ~~~~~l~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~--~~el~~~ 223 (229)
T PRK13226 159 VAAERIGVA-PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ--PQLLWNP 223 (229)
T ss_pred HHHHHhCCC-hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC--HHHHHHH
Confidence 555555544 4779999999999999999998753 2 211 111 224568998855 6665544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00046 Score=72.70 Aligned_cols=119 Identities=17% Similarity=0.249 Sum_probs=82.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+...-..++.+++ . ..|.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~~----------------------~-~~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGTP----------------------I-LSKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecCC----------------------C-CCCH
Confidence 5789999999999999999999999999999999999998653222222211 0 1122
Q ss_pred HHHHHHHhhc---CCEEEEEcCCccCHHHHHhCCeeEEe---CCCCcHH-HHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTL---GEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEV-AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~---g~~v~~~GDg~ND~~ml~~A~vgIam---g~~~~~~-ak~~ad~v~~~~~~~~i~~~i 630 (845)
.....+.++. .+.++++||+.+|+.+-++||+-... |.+..+. ....+|+++.+ +..+.+.+
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~--~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLET--PSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECC--HHHHHHHH
Confidence 3333333222 35799999999999999999987542 3122222 34568998854 77776654
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00041 Score=72.32 Aligned_cols=117 Identities=15% Similarity=0.097 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+...-..++.+++.. ..+..|+--.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~~~~----------------~~KP~p~~~~ 171 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGSECE----------------HAKPHPDPYL 171 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecCcCC----------------CCCCChHHHH
Confidence 467899999999999999999999999999999999999875433444443321 0122334344
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCC--cH-HHHhccCEEecc
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG--TE-VAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~--~~-~ak~~ad~v~~~ 620 (845)
.+.+.+... .+.++++||+.+|+.+-++||+-...-..+ .+ .....+|+++.+
T Consensus 172 ~a~~~~~~~-~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~ 227 (248)
T PLN02770 172 KALEVLKVS-KDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKD 227 (248)
T ss_pred HHHHHhCCC-hhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEecc
Confidence 555555443 467899999999999999999864421122 12 223468888865
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00041 Score=72.55 Aligned_cols=122 Identities=12% Similarity=0.157 Sum_probs=83.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+...-..++.+++.. ..+..|+-=.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~d~~----------------~~KP~Pe~~~ 172 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAEDVY----------------RGKPDPEMFM 172 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecccCC----------------CCCCCHHHHH
Confidence 468999999999999999999999999999999999999875444444443321 0122233233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCcHHHHhccCEEeccCChhHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
.+++.+.-. .+.++++||+.+|+.+-+.||+-.. +...........+|+++.+ ++.+.
T Consensus 173 ~a~~~l~~~-p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~--~~el~ 231 (260)
T PLN03243 173 YAAERLGFI-PERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR--LDDLS 231 (260)
T ss_pred HHHHHhCCC-hHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC--HHHHH
Confidence 444444433 3678999999999999999998542 2212222223457888755 55443
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00039 Score=70.22 Aligned_cols=107 Identities=13% Similarity=0.107 Sum_probs=74.1
Q ss_pred CCChhHHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVA-ICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~-~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+.|++.+.|+ .++++|++++++|+-....++.+++..++.... .++ +.+++.... ....-..|..++|
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-~~i-~t~le~~~g--------g~~~g~~c~g~~K 163 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-NLI-ASQIERGNG--------GWVLPLRCLGHEK 163 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-cEE-EEEeEEeCC--------ceEcCccCCChHH
Confidence 46899999996 788899999999999999999999997653322 122 222221000 0001123566889
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.+-++..-....+...+-||+.||.|||+.||.+++++
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 88776543221234556799999999999999999985
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00036 Score=71.34 Aligned_cols=124 Identities=23% Similarity=0.253 Sum_probs=82.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~--~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
.++.+++.+.++.|+++|+++.++|+.....+....+.+|+. ..-..++...+.. ..+.+|+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~~~~----------------~~KP~p~ 149 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPSDVA----------------AGRPAPD 149 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCCcCC----------------CCCCCHH
Confidence 368999999999999999999999999999999999999986 4333333332211 0112222
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE--eCCCCc---HH-HHhccCEEeccCChhHHHH
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA--MGIAGT---EV-AKESADVIILDDNFSTIVT 628 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa--mg~~~~---~~-ak~~ad~v~~~~~~~~i~~ 628 (845)
-=...++.+.....+.++++||+.+|+.+-+.||+..+ +. .+. +. ....+|+++.+ +..+..
T Consensus 150 ~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~~--~~~l~~ 217 (220)
T TIGR03351 150 LILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLDS--VADLPA 217 (220)
T ss_pred HHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeecC--HHHHHH
Confidence 22333333332102579999999999999999999862 32 222 22 23457877744 555543
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.0007 Score=68.67 Aligned_cols=107 Identities=15% Similarity=0.077 Sum_probs=73.8
Q ss_pred CCChhHHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESV-AICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I-~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.| +.+++.|++++++|+....-+..+++.+|+.... .++ +.+++. .......-..|..++|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~~i-~t~l~~--------~~tg~~~g~~c~g~~K 164 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-NLI-ASQMQR--------RYGGWVLTLRCLGHEK 164 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-ceE-EEEEEE--------EEccEECCccCCChHH
Confidence 4589999999 5788899999999999999999999999963211 222 222211 0000001123566889
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.+-++..-........+-||+.||.|||+.|+.+++++
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 88777553221344556699999999999999999985
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0015 Score=67.83 Aligned_cols=139 Identities=12% Similarity=0.127 Sum_probs=84.3
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+..++..+++..-.-.. +..+.. .+.-.+ ...+|
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~-dGvltG-~~~P~i----~~~~K 193 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDE-DGVLKG-FKGPLI----HTFNK 193 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECC-CCeEeC-CCCCcc----ccccc
Confidence 368999999999999999999999999999999999999997554333221110000 000000 000001 11456
Q ss_pred HHHHH-HHHhhcC-----CEEEEEcCCccCHHHHHhC---Ce--eEEeCCCCcHH----HHhccCEEeccCChhHHHHHH
Q 003127 566 HTLVK-HLRTTLG-----EVVAVTGDGTNDAPALHEA---DI--GLAMGIAGTEV----AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 566 ~~~v~-~l~~~~g-----~~v~~~GDg~ND~~ml~~A---~v--gIamg~~~~~~----ak~~ad~v~~~~~~~~i~~~i 630 (845)
...+. ...+.++ ..++++|||.||++|..-. .. .|..=+...|. -+++-|+|+.+|.--.++..|
T Consensus 194 ~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D~t~~v~~~i 273 (277)
T TIGR01544 194 NHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQDETLEVANSI 273 (277)
T ss_pred HHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECCCCchHHHHH
Confidence 55443 2333222 5788999999999996533 11 22222122222 456789999887665665544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0004 Score=72.15 Aligned_cols=67 Identities=18% Similarity=0.178 Sum_probs=51.3
Q ss_pred EeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhC--------CeeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 559 RSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEA--------DIGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 559 ~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A--------~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
+..+.+|+..++.+.+.++ ..++++||+.||.+|++.+ ++||+|+ .+ ..+..|++++.+ .+.+.
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~~--~~~v~ 236 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLTG--PQQVL 236 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCCC--HHHHH
Confidence 3445689999998887755 4689999999999999998 5889885 33 246678998864 66666
Q ss_pred HHH
Q 003127 628 TVA 630 (845)
Q Consensus 628 ~~i 630 (845)
+.+
T Consensus 237 ~~L 239 (244)
T TIGR00685 237 EFL 239 (244)
T ss_pred HHH
Confidence 655
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0005 Score=65.82 Aligned_cols=105 Identities=17% Similarity=0.239 Sum_probs=68.8
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---CCccCCc-eeee-CcccccCCHHHHhhhcCCeeE
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC---GILTDNG-IAIE-GPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~l---gi~~~~~-~~i~-g~~~~~~~~~~~~~~~~~~~v 556 (845)
++.+.+++++++++++++|++++++|||+...+. ...+++ |..-+.+ .+.. |........ .+
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~~----------e~ 94 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALHR----------EV 94 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhhc----------cc
Confidence 5788999999999999999999999999988874 555552 3211211 2222 211111110 02
Q ss_pred EEEeChhcHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCee
Q 003127 557 MARSSPMDKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~~----g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
..+..-+.|...++.+.+.+ ...++.+||+.+|+.+-+++|+.
T Consensus 95 i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 95 ISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 22222234888888887743 25677889999999999988764
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00058 Score=71.51 Aligned_cols=98 Identities=19% Similarity=0.178 Sum_probs=68.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+.... ..++.+++.. ..+..|+-=
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~~~~----------------~~KP~p~~~ 162 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTDDVP----------------AGRPAPWMA 162 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccccCC----------------CCCCCHHHH
Confidence 46789999999999999999999999999999999999886531 2333332211 011223332
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
...++.+.-.-.+.++++||+.+|+.+-+.||+..
T Consensus 163 ~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 163 LKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 33444443210356899999999999999999654
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00067 Score=71.61 Aligned_cols=96 Identities=16% Similarity=0.095 Sum_probs=65.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.++.|+++|+++.++||.....+..+.+..|+.... ..++.+++.. ..+..|+-=
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~~~~----------------~~KP~p~~~ 164 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTDDVP----------------AGRPYPWMA 164 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCCcCC----------------CCCCChHHH
Confidence 56789999999999999999999999999988888887765421 2222222110 011222222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v 598 (845)
..+.+.+.-...+.+++|||+.+|+.+-+.||+
T Consensus 165 ~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 165 LKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 333333332112569999999999999999997
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00054 Score=68.73 Aligned_cols=94 Identities=18% Similarity=0.079 Sum_probs=67.9
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
.+++.++..++++.|+++|+++.++||.+...+..+.+.+|+...-..++.+++. ..+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~~~-----------------~~KP~p~~ 166 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWMEDC-----------------PPKPNPEP 166 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeecCC-----------------CCCcCHHH
Confidence 3456677799999999999999999999999999999999987533333332221 11234444
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhC
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 596 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A 596 (845)
-..+++.+... .+.++++||+.+|+.+-++|
T Consensus 167 ~~~~~~~~~~~-~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 167 LILAAKALGVE-ACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred HHHHHHHhCcC-cccEEEEeCCHHHHHHHHhC
Confidence 45555555544 46799999999999987764
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0011 Score=67.57 Aligned_cols=115 Identities=15% Similarity=0.176 Sum_probs=76.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+... ..++++++.. ..+..|+--.
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~i~~~~~~~----------------~~KP~p~~~~ 145 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EVFVTAERVK----------------RGKPEPDAYL 145 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cEEEEHHHhc----------------CCCCCcHHHH
Confidence 5789999999999999999999999988777777777777422 2232222110 0112233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCCcH-HHHhccCEEecc
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTE-VAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~~~-~ak~~ad~v~~~ 620 (845)
...+.+.-. .+.++++||+.+|+.+-+.||+. |++. ++.. .....+|+++.+
T Consensus 146 ~~~~~~g~~-p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 146 LGAQLLGLA-PQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHcCCC-cccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEecc
Confidence 444444433 47899999999999999999984 5554 3322 223457877654
|
|
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0022 Score=69.71 Aligned_cols=64 Identities=22% Similarity=0.217 Sum_probs=50.3
Q ss_pred hcHHHHHHHHHhhcC---C-E--EEEEcCCccCHHHHHh-----CCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---E-V--VAVTGDGTNDAPALHE-----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~-~--v~~~GDg~ND~~ml~~-----A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+.++++ . . ++++||+.||.+||+. +|+||+|| ++.+. ..|++.+.+ .+.+...|+
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~d--p~eV~~~L~ 374 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLRD--PSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcCC--HHHHHHHHH
Confidence 489999999988765 1 2 4789999999999996 69999999 66543 357888865 777777664
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0016 Score=63.19 Aligned_cols=142 Identities=23% Similarity=0.290 Sum_probs=89.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCce----eeeCcccccC---------------CHHHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI----AIEGPEFREK---------------SDEEL 547 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~----~i~g~~~~~~---------------~~~~~ 547 (845)
++-|++.++++.|++. ...+++|-.-.+-+.++|..+|+...+.. -++.....+. +.+++
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 5789999999999876 44555555666778899999999643210 0111111111 11111
Q ss_pred hhhcCCeeEEEEeCh---------------hcHHHHHHHHHhhcC--CEEEEEcCCccCHHHHHhCC-ee-EEeCCCCcH
Q 003127 548 SKLIPKIQVMARSSP---------------MDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEAD-IG-LAMGIAGTE 608 (845)
Q Consensus 548 ~~~~~~~~v~~~~~p---------------~~K~~~v~~l~~~~g--~~v~~~GDg~ND~~ml~~A~-vg-Iamg~~~~~ 608 (845)
.+.+. .+|.|..| ..|.++++.+.+.-+ ...+++||+..|+.||+.+. -| +|+.-||.+
T Consensus 162 fe~lD--e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNe 239 (315)
T COG4030 162 FEKLD--ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNE 239 (315)
T ss_pred HHHHH--HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCc
Confidence 11110 13445444 346666666665422 35688899999999999772 33 555668999
Q ss_pred HHHhccCEEeccCChhHHHHHHH
Q 003127 609 VAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 609 ~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
-+...||+.+.+.+......+|+
T Consensus 240 Yal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 240 YALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred ccccccceEEeccchhhhhHHHH
Confidence 99999999988887777776653
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.001 Score=68.12 Aligned_cols=100 Identities=11% Similarity=0.095 Sum_probs=68.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+...-..++.+++.. ..+.+|+-=.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~~~~----------------~~KP~p~~~~ 156 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFG----------------YPKEDQRLWQ 156 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEeeeCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999888888888888864322232222111 0011122112
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee--EEeC
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG--LAMG 603 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg--Iamg 603 (845)
.+.+.+.-. .+.++++||+.+|+.+-+.||+. +++.
T Consensus 157 ~~~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~~~~v~ 194 (224)
T PRK14988 157 AVAEHTGLK-AERTLFIDDSEPILDAAAQFGIRYCLGVT 194 (224)
T ss_pred HHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 233333322 36799999999999999999996 3444
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0022 Score=66.55 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=33.7
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcC----CccCHHHHHh-CCeeEEeC
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHE-ADIGLAMG 603 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GD----g~ND~~ml~~-A~vgIamg 603 (845)
.+|+..++.|+ . .+.++++|| |.||++||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~-~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-D-FDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-C-cCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 68999999999 5 678899999 8999999996 66788774
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0012 Score=67.39 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=63.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGD----NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd----~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+......++.++... ...|
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~------------------~~Kp- 175 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPG------------------QYQY- 175 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCC------------------CCCC-
Confidence 4555999999999999999999999 6779999999999975433333332211 0112
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
+|.. .+++. + .++++||+.||+.+-+.||+-
T Consensus 176 ~~~~---~l~~~-~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 176 TKTQ---WIQDK-N-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred CHHH---HHHhC-C-CeEEEeCCHHHHHHHHHCCCC
Confidence 2332 33433 4 478999999999999999875
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0025 Score=59.24 Aligned_cols=91 Identities=21% Similarity=0.232 Sum_probs=64.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEE
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDN--------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM 557 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~--------~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ 557 (845)
.++.+++.+++++|+++|++++++|+.. ...+....+.+|+.... ....+
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~--------------------- 81 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-LYACP--------------------- 81 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-EEECC---------------------
Confidence 3678999999999999999999999998 77888889998885210 01100
Q ss_pred EEeChhcHHHHHHHHHhhc----CCEEEEEcC-CccCHHHHHhCCeeE
Q 003127 558 ARSSPMDKHTLVKHLRTTL----GEVVAVTGD-GTNDAPALHEADIGL 600 (845)
Q Consensus 558 ~~~~p~~K~~~v~~l~~~~----g~~v~~~GD-g~ND~~ml~~A~vgI 600 (845)
....| +..+.+.+.+++ .+.++++|| ..+|+.+-+.+|+--
T Consensus 82 ~~~KP--~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 82 HCRKP--KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CCCCC--ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 00112 233333333333 367999999 699999999998753
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0016 Score=66.48 Aligned_cols=97 Identities=16% Similarity=0.180 Sum_probs=67.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|+++|++++++|+.+...+....+.+|+...-..++.+++.. ..+.+|+--.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 157 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSEEEG----------------VEKPHPKIFY 157 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEeccCC----------------CCCCCHHHHH
Confidence 578999999999999999999999999888888899999865322333222211 0112222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGL 600 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgI 600 (845)
.+.+.+... .+.++++||+. +|+.+-++||+-.
T Consensus 158 ~~~~~~~~~-~~~~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 158 AALKRLGVK-PEEAVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred HHHHHcCCC-hhhEEEECCChHHHHHHHHHCCCEE
Confidence 333333322 36799999998 9999999999843
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0031 Score=68.74 Aligned_cols=121 Identities=16% Similarity=0.175 Sum_probs=83.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|+++|+++.++|+.+...+..+.+.+|+..--..++.+++.. ...-.|+-=.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sddv~----------------~~KP~Peifl 279 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAEDVY----------------RGKPDPEMFI 279 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCcCC----------------CCCCCHHHHH
Confidence 467999999999999999999999999999999999999875433344333211 0112233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHH-HHhccCEEeccCChhHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEV-AKESADVIILDDNFSTI 626 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~-ak~~ad~v~~~~~~~~i 626 (845)
..++.+.-. .+.++++||+.+|+.+-+.||+-...-.++.+. -...||+++.+ +..+
T Consensus 280 ~A~~~lgl~-Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s--~~EL 337 (381)
T PLN02575 280 YAAQLLNFI-PERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR--LDEL 337 (381)
T ss_pred HHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC--HHHH
Confidence 455555443 578999999999999999999865432132222 12358888754 5554
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0024 Score=72.99 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=83.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.....+....+.+|+...-..++.+++.. ....|+-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~v~-----------------~~~kP~~-- 390 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQIN-----------------SLNKSDL-- 390 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCCCC-----------------CCCCcHH--
Confidence 678999999999999999999999999999999999999875333344333211 0112321
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCC-CCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~-~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
+...+++.-.+.++++||+.+|+.+-+.||+- |++.. ...+.....+|+++.+ +..+.+.+..
T Consensus 391 -~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~ 455 (459)
T PRK06698 391 -VKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDD--LLELKGILST 455 (459)
T ss_pred -HHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCC--HHHHHHHHHH
Confidence 22222222136799999999999999999984 33331 1122223458898854 7777665543
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0016 Score=65.33 Aligned_cols=98 Identities=12% Similarity=0.188 Sum_probs=68.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+++++|+++|+++.++|+-+...+....+.+|+...-..++..++.. ..+..|+-=.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~~~~~~ 155 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSADAVR----------------AYKPAPQVYQ 155 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehhhcC----------------CCCCCHHHHH
Confidence 468999999999999999999999999999999999999864322333222211 0111222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
.+.+.+.-. .+.++++||+.+|+.+-+.||+-..
T Consensus 156 ~~~~~~~~~-p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 156 LALEALGVP-PDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHhCCC-hhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 344444333 4678999999999999999998643
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0018 Score=66.09 Aligned_cols=88 Identities=18% Similarity=0.231 Sum_probs=63.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~----~~ta~~ia~~lgi~--~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
.+.+++++.++.+++.|+++.++|||. ..++..+.+..|+. .....++.|+..
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~~--------------------- 172 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDKP--------------------- 172 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCCC---------------------
Confidence 477889999999999999999999985 56889999989993 322222222210
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
...+|...+ ++. + .++++||..+|+.+-+.||+-.
T Consensus 173 ~K~~K~~~l---~~~-~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 173 GQYTKTQWL---KKK-N-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred CCCCHHHHH---Hhc-C-CeEEEcCCHHHHHHHHHcCCcE
Confidence 113454433 333 4 4788999999999999998754
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0047 Score=74.94 Aligned_cols=139 Identities=17% Similarity=0.237 Sum_probs=86.4
Q ss_pred CCCChhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHH---cCCccCCceeee--Cc-ccccC----------------
Q 003127 486 DPMRPGVKESVAIC-RSAGITVRMVTGDNINTAKAIARE---CGILTDNGIAIE--GP-EFREK---------------- 542 (845)
Q Consensus 486 d~l~~~~~~~I~~l-~~~Gi~v~~~TGd~~~ta~~ia~~---lgi~~~~~~~i~--g~-~~~~~---------------- 542 (845)
..+.+++.+++++| ++.|+.|+++|||...+....... +++..+++..+. +. .+...
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~ 694 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVM 694 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHH
Confidence 36778999999997 788999999999999999888754 344444443221 11 00000
Q ss_pred --------------------------CH-------HHH----hhhcCC--ee-------EEEEeChhcHHHHHHHHHhh-
Q 003127 543 --------------------------SD-------EEL----SKLIPK--IQ-------VMARSSPMDKHTLVKHLRTT- 575 (845)
Q Consensus 543 --------------------------~~-------~~~----~~~~~~--~~-------v~~~~~p~~K~~~v~~l~~~- 575 (845)
+. +++ ...+.+ .. +-.+..-.+|+..++.+.+.
T Consensus 695 ~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~ 774 (854)
T PLN02205 695 QLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIM 774 (854)
T ss_pred HHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 00 000 000100 00 11122336799999988632
Q ss_pred --cC---CEEEEEcCCccCHHHHHhCC--------------eeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 576 --LG---EVVAVTGDGTNDAPALHEAD--------------IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 576 --~g---~~v~~~GDg~ND~~ml~~A~--------------vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.| +.++++||+.||.+|++.++ ++|.+| .+ ...|.+-+.+ .+.+.++++
T Consensus 775 ~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG-~~----~S~A~y~L~d--~~eV~~lL~ 842 (854)
T PLN02205 775 QERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG-QK----PSKAKYYLDD--TAEIVRLMQ 842 (854)
T ss_pred HhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC-CC----CccCeEecCC--HHHHHHHHH
Confidence 23 47899999999999999885 667777 33 3456777754 566766653
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0056 Score=60.41 Aligned_cols=127 Identities=17% Similarity=0.132 Sum_probs=71.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++.|++.+++++|+++|+++.++|..+. .......+..|+... .++.......
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~--~i~~~~~~~~---------- 96 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD--GIYYCPHHPE---------- 96 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc--eEEECCCCCC----------
Confidence 3679999999999999999999998762 122233444554211 1111000000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCc--H-HHHhcc--CEEeccCChhH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT--E-VAKESA--DVIILDDNFST 625 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~--~-~ak~~a--d~v~~~~~~~~ 625 (845)
+..-..+.+|+--..+++.+... .+.++++||+.+|+.+-+.||+..- +. .|. + .....+ |+++.+ +..
T Consensus 97 -~~~~~~KP~p~~~~~~~~~l~~~-~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ii~~--l~e 171 (181)
T PRK08942 97 -DGCDCRKPKPGMLLSIAERLNID-LAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGAAPGTWVLDS--LAD 171 (181)
T ss_pred -CCCcCCCCCHHHHHHHHHHcCCC-hhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhcccCCCceeecC--HHH
Confidence 00000122233334444444433 4789999999999999999997532 22 222 1 122335 777744 666
Q ss_pred HHHHH
Q 003127 626 IVTVA 630 (845)
Q Consensus 626 i~~~i 630 (845)
+.+.+
T Consensus 172 l~~~l 176 (181)
T PRK08942 172 LPQAL 176 (181)
T ss_pred HHHHH
Confidence 66554
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0015 Score=64.60 Aligned_cols=95 Identities=13% Similarity=0.179 Sum_probs=62.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|+++|+++.++|+... +....+.+|+...-..++.+.+.. ..+..|+-=.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~~~~----------------~~kp~p~~~~ 148 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPAEIK----------------KGKPDPEIFL 148 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehhhcC----------------CCCCChHHHH
Confidence 5789999999999999999999998643 456778888864333333332211 0111222222
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
.+.+.+.-. .+.++++||+.+|+.+-+.||+-.
T Consensus 149 ~~~~~~~~~-~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 149 AAAEGLGVS-PSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHcCCC-HHHeEEEecCHHHHHHHHHcCCEE
Confidence 333333322 356889999999999999999854
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0047 Score=63.31 Aligned_cols=125 Identities=13% Similarity=0.129 Sum_probs=77.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|+ +|+++.++|......+....+.+|+...-..++.+++.. ..+.+|+-=.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~----------------~~KP~p~~~~ 157 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISEQVG----------------VAKPDVAIFD 157 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEECccC----------------CCCCCHHHHH
Confidence 46799999999999 689999999999888888888898864322222221110 0011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeEE-eCCCCcHH-HHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLA-MGIAGTEV-AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgIa-mg~~~~~~-ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+++.+.-...+.++++||+. +|+.+-+.||+-.. +...+.+. ....+|+++.+ +..+.+++
T Consensus 158 ~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 158 YALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 333333321125799999998 79999999998643 33122211 12247887754 66666544
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0025 Score=68.65 Aligned_cols=109 Identities=14% Similarity=0.022 Sum_probs=76.8
Q ss_pred ecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-CCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
..+++.+++.+.+++|++.|++++++||++...+..+.+.+|+.. .-..+ .|.+. . ...+... --.+..|
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i-~~~~~----~---~~~~~~~-~~~kp~p 254 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDL-IGRPP----D---MHFQREQ-GDKRPDD 254 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhh-hCCcc----h---hhhcccC-CCCCCcH
Confidence 467899999999999999999999999999999999999998864 21111 11110 0 0000000 0013456
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
+-+...++.+.....+.++|+||..+|+.+-+.||+-..
T Consensus 255 ~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 255 VVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred HHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 677777776644213789999999999999999998754
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0036 Score=61.69 Aligned_cols=95 Identities=17% Similarity=0.180 Sum_probs=65.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|+++|++++++|+..... .....++|+...-..++.+++.. ..+.+|+--.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~~ 147 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSGDVG----------------RGKPDPDIYL 147 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcCCCC----------------CCCCCHHHHH
Confidence 578999999999999999999999998877 66666688864332333222110 0111222233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
.+.+.+... .+.++++||+..|+.+-+++|+-
T Consensus 148 ~~~~~~~~~-~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LALKKLGLK-PEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHcCCC-cceEEEEcCCHHHHHHHHHcCCE
Confidence 444444433 47899999999999999999874
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0042 Score=63.57 Aligned_cols=122 Identities=13% Similarity=0.105 Sum_probs=77.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|++. ++++++|+.....+....+++|+...-..++...+.. ..+..|+-=.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~~~~~~ 159 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSEDAG----------------IQKPDKEIFN 159 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcCccC----------------CCCCCHHHHH
Confidence 5789999999999999 9999999999999999999999865332333222110 0011222223
Q ss_pred HHHHHH-HhhcCCEEEEEcCCc-cCHHHHHhCCeeEE-eCC-CCcHHHHhccCEEeccCChhHHHH
Q 003127 567 TLVKHL-RTTLGEVVAVTGDGT-NDAPALHEADIGLA-MGI-AGTEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 567 ~~v~~l-~~~~g~~v~~~GDg~-ND~~ml~~A~vgIa-mg~-~~~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
..++.+ .-. .+.++++||+. +|+.+-+.+|+... ... ...+.....+++++.+ +..+..
T Consensus 160 ~~~~~~~~~~-~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~ 222 (224)
T TIGR02254 160 YALERMPKFS-KEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRS--LEELYE 222 (224)
T ss_pred HHHHHhcCCC-chheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECC--HHHHHh
Confidence 344444 322 36799999998 89999999997432 221 1121223356677644 555443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0081 Score=58.35 Aligned_cols=37 Identities=11% Similarity=0.177 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q 003127 491 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL 527 (845)
Q Consensus 491 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~ 527 (845)
.+.+.+.+|+++|++|+.+|.........+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 5678999999999999999999999999999999987
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0028 Score=61.67 Aligned_cols=98 Identities=19% Similarity=0.255 Sum_probs=70.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++.+++.+.+++|+++|++++++|+.+........+.+|+...-..++..++... .+..|+-=
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~~~~~----------------~Kp~~~~~ 139 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSDDVGS----------------RKPDPDAY 139 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGGGSSS----------------STTSHHHH
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccchhhh----------------hhhHHHHH
Confidence 35789999999999999999999999999999999999998743223332222110 01112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
..+++.+.-. .+.++++||+..|+.+-+.||+.-
T Consensus 140 ~~~~~~~~~~-p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 140 RRALEKLGIP-PEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHTSS-GGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHcCCC-cceEEEEeCCHHHHHHHHHcCCeE
Confidence 3444444333 478999999999999999998753
|
... |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0033 Score=59.23 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=73.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC----CccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC-
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG----ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS- 561 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lg----i~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~- 561 (845)
.++|+-++.++.+++.+++++++|+....-...+.+.++ +... .+++.+..-..+. ....++...+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~i--di~sn~~~ih~dg-------~h~i~~~~ds~ 143 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCI--DIVSNNDYIHIDG-------QHSIKYTDDSQ 143 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeee--EEeecCceEcCCC-------ceeeecCCccc
Confidence 589999999999999999999999999888888888776 2210 1111111000000 0000111111
Q ss_pred -hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 562 -PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 562 -p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
-.+|...++.+++. .+.+.++|||+.|+++-+.+|+-.|
T Consensus 144 fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 144 FGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhh
Confidence 25799999999988 7889999999999999999998774
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0052 Score=65.35 Aligned_cols=117 Identities=18% Similarity=0.160 Sum_probs=74.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-CCc-eeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-DNG-IAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~-~~~-~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
++.|++.+.++.|++.|+++.++|+.+......+.+..+... .+. .++.+++.. ..+..|+-
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~----------------~~KP~p~~ 207 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP----------------KKKPDPDI 207 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC----------------CCCCCHHH
Confidence 578999999999999999999999999888887776653211 110 111221100 01122222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcH--HHHhccCEEecc
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTE--VAKESADVIILD 620 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~--~ak~~ad~v~~~ 620 (845)
=..+++.+.-. .+.+++|||+.+|+.+-+.||+....-..+.. .....+|+++.+
T Consensus 208 ~~~a~~~~~~~-p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~ 264 (286)
T PLN02779 208 YNLAAETLGVD-PSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDC 264 (286)
T ss_pred HHHHHHHhCcC-hHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECC
Confidence 34444444433 46799999999999999999987664323321 112458888754
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0028 Score=62.66 Aligned_cols=94 Identities=16% Similarity=0.191 Sum_probs=63.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc-
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD- 564 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~- 564 (845)
-++.|++.+.++.|+++|+++.++|+. ..+....+.+|+...-..++.+++.. +..|..
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~~~~------------------~~kp~~~ 146 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDADEVK------------------EGKPHPE 146 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehhhCC------------------CCCCChH
Confidence 368999999999999999999999998 66788888888864322222221110 112211
Q ss_pred -HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 565 -KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 565 -K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
=..+.+.+... .+.++++||+.+|+.+-+.||+..
T Consensus 147 ~~~~~~~~~~~~-~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 147 TFLLAAELLGVS-PNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred HHHHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCeE
Confidence 12223332222 257889999999999999998853
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0076 Score=58.50 Aligned_cols=113 Identities=11% Similarity=0.070 Sum_probs=72.8
Q ss_pred EEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 478 CIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 478 ~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd-~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
.....+-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+..... ...+...+. ..+
T Consensus 36 ~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~------------~~~~~~~Fd-~iv 102 (174)
T TIGR01685 36 IIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGK------------TVPMHSLFD-DRI 102 (174)
T ss_pred EEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCC------------cccHHHhce-eee
Confidence 44444445578899999999999999999999987 8889999999999851110 000000010 011
Q ss_pred EEEeChhcH--HHHHHHHHhhc-----CCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 557 MARSSPMDK--HTLVKHLRTTL-----GEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 557 ~~~~~p~~K--~~~v~~l~~~~-----g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.+...+..| ..+.+.+.+.. .+.++++||+..|+.+-++||+-++.-
T Consensus 103 ~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v 156 (174)
T TIGR01685 103 EIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYC 156 (174)
T ss_pred eccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEc
Confidence 111111112 23445554321 368999999999999999999877543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0048 Score=68.44 Aligned_cols=116 Identities=17% Similarity=0.148 Sum_probs=75.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR-ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~-~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.+++|++.|+++.++|+.....+....+ ..|+...-..++.+++.. ..+..|+-=
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~----------------~~KP~p~~~ 156 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVE----------------KGKPSPDIF 156 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcC----------------CCCCCHHHH
Confidence 467999999999999999999999999888877665 677754333333332210 011222333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCc--HHHHhccCEEecc
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT--EVAKESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~--~~ak~~ad~v~~~ 620 (845)
..+++.+.-. .+.++++||+.+|+.+-+.||+... +. .+. +.....+|.++.+
T Consensus 157 ~~a~~~lgv~-p~~~l~VGDs~~Di~aA~~aGi~~I~v~-~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 157 LEAAKRLNVE-PSNCLVIEDSLPGVMAGKAAGMEVIAVP-SIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHcCCC-hhHEEEEeCCHHHHHHHHHcCCEEEEEC-CCCcchhhccCccEEeCC
Confidence 3444444333 4679999999999999999998744 33 322 2223446666543
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0053 Score=60.02 Aligned_cols=99 Identities=14% Similarity=0.002 Sum_probs=59.4
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNIN--------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR 559 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~--------ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~ 559 (845)
+-|++++++++|++.|+++.++|+.+.. ......+..|+.. .+.......+. .-..+
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~---~~~~~~~~~~~------------~~~~K 93 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDD---IYLCPHKHGDG------------CECRK 93 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCE---EEECcCCCCCC------------CCCCC
Confidence 6799999999999999999999987631 2233344555532 11100000000 00011
Q ss_pred eChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 560 SSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 560 ~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
..|+-=.++++.+... .+.++++||+.+|+.+-++||+-...
T Consensus 94 P~p~~~~~~~~~l~~~-p~~~i~IGD~~~Di~aA~~aGi~~i~ 135 (173)
T PRK06769 94 PSTGMLLQAAEKHGLD-LTQCAVIGDRWTDIVAAAKVNATTIL 135 (173)
T ss_pred CCHHHHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 2222223444444332 36799999999999999999987653
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.012 Score=57.83 Aligned_cols=124 Identities=18% Similarity=0.124 Sum_probs=64.7
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcC
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 552 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~ 552 (845)
+.|++.+++++|+++|+++.++|.-+. .....+..+.|+... .++.......... +. .
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~i~~~~~~~~~~~-~~----~ 99 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLD--GIYYCPHHPEGVE-EF----R 99 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCcc--EEEECCCCCcccc-cc----c
Confidence 578999999999999999999998763 111233333443311 1110000000000 00 0
Q ss_pred CeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE--EeCCCCcH---HHHhccCEEecc
Q 003127 553 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL--AMGIAGTE---VAKESADVIILD 620 (845)
Q Consensus 553 ~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI--amg~~~~~---~ak~~ad~v~~~ 620 (845)
...-..+..|+-=..+.+.+.-. .+.++|+||..+|+.+-++||+.. .+. .|.. .....||+++.+
T Consensus 100 ~~~~~~KP~p~~~~~a~~~~~~~-~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 100 QVCDCRKPKPGMLLQARKELHID-MAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAENIADWVLNS 170 (176)
T ss_pred CCCCCCCCCHHHHHHHHHHcCcC-hhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCcccccccccCCEEecc
Confidence 00000011222222333333322 367889999999999999999853 333 3332 122348888854
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0081 Score=57.44 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHH
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 567 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 567 (845)
..+++.+.++.|+++|+++.++|+.....+....+.. +......++..++ +..+..|+-=..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~~-----------------~~~Kp~~~~~~~ 126 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSDE-----------------FGAKPEPEIFLA 126 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecCC-----------------CCCCcCHHHHHH
Confidence 4478999999999999999999999999998888875 4322111211111 101112222233
Q ss_pred HHHHHHhhcCCEEEEEcCCccCHHHHHhCC
Q 003127 568 LVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597 (845)
Q Consensus 568 ~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~ 597 (845)
+.+.+.-. . .++++||+.+|+.+-+.||
T Consensus 127 ~~~~~~~~-~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 127 ALESLGLP-P-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHcCCC-C-CEEEEeCCHHHHHHHHHcc
Confidence 33333322 3 7899999999999988875
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.014 Score=55.41 Aligned_cols=98 Identities=24% Similarity=0.330 Sum_probs=61.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++.|++.++++.|+++|+++.++|..+. ..+....+.+|+.... ..........
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-~~~~~~~~~~---------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDG-VLFCPHHPAD---------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeE-EEECCCCCCC----------
Confidence 4689999999999999999999998762 4556677778875210 0100000000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
.... ..| +.++.+...++++ +.++++||...|+.+-+.+|+-..
T Consensus 96 ---~~~~-~KP--~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 96 ---NCSC-RKP--KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred ---CCCC-CCC--CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0000 122 2333333333334 679999999999999999988643
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.019 Score=57.91 Aligned_cols=88 Identities=17% Similarity=0.138 Sum_probs=59.8
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~ 561 (845)
+-|.-|++.+.++.+++.|++|+++|||+... +..-.++.|+..-..+++.+.+-. ....
T Consensus 118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~~LiLR~~~d~-----------------~~~~ 180 (229)
T TIGR01675 118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWKHLILRGLEDS-----------------NKTV 180 (229)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcCeeeecCCCCC-----------------CchH
Confidence 34778999999999999999999999999765 444455678764332333221000 0001
Q ss_pred hhcHHHHHHHHHhhcC-CEEEEEcCCccCH
Q 003127 562 PMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 590 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~ 590 (845)
.+-|...-+.+.+. | .+++.+||..+|.
T Consensus 181 ~~yKs~~R~~l~~~-GYrIv~~iGDq~sDl 209 (229)
T TIGR01675 181 VTYKSEVRKSLMEE-GYRIWGNIGDQWSDL 209 (229)
T ss_pred hHHHHHHHHHHHhC-CceEEEEECCChHHh
Confidence 12277777777766 6 5788999999997
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.01 Score=59.76 Aligned_cols=95 Identities=14% Similarity=0.170 Sum_probs=61.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+++++|+++|+++.++|+-... .....+.+|+...-..++...+.. ..+.+|+-=.
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~~~~----------------~~KP~~~~~~ 167 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSYEVG----------------AEKPDPKIFQ 167 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeecccC----------------CCCCCHHHHH
Confidence 57799999999999999999999986654 567778888754222222211100 0011222122
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCee
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIG 599 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vg 599 (845)
.+++.+... .+.+++|||+. +|+.+-++||+-
T Consensus 168 ~~~~~~~~~-~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 168 EALERAGIS-PEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHcCCC-hhHEEEECCCchHHHHHHHHcCCe
Confidence 333333322 36799999997 899999999864
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.014 Score=56.89 Aligned_cols=87 Identities=21% Similarity=0.230 Sum_probs=61.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh--h
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~-~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~ 563 (845)
++.+++.+++++|++.|++++++|+.+ ...+..+.+.+|+.. ......| +
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------~~~~~KP~p~ 95 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------LPHAVKPPGC 95 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------EcCCCCCChH
Confidence 578999999999999999999999988 677777888887642 1111122 2
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeEE
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLA 601 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgIa 601 (845)
-=..+++.+... .+.++++||.. .|+.+-+.||+-..
T Consensus 96 ~~~~~l~~~~~~-~~~~l~IGDs~~~Di~aA~~aGi~~i 133 (170)
T TIGR01668 96 AFRRAHPEMGLT-SEQVAVVGDRLFTDVMGGNRNGSYTI 133 (170)
T ss_pred HHHHHHHHcCCC-HHHEEEECCcchHHHHHHHHcCCeEE
Confidence 112223332222 35799999998 79999999998543
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.092 Score=56.85 Aligned_cols=64 Identities=20% Similarity=0.255 Sum_probs=47.5
Q ss_pred hcHHHHHHHHHhhcC------CEEEEEcCCccCHHHHHhC-----CeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g------~~v~~~GDg~ND~~ml~~A-----~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+.+.++ ..++++||...|-.|++.. |+||.+| .... ...|++.+.+ .+.+.+.|+
T Consensus 282 ~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG-~~~k--~T~A~y~L~d--p~eV~~fL~ 356 (366)
T PLN03017 282 WDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS-KFPK--DTDASYSLQD--PSEVMDFLA 356 (366)
T ss_pred CCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC-CCCC--CCcceEeCCC--HHHHHHHHH
Confidence 489999999987654 2578999999999999855 5888888 3221 3568888854 777776663
|
|
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.016 Score=55.68 Aligned_cols=99 Identities=21% Similarity=0.184 Sum_probs=62.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++-|++.+++++|+++|++++++|.. ....+..+.+.+|+.- . .++.+......
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f-d-~ii~~~~~~~~--------- 97 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF-D-DVLICPHFPDD--------- 97 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce-e-EEEECCCCCCC---------
Confidence 46789999999999999999999985 2446677778888751 1 11111000000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
.... .. -|..+++.+.++++ +.+.++||+.+|+.+-+.||+....
T Consensus 98 ---~~~~-~K--P~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~ 145 (161)
T TIGR01261 98 ---NCDC-RK--PKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQ 145 (161)
T ss_pred ---CCCC-CC--CCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEE
Confidence 0000 01 22334444433333 5699999999999999999987653
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.085 Score=55.17 Aligned_cols=49 Identities=29% Similarity=0.388 Sum_probs=38.8
Q ss_pred EEeeecCC----CChhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCcc
Q 003127 480 GIVGIKDP----MRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILT 528 (845)
Q Consensus 480 G~~~~~d~----l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~lgi~~ 528 (845)
|++.-.++ +-|++.++|++|+++|++++++||++..+ .....+++|+..
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~ 65 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDI 65 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 55555565 88999999999999999999999987664 555566678753
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.025 Score=52.14 Aligned_cols=39 Identities=5% Similarity=0.135 Sum_probs=35.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGD-NINTAKAIARECG 525 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd-~~~ta~~ia~~lg 525 (845)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999999999999999999 7777777777776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.057 Score=56.19 Aligned_cols=87 Identities=13% Similarity=0.178 Sum_probs=60.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~ 561 (845)
..++-|++.+.++.+++.|+++.++|+|.... +....+..|+..... -.++.|..
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----------------------d~lllr~~ 173 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----------------------EHLLLKKD 173 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----------------------ceEEeCCC
Confidence 44578999999999999999999999998443 445667788854210 01333333
Q ss_pred hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHH
Q 003127 562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH 594 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~ 594 (845)
...|..-.+.+.+. -..++++||..+|.....
T Consensus 174 ~~~K~~rr~~I~~~-y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 174 KSSKESRRQKVQKD-YEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred CCCcHHHHHHHHhc-CCEEEEECCCHHHhhhhh
Confidence 34566566666554 467999999999986543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.029 Score=57.27 Aligned_cols=98 Identities=16% Similarity=0.234 Sum_probs=61.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCccCCceeeeCc--ccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKA-IARECGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~-ia~~lgi~~~~~~~i~g~--~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
++.|++.+.|+.|++.|+++.++||-....... ..+..++......+++++ +.. ..+..|+
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~----------------~~KP~p~ 141 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVK----------------QGKPAPD 141 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhcc----------------CCCCCcH
Confidence 468999999999999999999999987654432 222223332211222222 100 0111222
Q ss_pred cHHHHHHHHH---hhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 564 DKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 564 ~K~~~v~~l~---~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
-=...++.+. -. .+.+++|||+..|+.+-+.||+...
T Consensus 142 ~~~~a~~~~~~~~~~-~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 142 IFLAAARRFEDGPVD-PGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred HHHHHHHHhCCCCCC-ccceEEEeccHhhHHHHHHCCCeEE
Confidence 2244444443 22 3679999999999999999998654
|
|
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.015 Score=55.23 Aligned_cols=96 Identities=15% Similarity=-0.047 Sum_probs=66.0
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
.-+++|++.+.++.|+ .++++.++|.-+...+..+.+.+|+...- ..++.+++.. +..|.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~~------------------~~KP~ 103 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDECV------------------FVKGK 103 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECcccc------------------ccCCe
Confidence 3367999999999998 57999999999999999999999875321 2233332211 11121
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
=.+.++.+... .+.++++||..+|+.+-+.+++-|.
T Consensus 104 -~~k~l~~l~~~-p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 104 -YVKDLSLLGRD-LSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred -EeecHHHcCCC-hhcEEEEECCHHHhhcCccCEEEec
Confidence 11122333333 4789999999999999888877663
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.046 Score=68.56 Aligned_cols=129 Identities=15% Similarity=0.144 Sum_probs=83.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc-cCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGIL-TDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~-~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+-|++.+.++.|+++|+++.++|+.....+....+.+|+. ..-..++.+++.. ..+-.|+-=
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~----------------~~KP~Pe~~ 224 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFE----------------NLKPAPDIF 224 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECcccc----------------cCCCCHHHH
Confidence 35789999999999999999999999999999999999985 2222333332211 011222222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCc---HHHHhccCEEeccCChhHHHHHHHHH
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT---EVAKESADVIILDDNFSTIVTVAKWG 633 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~---~~ak~~ad~v~~~~~~~~i~~~i~~g 633 (845)
..+++.+... .+.++++||..+|+.+-+.||+-.. +. .+. +.....+|+++.+-..-.+..++..|
T Consensus 225 ~~a~~~lgv~-p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~ 294 (1057)
T PLN02919 225 LAAAKILGVP-TSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDAGPSLIRKDIGNISLSDILTGG 294 (1057)
T ss_pred HHHHHHcCcC-cccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhCCCCEEECChHHCCHHHHHhcC
Confidence 3444444433 4679999999999999999998433 33 222 22345678888663333344444433
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.036 Score=53.68 Aligned_cols=94 Identities=9% Similarity=0.041 Sum_probs=58.7
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNIN------------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~------------ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
+-|++.+++++|+++|+++.++|..+.. .+..+.+.+|+.. ..++.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~~~---------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATHAG---------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecCCC----------------
Confidence 3489999999999999999999975542 4567788888743 122211110
Q ss_pred EEEEeChhcHHHHHHHHH--hhcCCEEEEEcCCc--------cCHHHHHhCCeeE
Q 003127 556 VMARSSPMDKHTLVKHLR--TTLGEVVAVTGDGT--------NDAPALHEADIGL 600 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~--~~~g~~v~~~GDg~--------ND~~ml~~A~vgI 600 (845)
......|+-=..+.+.+. -. .+.+++|||.. +|+.+-++||+-.
T Consensus 105 ~~~KP~p~~~~~~~~~~~~~~~-~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 LYRKPMTGMWEYLQSQYNSPIK-MTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred CCCCCccHHHHHHHHHcCCCCC-chhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111121223333332 12 25799999986 6999999998754
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.052 Score=55.06 Aligned_cols=99 Identities=11% Similarity=0.164 Sum_probs=66.3
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECG---ILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lg---i~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~ 561 (845)
+-++.+++.+++++|+++|+++.++|..+......+.+..+ +..- +++ .+ +..+.....
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~----f~~-------------~f-d~~~g~KP~ 154 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY----FSG-------------YF-DTTVGLKTE 154 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh----cce-------------EE-EeCcccCCC
Confidence 45789999999999999999999999998877777666552 2210 000 00 000111223
Q ss_pred hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
|+-=..+++.+.-. .+.++++||...|+.+-++||+-...
T Consensus 155 p~~y~~i~~~lgv~-p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 155 AQSYVKIAGQLGSP-PREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred HHHHHHHHHHhCcC-hhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 33334455555433 46799999999999999999997653
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.11 Score=53.77 Aligned_cols=95 Identities=15% Similarity=0.167 Sum_probs=62.4
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCcc-CCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK--AIARECGILT-DNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~--~ia~~lgi~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
|.+.-..++-|++.+++++|+++|+++.++|........ ...+++|+.. ....+++..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~------------------- 77 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSG------------------- 77 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccH-------------------
Confidence 556666788999999999999999999999986655444 5678888864 222222111
Q ss_pred EEEeChhcHHHHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCe
Q 003127 557 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI 598 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~--~g~~v~~~GDg~ND~~ml~~A~v 598 (845)
......+.+.+++. .++.+.++||+.+|...+..++.
T Consensus 78 -----~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 78 -----EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred -----HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCc
Confidence 11112222222221 14679999999999998875543
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.04 Score=56.03 Aligned_cols=106 Identities=21% Similarity=0.270 Sum_probs=71.3
Q ss_pred CCChhHHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh-h
Q 003127 487 PMRPGVKESVAIC--RSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP-M 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l--~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p-~ 563 (845)
|+.|+.++.++.+ ++.|+.++++|--+..-...+.+.-|+...-..+++.+..-+... .+.-......-+.++.| .
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G-~l~v~pyh~h~C~~C~~Nm 149 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADG-RLRVRPYHSHGCSLCPPNM 149 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCc-eEEEeCccCCCCCcCCCcc
Confidence 6789999999999 568999999999999999999999999765444444432111100 00000000012234443 4
Q ss_pred cHHHHHHHHHhhc---C---CEEEEEcCCccCHHHH
Q 003127 564 DKHTLVKHLRTTL---G---EVVAVTGDGTNDAPAL 593 (845)
Q Consensus 564 ~K~~~v~~l~~~~---g---~~v~~~GDg~ND~~ml 593 (845)
-|..+++.+++.. | +.|.++|||.||....
T Consensus 150 CK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~ 185 (234)
T PF06888_consen 150 CKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPA 185 (234)
T ss_pred chHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcc
Confidence 7999999888651 3 6899999999996543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.064 Score=58.25 Aligned_cols=99 Identities=22% Similarity=0.168 Sum_probs=62.1
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL 550 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~ 550 (845)
-++.|++.+.+++|+++|++++++|+- ....+..+.+..|+.. +..++......+.
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f-d~i~i~~~~~sd~-------- 99 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF-DEVLICPHFPEDN-------- 99 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce-eeEEEeCCcCccc--------
Confidence 367899999999999999999999983 2344566777777742 1111111000000
Q ss_pred cCCeeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 551 IPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 551 ~~~~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..++ ..|..++..+.++++ +.+.|+||+.+|+.+-+.||+-..
T Consensus 100 -----~~~r---KP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 100 -----CSCR---KPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred -----CCCC---CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0011 123334433333322 679999999999999999998754
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.11 Score=49.01 Aligned_cols=103 Identities=19% Similarity=0.251 Sum_probs=70.2
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc-----CCccCCceeeeCc-cc-ccCCHHHHhhhcCCe
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIAREC-----GILTDNGIAIEGP-EF-REKSDEELSKLIPKI 554 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~l-----gi~~~~~~~i~g~-~~-~~~~~~~~~~~~~~~ 554 (845)
.|..++++.+..++++++|++++.+|+|+.-.+. ...++. ++. .+.++..+ .+ .....
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP--~Gpv~~sP~~l~~al~r---------- 92 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLP--DGPVLLSPDSLFSALHR---------- 92 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCC--CCCEEECCcchhhhhhc----------
Confidence 4689999999999999999999999999965443 333333 332 22222211 11 00111
Q ss_pred eEEEEeChhcHHHHHHHHHhhc----CCEEEEEcCCccCHHHHHhCCee
Q 003127 555 QVMARSSPMDKHTLVKHLRTTL----GEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 555 ~v~~~~~p~~K~~~v~~l~~~~----g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
.+..+-..+.|...++.++..+ ....+.+|+..+|+.+-+++|+-
T Consensus 93 Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 1444444578999999998763 35788889999999999988764
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.1 Score=48.95 Aligned_cols=86 Identities=20% Similarity=0.294 Sum_probs=64.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
....|+.++=+..++++|++++++|..+...+...++.+|+.. ++--..|-.+
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f---------------------------i~~A~KP~~~ 97 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF---------------------------IYRAKKPFGR 97 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce---------------------------eecccCccHH
Confidence 4578999999999999999999999999999999999999974 3222233222
Q ss_pred --HHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCee
Q 003127 566 --HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIG 599 (845)
Q Consensus 566 --~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vg 599 (845)
.+.++.++-. .+.|+|+||. ..|+-.=..||+-
T Consensus 98 ~fr~Al~~m~l~-~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 98 AFRRALKEMNLP-PEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred HHHHHHHHcCCC-hhHEEEEcchhhhhhhcccccCcE
Confidence 3344444433 4789999998 4587776666654
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.029 Score=54.79 Aligned_cols=121 Identities=22% Similarity=0.257 Sum_probs=74.5
Q ss_pred CCChhHHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc-CCeeEEEEeCh-h
Q 003127 487 PMRPGVKESVAICRSAGI-TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI-PKIQVMARSSP-M 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi-~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~-~~~~v~~~~~p-~ 563 (845)
|+.|+..++|+.+++.|- .+.++|--|......+.+..|+..--..+.+.+...+..- .+.-.. ..-.-+.++.+ -
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G-~L~v~pyH~~hsC~~CPsNm 162 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASG-RLLVRPYHTQHSCNLCPSNM 162 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCC-cEEeecCCCCCccCcCchhh
Confidence 678999999999999997 9999999999999999999988532111111111000000 000000 00012222222 3
Q ss_pred cHHHHHHHHHhhc---C---CEEEEEcCCccC-HHHHHhCCeeEEeCCCCcH
Q 003127 564 DKHTLVKHLRTTL---G---EVVAVTGDGTND-APALHEADIGLAMGIAGTE 608 (845)
Q Consensus 564 ~K~~~v~~l~~~~---g---~~v~~~GDg~ND-~~ml~~A~vgIamg~~~~~ 608 (845)
-|+.++..++... | +.+..+|||.|| +|+++...--+||.-.|-+
T Consensus 163 CKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 163 CKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred hhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCc
Confidence 4777777776541 1 378999999999 4677777777777544444
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=95.04 E-value=0.069 Score=57.90 Aligned_cols=92 Identities=10% Similarity=0.099 Sum_probs=69.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++.+++.+++++|+++|+++.++|..+...+..+.+. +|+...- ......+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-------------------------~~~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-------------------------DARSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-------------------------eEEEEec
Confidence 3578999999999999999999999999999999988 7765310 1112223
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
..|...++.+.+.+| +.++++||...|+.+.+.+...+.+-
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 456655555555444 78999999999999999998876543
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.028 Score=56.91 Aligned_cols=99 Identities=13% Similarity=0.121 Sum_probs=57.4
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINT--AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t--a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
-++.|++.+.++.|+++|+++.++|...... ........++...-..++...+. -..+.+|+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~----------------~~~KP~p~ 156 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVESCLE----------------GLRKPDPR 156 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEeeec----------------CCCCCCHH
Confidence 3578999999999999999999999875432 22222233332211111111000 00111222
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
-=..+++.+.-. .+.++++||...|+.+-++||+-..
T Consensus 157 ~~~~~~~~~g~~-~~~~l~i~D~~~di~aA~~aG~~~i 193 (211)
T TIGR02247 157 IYQLMLERLGVA-PEECVFLDDLGSNLKPAAALGITTI 193 (211)
T ss_pred HHHHHHHHcCCC-HHHeEEEcCCHHHHHHHHHcCCEEE
Confidence 223333333322 3568888999999999999998543
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.025 Score=57.71 Aligned_cols=96 Identities=10% Similarity=0.104 Sum_probs=64.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.+++.+.++.| ++++.++|+.+...+....+..|+...- ..++++.+.. ..+..|+-=
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~~~~~----------------~~KP~p~~~ 148 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSGYDIQ----------------RWKPDPALM 148 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeHHhcC----------------CCCCChHHH
Confidence 4668999999988 4999999999988888888888886432 1222222111 001122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
..+.+.+.-. .+.++++||+.+|+.+-++||+.+..
T Consensus 149 ~~a~~~~~~~-p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 149 FHAAEAMNVN-VENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHcCCC-HHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 3334443322 36789999999999999999988764
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.055 Score=47.48 Aligned_cols=90 Identities=22% Similarity=0.303 Sum_probs=56.1
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia---~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
|++...+++-|++.++|++|+++|++++++|..+..+...++ +.+|+...... +
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~-----------------------i 63 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDE-----------------------I 63 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGG-----------------------E
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCE-----------------------E
Confidence 555567788999999999999999999999988755544444 66777643211 2
Q ss_pred EEEeChhcHHHHHHHHHh-hcCCEEEEEcCCccCHHHHHhCCe
Q 003127 557 MARSSPMDKHTLVKHLRT-TLGEVVAVTGDGTNDAPALHEADI 598 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~-~~g~~v~~~GDg~ND~~ml~~A~v 598 (845)
+. | =....+.+++ +.+..|.++|.. .....++.+|+
T Consensus 64 ~t---s--~~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 64 IT---S--GMAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EE---H--HHHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred EC---h--HHHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 22 1 1223444444 236788888865 56667776654
|
... |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.13 Score=53.39 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=41.4
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 527 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---lgi~ 527 (845)
|++.-.+++-|++.+++++|+++|++++++|++...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 66666778999999999999999999999999998887777776 4664
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.56 E-value=0.082 Score=52.97 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=59.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+++++|+++|+++.++|.-+.......... .++...-..++...+.. ....+|+-=
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~----------------~~KP~p~~~ 147 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLG----------------MRKPEARIY 147 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccC----------------CCCCCHHHH
Confidence 4689999999999999999999999886655433222 23321111111111100 001112222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..+++.+... .+.++++||+..|+.+-++||+...
T Consensus 148 ~~~~~~~~~~-p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 148 QHVLQAEGFS-AADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHcCCC-hhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 3333443333 3678999999999999999998654
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=94.25 E-value=0.21 Score=51.99 Aligned_cols=50 Identities=14% Similarity=0.082 Sum_probs=42.3
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 529 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~lgi~~~ 529 (845)
|++.-.+++-+++.++|++|+++|++++++|| |+........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 45555666677999999999999999999995 889998999999998754
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.12 Score=55.68 Aligned_cols=97 Identities=18% Similarity=0.197 Sum_probs=61.9
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIA---RECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia---~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
|++.-.+.+-|++.++|++|+++|++++++|+++..+...++ +++|+...... +
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~-----------------------I 93 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEE-----------------------I 93 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhh-----------------------E
Confidence 666666778899999999999999999999999976666665 56777532111 2
Q ss_pred EEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 557 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
+... ......++......++.|.. +++..|...++.+|+-+.-
T Consensus 94 ~ts~--~~~~~~l~~~~~~~~~~V~v-iG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 94 FSSS--FAAAAYLKSINFPKDKKVYV-IGEEGILEELELAGFQYLG 136 (311)
T ss_pred eehH--HHHHHHHHhhccCCCCEEEE-EcCHHHHHHHHHCCCEEec
Confidence 2211 11222222211110244555 5567889999988876543
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=93.99 E-value=0.14 Score=50.56 Aligned_cols=98 Identities=10% Similarity=0.027 Sum_probs=64.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.+++|+ .+++++|..+...+....+.+|+...-..++..++.... ....+.+|+-=.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~------------~~~~KP~p~~~~ 148 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTANPD------------YLLPKPSPQAYE 148 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecccCc------------cCCCCCCHHHHH
Confidence 46789999999997 479999999999999999999986432223322211100 000011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
.+++.+... .+.++++||...|+.+=+.||+..
T Consensus 149 ~~~~~~~~~-~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 149 KALREAGVD-PERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHhCCC-ccceEEEeCCHHHHHHHHHcCCEE
Confidence 444444433 467889999999999999998764
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.96 E-value=0.1 Score=51.63 Aligned_cols=91 Identities=13% Similarity=0.104 Sum_probs=62.0
Q ss_pred HHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHH
Q 003127 492 VKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKH 571 (845)
Q Consensus 492 ~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~ 571 (845)
..+.++.|++. +++.++|+.....+....+..|+...-..+++.++.. ..+..|+-=....+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~~~~----------------~~KP~p~~~~~~~~~ 154 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAADDVQ----------------HHKPAPDTFLRCAQL 154 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehhhcc----------------CCCCChHHHHHHHHH
Confidence 36899999875 8999999999999999999999865322333322211 011223333344444
Q ss_pred HHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 572 LRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 572 l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
++.. .+.++++||..+|+.+-+.||+-.
T Consensus 155 ~~~~-~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 155 MGVQ-PTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred cCCC-HHHeEEEeccHhhHHHHHHCCCEE
Confidence 4433 356888999999999999999864
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=93.67 E-value=0.19 Score=50.24 Aligned_cols=101 Identities=15% Similarity=0.118 Sum_probs=60.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|++.+ +.+++|..+........+.+|+..-.. ..+ +..+.++... .|-
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~-----------------~~f-~~i~~~~~~~-~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFP-----------------GAF-SEVLMCGHDE-SKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCC-----------------Ccc-cEEEEeccCc-ccH
Confidence 46899999999999985 566677755444444555666542100 000 0112222221 244
Q ss_pred HHHHHHHhhcC-CEEEEEcCCccCHHHHHhC--CeeEEeCCCCc
Q 003127 567 TLVKHLRTTLG-EVVAVTGDGTNDAPALHEA--DIGLAMGIAGT 607 (845)
Q Consensus 567 ~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A--~vgIamg~~~~ 607 (845)
.++....+++| +.++++||..+|+.+-++| |+-...-..+.
T Consensus 134 ~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~ 177 (197)
T PHA02597 134 KLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGE 177 (197)
T ss_pred HHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEecchh
Confidence 55554444445 4588999999999999999 98654322443
|
2 hypothetical protein; Provisional |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.76 Score=49.72 Aligned_cols=64 Identities=17% Similarity=0.260 Sum_probs=47.1
Q ss_pred hcHHHHHHHHHhhcC------CEEEEEcCCccCHHHHHhC-----CeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEA-----DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g------~~v~~~GDg~ND~~ml~~A-----~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+.+.++ ..++++||...|-.|++.. |+||-+| .+.. ...|++.+.+ .+.+.++|.
T Consensus 268 ~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~d--p~eV~~~L~ 342 (354)
T PLN02151 268 WDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQE--PDEVMEFLE 342 (354)
T ss_pred CCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCCC--HHHHHHHHH
Confidence 489999999987644 1378999999999999853 7788777 3322 2368898865 777776664
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.37 E-value=0.37 Score=46.79 Aligned_cols=52 Identities=21% Similarity=0.347 Sum_probs=43.4
Q ss_pred eEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH---cCCc
Q 003127 476 YTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE---CGIL 527 (845)
Q Consensus 476 ~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~---lgi~ 527 (845)
+.+-|.+-++|..-|++.|++++|++++.+|..+|....++-+.+.++ +|+.
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 346699999999999999999999999999999998877766666554 5664
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.31 Score=50.28 Aligned_cols=64 Identities=23% Similarity=0.293 Sum_probs=33.5
Q ss_pred EEEEeChhcHHHHHHHHHhhcCC------EEEEEcCCccCHHHHHhC------CeeEEeCCCCc-HHHHhccCEEecc
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGE------VVAVTGDGTNDAPALHEA------DIGLAMGIAGT-EVAKESADVIILD 620 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~------~v~~~GDg~ND~~ml~~A------~vgIamg~~~~-~~ak~~ad~v~~~ 620 (845)
+-.|..-..|+.+++.+.+..+. .++++||...|-.|++.. +++|-++ ... .....+|++-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 33444446699999999887553 688999999999999863 6788888 433 2344567776654
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.17 Score=51.60 Aligned_cols=101 Identities=16% Similarity=0.171 Sum_probs=78.4
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++.|++.+.++.|++.|+.+.+.|+.+...+..+.+.+|+...-..++++++.. -.+..|+-=
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~dv~----------------~~KP~Pd~y 148 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTADDVA----------------RGKPAPDIY 148 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHHHHh----------------cCCCCCHHH
Confidence 4688999999999999999999999999999999999999986543444333321 113455655
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
....+.|.-. ...++++.|+.|.+.+-++||.-+-.-
T Consensus 149 L~Aa~~Lgv~-P~~CvviEDs~~Gi~Aa~aAGm~vv~v 185 (221)
T COG0637 149 LLAAERLGVD-PEECVVVEDSPAGIQAAKAAGMRVVGV 185 (221)
T ss_pred HHHHHHcCCC-hHHeEEEecchhHHHHHHHCCCEEEEe
Confidence 6667776544 577888899999999999999876543
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.17 Score=51.72 Aligned_cols=90 Identities=22% Similarity=0.293 Sum_probs=59.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHH---HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNIN---TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~---ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++.-|++.+.++.+++.|++|+++|||+.. .+..=.++.|....+..++.+..-..- ....
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~~l~lr~~~~~~~----------------~~~~ 177 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWDHLILRPDKDPSK----------------KSAV 177 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBSCGEEEEESSTSS--------------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccchhcccccccccc----------------cccc
Confidence 355678999999999999999999999854 333345566765433333322211000 0012
Q ss_pred hcHHHHHHHHHhhcC-CEEEEEcCCccCHHH
Q 003127 563 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 592 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~m 592 (845)
+.|..-.+.+.++ | +.++.+||..+|..-
T Consensus 178 ~yK~~~r~~i~~~-Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 178 EYKSERRKEIEKK-GYRIIANIGDQLSDFSG 207 (229)
T ss_dssp --SHHHHHHHHHT-TEEEEEEEESSGGGCHC
T ss_pred ccchHHHHHHHHc-CCcEEEEeCCCHHHhhc
Confidence 3478888888877 6 578899999999775
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=92.14 E-value=0.54 Score=45.14 Aligned_cols=90 Identities=18% Similarity=0.157 Sum_probs=68.2
Q ss_pred cCCCChhHHHHHHHHHHcCCE--EEEEcCC-------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 485 KDPMRPGVKESVAICRSAGIT--VRMVTGD-------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~--v~~~TGd-------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
++++.++..+.+++|++.+.. ++++|-. +...|..+.+.+|+.. .
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------l 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------L 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE--------------------------E
Confidence 677899999999999999874 9999987 4889999999999862 0
Q ss_pred EEEEeChhcHHHHHHHHHhh----cCCEEEEEcCC-ccCHHHHHhCC-eeE
Q 003127 556 VMARSSPMDKHTLVKHLRTT----LGEVVAVTGDG-TNDAPALHEAD-IGL 600 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~----~g~~v~~~GDg-~ND~~ml~~A~-vgI 600 (845)
.+....|....++.+.++.+ ..+.++++||- ..|+-|=...| .+|
T Consensus 111 ~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~ti 161 (168)
T PF09419_consen 111 RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTI 161 (168)
T ss_pred EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEE
Confidence 12234676667888888654 14679999998 45777766665 444
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=92.10 E-value=0.84 Score=47.16 Aligned_cols=88 Identities=20% Similarity=0.283 Sum_probs=55.9
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~----ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
+.|.-|++.+..+.+++.|++|+++|||... |..++ ++.|......+++.+..-. -...
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~~LiLR~~~D~----------------~~~~ 205 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWEKLILKDPQDN----------------SAEN 205 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcceeeecCCCCC----------------ccch
Confidence 4567789999999999999999999999854 33333 3457754333333221000 0001
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCH
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDA 590 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~ 590 (845)
..+.|...-+.+.+. | ++++.+||..+|.
T Consensus 206 av~yKs~~R~~li~e-GYrIv~~iGDq~sDl 235 (275)
T TIGR01680 206 AVEYKTAARAKLIQE-GYNIVGIIGDQWNDL 235 (275)
T ss_pred hHHHHHHHHHHHHHc-CceEEEEECCCHHhc
Confidence 113465555666656 6 5788999999996
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.90 E-value=0.42 Score=45.04 Aligned_cols=87 Identities=20% Similarity=0.291 Sum_probs=57.6
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNIN----TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~----ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
+++-+++.|..=++.|=+++.+|||... ++..+|+...|.+.+.....|+.- +...-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gdk~-------------------k~~qy 175 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGDKP-------------------KPGQY 175 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccCCC-------------------Ccccc
Confidence 3445588888888999999999999864 456667777776654443333211 11112
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v 598 (845)
+|. ..++++ +-.+.. ||+.||+.+-+.||+
T Consensus 176 ~Kt---~~i~~~-~~~IhY-GDSD~Di~AAkeaG~ 205 (237)
T COG3700 176 TKT---QWIQDK-NIRIHY-GDSDNDITAAKEAGA 205 (237)
T ss_pred ccc---HHHHhc-CceEEe-cCCchhhhHHHhcCc
Confidence 343 345555 545555 999999999999875
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.23 E-value=2.8 Score=43.56 Aligned_cols=119 Identities=18% Similarity=0.232 Sum_probs=76.7
Q ss_pred cCCCChhHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCC--ccCCceee---eCcccccCCHHH-----------H
Q 003127 485 KDPMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI--LTDNGIAI---EGPEFREKSDEE-----------L 547 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~lgi--~~~~~~~i---~g~~~~~~~~~~-----------~ 547 (845)
...+.++..+++++|... ...++++|||+.........-.|+ ...++..+ +|.......++. +
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l 117 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAIL 117 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHH
Confidence 456888999999999887 557999999999998887763333 33333222 332221111000 0
Q ss_pred ------------------------------------hhh------------cCCeeEEEEeChhcHHHHHHHHHhhcCC-
Q 003127 548 ------------------------------------SKL------------IPKIQVMARSSPMDKHTLVKHLRTTLGE- 578 (845)
Q Consensus 548 ------------------------------------~~~------------~~~~~v~~~~~p~~K~~~v~~l~~~~g~- 578 (845)
.+. ..+..|-+|.+-..|+.+++.+.+..+.
T Consensus 118 ~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~ 197 (266)
T COG1877 118 EYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFD 197 (266)
T ss_pred HHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCC
Confidence 000 0122355666667799999987776453
Q ss_pred --EEEEEcCCccCHHHHHhCC----eeEEeC
Q 003127 579 --VVAVTGDGTNDAPALHEAD----IGLAMG 603 (845)
Q Consensus 579 --~v~~~GDg~ND~~ml~~A~----vgIamg 603 (845)
.+.+.||...|-.|++..+ .+|-+|
T Consensus 198 ~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 198 GRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred CCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 4778899999999999886 455555
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=90.87 E-value=0.61 Score=48.67 Aligned_cols=53 Identities=15% Similarity=0.170 Sum_probs=45.2
Q ss_pred CC-hhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc
Q 003127 488 MR-PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540 (845)
Q Consensus 488 l~-~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~ 540 (845)
+| |++.+++++|+++|++++++|+.....+....+++|+...-..++++.+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~ 199 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA 199 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc
Confidence 45 999999999999999999999999999999999999986545566555543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.27 E-value=0.74 Score=47.54 Aligned_cols=92 Identities=13% Similarity=0.110 Sum_probs=56.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh--hc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--MD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~~ 564 (845)
++-|++.++++.|++. +++.++|..+.. .+..|+...-..++..++. .+..| +-
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~~~------------------~~~KP~p~~ 168 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAGPH------------------GRSKPFSDM 168 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecccC------------------CcCCCcHHH
Confidence 4678999999999875 899999986653 2556664321122211111 01122 11
Q ss_pred HHHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeEEeC
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAMG 603 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgIamg 603 (845)
=..+++.+.-. .+.+++|||+ ..|+.+-+.||+-.+..
T Consensus 169 ~~~a~~~~~~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v 207 (238)
T PRK10748 169 YHLAAEKLNVP-IGEILHVGDDLTTDVAGAIRCGMQACWI 207 (238)
T ss_pred HHHHHHHcCCC-hhHEEEEcCCcHHHHHHHHHCCCeEEEE
Confidence 12223333222 3679999999 59999999999876644
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=89.75 E-value=3.5 Score=43.68 Aligned_cols=93 Identities=20% Similarity=0.227 Sum_probs=58.3
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAK---AIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~---~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
|++.-.+++-+++.++|++|+++|++++++|+++..+.. .-.+++|+...... +
T Consensus 11 Gtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~-----------------------i 67 (279)
T TIGR01452 11 GVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQ-----------------------L 67 (279)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhh-----------------------E
Confidence 455556777888999999999999999999997644333 34456777532111 2
Q ss_pred EEEeChhcHHHHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 557 MARSSPMDKHTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~--~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
+. + -....+.|+++ .+..+.++|+. .....++.+|+-+.
T Consensus 68 ~t---s--~~~~~~~l~~~~~~~~~v~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 68 FS---S--ALCAARLLRQPPDAPKAVYVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred ec---H--HHHHHHHHHhhCcCCCEEEEEcCH-HHHHHHHHCCCEEe
Confidence 21 1 11122334431 24678888975 45567777776653
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=88.29 E-value=2.3 Score=48.74 Aligned_cols=98 Identities=13% Similarity=0.062 Sum_probs=62.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE------e
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR------S 560 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~------~ 560 (845)
+++++.+ .+++.|.+ +++|+-...-++.+|++ +|++. ++ |.+++... +-....+ +
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI-gTeLev~~---------~G~~TG~i~g~~~c 172 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL-GTELEVSK---------SGRATGFMKKPGVL 172 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE-ecccEECc---------CCEEeeeecCCCCC
Confidence 5555444 45567755 99999999999999987 89873 11 11111100 0011112 2
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCC
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 604 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~ 604 (845)
.-++|.+-++..... .....+.||+.||.|||+.||.+.+++.
T Consensus 173 ~Ge~Kv~rl~~~~g~-~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 173 VGDHKRDAVLKEFGD-ALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred ccHHHHHHHHHHhCC-CCceEEEECCccHHHHHHhCCccEEeCC
Confidence 346687777643211 1122567999999999999999999983
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=87.39 E-value=1.5 Score=45.89 Aligned_cols=51 Identities=18% Similarity=0.079 Sum_probs=42.7
Q ss_pred ChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccc
Q 003127 489 RPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEF 539 (845)
Q Consensus 489 ~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~ 539 (845)
.|++.+++++|+++|+++.++|+.+...+....+.+|+...-..++.++..
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i 200 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRK 200 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCc
Confidence 399999999999999999999988888899999999997654455555443
|
|
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.10 E-value=1.9 Score=43.99 Aligned_cols=122 Identities=16% Similarity=0.178 Sum_probs=74.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH-
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K- 565 (845)
++.+++.++++++++. ++++++|--.........+++|+...-+.++...+ .....|..+
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~~------------------~g~~KP~~~~ 159 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISED------------------VGVAKPDPEI 159 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEecc------------------cccCCCCcHH
Confidence 5778999999999999 99999999888889999999997654332222111 112233222
Q ss_pred -HHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeE-EeCCCCc--HHHHhccCEEeccCChhHHHHHH
Q 003127 566 -HTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGL-AMGIAGT--EVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 566 -~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgI-amg~~~~--~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
..+.+.+.-. .+.++++||+ .||+..-+++|.-- -+...+. +......|+.+.+ +..+..++
T Consensus 160 f~~~~~~~g~~-p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~--l~~l~~~~ 226 (229)
T COG1011 160 FEYALEKLGVP-PEEALFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISS--LAELLDLL 226 (229)
T ss_pred HHHHHHHcCCC-cceEEEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcC--HHHHHHHH
Confidence 3334444333 4689999997 56757777777753 2331111 1112456666644 55555544
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=86.56 E-value=0.86 Score=41.59 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=28.7
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTA 517 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta 517 (845)
+++.+++.+++++++++|++++++|||+....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~ 54 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTY 54 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhh
Confidence 56889999999999999999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=85.70 E-value=2.6 Score=48.51 Aligned_cols=40 Identities=18% Similarity=0.292 Sum_probs=33.4
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHHcCCc
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNI------------NTAKAIARECGIL 527 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~------------~ta~~ia~~lgi~ 527 (845)
+-|++.+++++|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 468999999999999999999998654 3467778888874
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=84.41 E-value=3.7 Score=39.59 Aligned_cols=98 Identities=16% Similarity=0.255 Sum_probs=58.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcC-CCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTG-DNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TG-d~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+-|+++++++.|++.|+++.++|- +.+.-|+.+.+.+++...+..... +. +.--+....|..|
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~-----------~~----~~F~~~eI~~gsK 109 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVP-----------LI----EYFDYLEIYPGSK 109 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-------------------------CCECEEEESSS-H
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCcccccccc-----------ch----hhcchhheecCch
Confidence 4779999999999999999999994 778999999999999821110000 00 1112245567789
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..-.+.++++.| +.++++=|-.......++ +||.
T Consensus 110 ~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~--lGV~ 146 (169)
T PF12689_consen 110 TTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK--LGVT 146 (169)
T ss_dssp HHHHHHHHHHH---GGGEEEEES-HHHHHHHHT--TT-E
T ss_pred HHHHHHHHHhcCCChhHEEEecCchhcceeeEe--cCcE
Confidence 888888887755 567777777665565554 5554
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=82.84 E-value=7.4 Score=37.88 Aligned_cols=87 Identities=21% Similarity=0.200 Sum_probs=55.0
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCC-----HHHHHHH----------HHHcCCccCCceeeeCcccccCCHHHHhhhcC
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDN-----INTAKAI----------ARECGILTDNGIAIEGPEFREKSDEELSKLIP 552 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~-----~~ta~~i----------a~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~ 552 (845)
+.+++.+++++++++|++++|+|--+ +.+...+ .++.|..- .
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~i-----------------------d 88 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVKI-----------------------D 88 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCcc-----------------------c
Confidence 67899999999999999999999632 2222222 11222110 0
Q ss_pred CeeEEEE--------eChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCee
Q 003127 553 KIQVMAR--------SSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 553 ~~~v~~~--------~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vg 599 (845)
...+|. +..-..+.+.+.+++. + ....+|||...|+.+-..|+++
T Consensus 89 -~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~-~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 89 -GILYCPHHPEDNCDCRKPKPGMLLSALKEY-NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred -eEEECCCCCCCCCcccCCChHHHHHHHHHh-CCCccceEEecCcHHHHHHHHHCCCC
Confidence 012222 2222345555555554 5 6788999999999999988876
|
|
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=81.46 E-value=1 Score=43.85 Aligned_cols=86 Identities=13% Similarity=0.110 Sum_probs=54.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++ ++.++|.-+........+.+|+...-..++++++.. ..+.+|+-=.
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~~~~----------------~~KP~p~~f~ 146 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVDTVR----------------AYKPDPVVYE 146 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHhhcC----------------CCCCCHHHHH
Confidence 47789989888 378999999998998999999864222222222110 0112222224
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhC
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEA 596 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A 596 (845)
.+.+.+... .+.+++|||+..|+.+-+++
T Consensus 147 ~~~~~~~~~-p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 147 LVFDTVGLP-PDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHCCC-HHHeEeEecChhhHHHHhcC
Confidence 445555433 46799999999999876653
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=81.35 E-value=8.7 Score=38.17 Aligned_cols=152 Identities=11% Similarity=0.084 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHHHhhchhhhheeeecCCC-CCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCH
Q 003127 436 VNHLNETIEKFASEALRTLCLACMEIGNE-FSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNI 514 (845)
Q Consensus 436 ~~~~~~~~~~~~~~G~r~l~~a~~~i~~~-~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~ 514 (845)
.+......+.+.+.|.|++++-...---. -+........+ ...+-..++|+.++-+++|+++||+++++|=-..
T Consensus 28 ~~~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~-----~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 28 HESADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDND-----DIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcc-----hhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 34456677888999998876642100000 00000000000 0111224799999999999999999999997665
Q ss_pred HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEE------------------EEeChhcHHHHHHHHHhhc
Q 003127 515 NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVM------------------ARSSPMDKHTLVKHLRTTL 576 (845)
Q Consensus 515 ~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~------------------~~~~p~~K~~~v~~l~~~~ 576 (845)
.... . ......|+|.++-+..-+.-..-..-..++ ....|+.|..-.+.+.+++
T Consensus 103 ~~~~---~-----~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~~ 174 (219)
T PTZ00445 103 ELIP---S-----ENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSDF 174 (219)
T ss_pred hhcc---c-----cCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHHc
Confidence 4410 0 122244555543221110000000000011 1224455555445555554
Q ss_pred C---CEEEEEcCCccCHHHHHhCCeeE
Q 003127 577 G---EVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 577 g---~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
| +.++++=|....+.+-++.|+--
T Consensus 175 gl~peE~LFIDD~~~NVeaA~~lGi~a 201 (219)
T PTZ00445 175 NVNPDEILFIDDDMNNCKNALKEGYIA 201 (219)
T ss_pred CCCHHHeEeecCCHHHHHHHHHCCCEE
Confidence 5 67999999999999998877643
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=80.11 E-value=1.4 Score=42.45 Aligned_cols=94 Identities=12% Similarity=0.011 Sum_probs=62.3
Q ss_pred ecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
+.=..||++.+.+++|.+. +++++.|......|..+.+.++..... ..++..+. ..
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~----------------------~~ 95 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRES----------------------CV 95 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccc----------------------cE
Confidence 3346899999999999987 999999999999999999999864310 11111110 00
Q ss_pred hcHHHHHHHHH---hhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 563 MDKHTLVKHLR---TTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 563 ~~K~~~v~~l~---~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..|...++.|. .. .+.++++||...|..+-+.+++-|.
T Consensus 96 ~~~~~~~K~L~~l~~~-~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 96 FTNGKYVKDLSLVGKD-LSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred EeCCCEEeEchhcCCC-hhhEEEEeCChhhhccCccCEeecC
Confidence 01111233333 22 3578999999998877776766553
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 845 | ||||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-76 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 7e-76 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-75 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-75 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-75 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-75 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-74 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 9e-72 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-39 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 5e-36 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 6e-17 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 7e-17 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 6e-16 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 3e-15 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 4e-15 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 8e-15 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-14 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 3e-14 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-09 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 4e-05 | ||
| 2iye_A | 263 | Structure Of Catalytic Cpx-atpase Domain Copb-b Len | 3e-04 | ||
| 2yj3_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-04 | ||
| 2yj4_A | 263 | Conformational Changes In The Catalytic Domain Of T | 3e-04 | ||
| 2kij_A | 124 | Solution Structure Of The Actuator Domain Of The Co | 7e-04 |
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|2IYE|A Chain A, Structure Of Catalytic Cpx-atpase Domain Copb-b Length = 263 | Back alignment and structure |
|
| >pdb|2YJ3|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2YJ4|A Chain A, Conformational Changes In The Catalytic Domain Of The Cpx- Atpase Copb-B Upon Nucleotide Binding Length = 263 | Back alignment and structure |
|
| >pdb|2KIJ|A Chain A, Solution Structure Of The Actuator Domain Of The Copper- Transporting Atpase Atp7a Length = 124 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 845 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-174 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 1e-168 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 8e-42 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 8e-41 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 5e-33 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 3e-32 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 1e-30 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-28 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-13 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 9e-23 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 1e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-07 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 4e-09 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 4e-07 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 4e-06 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 7e-06 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 7e-06 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 2e-05 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 3e-05 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 7e-05 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 8e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 2e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 2e-04 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 2e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 2e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 2e-04 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 4e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 5e-04 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 5e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 6e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 649 bits (1676), Expect = 0.0
Identities = 243/939 (25%), Positives = 395/939 (42%), Gaps = 129/939 (13%)
Query: 4 MILAVCALVSLVVGI---ATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ 54
++ V A + L+ + + L + ++ VV VT Y Q +
Sbjct: 112 CLMWVAAAICLIAFAIQASEGDLTTDDNLYLALA--LIAVVVVTGCFGYYQEFKSTNIIA 169
Query: 55 -FKDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINE 113
FK+L ++ V R+G + +I+ L+ GD+V + GD+VPAD + ++
Sbjct: 170 SFKNLVPQQ----ATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDN 225
Query: 114 SSLTGESEPV--NVNALNPFLL-------SGTKVQNGSCKMLVTTVGMRTQWGKLMATLS 164
SSLTGESEP + + L T G+ + LV G RT G++ + S
Sbjct: 226 SSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASLAS 285
Query: 165 EGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEI 224
+++TP+ +++ II + + F F V + G L
Sbjct: 286 GVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAM---------------CIGYTFLRA 330
Query: 225 LEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK 284
+ F + IVV VPEGL VT+ L+ K++ + +V++L A ET+GS + ICSDK
Sbjct: 331 MVF---FMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDK 387
Query: 285 TGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQ-------SIFNNTG 337
TGTLT N MTV I D ++ + + L + + F +
Sbjct: 388 TGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQ 447
Query: 338 GEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIE 397
V + + ++G +ETA+L+F L G+ R+ V PFNS K +
Sbjct: 448 DAVPVPKR---IVIGDASETALLKFSELTLGNAMGYRERFPKVCEIPFNSTNKFQLSIHT 504
Query: 398 LPE---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTL 454
L + + KGA E +L C L G+ +PL+E R L
Sbjct: 505 LEDPRDPRHVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVL 563
Query: 455 CLACMEI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITV 506
+ + G F +A PT G + G+V + DP R V ++V CR+AGI V
Sbjct: 564 GFCQLYLSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRV 623
Query: 507 RMVTGDNINTAKAIARECGILTDNG------------------------IAIEGPEFREK 542
MVTGD+ TAKAIA GI+++ I G + ++
Sbjct: 624 IMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDM 683
Query: 543 SDEELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600
EL + + V AR+SP K +V+ + LG +VAVTGDG ND+PAL +ADIG+
Sbjct: 684 DPSELVEALRTHPEMVFARTSPQQKLVIVESCQR-LGAIVAVTGDGVNDSPALKKADIGV 742
Query: 601 AMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660
AMGIAG++ AK +AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ L
Sbjct: 743 AMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLI 802
Query: 661 SACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISN--VMWR 718
++ PL + +L++ + D +++LA E D+M P K + + N +
Sbjct: 803 YITVSVPLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAY 862
Query: 719 NILGQSLYQ-----FLIIWYLQTRGKAVFRLDGPDPDLILN------------------- 754
+ Q + G G P +
Sbjct: 863 SYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRL 922
Query: 755 -------TLIFNTFVFCQVFNEISSREMEKINVFKGILKN-YVFVAVLTCTVLFQIIIIE 806
T+ F + CQ+ + + + +G +N + +A++ + +
Sbjct: 923 YQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCI-GCFLCY 981
Query: 807 L--LGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843
+ N P+ Q W V + G L + KL
Sbjct: 982 CPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGV 1020
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 643 bits (1660), Expect = 0.0
Identities = 257/935 (27%), Positives = 398/935 (42%), Gaps = 123/935 (13%)
Query: 3 LMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-------F 55
L I A+ ++ + ATE P + LG+V + VV VT Y Q + F
Sbjct: 109 LWIGAILCFLAYGIQAATEDEPANDNLYLGVV--LSTVVIVTGCFSYYQEAKSSRIMDSF 166
Query: 56 KDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESS 115
K++ ++ V R+G + I+ ++ GD+V + GD++PAD +S ++ SS
Sbjct: 167 KNMVPQQ----ALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSS 222
Query: 116 LTGESEPV--NVNAL--NPF-----LLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 166
LTGESEP + NP T G+ + +V G RT G++ S
Sbjct: 223 LTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLASGL 282
Query: 167 GDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILE 226
TP+ +++ II + +F V F + + G LE +
Sbjct: 283 EVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL---------------ILGYSWLEAVI 327
Query: 227 FFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTG 286
F + I+V VPEGL VT+ L K+M LV++L A ET+GS ++ICSDKTG
Sbjct: 328 F---LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 384
Query: 287 TLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIF--NNTGGEVVIGE 344
TLT N MTV +I E D ++ ++ L + N G+
Sbjct: 385 TLTQNRMTVAHMWFDNQIHEADTTENQSGAAFDKTSATWSALSRIAALCNRA--VFQAGQ 442
Query: 345 GN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP- 399
N K + G +E+A+L+ L G Q R + + PFNS K + E
Sbjct: 443 DNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEIPFNSTNKYQLSIHENEK 502
Query: 400 --EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLA 457
E + + KGA E IL C L NG PL E + R L
Sbjct: 503 SSESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFC 561
Query: 458 CMEI-------GNEFSADAP-IPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMV 509
+ G F AD P PT +G++ + DP R V ++V CRSAGI V MV
Sbjct: 562 HFALPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMV 621
Query: 510 TGDNINTAKAIARECGILTDNG------------------------IAIEGPEFREKSDE 545
TGD+ TAKAIA+ GI+++ + G + ++ S E
Sbjct: 622 TGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTE 681
Query: 546 ELSKLIPKIQ--VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603
L ++ V AR+SP K +V+ + G +VAVTGDG ND+PAL +ADIG+AMG
Sbjct: 682 VLDDILHYHTEIVFARTSPQQKLIIVEGCQR-QGAIVAVTGDGVNDSPALKKADIGVAMG 740
Query: 604 IAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSAC 663
I+G++V+K++AD+I+LDDNF++IVT + GR ++ N++K + + LT N+ +
Sbjct: 741 ISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFII 800
Query: 664 LTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISN--VMWRNIL 721
PL V +L +++ D + A++LA E D+MKR P K + + N ++
Sbjct: 801 GNVPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYG 860
Query: 722 GQSLYQ-----FLIIWYLQTRGKAVFRL--------DGPDPDLILN-------------- 754
+ Q F L G L D D+ +
Sbjct: 861 QIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVE 920
Query: 755 ----TLIFNTFVFCQVFNEISSREMEKINVFKGILKN-YVFVAVLTCTVLFQIII-IELL 808
T F + V Q + I + + ++F+ +KN + + T L +
Sbjct: 921 FTCHTSFFISIVVVQWADLIICKT-RRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGT 979
Query: 809 GTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843
PL WF + + + + I
Sbjct: 980 DVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFII 1014
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 610 bits (1574), Expect = 0.0
Identities = 249/945 (26%), Positives = 403/945 (42%), Gaps = 124/945 (13%)
Query: 4 MILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQ------SLQ-FK 56
IL + A +S V+ EG V ILL++ A Q +++ K
Sbjct: 64 RILLLAACISFVLAWFEEGEETITAFVEPFV--ILLILIANAIVGVWQERNAENAIEALK 121
Query: 57 DLDREKKKITVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADG--LFVSGFSVLIN 112
+ + E +V R + ++I D++PGDIV + +GD+VPAD L + ++ ++
Sbjct: 122 EYEPE----MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVD 177
Query: 113 ESSLTGESEPV--NVNALNP----------FLLSGTKVQNGSCKMLVTTVGMRTQWGKLM 160
+S LTGES V + + L SGT + G +V T G+ T+ GK+
Sbjct: 178 QSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIR 237
Query: 161 ATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDD 220
++ D+TPLQ KL+ + K+ V + + + G
Sbjct: 238 DQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLI---NIGH-----FNDPVHGGSW 289
Query: 221 ALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSI 280
+ +F IAV + V A+PEGLP +T LA ++M A+VR L + ET+G + I
Sbjct: 290 IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVI 349
Query: 281 CSDKTGTLTTNHMTVLKACICEEIKEVDNSK-------------------GTPAFGSSIP 321
CSDKTGTLTTN M+V K I +++ S P
Sbjct: 350 CSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFD 409
Query: 322 ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVK 381
+L N E +G TETA+ + R SK+ +
Sbjct: 410 G-LVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVER 468
Query: 382 VE----------------PFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDK 420
F+ +K M V + G ++ KGA E ++ C+
Sbjct: 469 ANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNY 528
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY-- 476
VP+ + I+++ + LR L LA + + + +
Sbjct: 529 VR-VGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFME 587
Query: 477 -----TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN- 530
T +G+VG+ DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 588 YETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENE 647
Query: 531 ---GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGT 587
A G EF + E + + AR P K +V++L+ + E+ A+TGDG
Sbjct: 648 EVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQ-SYDEITAMTGDGV 706
Query: 588 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQ 647
NDAPAL +A+IG+AMG +GT VAK ++++++ DDNFSTIV + GR++Y N+++F+++
Sbjct: 707 NDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYL 765
Query: 648 LTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGR 707
++ NV ++ F +A L L VQLLWVN++ D L A AL PP+ D+M R P
Sbjct: 766 ISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSP 825
Query: 708 KGNFISNVMWRNILGQSLYQFLI------IWYLQTRGKAVFRLDGPDPDLILN------- 754
K IS ++ + Y W++ +
Sbjct: 826 KEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFE 885
Query: 755 -------------TLIFNTFVFCQVFNEISSREMEKINVFK-GILKN-YVFVAVLTCTVL 799
T+ + V ++ N ++S E ++ + N ++ ++ L
Sbjct: 886 GLDCEIFEAPEPMTMALSVLVTIEMCNALNSL-SENQSLMRMPPWVNIWLLGSICLSMSL 944
Query: 800 -FQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843
F I+ ++ L L+L QW + + + + + +LK I
Sbjct: 945 HFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIA 989
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 524 bits (1353), Expect = e-174
Identities = 155/849 (18%), Positives = 322/849 (37%), Gaps = 87/849 (10%)
Query: 4 MILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ-FKDLDREK 62
++ + A++++ + G + I+ ++ + +T + +
Sbjct: 71 WVMEMAAIMAIALANGD-----GRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALM 125
Query: 63 KKI--TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGES 120
+ +V R+G + L+PGDIV + +GD +PAD + G + +++S+LTGES
Sbjct: 126 AGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGES 185
Query: 121 EPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGV 180
PV + + SG+ + G + +V G+ T +GK A L + + Q L +
Sbjct: 186 LPVTKHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGK-AAHLVDSTNQVGHFQKVLTAI 243
Query: 181 ATI-IGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 239
I I + + + + ++ + +++ +
Sbjct: 244 GNFCICSIAIGMVIEIIVMYP---------------IQRRKYRDGIDN---LLVLLIGGI 285
Query: 240 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 299
P +P +++++A ++ A+ + + A E M +CSDKTGTLT N ++V K
Sbjct: 286 PIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNL 345
Query: 300 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 359
+ K V+ ++LL + ++ E + A+
Sbjct: 346 VEVFCKGVEK---------------DQVLLFAAMA-----------SRVEN-QDAIDAAM 378
Query: 360 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 419
+ D + R + V PFN V K+ + G + KGA E IL
Sbjct: 379 VGM----LADPKEARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELA- 433
Query: 420 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 479
+ + I+K+A LR+L +A + + P + +
Sbjct: 434 ----------KASNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKTKES---PGAPWEFV 480
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA---IEG 536
G++ + DP R E++ + G+ V+M+TGD + K R G+ T+ + +
Sbjct: 481 GLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGT 540
Query: 537 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 596
+ + + +LI K A P K+ +VK L+ +V +TGDG NDAPAL +A
Sbjct: 541 HKDANLASIPVEELIEKADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKA 599
Query: 597 DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALI 656
DIG+A+ T+ A+ ++D+++ + S I++ R+++ ++ + + +++ + ++
Sbjct: 600 DIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSIT-IRIV 657
Query: 657 VNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVM 716
F L +A +L + ++ D + ++ + S + + +
Sbjct: 658 FGFMLIALIWEFDFSAFMVLIIAILND-GTIMTISKDRVKPSPTPDSW--KLKEIFATGV 714
Query: 717 WRNILG--QSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSRE 774
++ F D + L ++ +R
Sbjct: 715 VLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQALIFVTR- 773
Query: 775 MEKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMP 834
+ F + +A L ++ +I + FA + V L +
Sbjct: 774 -SRSWSFVERPGALLMIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYF 832
Query: 835 IAAVLKLIQ 843
V K
Sbjct: 833 PLDVFKFAI 841
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 511 bits (1319), Expect = e-168
Identities = 165/847 (19%), Positives = 347/847 (40%), Gaps = 98/847 (11%)
Query: 1 MTLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDR 60
+ ++ A+++ + W D I +LL V +++ +L +
Sbjct: 124 IQFVMEGA-AVLAAGLE----DWV----DFGVICGLLLLNAVVGFVQEFQAGSIVDEL-K 173
Query: 61 EKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVL-INESSLTGE 119
+ + V R+G ++I +++PGDI+ + G +PADG V+ + L +++S+LTGE
Sbjct: 174 KTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGE 233
Query: 120 SEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNG 179
S V+ + + + + + V+ G +++T G T G+ A ++ LNG
Sbjct: 234 SLAVDKHKGDQ-VFASSAVKRGEAFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNG 292
Query: 180 VATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAV 239
+ TI+ + +F ++ + + + ++ILEF + I ++ V
Sbjct: 293 IGTILLILVIFTLLIVWVSSF---------------YRSNPIVQILEF---TLAITIIGV 334
Query: 240 PEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKAC 299
P GLP VT ++A + KA+V+ L+A E++ +CSDKTGTLT N +++
Sbjct: 335 PVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPY 394
Query: 300 ICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAI 359
+ D L+L + ++ + + A
Sbjct: 395 TVAGVDPED------------------LMLTACLAA----------SRKKKGIDAIDKAF 426
Query: 360 LEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACD 419
L+ L ++ K+++ PF+ V K++ V+E P+G KGA +L +
Sbjct: 427 LKS-LKYYPRAKSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVE 485
Query: 420 KFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCI 479
E P+ E + +FA+ R+L +A + +
Sbjct: 486 -------EDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRGEGSW-----------EIL 527
Query: 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGP 537
GI+ DP R ++V ++ G++++M+TGD + A+ +R+ G+ T+ N +
Sbjct: 528 GIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLG 587
Query: 538 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597
+ E+ + A P K+ +V+ L+ G +VA+TGDG NDAP+L +AD
Sbjct: 588 GGGDMPGSEVYDFVEAADGFAEVFPQHKYNVVEILQ-QRGYLVAMTGDGVNDAPSLKKAD 646
Query: 598 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIV 657
G+A+ ++ A+ +AD++ L I+ K R ++ + +V +++ ++ + L +
Sbjct: 647 TGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALS-IHLEI 704
Query: 658 NFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMW 717
N L ++++ + D + LA+A + + +
Sbjct: 705 FLGLWIAILNRSLNIELVVFIAIFAD-VATLAIAYDNAPYSQTPVKW---NLPKLWGMSV 760
Query: 718 RNILG--QSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEISSREM 775
+LG ++ ++ + + +G+ + ++ ++F + + +R
Sbjct: 761 --LLGVVLAVGTWITVTTMYAQGENGGIVQNFG---NMDEVLFLQISLTENWLIFITR-- 813
Query: 776 EKINVFKGILKNYVFVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPI 835
+ I + A+ +L + G F + ++ + F I
Sbjct: 814 ANGPFWSSIPSWQLSGAIFLVDIL--ATCFTIWGWFE-HSDTSIVAVVRIWIFSFGIFCI 870
Query: 836 AAVLKLI 842
+ I
Sbjct: 871 MGGVYYI 877
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 8e-42
Identities = 136/587 (23%), Positives = 220/587 (37%), Gaps = 152/587 (25%)
Query: 66 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 125
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 134 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY-VDESMISGEPVPVLK 192
Query: 126 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 185
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 193 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 251
Query: 186 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAI--AVTIVVVAVPEGL 243
L A+ F W + L FA + ++VVA P
Sbjct: 252 PTVLLVAISAFIY---------------WYFIAHAPLL----FAFTTLIAVLVVACPCAF 292
Query: 244 PLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEE 303
LA +L M K L+++ A E T++ DKTGTLT
Sbjct: 293 GLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLT-------------- 338
Query: 304 IKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT---------- 353
KG P +P G++ E+L
Sbjct: 339 -------KGKPEVTDLVPL---------------------NGDERELLRLAAIAERRSEH 370
Query: 354 PTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEI 413
P AI++ +A ++ + E + + GV ++
Sbjct: 371 PIAEAIVK---------KALEHGIELGEPEKVEVIAGE-GV---------------VADG 405
Query: 414 ILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPT 473
IL + + G V N + +EK EA + +A
Sbjct: 406 ILVGNKRLMEDFGVAVS------NEVELALEKLEREAKTAVIVA---RNGRV-------- 448
Query: 474 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIA 533
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 449 -----EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------- 496
Query: 534 IEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 593
D V+A P K VK L+ EVVA GDG NDAPAL
Sbjct: 497 ----------DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPAL 534
Query: 594 HEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 640
+AD+G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 535 AQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 580
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 8e-41
Identities = 128/583 (21%), Positives = 220/583 (37%), Gaps = 145/583 (24%)
Query: 69 VARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL 128
+ +G ++S+ ++ GD++ + G+++P DG G S ++ES +TGE PV A
Sbjct: 230 IKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGRSF-VDESMVTGEPIPVAKEAS 288
Query: 129 NPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIG 188
++ T Q GS M VG T +++ +S+ P+Q + V+
Sbjct: 289 AK-VIGATINQTGSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAV 347
Query: 189 LFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF-FAIAVTIVVVAVPEGLPLAV 247
+ AV++F V W G L + AV+++++A P L LA
Sbjct: 348 ILVAVLSFIV---------------WALLGPQP--ALSYGLIAAVSVLIIACPCALGLAT 390
Query: 248 TLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 307
+S+ + K L+++ A E M ++ DKTGTLT
Sbjct: 391 PMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLT------------------ 432
Query: 308 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGT----------PTET 357
+G P +V + + L P
Sbjct: 433 ---EGHPKLT---------------------RIVTDDFVEDNALALAAALEHQSEHPLAN 468
Query: 358 AILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAA 417
AI+ A+ + + VE F + G V + +
Sbjct: 469 AIVHA---------AKEKGLSLGSVEAFEAPT------------GKGVVGQVDGHHVAIG 507
Query: 418 CDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYT 477
+ + +G L E ++ + + +A + +
Sbjct: 508 NARLMQEHG-------GDNAPLFEKADELRGKGASVMFMA---VDGKT------------ 545
Query: 478 CIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP 537
+ ++ ++DP++ E++ + +GI + M+TGD+ TA+A+A GI
Sbjct: 546 -VALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI----------- 593
Query: 538 EFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD 597
+ V+A P DK +V L+ G +VA+ GDG NDAPAL +AD
Sbjct: 594 ------KK----------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKAD 636
Query: 598 IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 640
IG+AMG GT+VA ESA V +L + I + S NI
Sbjct: 637 IGIAMG-TGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNI 678
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 5e-33
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 29/162 (17%)
Query: 479 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538
I I D RP +K+ + ++ G+ + +++GD + K +++E I
Sbjct: 128 IASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI------------ 175
Query: 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598
E + SP DK +++ L+ G V + GDG NDA AL AD+
Sbjct: 176 -----QE----------YYSNLSPEDKVRIIEKLKQN-GNKVLMIGDGVNDAAALALADV 219
Query: 599 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 640
+AMG G +++K AD+I++ ++ T++ + K + + I
Sbjct: 220 SVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAI 260
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 3e-32
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 30/162 (18%)
Query: 479 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538
G++ + D +RP +E+++ ++ GI M+TGDN AK +A E G+
Sbjct: 136 SGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL------------ 183
Query: 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598
D+ A P +K VK ++ V A+ GDG NDAPAL +AD+
Sbjct: 184 -----DD----------YFAEVLPHEKAEKVKEVQQ--KYVTAMVGDGVNDAPALAQADV 226
Query: 599 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 640
G+A+G AGT+VA E+AD++++ ++ + + + R Y
Sbjct: 227 GIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKF 267
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 1e-30
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 479 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 155 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 202
Query: 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 203 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 245
Query: 599 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 640
G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 246 GIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 286
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-28
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 30/162 (18%)
Query: 479 IGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPE 538
GI+ + D ++ K +V + GI V M+TGDN +A+AI+RE +
Sbjct: 527 EGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL------------ 574
Query: 539 FREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI 598
D V+A P K VK L+ EVVA GDG NDAPAL +AD+
Sbjct: 575 -----DL----------VIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADL 617
Query: 599 GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINI 640
G+A+G +G++VA ES D++++ D+ +V + R I
Sbjct: 618 GIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKI 658
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 73.3 bits (181), Expect = 2e-13
Identities = 58/230 (25%), Positives = 95/230 (41%), Gaps = 19/230 (8%)
Query: 66 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 125
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 212 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 270
Query: 126 NALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIG 185
+ + + T G K+ T VG T +++ + + + P+Q + V
Sbjct: 271 SKGDE-VFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFI 329
Query: 186 KIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPEGLPL 245
L A+ F W + L F + ++VVA P L
Sbjct: 330 PTVLLVAISAFIY---------------WYFIAHAPLL--FAFTTLIAVLVVACPCAFGL 372
Query: 246 AVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTV 295
A +L M K L+++ A E T++ DKTGTLT V
Sbjct: 373 ATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEV 422
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 9e-23
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 7/139 (5%)
Query: 351 LGTPTETAILEFGLLLGGDFQAERQASKIVKVE--PFNSVKKQMGVVIELPEGGFRVHCK 408
L +TA+LE + A AS+ K++ PF+ +++M VV+ ++ CK
Sbjct: 32 LKNLLDTAVLEGT----DEESARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCK 87
Query: 409 GASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSAD 468
GA + IL C + + NGE+VPL++ + + + + LR + +A +
Sbjct: 88 GALQEILNVCSQVRH-NGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDY 146
Query: 469 APIPTEGYTCIGIVGIKDP 487
G + D
Sbjct: 147 QRADESDLILEGYIAFLDH 165
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 58.2 bits (142), Expect = 1e-10
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 66 TVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNV 125
T V R+G + + ++ GDIV + G+++P DG+ V G S ++ES ++GE PV
Sbjct: 13 TAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGES-YVDESMISGEPVPVLK 71
Query: 126 NALNPFLLSGTKVQNGSCKMLVTTVGMRT 154
+ + + T G K+ T VG T
Sbjct: 72 SKGDE-VFGATINNTGVLKIRATRVGGET 99
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.0 bits (147), Expect = 1e-09
Identities = 79/561 (14%), Positives = 157/561 (27%), Gaps = 195/561 (34%)
Query: 328 LLQSIFNNTGGEVVIGEGNKTEILGTPT--ETAILEFGLLLGGDFQAERQASKIVK--VE 383
+ +SI + E+ I+ + + F LL + ++V+ VE
Sbjct: 41 MPKSILSKE--EI-------DHIIMSKDAVSGTLRLFWTLL-------SKQEEMVQKFVE 84
Query: 384 PFNSVKKQMGVVIELPEGGFRVHCKGAS---EIILAACDKFLNSNGEVVPLNEAAVNHLN 440
++ ++ + + S + + D+ N N N V+ L
Sbjct: 85 --EVLRINYKFLMS----PIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN---VSRL- 134
Query: 441 ETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV-KESVAI- 498
+ K +AL L P + + I G + G K VA+
Sbjct: 135 QPYLKL-RQALLEL----------------RPAKN---VLIDG----V-LGSGKTWVALD 169
Query: 499 -CRSAGITVRM------VTGDNINTAKAIARE----CGILTDNGIA----IEGPEFR-EK 542
C S + +M + N N+ + + + N + + R
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS 229
Query: 543 SDEELSKLIP---------------------------KIQVMAR-SSPMD-------KHT 567
EL +L+ KI + R D H
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHI 289
Query: 568 LVKHLRTTLGE-----VVA-VTGDGTNDAPALHEADIG--LAMGIAGTEVAKESADVIIL 619
+ H TL ++ D P E + I +
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLP--REVLTTNPRRLSIIAES----------I 337
Query: 620 DDNFSTIVTVAKWGRSVYINIQKFVQ-FQLTVNV----------VALIVNF-SSACLTGN 667
D +T W ++N K + ++NV L V F SA +
Sbjct: 338 RDGLAT------WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV-FPPSA----H 386
Query: 668 APLTAVQLLWVNM-------IMDTLGALALATEPPNG------DL---MKRSPVGRKGNF 711
P + L+W ++ +++ L +L + P + +K
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEY--- 443
Query: 712 ISNVMWRNILGQSLYQFLIIWYLQTRGKAVFRLDGPDPDLILNTLIFNTFVFCQVFNEIS 771
+ R+I+ Y F D P + ++ +
Sbjct: 444 ---ALHRSIVDH--YNI----------PKTFDSDDLIPPYLDQ-YFYSHIGH-----HLK 482
Query: 772 SREM-EKINVFKGILKNYVFV 791
+ E E++ +F+ + ++ F+
Sbjct: 483 NIEHPERMTLFRMVFLDFRFL 503
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 53.7 bits (128), Expect = 3e-07
Identities = 72/488 (14%), Positives = 136/488 (27%), Gaps = 169/488 (34%)
Query: 38 LLVVFVTATSDYKQSLQFKDL---------DREKKKITVQVAR-NGFRRKISIYDLL--- 84
+L VF + + KD+ E I + +G R ++ L
Sbjct: 21 ILSVFE---DAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR---LFWTLLSK 74
Query: 85 PGDIVHLCMGDQVPAD-GLFVSGFSVLINESSLTGES---------------EPVNVNAL 128
++V + + + + +S + S+ NV+ L
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL 134
Query: 129 NPFLLSGTKVQNGSCKM----LVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATII 184
P+L K++ ++ V G+ G
Sbjct: 135 QPYL----KLRQALLELRPAKNVLIDGV-------------LG----------------S 161
Query: 185 GKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSG-----DDALEILEFFAIAVTIVVVAV 239
GK V V + K+ W + LE+L+ + +
Sbjct: 162 GK-----TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216
Query: 240 PEG---LPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVL 296
+ + L + S+ +++++ K L L VL
Sbjct: 217 SDHSSNIKLRIH-SIQAELRRLLKSKPYENCL-------------------L------VL 250
Query: 297 KACICEEIKEVDNSKGTPAFGSSIPASASKLLL----QSIFN----NTGGEVVIGEGNKT 348
V N+K AF S K+LL + + + T + + + T
Sbjct: 251 L--------NVQNAKAWNAFNLS-----CKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297
Query: 349 EILGTPTETAILEFGLLLGGDFQAE-RQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHC 407
TP E L L Q R+ P ++ ++ E R
Sbjct: 298 L---TPDEVKSL-LLKYLDCRPQDLPREVLTT---NPR-----RLSIIAES----IRDG- 340
Query: 408 KGASEIILAACDKFLNSNGE-VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFS 466
LA D + + N + + + E+++N L + + L + F
Sbjct: 341 -------LATWDNWKHVNCDKLTTIIESSLNVLEPAEYR---KMFDRLSV--------FP 382
Query: 467 ADAPIPTE 474
A IPT
Sbjct: 383 PSAHIPTI 390
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 4e-09
Identities = 20/144 (13%), Positives = 42/144 (29%), Gaps = 11/144 (7%)
Query: 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD---NGIAIEGPEFREKS 543
+R G +E VA I +++G + N + +
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHIDW 136
Query: 544 DEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603
+ K +++ L ++ + GD D A +D+ A
Sbjct: 137 PH------SCKGTCSNQCGCCKPSVIHELSEPNQYIIMI-GDSVTDVEAAKLSDLCFARD 189
Query: 604 IAGTEVAKESADVIILDDNFSTIV 627
E +++ + + D F I
Sbjct: 190 YLLNECREQNLNHLPYQD-FYEIR 212
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 48.7 bits (117), Expect = 4e-07
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 14/85 (16%)
Query: 76 RKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 135
++ + + GDI+ + G + P DG + G S +++ES +TGE+ PV G
Sbjct: 35 EQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPVAKKP-------G 86
Query: 136 TKV------QNGSCKMLVTTVGMRT 154
+ V QNGS + T VG T
Sbjct: 87 STVIAGSINQNGSLLICATHVGADT 111
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 4e-06
Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 19/145 (13%)
Query: 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 546
P+ G E V+ + V +G + D + ++
Sbjct: 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DAAFSNT----LIVENDA 128
Query: 547 LS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLA 601
L+ + + K ++ L+ L + V GDG ND A I +A
Sbjct: 129 LNGLVTGHMMFSHS-----KGEMLLVLQRLLNISKTNTLVV-GDGANDLSMFKHAHIKIA 182
Query: 602 MGIAGTEVAKESADVIILDDNFSTI 626
EV K+ A I + + + I
Sbjct: 183 FN--AKEVLKQHATHCINEPDLALI 205
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 47.8 bits (114), Expect = 7e-06
Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 25/148 (16%)
Query: 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 546
+ PG+ + + ++ G +++G + + + D + E D
Sbjct: 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DYAFSNT----VEIRDNV 232
Query: 547 LS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADI 598
L+ + I M+ + L ++A GDG ND P L A
Sbjct: 233 LTDNITLPI--------MNAANKKQTLVDLAARLNIATENIIAC-GDGANDLPMLEHAGT 283
Query: 599 GLAMGIAGTEVAKESADVIILDDNFSTI 626
G+A V +E I F +
Sbjct: 284 GIAWK--AKPVVREKIHHQINYHGFELL 309
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 7e-06
Identities = 39/156 (25%), Positives = 57/156 (36%), Gaps = 33/156 (21%)
Query: 492 VKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEF-------- 539
VK A C G+ V NI+ + L N I E
Sbjct: 90 VKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQ 149
Query: 540 -----REKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVA 581
E+ ++E+ IP ++ R P K +++H L E ++
Sbjct: 150 MTPFITEEEEKEVLPSIPTCEIG-RWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMS 208
Query: 582 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 617
GDG ND L A IG+AMG A +V K +AD +
Sbjct: 209 F-GDGGNDISMLRHAAIGVAMGQAKEDV-KAAADYV 242
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 2e-05
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 541 EKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVAVTGDGT 587
+ +E + P+ + + R + K +++ L +V A GDG
Sbjct: 152 AEEEEPYVRNYPEFRFV-RWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAF-GDGL 209
Query: 588 NDAPALHEADIGLAMGIAGTEVAKESADVI 617
ND L G+AMG A EV K AD +
Sbjct: 210 NDIEMLSFVGTGVAMGNAHEEV-KRVADFV 238
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 2e-05
Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 33/156 (21%)
Query: 492 VKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPE---------- 538
++S+ + R V + + + + + GI+ + E
Sbjct: 97 FRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQ 156
Query: 539 ----FREKSDEELSKLIPKIQVMARSSPM---------DKHT----LVKHLRTTLGEVVA 581
F E++++++ L+ + R P+ K T + R + E++A
Sbjct: 157 LCFYFDEEAEQKVMPLLSGLSAT-RWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMA 215
Query: 582 VTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 617
GDG ND P L A IG+AMG A +V + AD +
Sbjct: 216 C-GDGGNDIPMLKAAGIGVAMGNASEKV-QSVADFV 249
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 46.3 bits (110), Expect = 3e-05
Identities = 28/149 (18%), Positives = 55/149 (36%), Gaps = 27/149 (18%)
Query: 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 542
P+ P + E VA + G V + +G + + + + D N + I
Sbjct: 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSL--DYAQSNTLEIV------- 228
Query: 543 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 597
+L+ +++ ++ V A++ K ++ L VAV GDG ND + A
Sbjct: 229 -SGKLTGQVLGEV-VSAQT----KADILLTLAQQYDVEIHNTVAV-GDGANDLVMMAAAG 281
Query: 598 IGLAMGIAGTEVAKESADVIILDDNFSTI 626
+G+A + A + +
Sbjct: 282 LGVAYH--AKPKVEAKAQTAVRFAGLGGV 308
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 44.2 bits (105), Expect = 7e-05
Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 10/134 (7%)
Query: 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 549
PG++E V+ + + V +++G + + +A + I N A +F + E +
Sbjct: 89 PGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANR-LKFYF--NGEYAG 145
Query: 550 LIPKIQVMARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEADIGLAM-GIAG 606
K ++K L+ +++ + GDG D A AD + G
Sbjct: 146 FDETQPTAESGG---KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFGGNVI 201
Query: 607 TEVAKESADVIILD 620
+ K++A I D
Sbjct: 202 RQQVKDNAKWYITD 215
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 8e-05
Identities = 30/149 (20%), Positives = 60/149 (40%), Gaps = 27/149 (18%)
Query: 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NGIAIEGPEFREK 542
G +E++ ++ G V +V+G I + G+ D N + ++
Sbjct: 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGL--DYAFANRLIVK------- 126
Query: 543 SDEELS-KLIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEAD 597
D +L+ + ++ + + K +++ + G + VAV GDG ND +A
Sbjct: 127 -DGKLTGDVEGEV-LKENA----KGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAG 179
Query: 598 IGLAMGIAGTEVAKESADVIILDDNFSTI 626
+ +A + KE AD+ I + I
Sbjct: 180 LKIAFC--AKPILKEKADICIEKRDLREI 206
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 44.0 bits (104), Expect = 2e-04
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 29/150 (19%)
Query: 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSD 544
+ PG + ++ R G +V+G + +A E + N + I D
Sbjct: 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIV--------D 307
Query: 545 EELS-KLIPKIQVMARSSPMDKHTLVKHLRT-------TLGEVVAVTGDGTNDAPALHEA 596
L+ +++ I +D+ LR + + VAV GDG ND L A
Sbjct: 308 GTLTGRVVGPI--------IDRAGKATALREFAQRAGVPMAQTVAV-GDGANDIDMLAAA 358
Query: 597 DIGLAMGIAGTEVAKESADVIILDDNFSTI 626
+G+A +E AD + T+
Sbjct: 359 GLGIAF--NAKPALREVADASLSHPYLDTV 386
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 16/91 (17%), Positives = 26/91 (28%), Gaps = 15/91 (16%)
Query: 545 EELSKLIPKIQVMARSSPM---------DKHTLVKHLRTTLG----EVVAVTGDGTNDAP 591
+ + K + S DK V L+ E++ + GD ND P
Sbjct: 125 DYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVI-GDSNNDMP 183
Query: 592 ALHEADIGLAMGIAGTEVAKESADVIILDDN 622
A T+ K +D +
Sbjct: 184 MFQLPVRKACPANA-TDNIKAVSDFVSDYSY 213
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 2e-04
Identities = 26/140 (18%), Positives = 44/140 (31%), Gaps = 23/140 (16%)
Query: 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSK 549
G+KE V ++ G + + +G + + A I +N A+ E SD +
Sbjct: 85 DGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAV---ETIWNSDGSFKE 141
Query: 550 LIPKIQVMARSSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIA 605
L + + G EV+A+ GDG D E IA
Sbjct: 142 LDNSNGA--------CDSKLSAFDKAKGLIDGEVIAI-GDGYTDYQLY-EKGYATK-FIA 190
Query: 606 GTEV-----AKESADVIILD 620
E + + +
Sbjct: 191 YMEHIEREKVINLSKYVARN 210
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 42.9 bits (102), Expect = 2e-04
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 532 IAIEGPEFREKSDEELSKLIPKIQVMARSSP-----MDK--------HTLVKHLRTTLGE 578
+ I+ PE ++ E LS+ + + +S P + K L + + E
Sbjct: 149 LLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEE 208
Query: 579 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
+V GD ND EA + +AM A +V KE++D++ L +N
Sbjct: 209 IVVF-GDNENDLFMFEEAGLRVAMENAIEKV-KEASDIVTLTNN 250
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 42.5 bits (101), Expect = 2e-04
Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 17/98 (17%)
Query: 540 REKSDEELSKLIPKI--QVMARSSPM---------DKHTLVKHLRTTLG----EVVAVTG 584
+ E + ++I ++ ++A S +K + ++ LG EV V G
Sbjct: 118 ETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV-G 176
Query: 585 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
DG ND A +A+ A + KE+AD + +
Sbjct: 177 DGENDLDAFKVVGYKVAVAQAPKIL-KENADYVTKKEY 213
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 4e-04
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 30/120 (25%)
Query: 490 PGVKESVAICRSAGITVRMVTGDNINTAKAIARECGI--------LTDNGIAIEGPEFRE 541
G E V R V +++ ++ + R+ G D+ + G + R+
Sbjct: 72 EGAVEFVDWLR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQ 130
Query: 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601
K K V ++ V+A GD ND L EA G+
Sbjct: 131 KDP--------------------KRQSVIAFKSLYYRVIAA-GDSYNDTTMLSEAHAGIL 169
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 5e-04
Identities = 17/99 (17%), Positives = 31/99 (31%), Gaps = 22/99 (22%)
Query: 544 DEELSKLIPKIQ-------VMARSSPM---------DKHTLVKHLRTTLG----EVVAVT 583
E +I ++ + + DK+T + +L +V+ V
Sbjct: 188 PSESKTVIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVV- 246
Query: 584 GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
GD ND L A+ A K A ++ +
Sbjct: 247 GDAENDIAMLSNFKYSFAVANATDSA-KSHAKCVLPVSH 284
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} Length = 290 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 5e-04
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 532 IAIEGPEFREKSDEELSKLIPKIQVMARSSP-----MDK--------HTLVKHLRTTLGE 578
+ + E ++K P + V+ R + + K + L ++ +
Sbjct: 162 EVYTEHDIQHDITETITKAFPAVDVI-RVNDEKLNIVPKGVSKEAGLALVASELGLSMDD 220
Query: 579 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620
VVA+ G +D P + A +G+AMG A E+ K AD +
Sbjct: 221 VVAI-GHQYDDLPMIELAGLGVAMGNAVPEI-KRKADWVTRS 260
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 41.8 bits (99), Expect = 6e-04
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 15/104 (14%)
Query: 532 IAIEGPEFREKSDEELSKLIPKIQVMARSSPM---------DK----HTLVKHLRTTLGE 578
+ ++ P+ E+ + + + +S+P K LV L T +
Sbjct: 156 MFVDYPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADD 215
Query: 579 VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
V+ + GD ND + A +G+AMG A EV KE+A + L +
Sbjct: 216 VMTL-GDQGNDLTMIKYAGLGVAMGNAIDEV-KEAAQAVTLTNA 257
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 845 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.91 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.93 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.92 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.9 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.9 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.81 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.76 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.47 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.46 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.42 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.4 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.39 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.38 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.38 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.37 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.35 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.34 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.33 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.32 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.31 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.3 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.28 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.24 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.22 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.2 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.2 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.2 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.16 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.11 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.1 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.09 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.09 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.04 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.02 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.01 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.0 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.97 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.97 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.97 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.96 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.92 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.88 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.86 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.85 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.82 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.79 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.77 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.73 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.68 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 98.68 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.64 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.63 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.63 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.61 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.58 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.58 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.56 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.51 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.5 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.48 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.48 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.47 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.45 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.44 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.42 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.41 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.38 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.38 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.37 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.35 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.34 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.34 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.34 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.33 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.33 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.31 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.3 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.29 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.28 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.26 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.25 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.23 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.23 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.23 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.23 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.22 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.19 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.19 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.18 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.18 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.16 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 98.15 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.15 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.14 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.14 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.11 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.11 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.1 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.1 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.09 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 98.04 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.98 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.98 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.95 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.94 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.84 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.82 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.81 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.78 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.7 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.7 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.67 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.62 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.61 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.57 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 97.5 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.48 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.48 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.44 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.42 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.34 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 97.26 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 97.23 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 97.16 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.06 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 97.06 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.93 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 96.92 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.83 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.66 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.64 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.41 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.34 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.32 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.25 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.15 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 96.05 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.66 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 94.86 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 93.91 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 93.89 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 93.73 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 91.73 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 90.78 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 90.64 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 90.55 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 89.16 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 87.2 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 85.37 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 85.05 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 84.46 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 81.73 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-122 Score=1134.91 Aligned_cols=820 Identities=28% Similarity=0.406 Sum_probs=683.6
Q ss_pred hHHHHHHHHHHHHHHhhccc---CC--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEE
Q 003127 2 TLMILAVCALVSLVVGIATE---GW--PKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRR 76 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~---~~--~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~ 76 (845)
+.++|+++|+++++.+.... .+ ...|.+++.+++.+++..++..+++++.++..+++.+ ..+.+++|+|||+++
T Consensus 110 ~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~-l~~~~a~ViRdG~~~ 188 (1034)
T 3ixz_A 110 LQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKN-LVPQQATVIRDGDKF 188 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhc-cCCCeeEEEECCEEE
Confidence 45788889999988753321 11 1134555544444444444444555555555555544 345689999999999
Q ss_pred EEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCC---------CCeEEeccEEEeceEEEEE
Q 003127 77 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNAL---------NPFLLSGTKVQNGSCKMLV 147 (845)
Q Consensus 77 ~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~---------~~~v~~Gt~v~~g~~~~~V 147 (845)
+|+++||||||+|.|++||+|||||+|++++++.||||+|||||.|+.|..+ .+++|+||.+.+|+++++|
T Consensus 189 ~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~l~VdES~LTGES~pv~K~~~~~~~~~~~~~n~~f~GT~v~~G~~~~vV 268 (1034)
T 3ixz_A 189 QINADQLVVGDLVEMKGGDRVPADIRILQAQGRKVDNSSLTGESEPQTRSPECTHESPLETRNIAFFSTMCLEGTAQGLV 268 (1034)
T ss_pred EEEHHHCCCCcEEEEcCCceecCCeEEEEeCCceEEecccCCCCCCeeccCCCccccccccccceecceeEEeecceEEE
Confidence 9999999999999999999999999999998899999999999999999632 4579999999999999999
Q ss_pred EEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHH
Q 003127 148 TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 227 (845)
Q Consensus 148 ~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (845)
++||.+|++||+.+++.+.+.+++|+++.++++..++..++++++++++++++.. +. .+...
T Consensus 269 v~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------~~----------~~~~~ 330 (1034)
T 3ixz_A 269 VNTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI--------GY----------TFLRA 330 (1034)
T ss_pred EeehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--------cc----------hHHHH
Confidence 9999999999999999998889999999999999998888877777666653321 11 46778
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEe
Q 003127 228 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 307 (845)
Q Consensus 228 ~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~ 307 (845)
+..++++++++|||+||++++++++.+.++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+..
T Consensus 331 ~~~~i~l~v~~iPe~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~ 410 (1034)
T 3ixz_A 331 MVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSA 410 (1034)
T ss_pred HHHHHHHHHheeccccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccc
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999998876654
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEe
Q 003127 308 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 383 (845)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~ 383 (845)
+..............+..+.+...+.+||++....++++ .....|+|+|.|+++++...+.+....++.++++..+
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~~~~~~~~~~~ 490 (1034)
T 3ixz_A 411 DTTEDQSGQTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGYRERFPKVCEI 490 (1034)
T ss_pred cCcccccccccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHHHHhCcceEEe
Confidence 332211111111122344556677778887765443221 3456899999999999999888888888899999999
Q ss_pred cCCCCCceEEEEEEcCC---CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 384 PFNSVKKQMGVVIELPE---GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 384 ~F~s~~k~~sviv~~~~---~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
||+|+||+|+++++.++ +++.+++|||||.|+++|+.+. .+|...|++++.++.+.+..++++.+|+||+++|||.
T Consensus 491 pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~-~~~~~~~l~~~~~~~~~~~~~~~a~~G~RvLa~A~~~ 569 (1034)
T 3ixz_A 491 PFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSIL-IKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLY 569 (1034)
T ss_pred eecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhh-cCCceecCCHHHHHHHHHHHHHHHhcCcHhheEeEEe
Confidence 99999999999887543 6789999999999999999876 4677789999999999999999999999999999999
Q ss_pred cCCCCC--------CCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc-
Q 003127 461 IGNEFS--------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG- 531 (845)
Q Consensus 461 i~~~~~--------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~- 531 (845)
++.+.. +..+..|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++|+..++.
T Consensus 570 l~~~~~~~~~~~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~ 649 (1034)
T 3ixz_A 570 LSEKDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSE 649 (1034)
T ss_pred cChhhcccccccchhhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCch
Confidence 875421 11234689999999999999999999999999999999999999999999999999999975432
Q ss_pred -----------------------eeeeCcccccCCHHHHhhhcCCe--eEEEEeChhcHHHHHHHHHhhcCCEEEEEcCC
Q 003127 532 -----------------------IAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 586 (845)
Q Consensus 532 -----------------------~~i~g~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg 586 (845)
.+++|.++..+.++++.+...+. .+++|++|++|.++++.+|+. |+.|+|+|||
T Consensus 650 ~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a~GDG 728 (1034)
T 3ixz_A 650 TVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVTGDG 728 (1034)
T ss_pred HHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEEECCc
Confidence 46788888888888887776544 599999999999999999998 9999999999
Q ss_pred ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 003127 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 666 (845)
Q Consensus 587 ~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~ 666 (845)
.||++||++||+|||||.+|+|.+|++||+++.+++++++++++++||++|+|+++++.|.+++|+..+++.+++.+++.
T Consensus 729 ~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~ 808 (1034)
T 3ixz_A 729 VNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSV 808 (1034)
T ss_pred HHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCC-CCCCcCHHHHHHHHH-HHHHHHHHHHHHHHhcc---c-
Q 003127 667 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGR-KGNFISNVMWRNILG-QSLYQFLIIWYLQTRGK---A- 740 (845)
Q Consensus 667 ~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~- 740 (845)
+.|++++|++|+|+++|.+|+++++.|+|++++|++||+++ +++++++.++...++ .++++++..++.++... .
T Consensus 809 ~~pl~~~qiL~inl~~d~~palal~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~ 888 (1034)
T 3ixz_A 809 PLPLGCITILFIELCTDIFPSVSLAYEKAESDIMHLRPRNPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGW 888 (1034)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhcCCCChhhhhCCCCCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999987 688999988765443 36666554443322110 0
Q ss_pred ----cccCCC-------C----------------CccchhhhHHHHHHHHHHHhccccccccccccccc-CCchhHHHHH
Q 003127 741 ----VFRLDG-------P----------------DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFVA 792 (845)
Q Consensus 741 ----~~~~~~-------~----------------~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~-~~~~n~~~~~ 792 (845)
.++... . .....++|++|.+++++|++|.+++|+ ++.++|+ ++++|++++.
T Consensus 889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~-~~~s~~~~~~~~N~~l~~ 967 (1034)
T 3ixz_A 889 FPLLCVGLRPQWENHHLQDLQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKT-RRLSAFQQGFFRNRILVI 967 (1034)
T ss_pred ccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhcc-CCCcccccCCcccHHHHH
Confidence 011100 0 001136899999999999999999995 4567886 7789999999
Q ss_pred HHHHHHHHHH--HHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 793 VLTCTVLFQI--IIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 793 ~~~~~~~~~~--~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
++++++++++ .++|+++.+|+++|+++.+|+++++++++.++++|++|++.
T Consensus 968 ~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~ 1020 (1034)
T 3ixz_A 968 AIVFQVCIGCFLCYCPGMPNIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGV 1020 (1034)
T ss_pred HHHHHHHHHHHHHHhhhHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888875 45688999999999999999999999999999999999763
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-120 Score=1117.70 Aligned_cols=819 Identities=29% Similarity=0.393 Sum_probs=680.0
Q ss_pred hHHHHHHHHHHHHHHhhccc-CCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhhhhcCCeeEEEECCeEE
Q 003127 2 TLMILAVCALVSLVVGIATE-GWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQ----FKDLDREKKKITVQVARNGFRR 76 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~-~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~----~~~l~~~~~~~~~~V~r~g~~~ 76 (845)
+.++|++++++|++++.+.. .....|.+.....++++++++++++.+++++++ .+++.+ ..+.+++|+|||+++
T Consensus 105 ~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~-l~~~~a~V~Rdg~~~ 183 (1028)
T 2zxe_A 105 FSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKN-MVPQQALVIRDGEKS 183 (1028)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHT-TSCSEEEEEETTEEE
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hCCCeeEEEECCEEE
Confidence 56789999999998865330 000122233333444555666666666666543 444433 456789999999999
Q ss_pred EEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCC---------CeEEeccEEEeceEEEEE
Q 003127 77 KISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALN---------PFLLSGTKVQNGSCKMLV 147 (845)
Q Consensus 77 ~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~---------~~v~~Gt~v~~g~~~~~V 147 (845)
+|+++||+|||+|.|++||+|||||+|++|++|.||||+|||||.|+.|..++ |++|+||.+.+|+++++|
T Consensus 184 ~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~~~VdeS~LTGES~pv~K~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V 263 (1028)
T 2zxe_A 184 TINAEFVVAGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRSPEFSSENPLETRNIAFFSTNCVEGTARGVV 263 (1028)
T ss_dssp EEEGGGCCTTCEEEEETTCBCCSEEEEEEEEEEEEECHHHHSCCSCEECCSSCCCSSTTTCSSEECTTCEEEEEEEEEEE
T ss_pred EEEHHHCCcCCEEEECCCCEeeceEEEEeeCcEEEEcCccCCCCcceecccCCCCCCcccccceEEeCceEEcceEEEEE
Confidence 99999999999999999999999999999987999999999999999997543 479999999999999999
Q ss_pred EEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHH
Q 003127 148 TTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEF 227 (845)
Q Consensus 148 ~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (845)
++||.+|++||+.+++.+++.+++|+|+.+++++.++..++++++++++++.+. . +. .+...
T Consensus 264 ~~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~---~-----~~----------~~~~~ 325 (1028)
T 2zxe_A 264 VYTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---L-----GY----------SWLEA 325 (1028)
T ss_dssp EECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T-----TC----------CHHHH
T ss_pred EEeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c-----cC----------cHHHH
Confidence 999999999999999999999999999999999999988888777776665321 1 11 24566
Q ss_pred HHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEe
Q 003127 228 FAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEV 307 (845)
Q Consensus 228 ~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~ 307 (845)
+.+++++++++|||+||++++++++.+..+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+..
T Consensus 326 ~~~~i~llv~~iP~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~ 405 (1028)
T 2zxe_A 326 VIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA 405 (1028)
T ss_dssp HHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEEC
T ss_pred HHHHHHHHHHHcCchHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeec
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999998876654
Q ss_pred cCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEe
Q 003127 308 DNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVE 383 (845)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~ 383 (845)
+.............++..+.+.....+||++..+.++.+ .....|||+|.|+++++++.+.+....+..+++++.+
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~~~~~~~~~~~~~ 485 (1028)
T 2zxe_A 406 DTTENQSGAAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQGMRDRNPKIVEI 485 (1028)
T ss_dssp CCCTTCCSCCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHHHHHHHSCEEEEE
T ss_pred cCCCCccccccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHHHHHHhCceEEEe
Confidence 321111000011122334556667788887766432211 2345799999999999998866766677789999999
Q ss_pred cCCCCCceEEEEEEcC---CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 384 PFNSVKKQMGVVIELP---EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 384 ~F~s~~k~~sviv~~~---~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
||+|+||||+++++.+ ++++.+++|||||.|+++|+... .+|...+++++.++.+.+..++++++|+||+++|||+
T Consensus 486 pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~-~~g~~~~l~~~~~~~~~~~~~~~a~~G~RvL~~A~~~ 564 (1028)
T 2zxe_A 486 PFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL-LNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFA 564 (1028)
T ss_dssp CCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEEC-BTTBCCBCCHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhh-cCCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEEEe
Confidence 9999999999999864 46789999999999999998764 4677789999999999999999999999999999999
Q ss_pred cCCCCC--------CCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--
Q 003127 461 IGNEFS--------ADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-- 530 (845)
Q Consensus 461 i~~~~~--------~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-- 530 (845)
++.+.. +.....|+|++|+|+++++||+|++++++|++|+++||+++|+|||+..+|.++|+++|+..++
T Consensus 565 l~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~ 644 (1028)
T 2zxe_A 565 LPEDKYNEGYPFDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 644 (1028)
T ss_dssp CCSTTSCTTCCCCTTTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCC
T ss_pred cCccccccccccchhhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCch
Confidence 865310 1123457899999999999999999999999999999999999999999999999999998542
Q ss_pred ----------------------ceeeeCcccccCCHHHHhhhcCCe--eEEEEeChhcHHHHHHHHHhhcCCEEEEEcCC
Q 003127 531 ----------------------GIAIEGPEFREKSDEELSKLIPKI--QVMARSSPMDKHTLVKHLRTTLGEVVAVTGDG 586 (845)
Q Consensus 531 ----------------------~~~i~g~~~~~~~~~~~~~~~~~~--~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg 586 (845)
..+++|+++..+.++++.+.+.+. .+|+|++|+||..+++.+|+. |+.|+|+|||
T Consensus 645 ~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~iGDG 723 (1028)
T 2zxe_A 645 TIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAVTGDG 723 (1028)
T ss_dssp CHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEEEECS
T ss_pred hHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEEEcCC
Confidence 247788888888888877776544 499999999999999999998 9999999999
Q ss_pred ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 003127 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFSSACLTG 666 (845)
Q Consensus 587 ~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~ 666 (845)
.||+|||++||+|||||.+|+|.+|++||+++.+++++++.+++++||++|+|+++++.|.+++|+..++..+++.++..
T Consensus 724 ~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~ 803 (1028)
T 2zxe_A 724 VNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV 803 (1028)
T ss_dssp GGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCC
T ss_pred cchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999779999999999999999999999999999999999999999999999999998888888888
Q ss_pred CCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCC-CCcCHHHHHH-HHHHHHHHHHHHHHHHHhcc---c-
Q 003127 667 NAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKG-NFISNVMWRN-ILGQSLYQFLIIWYLQTRGK---A- 740 (845)
Q Consensus 667 ~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~- 740 (845)
+.|++++|++|+|+++|.+|++++++|++++++|++||++++. +++++.++.. ++..+++++++.++.++... .
T Consensus 804 ~~~l~~~qil~inl~~d~~pa~al~~e~~~~~~m~~~Pr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 883 (1028)
T 2zxe_A 804 PLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGF 883 (1028)
T ss_dssp CCSSCHHHHHHHHTTTTHHHHHHGGGCCCSSCGGGSCCCCTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhccCccchhhhccCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 9999999999999999999999999999999999999988665 9999988765 44567777766554432210 0
Q ss_pred -----------cccCCCC------Cc----------cchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHH
Q 003127 741 -----------VFRLDGP------DP----------DLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAV 793 (845)
Q Consensus 741 -----------~~~~~~~------~~----------~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~ 793 (845)
++..... .. ...++|++|.+++++|++|.+++|+ ++.++|+..++|++++.+
T Consensus 884 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~-~~~~~~~~~~~n~~l~~~ 962 (1028)
T 2zxe_A 884 LPMDLIGKRVRWDDRWISDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKT-RRNSIFQQGMKNKILIFG 962 (1028)
T ss_dssp CHHHHTTCHHHHSCTTCCCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-SSSCHHHHCSCCHHHHHH
T ss_pred ccchhhcccchhccccccccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHcc-CCcchhccCCcCHHHHHH
Confidence 1110000 00 0146899999999999999999995 455777755899999999
Q ss_pred HHHHHHHHHHH--HHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 794 LTCTVLFQIII--IELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 794 ~~~~~~~~~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
+++++++++++ +|+++.+|+++|+++.+|++++++++..++++|+.|++
T Consensus 963 ~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 1013 (1028)
T 2zxe_A 963 LFEETALAAFLSYCPGTDVALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFI 1013 (1028)
T ss_dssp HHHHHHHHHHHHHSTTHHHHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888876544 46789999999999999999999999999999999975
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-117 Score=1094.55 Aligned_cols=827 Identities=29% Similarity=0.410 Sum_probs=682.7
Q ss_pred hHHHHHHHHHHHHHHhhcccC--CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCe--EEE
Q 003127 2 TLMILAVCALVSLVVGIATEG--WPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGF--RRK 77 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~--~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~--~~~ 77 (845)
++++|++++++|+++++.+.+ +...|.++..+++.+++...++.+++++.++..+++.+ ..+.+++|+|||+ .++
T Consensus 62 ~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~-~~~~~a~V~R~g~~~~~~ 140 (995)
T 3ar4_A 62 LVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKE-YEPEMGKVYRADRKSVQR 140 (995)
T ss_dssp HHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGG-GSCSEEEEEBTTCSSCEE
T ss_pred HHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCeEEEEeCCCceEEE
Confidence 457889999999999876532 12368888777766666666677777766667777765 4577899999987 699
Q ss_pred EecCCcCCCcEEEEcCCCeeeccEEEEe--eCceeEecccCCCCCCcccccCC------------CCeEEeccEEEeceE
Q 003127 78 ISIYDLLPGDIVHLCMGDQVPADGLFVS--GFSVLINESSLTGESEPVNVNAL------------NPFLLSGTKVQNGSC 143 (845)
Q Consensus 78 i~~~~l~~GDii~l~~G~~iPaD~~ll~--~~~~~Vdes~LtGEs~p~~k~~~------------~~~v~~Gt~v~~g~~ 143 (845)
|+++||+|||+|.|++||+|||||+|++ +++|.||||+|||||.|+.|..+ ++.+|+||.+.+|++
T Consensus 141 I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~ 220 (995)
T 3ar4_A 141 IKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKA 220 (995)
T ss_dssp EEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEE
T ss_pred EEHHHCCCCCEEEECCCCcccccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceE
Confidence 9999999999999999999999999965 44689999999999999999754 268999999999999
Q ss_pred EEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCC-ChH
Q 003127 144 KMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGD-DAL 222 (845)
Q Consensus 144 ~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 222 (845)
+++|++||.+|++||+.+++.+++.+++|+|+++++++.++.++++++++++++++... .. . ..... ...
T Consensus 221 ~~~V~~tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~----~~~~~~~~~ 291 (995)
T 3ar4_A 221 LGIVATTGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGH--FN---D----PVHGGSWIR 291 (995)
T ss_dssp EEEEEECGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGG--GG---S----CSSSSCHHH
T ss_pred EEEEEEcCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hc---c----ccccchHHH
Confidence 99999999999999999999999989999999999999999888776666554432110 00 0 00011 112
Q ss_pred HHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcC
Q 003127 223 EILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICE 302 (845)
Q Consensus 223 ~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~ 302 (845)
.+...|..++++++++|||+||++++++++.+..+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+
T Consensus 292 ~~~~~~~~ai~l~v~aiP~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~ 371 (995)
T 3ar4_A 292 GAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIID 371 (995)
T ss_dssp HHHHHHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecC
Confidence 34456778899999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred ee---------EEecCCCCCCCCC--------CCCChhHHHHHHHHHHhcCCceEEecC-CCceEEcCCchHHHHHHHHH
Q 003127 303 EI---------KEVDNSKGTPAFG--------SSIPASASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGL 364 (845)
Q Consensus 303 ~~---------~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~e~al~~~~~ 364 (845)
.. +..++....+... .....+....+......||++....++ .+.....|||+|.|++++++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~ 451 (995)
T 3ar4_A 372 KVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVE 451 (995)
T ss_dssp EEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHH
T ss_pred cccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHH
Confidence 22 1111111111100 001112344456677788887765432 23345579999999999998
Q ss_pred HcCC-Ch--H-------------HhhhhcceEEEecCCCCCceEEEEEEcCCC-----eEEEEEeCcHHHHHHhchhccc
Q 003127 365 LLGG-DF--Q-------------AERQASKIVKVEPFNSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLN 423 (845)
Q Consensus 365 ~~~~-~~--~-------------~~~~~~~~l~~~~F~s~~k~~sviv~~~~~-----~~~~~~kGa~~~il~~~~~~~~ 423 (845)
+.|. +. . ..++.+++++++||+|+|||||++++.+++ +..+++|||||.|+++|+.+..
T Consensus 452 ~~g~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~ 531 (995)
T 3ar4_A 452 KMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV 531 (995)
T ss_dssp HHCTTCCCCTTSCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEE
T ss_pred HcCCccccccccccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhc
Confidence 8775 11 1 134578999999999999999999987655 5799999999999999987654
Q ss_pred cCCceecCCHHHHHHHHHHHHHH--HHhhchhhhheeeecCCCCCC-------CCCCCCCceEEEEEeeecCCCChhHHH
Q 003127 424 SNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSA-------DAPIPTEGYTCIGIVGIKDPMRPGVKE 494 (845)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~--~~~G~r~l~~a~~~i~~~~~~-------~~~~~e~~~~~lG~~~~~d~l~~~~~~ 494 (845)
++...|++++.++.+.+..+++ +++|+||+++|||+++..... ....+|+|++|+|+++++|++|+++++
T Consensus 532 -~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~i~D~lr~~~~~ 610 (995)
T 3ar4_A 532 -GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMG 610 (995)
T ss_dssp -TTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEEECCBCTTHHH
T ss_pred -CCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCccccccccccchhhhhhccCcEEEEEEeecCCCchhHHH
Confidence 4467789999999999999999 999999999999988643211 012347899999999999999999999
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC----ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHH
Q 003127 495 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 570 (845)
Q Consensus 495 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~----~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 570 (845)
+|++|+++|++++|+|||+..+|.++|+++|+...+ ..+++|+++..+.++++.+.+.+..+|+|++|+||.++++
T Consensus 611 ~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~~P~~K~~~v~ 690 (995)
T 3ar4_A 611 SIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVE 690 (995)
T ss_dssp HHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESCCSSHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEeCHHHHHHHHH
Confidence 999999999999999999999999999999997643 3588999999998888888888888999999999999999
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 571 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV 650 (845)
Q Consensus 571 ~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~ 650 (845)
.+|++ |+.|+|+|||.||+|||++||+||||| +|++.+|++||+++.+++++++.+++++||++|+|+++++.|.+++
T Consensus 691 ~l~~~-g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~ 768 (995)
T 3ar4_A 691 YLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISS 768 (995)
T ss_dssp HHHTT-TCCEEEEECSGGGHHHHHHSTEEEEET-TSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHC-CCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 999999999999999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHH
Q 003127 651 NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLI 730 (845)
Q Consensus 651 n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (845)
|+..++..+++.+++.+.|++++|++|+|+++|.+|+++++.+++++++|++||+.+++++++++++..++..+++++++
T Consensus 769 Ni~~~~~~~~~~~~g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~~~~~m~~~P~~~~~~l~~~~~~~~~~~~g~~~~~~ 848 (995)
T 3ar4_A 769 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAA 848 (995)
T ss_dssp HHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTTTHHHHHHHTTCCCCTTGGGSCCCCTTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHhhccCCCChhHHhCCCCCCcccccCHHHHHHHHHHHHHHHHH
Confidence 99999888888888888999999999999999999999999999999999999999999999999998888889888766
Q ss_pred HHHH--HHhc-cc-c----------ccC-CC--C-C--------ccchhhhHHHHHHHHHHHhcccccccccccccc-cC
Q 003127 731 IWYL--QTRG-KA-V----------FRL-DG--P-D--------PDLILNTLIFNTFVFCQVFNEISSREMEKINVF-KG 783 (845)
Q Consensus 731 ~~~~--~~~~-~~-~----------~~~-~~--~-~--------~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~-~~ 783 (845)
.+.. ++.. .. . +.. ++ . . .....+|++|++++++|++|.+++|+.+ .++| .+
T Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~-~~~~~~~ 927 (995)
T 3ar4_A 849 TVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSEN-QSLMRMP 927 (995)
T ss_dssp HHHHHHHHTSSCSSSCCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSS-CCTTTSC
T ss_pred HHHHHHHHHHhcccccccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccc-cchhccC
Confidence 5432 2111 00 0 000 00 0 0 0124689999999999999999999643 3455 47
Q ss_pred CchhHHHHHHHHHHHHHHH--HHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhc
Q 003127 784 ILKNYVFVAVLTCTVLFQI--IIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842 (845)
Q Consensus 784 ~~~n~~~~~~~~~~~~~~~--~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~ 842 (845)
+++|++++.+++.++++++ +++|+++.+|++.|+++.+|+++++++++.++++|++|++
T Consensus 928 ~~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~ 988 (995)
T 3ar4_A 928 PWVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 988 (995)
T ss_dssp GGGCHHHHHHHHHHHHHHHHHHHSTHHHHHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999998888877654 4457889999999999999999999999999999999976
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-111 Score=1009.82 Aligned_cols=748 Identities=21% Similarity=0.338 Sum_probs=604.6
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecCC
Q 003127 3 LMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIYD 82 (845)
Q Consensus 3 ~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~~ 82 (845)
.++|++++++++++| .|.++..+++.+++..++..+++++.++..+++.+ ..+.+++|+|||++++|+++|
T Consensus 125 ~~ll~~aai~s~~~g--------~~~~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~-l~~~~a~V~RdG~~~~I~~~e 195 (920)
T 1mhs_A 125 QFVMEGAAVLAAGLE--------DWVDFGVICGLLLLNAVVGFVQEFQAGSIVDELKK-TLALKAVVLRDGTLKEIEAPE 195 (920)
T ss_dssp HHHHHHHHHHCTTCS--------CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-CCCSSCEEECSSSEEECCTTT
T ss_pred HHHHHHHHHHHHHHH--------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEECCEEEEEEHHH
Confidence 467888999988876 58887766665566666677777777777666655 345689999999999999999
Q ss_pred cCCCcEEEEcCCCeeeccEEEEeeCc-eeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHH
Q 003127 83 LLPGDIVHLCMGDQVPADGLFVSGFS-VLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMA 161 (845)
Q Consensus 83 l~~GDii~l~~G~~iPaD~~ll~~~~-~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 161 (845)
|+|||+|.|++||+|||||+|++|++ +.||||+|||||.|+.|..+ +.+|+||.+.+|+++++|++||.+|++||+.+
T Consensus 196 Lv~GDiV~l~~Gd~VPaDg~ll~g~~~l~VDES~LTGES~PV~K~~g-d~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~ 274 (920)
T 1mhs_A 196 VVPGDILQVEEGTIIPADGRIVTDDAFLQVDQSALTGESLAVDKHKG-DQVFASSAVKRGEAFVVITATGDNTFVGRAAA 274 (920)
T ss_dssp SCTTSEEEECTTCBCSSEEEEEEESSCCEEBCTTTSSCCCCEECCSS-CEECSCBCCSCCCEEEEEEECSTTCSTTTTTS
T ss_pred cCCCCEEEeCCCCccccceEEEecCceeeeeccccCCCCcceEecCC-CeeecCceEecceEEEEEEEeCCcCHHHHHHH
Confidence 99999999999999999999999985 89999999999999999865 57999999999999999999999999999999
Q ss_pred hhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcCC
Q 003127 162 TLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVPE 241 (845)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P~ 241 (845)
++++.+.+++|+++.++++..++.++++++++++++. ++ +... .+...+..++++++++|||
T Consensus 275 lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~---~~------------~~~~---~~~~~l~~av~llV~aiP~ 336 (920)
T 1mhs_A 275 LVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVS---SF------------YRSN---PIVQILEFTLAITIIGVPV 336 (920)
T ss_dssp SCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHT---TT------------TTTC---CHHHHHHHHHHHHHHHSCC
T ss_pred HHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH---HH------------hcCC---cHHHHHHHHHHHHHHhCch
Confidence 9998888899999999999988776655544433321 10 0001 3567788899999999999
Q ss_pred chHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCC
Q 003127 242 GLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIP 321 (845)
Q Consensus 242 ~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (845)
+||++++++++.+..+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .
T Consensus 337 aLp~~vti~la~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~----------------~ 400 (920)
T 1mhs_A 337 GLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV----------------D 400 (920)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC----------------C
T ss_pred hHHHHHHHHHHHHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCC----------------C
Confidence 999999999999999999999999999999999999999999999999999999877542210 0
Q ss_pred hhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCC
Q 003127 322 ASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEG 401 (845)
Q Consensus 322 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~ 401 (845)
++ + +....+.|+... +. .+||+|.|+++++.+.+.. ......+++++.+||+|.+|+|+++++.+++
T Consensus 401 ~~--~-ll~~a~l~~~~~----~~-----~~~P~e~Al~~~~~~~~~~-~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g 467 (920)
T 1mhs_A 401 PE--D-LMLTACLAASRK----KK-----GIDAIDKAFLKSLKYYPRA-KSVLSKYKVLQFHPFDPVSKKVVAVVESPQG 467 (920)
T ss_dssp CT--H-HHHHHHHSCCCS----SC-----SCCSHHHHHHHHHHHSSSC-CGGGSCCCEEEEEEEETTTTEEEEEECCSSS
T ss_pred HH--H-HHHHHHHhcCCc----cc-----CCChHHHHHHHHHHhcccc-hhhccccceeEEeeccCCCCeEEEEEEeCCC
Confidence 01 1 223344454321 00 2499999999998876542 2234568899999999999999999987677
Q ss_pred eEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEE
Q 003127 402 GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGI 481 (845)
Q Consensus 402 ~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~ 481 (845)
+.++++||+|+.++++|+. ..+++++.++.+.+..++++++|+||+++|++. .|++++|+|+
T Consensus 468 ~~~~~~KGape~il~~c~~-------~~~~~~~~~~~~~~~~~~~a~~G~RvL~vA~~~-----------~e~~l~~lGl 529 (920)
T 1mhs_A 468 ERITCVKGAPLFVLKTVEE-------DHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR-----------GEGSWEILGI 529 (920)
T ss_dssp SCEEEEEECHHHHHHHCCC-------SSCCCHHHHHHHHHHHHHHHTSSCCCCEECCCS-----------SSCSCCCCBB
T ss_pred cEEEEEeCCHHHHHHhccc-------cCCCCHHHHHHHHHHHHHHHhCCCEEEEEEEec-----------cccccEEEEE
Confidence 7889999999999999963 135677778889999999999999999999873 1467899999
Q ss_pred eeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc----CCceeeeCcccccCCHHHHhhhcCCeeEE
Q 003127 482 VGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT----DNGIAIEGPEFREKSDEELSKLIPKIQVM 557 (845)
Q Consensus 482 ~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~----~~~~~i~g~~~~~~~~~~~~~~~~~~~v~ 557 (845)
++++||+||+++++|++||++||+++|+|||+..||.++|+++|+.. .+..+++|+ ..++++++.+.+.+..+|
T Consensus 530 i~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~~~V~ 607 (920)
T 1mhs_A 530 MPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEAADGF 607 (920)
T ss_dssp CCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTTTSCE
T ss_pred EEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhhCeEE
Confidence 99999999999999999999999999999999999999999999964 223455555 456677788888888999
Q ss_pred EEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHH
Q 003127 558 ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 637 (845)
Q Consensus 558 ~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~ 637 (845)
+|++|+||.++|+.+|++ |+.|+|+|||.||+|||++||+||||| +|++.+|++||+++.+++++++.+++++||++|
T Consensus 608 arv~P~~K~~iV~~Lq~~-g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~ 685 (920)
T 1mhs_A 608 AEVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDAARSAADIVFLAPGLGAIIDALKTSRQIF 685 (920)
T ss_dssp ESCCSTHHHHHHHHHHTT-TCCCEECCCCGGGHHHHHHSSEEEEET-TSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHhC-CCeEEEEcCCcccHHHHHhCCcCcccc-cccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHH
Confidence 999999999999999998 999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHH
Q 003127 638 INIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMW 717 (845)
Q Consensus 638 ~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 717 (845)
+|+++++.|.++.|+....+..+...+.+ .++++.|++|.|++.|. |+++++.++++.+ ++|++++.+-+ +
T Consensus 686 ~ni~k~i~~~l~~n~~~~~~~~~~~~~~~-~~l~~~~il~~~l~~d~-~~lal~~e~~~~~---~~P~~~~~~~~----~ 756 (920)
T 1mhs_A 686 HRMYAYVVYRIALSIHLEIFLGLWIAILN-RSLNIELVVFIAIFADV-ATLAIAYDNAPYS---QTPVKWNLPKL----W 756 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCS-CCCCHHHHHHHHHHHTT-HHHHCCCCCSGGG---GSCCCCCSSSC----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCHHHHHHHHHHHHH-HhhhhcccCcccc---cCCCCchHHHH----H
Confidence 99999999999999976444433333333 34899999999999997 8999999988765 67766543221 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCC--CccchhhhHHHHHHHHHHHhcccccccccccccccCCchhHHHHHHHH
Q 003127 718 RNILGQSLYQFLIIWYLQTRGKAVFRLDGP--DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLT 795 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~ 795 (845)
..++..+++.+...++.++.... ++.++. ......+|++|.+++++|+++.+++|+.+ ++|+++ .|++++.+++
T Consensus 757 ~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~--~~~~~~-~~~~~~~~~~ 832 (920)
T 1mhs_A 757 GMSVLLGVVLAVGTWITVTTMYA-QGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANG--PFWSSI-PSWQLSGAIF 832 (920)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTT-TTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSS--SCSCCS-CTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hcccccccchhhHHHHHHHHHHHHHHHHHHHHhccch--hhhcCc-hHHHHHHHHH
Confidence 22223444444333222211100 111110 11125789999999999999999999533 366654 7888888887
Q ss_pred HHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhccC
Q 003127 796 CTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQV 844 (845)
Q Consensus 796 ~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~~ 844 (845)
..++++ +++++.+ +|+++|++|.+|+.+++++++.+++.|+.|++-.
T Consensus 833 ~~~~~~-~~~~~~~-~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~ 879 (920)
T 1mhs_A 833 LVDILA-TCFTIWG-WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQ 879 (920)
T ss_dssp HHHHHH-HHHHSSS-STTSCSHHHHTHHHHHHHTTHHHHHHHHHHHCCC
T ss_pred HHHHHH-HHHHHhh-hhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777773 3444555 8999999999999999999999999999997643
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-108 Score=980.31 Aligned_cols=761 Identities=20% Similarity=0.295 Sum_probs=571.6
Q ss_pred hHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCeeEEEECCeEEEEecC
Q 003127 2 TLMILAVCALVSLVVGIATEGWPKGAHDGLGIVMSILLVVFVTATSDYKQSLQFKDLDREKKKITVQVARNGFRRKISIY 81 (845)
Q Consensus 2 ~~~il~~~a~ls~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~V~r~g~~~~i~~~ 81 (845)
+.++|++++++|++++... +....|.+++.+++.+++..++..+++++.++..+++.+ ..+.+++|+|||++++|+++
T Consensus 69 ~~~il~~aaiis~~l~~~~-~~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~-~~~~~a~V~RdG~~~~I~~~ 146 (885)
T 3b8c_A 69 LSWVMEMAAIMAIALANGD-GRPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMA-GLAPKTKVLRDGKWSEQEAA 146 (885)
T ss_dssp GSSHHHHHHHGGGGSSCCT-TSCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTT-SCSCCCCCCCSSCSCCCCTT
T ss_pred HHHHHHHHHHHHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCeEEEEECCEEEEEEHH
Confidence 3468899999999987532 233478888766544444444455566666666666654 34668999999999999999
Q ss_pred CcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHH
Q 003127 82 DLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMA 161 (845)
Q Consensus 82 ~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~ 161 (845)
||+|||+|.+++||+|||||+|++|+++.||||+|||||.|+.|..++ .+|+||.+.+|+++++|++||.+|++||+.+
T Consensus 147 ~Lv~GDiV~l~~Gd~IPaDg~ll~g~~l~VdES~LTGES~Pv~K~~g~-~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~ 225 (885)
T 3b8c_A 147 ILVPGDIVSIKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKHPGQ-EVFSGSTCKQGEIEAVVIATGVHTFFGKAAH 225 (885)
T ss_dssp TTCTTSBCCCCSSCCCSSCCCCCCSSCBCCCCCSTTCCSSCCCBSSCC-CCCSCCCCCSCCCCCBCCSCTTTTTSTTCCC
T ss_pred HCCCCCEEEECCCCEEeeceEEEEcCcccccccccCCCCcceEecCCC-ccccCeEEeeeEEEEEEEEcCcccHHHHHHH
Confidence 999999999999999999999999988899999999999999998755 6999999999999999999999999999998
Q ss_pred hhccCCCCCChhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhhccCCCccccCCCChHHHHHHHHHHHHHHHhhcC
Q 003127 162 TLSEGGDDETPLQVKLNGVATIIGKIG-LFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFFAIAVTIVVVAVP 240 (845)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~P 240 (845)
.+++ ..+++|+|+.+++++.++...+ +.+++++++++ . + .+. .+...+..++++++++||
T Consensus 226 lv~~-~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~----~---~-~~~----------~~~~~~~~~v~llv~aiP 286 (885)
T 3b8c_A 226 LVDS-TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMY----P---I-QRR----------KYRDGIDNLLVLLIGGIP 286 (885)
T ss_dssp SCCS-CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTT----T---T-TCS----------CSTTHHHHHHHHTTTTCC
T ss_pred HHhc-ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H---H-ccC----------cHHHHHHHHHHHHHHHhh
Confidence 8876 5677999999999987643322 21221111110 0 0 000 122356778999999999
Q ss_pred CchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCC
Q 003127 241 EGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSI 320 (845)
Q Consensus 241 ~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (845)
|+||++++++++.+..+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+.+. +.. ....
T Consensus 287 ~aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~-----~~~--------~~~~ 353 (885)
T 3b8c_A 287 IAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLV-----EVF--------CKGV 353 (885)
T ss_dssp SSTTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCC-----CSS--------CSST
T ss_pred hHHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEE-----ecc--------CCCC
Confidence 999999999999999999999999999999999999999999999999999999963221 000 0001
Q ss_pred ChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCC
Q 003127 321 PASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPE 400 (845)
Q Consensus 321 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~ 400 (845)
+ ..+.+ .....|+... .+||+|.|+++++.+ ....+..+++++.+||+|.+|+|+++++..+
T Consensus 354 ~--~~~ll-~~aa~~~~~~-----------~~~p~~~Al~~~~~~----~~~~~~~~~~~~~~pF~s~~k~~sv~~~~~~ 415 (885)
T 3b8c_A 354 E--KDQVL-LFAAMASRVE-----------NQDAIDAAMVGMLAD----PKEARAGIREVHFLPFNPVDKRTALTYIDGS 415 (885)
T ss_dssp T--HHHHH-HHHHHHCCSS-----------SCCSHHHHHHHTTCC----TTCCCCSSCCBCCCCCCTTTCCCCCBBCSSS
T ss_pred C--HHHHH-HHHHHHhCCC-----------CCCchHHHHHHHhhc----hhhHhhcCceeecccCCcccceEEEEEEecC
Confidence 1 12222 3333444311 579999999987642 1122345778889999999999999988666
Q ss_pred CeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEE
Q 003127 401 GGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480 (845)
Q Consensus 401 ~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG 480 (845)
++.+.++||+||.++++|+. +++.++.+.+..++++++|+|++++|+++++++. .+..|+|++|+|
T Consensus 416 g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~~~~~a~~G~rvl~vA~~~~~~~~---~~~~e~~l~~lG 481 (885)
T 3b8c_A 416 GNWHRVSKGAPEQILELAKA-----------SNDLSKKVLSIIDKYAERGLRSLAVARQVVPEKT---KESPGAPWEFVG 481 (885)
T ss_dssp SCBCBCCCCSGGGTSSSSCC-----------CSTTTTTHHHHHHHHTTTTCEEEEECCBCCCSSS---SSCCCCCCCCCE
T ss_pred CcEEEEEeCCHHHHHHhccC-----------chhhHHHHHHHHHHHHhCCCeEEEEEEecccccc---ccccccCcEEEE
Confidence 77788999999999999962 1112234677889999999999999999886532 245678999999
Q ss_pred EeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC--CceeeeCccccc-CCHHHHhhhcCCeeEE
Q 003127 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFRE-KSDEELSKLIPKIQVM 557 (845)
Q Consensus 481 ~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~--~~~~i~g~~~~~-~~~~~~~~~~~~~~v~ 557 (845)
+++++||+||+++++|++|+++||+++|+|||+..+|.++|+++|+..+ ...++.|.+++. +++.++.+.+.+..+|
T Consensus 482 li~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~ 561 (885)
T 3b8c_A 482 LLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGF 561 (885)
T ss_dssp EEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCE
T ss_pred EEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccccccccchhHHHHHHhhCcEE
Confidence 9999999999999999999999999999999999999999999999642 134566766654 5555566667777899
Q ss_pred EEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHH
Q 003127 558 ARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 637 (845)
Q Consensus 558 ~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~ 637 (845)
+|++|+||.++|+.+|++ |+.|+|+|||.||+|||++||+||||| +|+|.+|++||+++.+++++++.+++++||++|
T Consensus 562 arv~P~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdvGIAmg-~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~ 639 (885)
T 3b8c_A 562 AGVFPEHKYEIVKKLQER-KHIVGMTGDGVNDAPALKKADIGIAVA-DATDAARGASDIVLTEPGLSVIISAVLTSRAIF 639 (885)
T ss_dssp ECCCHHHHHHHHHHHHHT-TCCCCBCCCSSTTHHHHHHSSSCCCCS-SSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHH
T ss_pred EEECHHHHHHHHHHHHHC-CCeEEEEcCCchhHHHHHhCCEeEEeC-CccHHHHHhcceeeccCchhHHHHHHHHHHHHH
Confidence 999999999999999998 999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHH
Q 003127 638 INIQKFVQFQLTVNVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMW 717 (845)
Q Consensus 638 ~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~ 717 (845)
+|+++++.|.+++|+..++..+... ...+.|++++|++|+|++.+..+ ++++.+++++. ++|. ...+ +..+
T Consensus 640 ~ni~~~i~~~l~~n~~~~~~~~~~~-~~~~~~l~p~~il~i~l~~d~~~-l~l~~~~~~~~---~~p~---~~~~-~~~~ 710 (885)
T 3b8c_A 640 QRMKNYTIYAVSITIRIVFGFMLIA-LIWEFDFSAFMVLIIAILNDGTI-MTISKDRVKPS---PTPD---SWKL-KEIF 710 (885)
T ss_dssp HHHHHHHHHHHHHTTTTTSTTHHHH-SSCSSCSCHHHHHHHHHHHHTTT-CCCCCCCCCCS---SCCC---STTT-TTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HccCcCcCHHHHHHHHHHHHHHH-HhhcccccCcc---cCCc---chhH-HHHH
Confidence 9999999999999986544333333 34467899999999999999875 88888776542 2332 2222 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHhccc------cccCCCCC-ccchhhhH-HHHHHHHHHHhcccccccccccccccCCchhHH
Q 003127 718 RNILGQSLYQFLIIWYLQTRGKA------VFRLDGPD-PDLILNTL-IFNTFVFCQVFNEISSREMEKINVFKGILKNYV 789 (845)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-~~~~~~t~-~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~ 789 (845)
...+..++++++..+.+++.... .++.+... .....+|. +|.++++.|+ ++|++|+. +.++++.+ .|++
T Consensus 711 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~-~~~~~Rs~-~~~~~~~~-~~~~ 787 (885)
T 3b8c_A 711 ATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQA-LIFVTRSR-SWSFVERP-GALL 787 (885)
T ss_dssp TTHHHHHSSTHHHHTTSSSCTTTTTTTTCCCCSSCCGGGTHHHHTTTTTTTSSTTGG-GTTCSSSC-TTTSTTST-TTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCccccccCcccccchHHHHHHHHHHHHHHHHHH-HHHHhccC-CCCcccCc-cHHH
Confidence 22334455555544433322111 11111000 01123344 5556667775 78999953 43444433 4444
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 790 FVAVLTCTVLFQIIIIELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 790 ~~~~~~~~~~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
++.+++..++++++.+.....+++++|++|.+|+++++.+++.+++.|+.|++.
T Consensus 788 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~ 841 (885)
T 3b8c_A 788 MIAFLIAQLIATLIAVYANWEFAKIRGIGWGWAGVIWLYSIVTYFPLDVFKFAI 841 (885)
T ss_dssp SGGGSSTTTTTTSSSSSCCCCSSCCCCCTTTTHHHHHHHTGGGTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333333333322222234556899999999999999999999999999763
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-78 Score=712.86 Aligned_cols=475 Identities=26% Similarity=0.370 Sum_probs=409.7
Q ss_pred hcCCeeEEEE-CCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEe
Q 003127 62 KKKITVQVAR-NGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQN 140 (845)
Q Consensus 62 ~~~~~~~V~r-~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~ 140 (845)
..+.+++++| ||++++|++++|+|||+|.|++||+|||||+|++|+ +.||||+|||||.|+.|..++ .+++||.+.+
T Consensus 222 l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~-~~VDES~LTGES~Pv~K~~gd-~v~~Gt~~~~ 299 (736)
T 3rfu_A 222 LVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQEGR-SFVDESMVTGEPIPVAKEASA-KVIGATINQT 299 (736)
T ss_dssp CCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEECSSC-EEEECSSSTTCSSCEEECTTC-EECTTCEEES
T ss_pred cCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEEECc-eEeeecccCCccccEEeccCC-cCCCceEecc
Confidence 4567888887 999999999999999999999999999999999997 699999999999999998765 5999999999
Q ss_pred ceEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCC
Q 003127 141 GSCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDD 220 (845)
Q Consensus 141 g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (845)
|.++++|++||.+|.++|+.+++.+++.+++|+|+.+++++.++++++++++++++++|... . ...
T Consensus 300 G~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~---~---~~~-------- 365 (736)
T 3rfu_A 300 GSFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALL---G---PQP-------- 365 (736)
T ss_dssp CCCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH---C---SSS--------
T ss_pred ceEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---C---CCc--------
Confidence 99999999999999999999999999888999999999999999999999998888876431 0 000
Q ss_pred hHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEE
Q 003127 221 ALEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACI 300 (845)
Q Consensus 221 ~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~ 300 (845)
.+...+..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|+||||||||||+|+|+|.+++.
T Consensus 366 --~~~~~l~~ai~vlviacPcaL~la~p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~ 443 (736)
T 3rfu_A 366 --ALSYGLIAAVSVLIIACPCALGLATPMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVT 443 (736)
T ss_dssp --STTHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEE
T ss_pred --hHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEe
Confidence 134567789999999999999999999999999999999999999999999999999999999999999999999873
Q ss_pred cCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceE
Q 003127 301 CEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIV 380 (845)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l 380 (845)
.+. . ..+.+..+...+ ..++||.+.|+++++++.+....
T Consensus 444 ~~~-----------------~--~~~~l~~aa~le-------------~~s~hPla~Aiv~~a~~~~~~~~--------- 482 (736)
T 3rfu_A 444 DDF-----------------V--EDNALALAAALE-------------HQSEHPLANAIVHAAKEKGLSLG--------- 482 (736)
T ss_dssp SSS-----------------C--HHHHHHHHHHHH-------------HSSCCHHHHHHHHHHHTTCCCCC---------
T ss_pred cCC-----------------C--HHHHHHHHHHHh-------------hcCCChHHHHHHHHHHhcCCCcc---------
Confidence 221 0 122222222221 12679999999999987765432
Q ss_pred EEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeee
Q 003127 381 KVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACME 460 (845)
Q Consensus 381 ~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~ 460 (845)
...+|++.+++. +....++.. +.+|+++.+.+.+.. ...+.+..++++++|+|++++|+
T Consensus 483 ~~~~f~~~~g~g-v~~~~~g~~---~~~G~~~~~~~~~~~---------------~~~~~~~~~~~~~~G~~vl~va~-- 541 (736)
T 3rfu_A 483 SVEAFEAPTGKG-VVGQVDGHH---VAIGNARLMQEHGGD---------------NAPLFEKADELRGKGASVMFMAV-- 541 (736)
T ss_dssp CCSCCCCCTTTE-EEECSSSSC---EEEESHHHHHHHCCC---------------CHHHHHHHHHHHHTTCEEEEEEE--
T ss_pred CcccccccCCce-EEEEECCEE---EEEcCHHHHHHcCCC---------------hhHHHHHHHHHHhcCCeEEEEEE--
Confidence 245677776653 333333332 456998877553211 12356678899999999999985
Q ss_pred cCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc
Q 003127 461 IGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540 (845)
Q Consensus 461 i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~ 540 (845)
|.+++|+++++|++|++++++|++|+++|++++|+|||+..++.++++++|+..
T Consensus 542 --------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~------------ 595 (736)
T 3rfu_A 542 --------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK------------ 595 (736)
T ss_dssp --------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC------------
T ss_pred --------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE------------
Confidence 458999999999999999999999999999999999999999999999999974
Q ss_pred cCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEecc
Q 003127 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 541 ~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~ 620 (845)
++++++|++|.++++.++++ |+.|+|+|||.||+|||++||+||||| +|+|.++++||+++.+
T Consensus 596 ---------------v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~paL~~AdvGIAmg-~g~d~a~~~AD~vl~~ 658 (736)
T 3rfu_A 596 ---------------VVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDAPALAKADIGIAMG-TGTDVAIESAGVTLLH 658 (736)
T ss_dssp ---------------EECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTHHHHHHSSEEEEES-SSCSHHHHHCSEEECS
T ss_pred ---------------EEEecCHHHHHHHHHHHHhc-CCEEEEEECChHhHHHHHhCCEEEEeC-CccHHHHHhCCEEEcc
Confidence 89999999999999999998 999999999999999999999999999 8999999999999999
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 621 DNFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659 (845)
Q Consensus 621 ~~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 659 (845)
++++++.+++++||++++|+++++.|++.||++.+.+..
T Consensus 659 ~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~iplAa 697 (736)
T 3rfu_A 659 GDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPLAA 697 (736)
T ss_dssp CCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887654
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-76 Score=692.03 Aligned_cols=470 Identities=28% Similarity=0.378 Sum_probs=396.8
Q ss_pred hcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEec
Q 003127 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNG 141 (845)
Q Consensus 62 ~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g 141 (845)
..+.+++|+|||++++++++||+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..++ .+|+||.+.+|
T Consensus 130 l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~-~~VdeS~LTGES~Pv~K~~g~-~v~~Gt~~~~g 207 (645)
T 3j08_A 130 LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGATINNTG 207 (645)
T ss_dssp TSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTTCEECSS
T ss_pred CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECc-EEEEcccccCCCCceecCCCC-EeeccEEEecC
Confidence 4577899999999999999999999999999999999999999997 699999999999999998755 69999999999
Q ss_pred eEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCh
Q 003127 142 SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDA 221 (845)
Q Consensus 142 ~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (845)
.++++|++||.+|.+||+.+.+++++.+++|+|+.+++++.++++++++++++++++|.. ..+.
T Consensus 208 ~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~-------~~~~--------- 271 (645)
T 3j08_A 208 VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYF-------IAHA--------- 271 (645)
T ss_dssp CEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSC-------CCSC---------
T ss_pred cEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCC---------
Confidence 999999999999999999999999999999999999999999998888877777664311 0010
Q ss_pred HHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEc
Q 003127 222 LEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301 (845)
Q Consensus 222 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~ 301 (845)
++...+..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|++|||||||||+|+|++.+++..
T Consensus 272 -~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~ 350 (645)
T 3j08_A 272 -PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL 350 (645)
T ss_dssp -SCCCTTTTTHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEES
T ss_pred -cHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeC
Confidence 1122355678899999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred CeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEE
Q 003127 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVK 381 (845)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~ 381 (845)
+.. ..+.+..+..... .+.||.+.|+++++++.+......
T Consensus 351 ~~~-------------------~~~~l~~aa~~e~-------------~s~hPla~Aiv~~a~~~g~~~~~~-------- 390 (645)
T 3j08_A 351 NGD-------------------ERELLRLAAIAER-------------RSEHPIAEAIVKKALEHGIELGEP-------- 390 (645)
T ss_dssp SSC-------------------HHHHHHHHHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCSC--------
T ss_pred CCC-------------------HHHHHHHHHHHhh-------------cCCChhHHHHHHHHHhcCCCcCCc--------
Confidence 311 1222222222211 157999999999999887653211
Q ss_pred EecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeec
Q 003127 382 VEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI 461 (845)
Q Consensus 382 ~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i 461 (845)
.+|++...+ ++.. ..+.+|+++.+.+.. . +.. +.+.+..+++.++|+|++.+|+
T Consensus 391 -~~~~~~~g~-g~~~-------~~v~~g~~~~~~~~~--------~--~~~----~~~~~~~~~~~~~g~~~l~va~--- 444 (645)
T 3j08_A 391 -EKVEVIAGE-GVVA-------DGILVGNKRLMEDFG--------V--AVS----NEVELALEKLEREAKTAVIVAR--- 444 (645)
T ss_dssp -CCCEEETTT-EEEE-------TTEEEECHHHHHHTT--------C--CCC----HHHHHHHHHHHTTTCCCEEEEE---
T ss_pred -cceEEecCC-ceEE-------EEEEECCHHHHHhcC--------C--Ccc----HHHHHHHHHHHhcCCeEEEEEE---
Confidence 112211111 0000 124568876654321 1 111 3466778889999999999985
Q ss_pred CCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccccc
Q 003127 462 GNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541 (845)
Q Consensus 462 ~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~ 541 (845)
|.+++|+++++|+++|+++++|++|+++|++++|+|||+..++.++++++|+..
T Consensus 445 -------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~------------- 498 (645)
T 3j08_A 445 -------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------- 498 (645)
T ss_dssp -------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------
T ss_pred -------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE-------------
Confidence 568999999999999999999999999999999999999999999999999974
Q ss_pred CCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccC
Q 003127 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 621 (845)
Q Consensus 542 ~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~ 621 (845)
+++++.|++|.++++.++++ +.|+|+|||.||+||+++||+||||| +|++.++++||+++.++
T Consensus 499 --------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~ 561 (645)
T 3j08_A 499 --------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRD 561 (645)
T ss_dssp --------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHHHHHHSSEEEEEC-CCSCCSSCCSSSEESSC
T ss_pred --------------EEEeCCHHhHHHHHHHHhhC--CeEEEEeCCHhHHHHHHhCCEEEEeC-CCcHHHHHhCCEEEecC
Confidence 89999999999999999986 78999999999999999999999999 99999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 622 NFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNF 659 (845)
Q Consensus 622 ~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 659 (845)
+++++.+++++||++++|+++++.|++.+|++.+.+..
T Consensus 562 ~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~la~ 599 (645)
T 3j08_A 562 DLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAA 599 (645)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999776654
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-76 Score=696.64 Aligned_cols=471 Identities=28% Similarity=0.377 Sum_probs=398.6
Q ss_pred hcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEeccEEEec
Q 003127 62 KKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSGTKVQNG 141 (845)
Q Consensus 62 ~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~Gt~v~~g 141 (845)
..+.+++|+|||++++++++||+|||+|.+++||+|||||+|++|+ +.||||+|||||.|+.|..++ .+|+||.+.+|
T Consensus 208 l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~G~-~~VdeS~LTGES~pv~K~~g~-~v~~Gt~~~~g 285 (723)
T 3j09_A 208 LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKGD-EVFGATINNTG 285 (723)
T ss_dssp TSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTTC-EECTTCEECSS
T ss_pred cCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEEECC-eEEecccccCCCcceeecCCC-eeccceEEecC
Confidence 4577899999999999999999999999999999999999999997 699999999999999998655 69999999999
Q ss_pred eEEEEEEEEeecchhhHHHHhhccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCccccCCCCh
Q 003127 142 SCKMLVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDA 221 (845)
Q Consensus 142 ~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (845)
.++++|+++|.+|.+||+.+++++++.+++|+|+.+++++.++++++++++++++++|.. ..+.
T Consensus 286 ~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~-------~~~~--------- 349 (723)
T 3j09_A 286 VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYF-------IAHA--------- 349 (723)
T ss_dssp CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCS-------STTC---------
T ss_pred cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCC---------
Confidence 999999999999999999999999999999999999999999998888877776654211 0000
Q ss_pred HHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEc
Q 003127 222 LEILEFFAIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACIC 301 (845)
Q Consensus 222 ~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~ 301 (845)
.+...+..++++++++|||+|++++|+++..+..+++++|+++|+++++|+||++|++|||||||||+|+|+|.+++..
T Consensus 350 -~~~~~~~~~i~vlvia~P~aL~la~p~a~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~ 428 (723)
T 3j09_A 350 -PLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPL 428 (723)
T ss_dssp -TTCCSHHHHHHHHHHHSCTTHHHHHHHHHHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEES
T ss_pred -cHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeC
Confidence 1223466788999999999999999999999999999999999999999999999999999999999999999998865
Q ss_pred CeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEE
Q 003127 302 EEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVK 381 (845)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~ 381 (845)
+.. ..+.+..+..... .+.||.+.|+++++.+.+......
T Consensus 429 ~~~-------------------~~~~l~~aa~~e~-------------~s~hP~~~Ai~~~a~~~~~~~~~~-------- 468 (723)
T 3j09_A 429 NGD-------------------ERELLRLAAIAER-------------RSEHPIAEAIVKKALEHGIELGEP-------- 468 (723)
T ss_dssp SSC-------------------HHHHHHHHHHHHT-------------TCCSHHHHHHHHHHHHTTCCCCSC--------
T ss_pred CCC-------------------HHHHHHHHHHHhc-------------cCCCchhHHHHHHHHhcCCCcCCc--------
Confidence 311 1222222222211 157999999999999887653211
Q ss_pred EecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeec
Q 003127 382 VEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI 461 (845)
Q Consensus 382 ~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i 461 (845)
.+|++...+ ++.. ..+.+|+++.+.+.. . +.. +.+.+..++++++|+|++++|+
T Consensus 469 -~~~~~~~g~-g~~~-------~~~~~g~~~~~~~~~--------~--~~~----~~~~~~~~~~~~~g~~~~~va~--- 522 (723)
T 3j09_A 469 -EKVEVIAGE-GVVA-------DGILVGNKRLMEDFG--------V--AVS----NEVELALEKLEREAKTAVIVAR--- 522 (723)
T ss_dssp -CCCEEETTT-EEEE-------TTEEEECHHHHHHTT--------C--CCC----HHHHHHHHHHHTTTCEEEEEEE---
T ss_pred -cceEEecCC-ceEE-------EEEEECCHHHHHhcC--------C--Ccc----HHHHHHHHHHHhcCCeEEEEEE---
Confidence 112211111 0100 124568876654322 1 111 3466778899999999999984
Q ss_pred CCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCccccc
Q 003127 462 GNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFRE 541 (845)
Q Consensus 462 ~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~ 541 (845)
|++++|+++++|++|++++++|++|+++|++++|+|||+..++.++++++|+..
T Consensus 523 -------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~~------------- 576 (723)
T 3j09_A 523 -------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL------------- 576 (723)
T ss_dssp -------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE-------------
T ss_pred -------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCcE-------------
Confidence 578999999999999999999999999999999999999999999999999974
Q ss_pred CCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccC
Q 003127 542 KSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD 621 (845)
Q Consensus 542 ~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~ 621 (845)
+++++.|++|.++++.++++ +.|+|+|||.||+|||++||+||||| +|+|.++++||+++.++
T Consensus 577 --------------~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~al~~A~vgiamg-~g~~~a~~~AD~vl~~~ 639 (723)
T 3j09_A 577 --------------VIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRD 639 (723)
T ss_dssp --------------EECSCCTTCHHHHHHHHTTT--CCEEEEECSSTTHHHHHHSSEEEECC-CCSCCSSCCSSEECSSC
T ss_pred --------------EEccCCHHHHHHHHHHHhcC--CeEEEEECChhhHHHHhhCCEEEEeC-CCcHHHHHhCCEEEeCC
Confidence 89999999999999999976 78999999999999999999999999 99999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 622 NFSTIVTVAKWGRSVYINIQKFVQFQLTVNVVALIVNFS 660 (845)
Q Consensus 622 ~~~~i~~~i~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 660 (845)
+++++.+++++||++++|+++++.|++.+|++.+.+...
T Consensus 640 ~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 678 (723)
T 3j09_A 640 DLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAG 678 (723)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997776653
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-29 Score=266.27 Aligned_cols=260 Identities=23% Similarity=0.353 Sum_probs=194.6
Q ss_pred HHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHH
Q 003127 253 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 332 (845)
Q Consensus 253 ~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 332 (845)
.++.+++++|+++|+.+++|.++++++||||||||||+|+|.+.++. +. ++..+...
T Consensus 4 ~a~~~~~~~gil~k~~~~le~l~~i~~v~fDktGTLT~g~~~v~~~~--~~------------------~~~l~~~~--- 60 (263)
T 2yj3_A 4 SLYEKMLHKGMIIKNSNVYEKIKEIDTIIFEKTGTLTYGTPIVTQFI--GD------------------SLSLAYAA--- 60 (263)
Confidence 35678999999999999999999999999999999999999998764 00 01111100
Q ss_pred HhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHH
Q 003127 333 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASE 412 (845)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~ 412 (845)
.. ...+.||...|+.++++..+....... .|.. ..+.+....++|...
T Consensus 61 ------~~-------e~~s~hp~a~ai~~~~~~~g~~~~~~~---------~~~~----------~~G~g~~~~~~~~~~ 108 (263)
T 2yj3_A 61 ------SV-------EALSSHPIAKAIVKYAKEQGVKILEVK---------DFKE----------ISGIGVRGKISDKII 108 (263)
Confidence 00 122678999999988776554311100 0000 001111111111100
Q ss_pred HHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChhH
Q 003127 413 IILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGV 492 (845)
Q Consensus 413 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~ 492 (845)
. +... .+|.+ +.+ ..+..+.|.+.++|+++|++
T Consensus 109 ~-----------------~G~~-------------~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~g~ 141 (263)
T 2yj3_A 109 E-----------------VKKA-------------ENNND-IAV----------------YINGEPIASFNISDVPRPNL 141 (263)
Confidence 0 0000 01222 111 23456789999999999999
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHH
Q 003127 493 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 572 (845)
Q Consensus 493 ~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 572 (845)
.+++++|+++|++++++||++...+..+++++|+.. +|....|+.|..+++.+
T Consensus 142 ~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~p~~k~~~~~~l 194 (263)
T 2yj3_A 142 KDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQE---------------------------YYSNLSPEDKVRIIEKL 194 (263)
Confidence 999999999999999999999999999999999864 66677799999999999
Q ss_pred HhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHH
Q 003127 573 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKF 643 (845)
Q Consensus 573 ~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~ 643 (845)
+.. ++.++|+|||.||++|++.||+|+++| ++.+.+++.||+++.++++..+.++++.+|++++++++|
T Consensus 195 ~~~-~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~~~~~ad~v~~~~~l~~l~~~l~~~r~~~~~i~~n 263 (263)
T 2yj3_A 195 KQN-GNKVLMIGDGVNDAAALALADVSVAMG-NGVDISKNVADIILVSNDIGTLLGLIKNRKRLSNAIPSN 263 (263)
Confidence 987 789999999999999999999999999 788888999999998888999999999999999999875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-25 Score=235.55 Aligned_cols=278 Identities=30% Similarity=0.417 Sum_probs=201.2
Q ss_pred HHHHHHhcCCceeecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHH
Q 003127 253 FAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSI 332 (845)
Q Consensus 253 ~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 332 (845)
.+.++++++|+++|+++++|+++++++||||||||||.+.+.+.+++..+. ++ .+.+..+.
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~-----------------~~--~~~l~~~~ 68 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG-----------------DE--RELLRLAA 68 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS-----------------CH--HHHHHHHH
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC-----------------CH--HHHHHHHH
Confidence 366889999999999999999999999999999999999999988766432 01 12222221
Q ss_pred HhcCCceEEecCCCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeE--EEEEeCc
Q 003127 333 FNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGF--RVHCKGA 410 (845)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~--~~~~kGa 410 (845)
... ..+.||.+.|+.++++..|...... +....+ .+.+. ..+.+|.
T Consensus 69 ~~e-------------~~s~hp~~~a~~~~~~~~g~~~~~~----~~~~~~---------------~G~~~~~~~~~~g~ 116 (287)
T 3a1c_A 69 IAE-------------RRSEHPIAEAIVKKALEHGIELGEP----EKVEVI---------------AGEGVVADGILVGN 116 (287)
T ss_dssp HHT-------------TTCCSHHHHHHHHHHHHTTCCCCCC----SCEEEE---------------TTTEEEETTEEEEC
T ss_pred HHh-------------hcCCCHHHHHHHHHHHhcCCCcccc----ccceee---------------cCCCeEEEEEEECC
Confidence 111 1267999999999998887642110 001111 01111 1133465
Q ss_pred HHHHHHhchhccccCCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCCh
Q 003127 411 SEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 490 (845)
Q Consensus 411 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~ 490 (845)
++.+-+. +. +.+ +.+.+..+.+..+|.+++.+++ +..+.+.+..++++.|
T Consensus 117 ~~~~~~~--------~~--~~~----~~~~~~~~~~~~~g~~~i~~~~----------------d~~~~~~~~~~~~~~~ 166 (287)
T 3a1c_A 117 KRLMEDF--------GV--AVS----NEVELALEKLEREAKTAVIVAR----------------NGRVEGIIAVSDTLKE 166 (287)
T ss_dssp HHHHHHT--------TC--CCC----HHHHHHHHHHHHTTCEEEEEEE----------------TTEEEEEEEEECCBCT
T ss_pred HHHHHhc--------CC--Ccc----HHHHHHHHHHHhCCCeEEEEEE----------------CCEEEEEEEeccccch
Confidence 4433221 11 111 1244556778889999988874 3468888889999999
Q ss_pred hHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHH
Q 003127 491 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVK 570 (845)
Q Consensus 491 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~ 570 (845)
++.++++.|+++|+++.++||++...+..+++.+|+.. .|....|..|...++
T Consensus 167 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~f~~i~~~~K~~~~~ 219 (287)
T 3a1c_A 167 SAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------VIAEVLPHQKSEEVK 219 (287)
T ss_dssp THHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCTTCHHHHHH
T ss_pred hHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCce---------------------------eeeecChHHHHHHHH
Confidence 99999999999999999999999999999999999864 556667889999999
Q ss_pred HHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHH
Q 003127 571 HLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQ 641 (845)
Q Consensus 571 ~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~ 641 (845)
.++.. +.++++||+.||++|.+.||++++++ ++.+..+..||+++.++++..+.++++.+|.++++++
T Consensus 220 ~l~~~--~~~~~vGDs~~Di~~a~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 220 KLQAK--EVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHTTT--CCEEEEECTTTCHHHHHHSSEEEEEC-CCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHhcC--CeEEEEECCHHHHHHHHHCCeeEEeC-CCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 99876 77899999999999999999999999 6777777889999988889999999999999998875
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=198.00 Aligned_cols=108 Identities=27% Similarity=0.381 Sum_probs=98.6
Q ss_pred HHHhhhhcCCeeEEEECCeEEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcccccCCCCeEEec
Q 003127 56 KDLDREKKKITVQVARNGFRRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPVNVNALNPFLLSG 135 (845)
Q Consensus 56 ~~l~~~~~~~~~~V~r~g~~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~~k~~~~~~v~~G 135 (845)
+++.+ ..+.+++|+|||+++++++++|+|||+|.+++||+|||||++++|+ +.||||+|||||.|+.|..+ +.+|+|
T Consensus 4 ~~L~~-l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~g~-~~vdeS~LTGEs~pv~k~~g-~~v~aG 80 (113)
T 2hc8_A 4 KKLVG-LQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGE-SYVDESMISGEPVPVLKSKG-DEVFGA 80 (113)
T ss_dssp HHHHH-HSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEEECC-EEEECHHHHCCSSCEEECTT-CEECTT
T ss_pred HHHhc-CCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEce-EEEEccccCCCCccEEECCC-CEEEeC
Confidence 34443 4577899999999999999999999999999999999999999997 79999999999999999865 469999
Q ss_pred cEEEeceEEEEEEEEeecchhhHHHHhhccC
Q 003127 136 TKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 166 (845)
Q Consensus 136 t~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 166 (845)
|.+.+|.++++|+++|.+|.+|+|.+++.++
T Consensus 81 t~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 81 TINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp CEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred CEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 9999999999999999999999999887653
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=221.35 Aligned_cols=276 Identities=26% Similarity=0.366 Sum_probs=191.2
Q ss_pred eecchhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecC
Q 003127 265 VRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGE 344 (845)
Q Consensus 265 vk~~~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 344 (845)
+|+++++|.+++++.|+||++||||.|+|++.++...+.. ........ .. ...
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~----------------~~~~~~~~-~~--~~~-------- 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS----------------EDELLQIA-AS--LEA-------- 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC----------------HHHHHHHH-HH--HHT--------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC----------------HHHHHHHH-HH--hhc--------
Confidence 5889999999999999999999999999999998765430 01111111 11 111
Q ss_pred CCceEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhcccc
Q 003127 345 GNKTEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNS 424 (845)
Q Consensus 345 ~~~~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~ 424 (845)
...+|...++.+.+...|..... .+....++- +.....+ ++. .+..|.++.+......
T Consensus 54 -----~s~~~~~~a~~~~~~~~g~~~~~----~~~~~~~~g----~~~~~~~---~~~--~~~~~~~~~~~~~~~~---- 111 (280)
T 3skx_A 54 -----RSEHPIAAAIVEEAEKRGFGLTE----VEEFRAIPG----KGVEGIV---NGR--RYMVVSPGYIRELGIK---- 111 (280)
T ss_dssp -----TCCSHHHHHHHHHHHHTTCCCCC----CEEEEEETT----TEEEEEE---TTE--EEEEECHHHHHHTTCC----
T ss_pred -----cCCCHHHHHHHHHHHhcCCCCCC----ccceeecCC----CEEEEEE---CCE--EEEEecHHHHHHcCCC----
Confidence 14578888999988887754221 111111111 1111111 111 1223555544332211
Q ss_pred CCceecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCChhHHHHHHHHHHcCC
Q 003127 425 NGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGI 504 (845)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi 504 (845)
.. +...++...+.+.+..+ .+..++|.+.+.++++|++.++++.|++.|+
T Consensus 112 ------~~--------~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~ 161 (280)
T 3skx_A 112 ------TD--------ESVEKLKQQGKTVVFIL----------------KNGEVSGVIALADRIRPESREAISKLKAIGI 161 (280)
T ss_dssp ------CC--------TTHHHHHTTTCEEEEEE----------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTC
T ss_pred ------ch--------HHHHHHHhCCCeEEEEE----------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCC
Confidence 01 12334555665555444 2456889999999999999999999999999
Q ss_pred EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEc
Q 003127 505 TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTG 584 (845)
Q Consensus 505 ~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~G 584 (845)
++.++||++...+..+++.+|+.. .|....|.+|...++.+.+. . .++++|
T Consensus 162 ~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~f~~~~~~~k~~~~k~~~~~-~-~~~~vG 212 (280)
T 3skx_A 162 KCMMLTGDNRFVAKWVAEELGLDD---------------------------YFAEVLPHEKAEKVKEVQQK-Y-VTAMVG 212 (280)
T ss_dssp EEEEECSSCHHHHHHHHHHHTCSE---------------------------EECSCCGGGHHHHHHHHHTT-S-CEEEEE
T ss_pred EEEEEeCCCHHHHHHHHHHcCChh---------------------------HhHhcCHHHHHHHHHHHHhc-C-CEEEEe
Confidence 999999999999999999999864 66777889999999999887 3 568999
Q ss_pred CCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 585 DGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLT 649 (845)
Q Consensus 585 Dg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~~i~~~i~~~l~ 649 (845)
|+.||++|++.||+|++|| ++.+..++.||+++..++++++.++++.+|..+.++++++.|++.
T Consensus 213 D~~nDi~~~~~Ag~~va~~-~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 213 DGVNDAPALAQADVGIAIG-AGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp CTTTTHHHHHHSSEEEECS-CCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred CCchhHHHHHhCCceEEec-CCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999 888888999999999999999999999999999999999988764
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-24 Score=194.05 Aligned_cols=114 Identities=25% Similarity=0.380 Sum_probs=100.0
Q ss_pred HHHHHHHHHhhhhcCCeeEEEECCe------EEEEecCCcCCCcEEEEcCCCeeeccEEEEeeCceeEecccCCCCCCcc
Q 003127 50 KQSLQFKDLDREKKKITVQVARNGF------RRKISIYDLLPGDIVHLCMGDQVPADGLFVSGFSVLINESSLTGESEPV 123 (845)
Q Consensus 50 ~~~~~~~~l~~~~~~~~~~V~r~g~------~~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~~~~Vdes~LtGEs~p~ 123 (845)
+.++..+++.+ ..+.+++|+|+|+ ++++++++|+|||+|.+++||+|||||+|++|+. .||||+|||||.|+
T Consensus 4 ka~~~l~~L~~-l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~g~~-~vdeS~LTGEs~pv 81 (124)
T 2kij_A 4 TMSEALAKLIS-LQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS-MVDESLITGEAMPV 81 (124)
T ss_dssp --CCHHHHHHH-TCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEECSCCC-EEECTTTTCCSSCE
T ss_pred HHHHHHHHHhc-cCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEEEccE-EEEeccccCCCccE
Confidence 34445555654 4678999999764 6899999999999999999999999999999985 99999999999999
Q ss_pred cccCCCCeEEeccEEEeceEEEEEEEEeecchhhHHHHhhccC
Q 003127 124 NVNALNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATLSEG 166 (845)
Q Consensus 124 ~k~~~~~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 166 (845)
.|..+ +.+|+||.+.+|.+.++|++||.+|.+|+|.+++.++
T Consensus 82 ~k~~g-~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 82 AKKPG-STVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp ECCTT-EEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred EeCCC-CEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 99865 5799999999999999999999999999999988764
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.8e-20 Score=177.45 Aligned_cols=135 Identities=21% Similarity=0.297 Sum_probs=114.9
Q ss_pred cCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceec
Q 003127 351 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 430 (845)
Q Consensus 351 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~ 430 (845)
.+||+|.|+++++...+ ....+..++++..+||+|.||||+++++.+++++++++|||||.|+++|+.+. .+|...|
T Consensus 32 ~~n~~d~Ail~~~~~~~--~~~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~ 108 (170)
T 3gwi_A 32 LKNLLDTAVLEGTDEES--ARSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVP 108 (170)
T ss_dssp CCCHHHHHHHHTSCHHH--HHHHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEE-ETTEEEE
T ss_pred CCChHHHHHHHHHHhcC--hhhhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHh-cCCCccc
Confidence 57999999999875433 23446789999999999999999999998777889999999999999999764 5888899
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCC
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM 488 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l 488 (845)
++++.++.+.+..++|+++|+|||++|||.++..........|+|++|+|++++-|.-
T Consensus 109 l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~~~~~~E~~L~f~G~~g~~~~~ 166 (170)
T 3gwi_A 109 LDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDHH 166 (170)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSCCCGGGSCSEEEEEEEEEEC--
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccccCccccCCcEEEehhcccccc
Confidence 9999999999999999999999999999999875432223468999999999998853
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.76 E-value=3.5e-20 Score=197.88 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=113.2
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc--CCeeEEEEeCh
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMARSSP 562 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~--~~~~v~~~~~p 562 (845)
.++++|+++++++.|+++|++++|+||+...+++++++++|+..++..+...... .+++.+...+ +....+++..|
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~--~~~~~~~~~~~~~~i~~~~k~~~ 216 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMD--FDENGVLKGFKGELIHVFNKHDG 216 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEE--ECTTSBEEEECSSCCCTTCHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEE--EcccceeEeccccccchhhcccH
Confidence 4789999999999999999999999999999999999999998765444322111 1111111111 11224556677
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHH---hCCeeEEeCC------CCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALH---EADIGLAMGI------AGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~---~A~vgIamg~------~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...+..+++. ++.|+|+|||.||+||++ .||+|||||. ++.+.++++||+|+.+|++..++.+|.+
T Consensus 217 ~~k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~il~ 294 (297)
T 4fe3_A 217 ALKNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNSILQ 294 (297)
T ss_dssp HHTCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHHHHH
T ss_pred HHHHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHHHHH
Confidence 8888888888877 889999999999999955 9999999994 5677789999999999999999988643
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1e-13 Score=141.28 Aligned_cols=146 Identities=20% Similarity=0.182 Sum_probs=110.1
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--eCccc-ccC--------------
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGPEF-REK-------------- 542 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i--~g~~~-~~~-------------- 542 (845)
+.++++++.++|++|+++|++++++|||+...+..+++++|+..+ ++ .+. +|+.+ ...
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999999998642 11 122 12222 000
Q ss_pred -----------------------CHHHHh---hhcCCeeEE-----EEeCh--hcHHHHHHHHHhhcC---CEEEEEcCC
Q 003127 543 -----------------------SDEELS---KLIPKIQVM-----ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDG 586 (845)
Q Consensus 543 -----------------------~~~~~~---~~~~~~~v~-----~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg 586 (845)
..+.+. +.+ ...+. ....| .+|...++.+.++++ +.++++||+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~ 178 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESR-GFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDS 178 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTT-TEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhc-CEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCc
Confidence 011111 111 22222 12223 789999999988755 578999999
Q ss_pred ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 587 ~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.||++|++.||+|+||| |+.+.+|+.||+++.+++.+|+.+++++
T Consensus 179 ~nD~~m~~~ag~~va~~-n~~~~~k~~a~~v~~~~~~~Gv~~~l~~ 223 (227)
T 1l6r_A 179 NNDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 223 (227)
T ss_dssp GGGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred HHhHHHHHHcCceEEec-CchHHHHHhCCEEecCCCCcHHHHHHHH
Confidence 99999999999999999 8899999999999999999999998863
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.46 E-value=7.7e-14 Score=137.92 Aligned_cols=127 Identities=17% Similarity=0.232 Sum_probs=107.9
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHh
Q 003127 495 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 574 (845)
Q Consensus 495 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 574 (845)
+++.|+++|+++.++||++...+..+++++|+.. .+... .+|...++.+.+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~---------------------------~f~~~--~~K~~~~~~~~~ 104 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH---------------------------LFQGR--EDKLVVLDKLLA 104 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------HhcCc--CChHHHHHHHHH
Confidence 9999999999999999999999999999999964 33322 678888888877
Q ss_pred hcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCCh----hHHHHHHHHHHHHHHHHHHHHHHH
Q 003127 575 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNF----STIVTVAKWGRSVYINIQKFVQFQ 647 (845)
Q Consensus 575 ~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~----~~i~~~i~~gR~~~~~i~~~i~~~ 647 (845)
++| +.++++||+.||++|++.||++++|+ ++.+.+++.||+++.+++. ..+.+.+...|..+.++++++.|.
T Consensus 105 ~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~G~~~~l~~~l~~~~~~~~~~~~~~~~~ 183 (189)
T 3mn1_A 105 ELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAASFVREHAHGITRAQGGEGAAREFCELILSAQGNLEAAHSVYLEG 183 (189)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHTTSTT
T ss_pred HcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHccCcHHHHHHHHhcc
Confidence 655 67999999999999999999999999 8899999999999988754 446667778999999999999998
Q ss_pred HHHH
Q 003127 648 LTVN 651 (845)
Q Consensus 648 l~~n 651 (845)
+.+|
T Consensus 184 ~~~~ 187 (189)
T 3mn1_A 184 HHHH 187 (189)
T ss_dssp C---
T ss_pred cccc
Confidence 8776
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.42 E-value=9.3e-13 Score=138.88 Aligned_cols=146 Identities=26% Similarity=0.334 Sum_probs=107.5
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC-------Cc-eee---eCccccc--C----------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-------NG-IAI---EGPEFRE--K---------- 542 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~-------~~-~~i---~g~~~~~--~---------- 542 (845)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+... ++ .+. .+..+.. +
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~ 100 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYE 100 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHH
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHH
Confidence 46889999999999999999999999999999999999997311 11 011 0000000 0
Q ss_pred -----------------------------------------------------------CHH-------HHhhhc-CCee
Q 003127 543 -----------------------------------------------------------SDE-------ELSKLI-PKIQ 555 (845)
Q Consensus 543 -----------------------------------------------------------~~~-------~~~~~~-~~~~ 555 (845)
..+ .+.+.+ ....
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 4dw8_A 101 CARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKIN 180 (279)
T ss_dssp HHHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCE
T ss_pred HHHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEE
Confidence 000 111111 1122
Q ss_pred EE------EEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChh
Q 003127 556 VM------ARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFS 624 (845)
Q Consensus 556 v~------~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~ 624 (845)
++ ....| .+|...++.+.+++| +.++++||+.||++|++.||+||||| |+.+.+|++||+++.+++.+
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~ 259 (279)
T 4dw8_A 181 VFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMG-NAQEPVKKAADYITLTNDED 259 (279)
T ss_dssp EEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCGGGT
T ss_pred EEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcC-CCcHHHHHhCCEEcCCCCCc
Confidence 21 12223 479999999988766 56899999999999999999999999 89999999999999999999
Q ss_pred HHHHHHHH
Q 003127 625 TIVTVAKW 632 (845)
Q Consensus 625 ~i~~~i~~ 632 (845)
|++++|++
T Consensus 260 Gv~~~i~~ 267 (279)
T 4dw8_A 260 GVAEAIER 267 (279)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998864
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1e-12 Score=128.77 Aligned_cols=132 Identities=16% Similarity=0.170 Sum_probs=108.2
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHH
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 567 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 567 (845)
+.+++.++|++|+++|++++++||++...+..+++++|+.. .+.. ...|..
T Consensus 36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~---------------------------~~~~--~k~k~~ 86 (180)
T 1k1e_A 36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFLG--KLEKET 86 (180)
T ss_dssp EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEES--CSCHHH
T ss_pred eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce---------------------------eecC--CCCcHH
Confidence 45678899999999999999999999999999999999864 2222 256777
Q ss_pred HHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH-HHH---HHHHHHHHHH
Q 003127 568 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV-TVA---KWGRSVYINI 640 (845)
Q Consensus 568 ~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~-~~i---~~gR~~~~~i 640 (845)
.++.+.++++ +.++++||+.||++|++.||++++|+ ++.+.+++.||+++.+++..++. +++ ...|..++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~~~~~l~~~~~~~~~ 165 (180)
T 1k1e_A 87 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSVF 165 (180)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHHH
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccHHHHhhCCEEecCCCCCcHHHHHHHHHHHhcCchhhh
Confidence 7777766545 67999999999999999999999999 88999999999999988877777 333 3456667777
Q ss_pred HHHHHHHHH
Q 003127 641 QKFVQFQLT 649 (845)
Q Consensus 641 ~~~i~~~l~ 649 (845)
+.++.|..+
T Consensus 166 ~~~~~~~~~ 174 (180)
T 1k1e_A 166 DTAQGFLKS 174 (180)
T ss_dssp HCHHHHHHH
T ss_pred hhccchhhh
Confidence 777776654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.39 E-value=1.2e-12 Score=138.78 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=63.8
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+|+||| |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 201 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~s~~edGv~~~i~~ 272 (290)
T 3dnp_A 201 VSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMG-NAVPEIKRKADWVTRSNDEQGVAYMMKE 272 (290)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEec-CCcHHHHHhcCEECCCCCccHHHHHHHH
Confidence 579999999988876 57899999999999999999999999 9999999999999999999999999864
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.38 E-value=2e-12 Score=136.75 Aligned_cols=146 Identities=21% Similarity=0.257 Sum_probs=106.1
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eee--eCcccc--c---------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAI--EGPEFR--E--------------- 541 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i--~g~~~~--~--------------- 541 (845)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+... ++ .+. .++.+. .
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 46899999999999999999999999999999999999998521 11 000 000000 0
Q ss_pred ------------------------------------------------------CCHHH-------HhhhcC-CeeEE--
Q 003127 542 ------------------------------------------------------KSDEE-------LSKLIP-KIQVM-- 557 (845)
Q Consensus 542 ------------------------------------------------------~~~~~-------~~~~~~-~~~v~-- 557 (845)
...+. +.+.+. ...+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 01111 111111 11111
Q ss_pred ----EEe--ChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCE--EeccCChhHH
Q 003127 558 ----ARS--SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV--IILDDNFSTI 626 (845)
Q Consensus 558 ----~~~--~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~--v~~~~~~~~i 626 (845)
... ...+|...++.+.+++| +.++++||+.||++|++.||+||||| |+.+.+|++||+ ++.+++.+|+
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~-Na~~~vk~~A~~~~v~~sn~edGv 275 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMA-NAHQRLKDLHPELEVIGSNADDAV 275 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCTTSEECCCGGGTHH
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEcc-CCCHHHHHhCCCCEecccCCcchH
Confidence 112 22569999999988877 57999999999999999999999999 999999999984 7889999999
Q ss_pred HHHHHH
Q 003127 627 VTVAKW 632 (845)
Q Consensus 627 ~~~i~~ 632 (845)
+++|++
T Consensus 276 a~~i~~ 281 (285)
T 3pgv_A 276 PRYLRK 281 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998864
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.38 E-value=5.9e-13 Score=140.43 Aligned_cols=69 Identities=26% Similarity=0.375 Sum_probs=52.3
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+||||| |+.+.+|++||+++.+++.+|++++|++
T Consensus 196 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~e~Gv~~~i~~ 267 (279)
T 3mpo_A 196 ASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMG-NAIDEVKEAAQAVTLTNAENGVAAAIRK 267 (279)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC------CHHHHHC-
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeecc-CCCHHHHHhcceeccCCCccHHHHHHHH
Confidence 469999999998876 57999999999999999999999999 8999999999999999999999998753
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.5e-12 Score=137.61 Aligned_cols=69 Identities=22% Similarity=0.195 Sum_probs=63.8
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.++++||+.||++|++.||+||||| |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 210 ~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~s~~edGv~~~l~~ 281 (283)
T 3dao_A 210 VSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAVS-NARQEVIAAAKHTCAPYWENGVLSVLKS 281 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHHSSEEECCGGGTHHHHHHHH
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEcC-CCCHHHHHhcCeECCCCCCChHHHHHHH
Confidence 569999999998877 57999999999999999999999999 9999999999999999999999998864
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.35 E-value=7.3e-12 Score=130.35 Aligned_cols=69 Identities=29% Similarity=0.262 Sum_probs=62.7
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.++++||+.||++|++.||+||||| |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 182 ~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~dGva~~i~~ 253 (258)
T 2pq0_A 182 GSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMG-NAHEEVKRVADFVTKPVDKEGIWYGLKQ 253 (258)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEET-TCCHHHHHTCSEEECCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeC-CCcHHHHHhCCEEeCCCCcchHHHHHHH
Confidence 478888999888766 57899999999999999999999999 8999999999999999999999998864
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.8e-12 Score=123.33 Aligned_cols=116 Identities=18% Similarity=0.201 Sum_probs=94.5
Q ss_pred CceEEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH--HcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 474 EGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR--ECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 474 ~~~~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~--~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
.+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 29 ~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------ 76 (168)
T 3ewi_A 29 GDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------ 76 (168)
T ss_dssp SSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------
T ss_pred CCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------
Confidence 34456666666665 3899999999999999999 67888888 55552
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
++ ..+.+|...++.+.+++| +.++++||+.||++|++.||+++||+ ++.+.+++.||+++.+++.+|++.
T Consensus 77 ----~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~~k~~Ad~v~~~~~~~G~~~ 149 (168)
T 3ewi_A 77 ----TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSGAQKAVGYICKCSGGRGAIR 149 (168)
T ss_dssp ----EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHHHHTTCSEECSSCTTTTHHH
T ss_pred ----EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHHHHHhCCEEeCCCCCccHHH
Confidence 11 123579889988887755 57999999999999999999999999 899999999999999888888544
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.2e-12 Score=141.94 Aligned_cols=148 Identities=14% Similarity=0.149 Sum_probs=110.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-----eC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----SS 561 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-----~~ 561 (845)
++.|++.+.++.|+++|+++.++||+....+..+.+++|+.......+ ... +..+..+ ..
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l-----~~~----------d~~~tg~~~~~~~~ 242 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTL-----EIV----------SGKLTGQVLGEVVS 242 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE-----EEE----------TTEEEEEEESCCCC
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeee-----Eee----------CCeeeeeecccccC
Confidence 689999999999999999999999999999999999999863111000 000 0001111 12
Q ss_pred hhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHH
Q 003127 562 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 638 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~ 638 (845)
+..|...++.+.+++| +.++++|||.||++|++.||+|++| ++.+.+++.||+++..++++++.++++......+
T Consensus 243 ~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~ 320 (335)
T 3n28_A 243 AQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQ 320 (335)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhh
Confidence 3456666666665544 6799999999999999999999999 6889999999999999999999999988887788
Q ss_pred HHHHHHHHHHHHH
Q 003127 639 NIQKFVQFQLTVN 651 (845)
Q Consensus 639 ~i~~~i~~~l~~n 651 (845)
+++.++.+.+.+|
T Consensus 321 r~~~~~~~~~~~~ 333 (335)
T 3n28_A 321 KLSWKSKEGHHHH 333 (335)
T ss_dssp CCCCC--------
T ss_pred hhccccccccccc
Confidence 8999999988876
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=2.9e-12 Score=134.18 Aligned_cols=69 Identities=29% Similarity=0.358 Sum_probs=64.1
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.++++||+.||++|++.||+||||| |+.+.+|++||+++.+++.+|+.++|++
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 264 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASEKVQSVADFVTDTVDNSGLYKALKH 264 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHTCSEECCCTTTTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcHHHHHhcCEeeCCCCcCHHHHHHHH
Confidence 689999999998876 56899999999999999999999999 9999999999999999999999999864
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=6.3e-12 Score=131.98 Aligned_cols=69 Identities=28% Similarity=0.307 Sum_probs=63.1
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+||||| |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 199 ~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~-na~~~~k~~A~~v~~~~~edGv~~~l~~ 270 (274)
T 3fzq_A 199 FHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAMK-NSHQQLKDIATSICEDIFDNGIYKELKR 270 (274)
T ss_dssp CSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEET-TSCHHHHHHCSEEECCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEec-CccHHHHHhhhheeCCCchhHHHHHHHH
Confidence 569999998888766 57899999999999999999999999 8999999999999999999999999864
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.30 E-value=6.3e-12 Score=134.31 Aligned_cols=70 Identities=21% Similarity=0.231 Sum_probs=64.2
Q ss_pred hhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 562 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
+.+|...++.+.+++| +.++++||+.||++|++.||+||||| |+.+.+|++||+++.+++.+|+.++|++
T Consensus 226 ~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~~~k~~Ad~v~~~~~edGv~~~l~~ 298 (304)
T 3l7y_A 226 GLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPKNVKAAANYQAKSNDESGVLDVIDN 298 (304)
T ss_dssp TCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCHHHHHhccEEcCCCCcchHHHHHHH
Confidence 3679999999988876 57999999999999999999999999 9999999999999999999999999863
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.28 E-value=1.4e-11 Score=121.82 Aligned_cols=106 Identities=18% Similarity=0.218 Sum_probs=90.8
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHH
Q 003127 493 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHL 572 (845)
Q Consensus 493 ~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 572 (845)
..+|+.|+++|+++.++||++...+..+++++|+.. +|... ..|...++.+
T Consensus 58 ~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~---------------------------~~~~~--k~k~~~~~~~ 108 (195)
T 3n07_A 58 GYGVKALMNAGIEIAIITGRRSQIVENRMKALGISL---------------------------IYQGQ--DDKVQAYYDI 108 (195)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------EECSC--SSHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------EeeCC--CCcHHHHHHH
Confidence 346999999999999999999999999999999864 33322 5677777777
Q ss_pred HhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHH
Q 003127 573 RTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 573 ~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
.+.++ +.++++||+.||++|++.||++++|+ ++.+.+++.||+++.+++.+|++.
T Consensus 109 ~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~~~~~~ad~v~~~~~~~G~~~ 166 (195)
T 3n07_A 109 CQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHPLLAQRANYVTHIKGGHGAVR 166 (195)
T ss_dssp HHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCHHHHHHCSEECSSCTTTTHHH
T ss_pred HHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHHHHHHhCCEEEcCCCCCCHHH
Confidence 76655 57899999999999999999999999 899999999999999888777543
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.1e-11 Score=117.64 Aligned_cols=105 Identities=19% Similarity=0.222 Sum_probs=90.9
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHh
Q 003127 495 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 574 (845)
Q Consensus 495 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 574 (845)
+++.|+++|+++.++||++...+..+++.+|+. + +.. ...|...++.+.+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~-----------------------~~~--~~~k~~~l~~~~~ 96 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----V-----------------------LHG--IDRKDLALKQWCE 96 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----E-----------------------EES--CSCHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----e-----------------------EeC--CCChHHHHHHHHH
Confidence 899999999999999999999999999999985 1 221 2668888888777
Q ss_pred hcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 575 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 575 ~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
++| +.++++||+.||++|++.||++++|+ ++.+.+++.||+++.+++.+++.+.+
T Consensus 97 ~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l 154 (176)
T 3mmz_A 97 EQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHDVVRGAARAVTTVPGGDGAIREI 154 (176)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHH
T ss_pred HcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhHHHHHhCCEEecCCCCCcHHHHH
Confidence 655 67899999999999999999999999 78999999999999998877766554
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.22 E-value=2.7e-11 Score=121.36 Aligned_cols=101 Identities=21% Similarity=0.219 Sum_probs=88.5
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHh
Q 003127 495 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 574 (845)
Q Consensus 495 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 574 (845)
+++.|+++|+++.++||++...+..+++++|+.. ++... .+|...++.+.+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~---------------------------~f~~~--k~K~~~l~~~~~ 134 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH---------------------------LYQGQ--SDKLVAYHELLA 134 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECSC--SSHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch---------------------------hhccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999964 33333 568888888777
Q ss_pred hcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH
Q 003127 575 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST 625 (845)
Q Consensus 575 ~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~ 625 (845)
++| +.++++||+.||++|++.||++++|+ ++.+.+++.||+++.+++..|
T Consensus 135 ~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~~~~~Ad~v~~~~~~~G 187 (211)
T 3ij5_A 135 TLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPLLLPKAHYVTRIKGGRG 187 (211)
T ss_dssp HHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTT
T ss_pred HcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHHHHhhCCEEEeCCCCCc
Confidence 655 67999999999999999999999999 788899999999998876665
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=4.6e-11 Score=126.04 Aligned_cols=69 Identities=26% Similarity=0.321 Sum_probs=62.1
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+|+||| |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 197 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~a~~v~~~~~~dGV~~~l~~ 268 (282)
T 1rkq_A 197 VNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNLEDGVAFAIEK 268 (282)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEec-CCcHHHHhhCCEEecCCCcchHHHHHHH
Confidence 479999999987755 47899999999999999999999999 8889999999999999999999998863
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.20 E-value=6e-11 Score=117.17 Aligned_cols=122 Identities=17% Similarity=0.118 Sum_probs=93.8
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe--ChhcHHHHHHHH
Q 003127 495 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS--SPMDKHTLVKHL 572 (845)
Q Consensus 495 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~--~p~~K~~~v~~l 572 (845)
+++.|+++|+++.++||++...+..+++.+|+.. ++... .|+....+++.+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~---------------------------~~~~~kpk~~~~~~~~~~~ 106 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH---------------------------YYKGQVDKRSAYQHLKKTL 106 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE---------------------------EECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc---------------------------ceeCCCChHHHHHHHHHHh
Confidence 6999999999999999999999999999999864 23222 233334444444
Q ss_pred HhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH----HHHHHHHHHHHHHHHHHH
Q 003127 573 RTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV----TVAKWGRSVYINIQKFVQ 645 (845)
Q Consensus 573 ~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~----~~i~~gR~~~~~i~~~i~ 645 (845)
.-. .+.++++||+.||++|++.||++++|+ ++.+.+++.||+++.+++.+++. +.+...|..+.++.+.+.
T Consensus 107 ~~~-~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~l~~~ll~~~~~~~~~~~~~~ 181 (191)
T 3n1u_A 107 GLN-DDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVPQVLEFADWRTERTGGRGAVRELCDLILNAQNKAELAITGYL 181 (191)
T ss_dssp TCC-GGGEEEEECSGGGHHHHHHSSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCC-HHHEEEECCCHHHHHHHHHCCCEEEeC-CccHHHHHhCCEEecCCCCCcHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 333 367999999999999999999999999 88999999999999988866644 344456666665554443
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.20 E-value=8.9e-11 Score=119.89 Aligned_cols=146 Identities=19% Similarity=0.222 Sum_probs=106.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeee-Ccccc----------------c--
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIE-GPEFR----------------E-- 541 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~-g~~~~----------------~-- 541 (845)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+..+ ++ .+.. ++.+. .
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 45789999999999999999999999999999999999987532 11 1111 11100 0
Q ss_pred ---------------------CCHHHHhhh---c-CCeeEE-----EEe--ChhcHHHHHHHHHhhcC---CEEEEEcCC
Q 003127 542 ---------------------KSDEELSKL---I-PKIQVM-----ARS--SPMDKHTLVKHLRTTLG---EVVAVTGDG 586 (845)
Q Consensus 542 ---------------------~~~~~~~~~---~-~~~~v~-----~~~--~p~~K~~~v~~l~~~~g---~~v~~~GDg 586 (845)
...+.+.+. + ....+. ... ....|...++.+.+++| +.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 011111111 1 112222 112 23579999998887655 568899999
Q ss_pred ccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 587 ~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.||++|++.||++++|+ ++.+..++.||+++.+++.+|+.+++++
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~~~~~~a~~v~~~~~e~Gv~~~l~~ 223 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYH 223 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEec-CCCHHHHhhCCEEecCCCcchHHHHHHH
Confidence 99999999999999999 8888889999999999888999988864
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.16 E-value=6.5e-11 Score=124.11 Aligned_cols=69 Identities=28% Similarity=0.296 Sum_probs=62.2
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+|+||| |+.+.+|+.||+++.+++.+|+.++|++
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~dGVa~~l~~ 261 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQA 261 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccHHHHHhCCeeCcCCCCChHHHHHHH
Confidence 578999999887766 57899999999999999999999999 8899999999999999999999998863
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.6e-10 Score=111.10 Aligned_cols=107 Identities=20% Similarity=0.246 Sum_probs=89.5
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHHh
Q 003127 495 SVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRT 574 (845)
Q Consensus 495 ~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 574 (845)
+++.|+++|+++.++||++...+..+++++|+.. .+... ..|...++.+.+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~---------------------------~~~~~--kpk~~~~~~~~~ 89 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDY---------------------------LFQGV--VDKLSAAEELCN 89 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSE---------------------------EECSC--SCHHHHHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCE---------------------------eeccc--CChHHHHHHHHH
Confidence 8999999999999999999999999999999864 22222 456666666665
Q ss_pred hcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH-HHHHHH
Q 003127 575 TLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST-IVTVAK 631 (845)
Q Consensus 575 ~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~-i~~~i~ 631 (845)
+++ +.++++||+.||++|++.||++++++ ++.+.+++.||+++.+++..+ +.++++
T Consensus 90 ~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~e~~~ 149 (164)
T 3e8m_A 90 ELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPFYIRRLSTIFLEKRGGEGVFREFVE 149 (164)
T ss_dssp HHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCHHHHTTCSSCCCCCTTTTHHHHHHH
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHHHHHHhCcEEeccCCCCcHHHHHHH
Confidence 544 57999999999999999999999999 889999999999999988776 555543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.10 E-value=7.5e-10 Score=117.74 Aligned_cols=69 Identities=25% Similarity=0.279 Sum_probs=62.3
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEec-cCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL-DDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~-~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+.+| +.++++||+.||++|++.||+|+||| |+.+.+++.||+++. +++.+|+.++|++
T Consensus 223 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~~~k~~a~~v~~~~~~~dGVa~~l~~ 295 (301)
T 2b30_A 223 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLKK 295 (301)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHHH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEc-CCcHHHHhhCCEEEccCCCCcHHHHHHHH
Confidence 479999999988766 47899999999999999999999999 889999999999999 9999999998863
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=3.3e-10 Score=116.69 Aligned_cols=69 Identities=14% Similarity=0.127 Sum_probs=61.6
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhc-------cCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES-------ADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~-------ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+|++|| |+.+.+|+. ||+++.+++.+|+.++|++
T Consensus 161 ~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~~~k~~a~~~~~~a~~v~~~~~~dGva~~i~~ 239 (244)
T 1s2o_A 161 SNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcHHHHHHHhcccccceeecCCcchhHHHHHHHH
Confidence 479999999988766 57899999999999999999999999 889988885 8899999999999998864
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.09 E-value=2.4e-10 Score=117.22 Aligned_cols=138 Identities=14% Similarity=0.168 Sum_probs=96.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-CCccCCc-eee-eCcc------ccc--C-------------
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-GILTDNG-IAI-EGPE------FRE--K------------- 542 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l-gi~~~~~-~~i-~g~~------~~~--~------------- 542 (845)
.+.+.+.++|++|+++| +++++|||++..+..+.+++ .+...++ .+. +|+. +.. +
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~ 101 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWVS 101 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHHh
Confidence 68899999999999999 99999999999998887765 1111122 111 1221 000 0
Q ss_pred ------------------------CHH---HHhhhc---CCeeEE-----EEeCh--hcHHHHHHHHHhhcCCEEEEEcC
Q 003127 543 ------------------------SDE---ELSKLI---PKIQVM-----ARSSP--MDKHTLVKHLRTTLGEVVAVTGD 585 (845)
Q Consensus 543 ------------------------~~~---~~~~~~---~~~~v~-----~~~~p--~~K~~~v~~l~~~~g~~v~~~GD 585 (845)
..+ .+.+.+ ....+. ....| .+|+..++.+.+++| ++++||
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g--via~GD 179 (239)
T 1u02_A 102 DFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP--AIIAGD 179 (239)
T ss_dssp HSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC--EEEEES
T ss_pred hCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC--eEEEeC
Confidence 000 000000 111111 12222 579999999999877 888999
Q ss_pred CccCHHHHHhC--CeeEEeCCCCcHHHHhccCEEecc-CChhHHHHHHHH
Q 003127 586 GTNDAPALHEA--DIGLAMGIAGTEVAKESADVIILD-DNFSTIVTVAKW 632 (845)
Q Consensus 586 g~ND~~ml~~A--~vgIamg~~~~~~ak~~ad~v~~~-~~~~~i~~~i~~ 632 (845)
+.||.+||+.| |+||||| |+ ++.||+++.+ ++.+++.++|++
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~-Na----~~~A~~v~~~~~~~~gV~~~l~~ 224 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVG-EG----ETHAKFHVADYIEMRKILKFIEM 224 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEES-SS----CCCCSEEESSHHHHHHHHHHHHH
T ss_pred CCccHHHHHHhhCCcEEEEC-CC----CCcceEEeCCCCCHHHHHHHHHH
Confidence 99999999999 9999999 66 6789999988 788999988864
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.06 E-value=4.4e-10 Score=117.54 Aligned_cols=68 Identities=32% Similarity=0.455 Sum_probs=61.2
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+|++|| ++.+..++.||+++.+++.+|+.++|+
T Consensus 189 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~i~ 259 (268)
T 1nf2_A 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (268)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEec-CCCHHHHhhCCEEEccCCcchHHHHHH
Confidence 479999999887655 56899999999999999999999999 888989999999999999999999875
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.04 E-value=4.1e-10 Score=112.57 Aligned_cols=130 Identities=19% Similarity=0.267 Sum_probs=93.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-eChhc
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-SSPMD 564 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-~~p~~ 564 (845)
.++.++++++++.++++|+++.++||+....+....+.+|+.......+ .... ... ...+... ..+..
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~-~~~~~~~~~~~~~ 143 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRL---IVKD-------GKL-TGDVEGEVLKENA 143 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEE---EEET-------TEE-EEEEECSSCSTTH
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeee---EEEC-------CEE-cCCcccCccCCcc
Confidence 3567899999999999999999999999998888889988753100000 0000 000 0000000 22457
Q ss_pred HHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHH
Q 003127 565 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 565 K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
|...+..+.+++| +.++++||+.||++|++.||++++|+ +.+..++.||+++.++++..+..
T Consensus 144 K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 144 KGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECSSCGGGGGG
T ss_pred HHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecchhHHHHHH
Confidence 8777777776555 56999999999999999999999997 56777889999998877776543
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.02 E-value=5.1e-10 Score=112.64 Aligned_cols=130 Identities=18% Similarity=0.159 Sum_probs=99.1
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE---EEE--e
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV---MAR--S 560 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v---~~~--~ 560 (845)
-++.|++.+.++.|+++|+++.++|+.....+....+.+|+...-..++...+ ..+ ++. .
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~~---------------~~~~~~~~~~~~ 138 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVEN---------------DALNGLVTGHMM 138 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET---------------TEEEEEEEESCC
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEeC---------------CEEEeeeccCCC
Confidence 35889999999999999999999999999999999999998642111111000 000 011 1
Q ss_pred ChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 561 SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
....|..+++.+.+++| +.++++||+.||++|++.||++++| ++.+..++.||+++.++++.++..+++.
T Consensus 139 ~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~ 211 (217)
T 3m1y_A 139 FSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEG 211 (217)
T ss_dssp STTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC---
T ss_pred CCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhcc
Confidence 24567777777766655 6789999999999999999999999 6788889999999999999998877643
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.01 E-value=2e-09 Score=113.77 Aligned_cols=69 Identities=32% Similarity=0.404 Sum_probs=61.7
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+.+| +.++++||+.||++|++.||+|+||+ ++.+..|+.||+++.+++.+|+.++|++
T Consensus 215 ~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-~~~~~~~~~a~~v~~~~~~dGVa~~i~~ 286 (288)
T 1nrw_A 215 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 286 (288)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEEc-CCCHHHHhhCceeecCCCcChHHHHHHH
Confidence 368888888888766 47899999999999999999999999 8899999999999999999999998863
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.00 E-value=1.1e-09 Score=122.27 Aligned_cols=137 Identities=20% Similarity=0.262 Sum_probs=108.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-----eC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----SS 561 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-----~~ 561 (845)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+.......+. + .+..+..+ ..
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~---~------------~dg~~tg~~~~~v~~ 320 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELE---I------------VDGTLTGRVVGPIID 320 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEE---E------------ETTEEEEEECSSCCC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEE---E------------eCCEEEeeEccCCCC
Confidence 7899999999999999999999999999999999999999631100000 0 00001111 12
Q ss_pred hhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHHHHHH
Q 003127 562 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYI 638 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR~~~~ 638 (845)
+..|..+++.+.+++| +.++++||+.||++|++.||+|+++ ++.+.+++.||+++..++++++..++..+|.-+.
T Consensus 321 ~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~ 398 (415)
T 3p96_A 321 RAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIE 398 (415)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHH
T ss_pred CcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHH
Confidence 5678888887777655 5789999999999999999999999 5788889999999999999999999887777665
Q ss_pred HH
Q 003127 639 NI 640 (845)
Q Consensus 639 ~i 640 (845)
+.
T Consensus 399 ~~ 400 (415)
T 3p96_A 399 AA 400 (415)
T ss_dssp HH
T ss_pred Hh
Confidence 44
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.97 E-value=2e-09 Score=103.14 Aligned_cols=112 Identities=13% Similarity=0.202 Sum_probs=89.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
.+.+++.+++++|+++|++++++||++...+..+.+.+|+.. .+.. +..|.
T Consensus 36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~---------------------------~~~~--~kp~~ 86 (162)
T 2p9j_A 36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE---------------------------IYTG--SYKKL 86 (162)
T ss_dssp EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE---------------------------EEEC--C--CH
T ss_pred eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh---------------------------hccC--CCCCH
Confidence 346788999999999999999999999999999999999863 2222 22344
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
..++.+.+.++ +.++++||+.||++|.+.||++++++ ++.+..++.||+++.+.+..++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~a~~v~~~~~~~g~~~ 150 (162)
T 2p9j_A 87 EIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVEEVRKVAVYITQRNGGEGALR 150 (162)
T ss_dssp HHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECSSCSSSSHHH
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccHHHHhhCCEEecCCCCCcHHH
Confidence 44444443333 57899999999999999999999998 788888889999999888878773
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.7e-09 Score=112.50 Aligned_cols=66 Identities=20% Similarity=0.233 Sum_probs=59.1
Q ss_pred hcHHHHHHHHHhhcC-----CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g-----~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|...++.+.+++| +.++++||+.||++|++.||+|+||| |+.+ + .|++++.+++.+|+.+++++
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~-~--~~~~~~~~~~~~gv~~~~~~ 245 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP-P--EGVLATPAPGPEGFRYAVER 245 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC-C--TTCEECSSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh-c--CCcEEeCCCCchHHHHHHHH
Confidence 689999999988876 67999999999999999999999999 7888 4 78899999999999988754
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-09 Score=113.91 Aligned_cols=145 Identities=16% Similarity=0.082 Sum_probs=79.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-C----Cce-ee-eC--c-----ccc--cCCHHH----
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT-D----NGI-AI-EG--P-----EFR--EKSDEE---- 546 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~-~----~~~-~i-~g--~-----~~~--~~~~~~---- 546 (845)
.+.+.+.++|++|+++|++++++|||+...+..+.+++|+.. + ++. +. .+ . .+. .++.+.
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i 105 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLV 105 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHH
Confidence 456788999999999999999999999999999999998753 1 222 22 22 1 000 011000
Q ss_pred ---Hhh-------------------------------hcC-------------------------CeeEE-----EEeCh
Q 003127 547 ---LSK-------------------------------LIP-------------------------KIQVM-----ARSSP 562 (845)
Q Consensus 547 ---~~~-------------------------------~~~-------------------------~~~v~-----~~~~p 562 (845)
+.+ ... ...+. ....|
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~leI~~ 185 (275)
T 1xvi_A 106 LNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLD 185 (275)
T ss_dssp HHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEEE
T ss_pred HHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHhhCeEEEECCceEEEec
Confidence 000 000 00110 01111
Q ss_pred --hcHHHHHHHHHhhcC----CE--EEEEcCCccCHHHHHhCCeeEEeCCCCc---HHHHhc--cC-EEeccCChhHHHH
Q 003127 563 --MDKHTLVKHLRTTLG----EV--VAVTGDGTNDAPALHEADIGLAMGIAGT---EVAKES--AD-VIILDDNFSTIVT 628 (845)
Q Consensus 563 --~~K~~~v~~l~~~~g----~~--v~~~GDg~ND~~ml~~A~vgIamg~~~~---~~ak~~--ad-~v~~~~~~~~i~~ 628 (845)
.+|...++.+.+.+| +. ++++||+.||++|++.||+||||+ |+. +.+++. || +++.+++.+|+++
T Consensus 186 ~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-n~~~~~~~~~~~~~a~~~v~~~~~~dGVa~ 264 (275)
T 1xvi_A 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK-GLNREGVHLHDEDPARVWRTQREGPEGWRE 264 (275)
T ss_dssp TTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC-CCC---------------------------
T ss_pred CCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEec-CCCccchhhccccCCceeEccCCCchHHHH
Confidence 468888888776544 35 899999999999999999999999 776 555553 79 8999999999998
Q ss_pred HHHH
Q 003127 629 VAKW 632 (845)
Q Consensus 629 ~i~~ 632 (845)
+|++
T Consensus 265 ~l~~ 268 (275)
T 1xvi_A 265 GLDH 268 (275)
T ss_dssp ----
T ss_pred HHHH
Confidence 8853
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.2e-09 Score=107.58 Aligned_cols=108 Identities=19% Similarity=0.219 Sum_probs=88.8
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573 (845)
Q Consensus 494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 573 (845)
.++++|+++|++++++||++...+..+++.+|+.. .+.. ...|...++.+.
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~---------------------------~~~~--~kpk~~~~~~~~ 110 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGITH---------------------------LYQG--QSNKLIAFSDLL 110 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCE---------------------------EECS--CSCSHHHHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCce---------------------------eecC--CCCCHHHHHHHH
Confidence 48999999999999999999999999999999863 2222 244666666666
Q ss_pred hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHH-HHHH
Q 003127 574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIV-TVAK 631 (845)
Q Consensus 574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~-~~i~ 631 (845)
+++| +.++++||+.||++|++.||++++++ ++.+.+++.||+++.+.+..+++ ++++
T Consensus 111 ~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~~~~~~ad~v~~~~~~~g~~~~~l~ 171 (188)
T 2r8e_A 111 EKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVCD 171 (188)
T ss_dssp HHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCTTTGGGSSEECSSCTTTTHHHHHHH
T ss_pred HHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCHHHHhcCCEEEeCCCCCcHHHHHHH
Confidence 5545 67999999999999999999999999 77888888999999888777766 5543
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-09 Score=113.76 Aligned_cols=69 Identities=30% Similarity=0.365 Sum_probs=60.8
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
..|...++.+.+++| +.++++||+.||++|++.||+|++|+ |+.+..++.||+++.+++.+|+.+++++
T Consensus 186 ~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~-n~~~~~~~~a~~v~~~~~~dGv~~~l~~ 257 (261)
T 2rbk_A 186 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 257 (261)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEec-CccHHHHhhCCEEeccCchhhHHHHHHH
Confidence 478888888877655 57889999999999999999999999 8888899999999999888999988753
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.88 E-value=2.5e-09 Score=114.19 Aligned_cols=128 Identities=18% Similarity=0.278 Sum_probs=97.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-----eC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----SS 561 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-----~~ 561 (845)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+...-..++..++ .....+ ..
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~d---------------g~~tg~i~~~~~~ 243 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIRD---------------NVLTDNITLPIMN 243 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEET---------------TEEEEEECSSCCC
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEeeC---------------CeeeeeEecccCC
Confidence 4889999999999999999999999999999999999998642111110000 000011 12
Q ss_pred hhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 562 PMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
+..|..+++.+.+++| +.++++||+.||++|.+.||+|++++ +.+..++.||.++..+++.++.++++
T Consensus 244 ~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~--~~~~~~~~a~~~i~~~~L~~ll~~L~ 314 (317)
T 4eze_A 244 AANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK--AKPVVREKIHHQINYHGFELLLFLIE 314 (317)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES--CCHHHHHHCCEEESSSCGGGGGGGTC
T ss_pred CCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC--CCHHHHHhcCeeeCCCCHHHHHHHHH
Confidence 3567777766665545 57999999999999999999999994 67788899999998888988877654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.86 E-value=7.7e-09 Score=111.61 Aligned_cols=144 Identities=16% Similarity=0.223 Sum_probs=98.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeC-ccccc--CC-----------HHHHh----
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFRE--KS-----------DEELS---- 548 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g-~~~~~--~~-----------~~~~~---- 548 (845)
++++++.++++.|++ |+++.++||+....+....+.+++.. .+... ..... .. ...+.
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRG---ELHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCS---EEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhh---hhcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 468899999999999 99999999998766777777777732 11111 00000 00 00000
Q ss_pred ---hhcCC-------eeEE---EEeChhcHHHHHHHHHhhcC--CEEEEEcCCccCHHHHHhC----CeeEEeCCCCcHH
Q 003127 549 ---KLIPK-------IQVM---ARSSPMDKHTLVKHLRTTLG--EVVAVTGDGTNDAPALHEA----DIGLAMGIAGTEV 609 (845)
Q Consensus 549 ---~~~~~-------~~v~---~~~~p~~K~~~v~~l~~~~g--~~v~~~GDg~ND~~ml~~A----~vgIamg~~~~~~ 609 (845)
+.+.+ ..+. ....+.+|+..++.+... . +.++++|||.||++|++.| |+|||| |+.+.
T Consensus 179 ~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~-~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~ 255 (332)
T 1y8a_A 179 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCES-KGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEY 255 (332)
T ss_dssp HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHH-HTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHH
T ss_pred HHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChh-hcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHH
Confidence 10000 0000 112356798888866644 2 3488999999999999999 999999 68899
Q ss_pred HHhccCEEeccCChhHHHHHHH----HHHHHH
Q 003127 610 AKESADVIILDDNFSTIVTVAK----WGRSVY 637 (845)
Q Consensus 610 ak~~ad~v~~~~~~~~i~~~i~----~gR~~~ 637 (845)
+|+.||+++.+++.+++.++|+ +||..+
T Consensus 256 lk~~Ad~v~~~~~~dGV~~~l~~~~~~~~~~~ 287 (332)
T 1y8a_A 256 ALKHADVVIISPTAMSEAKVIELFMERKERAF 287 (332)
T ss_dssp HHTTCSEEEECSSTHHHHHHHHHHHHHGGGGG
T ss_pred HHhhCcEEecCCCCCHHHHHHHHHHHcCCchh
Confidence 9999999999999999888764 355444
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.85 E-value=7.8e-09 Score=105.41 Aligned_cols=129 Identities=26% Similarity=0.341 Sum_probs=94.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-..++.+++... ....|+--.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 167 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVER----------------GKPHPDMAL 167 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCCCCC----------------CCCCHHHHH
Confidence 4678999999999999999999999999999999999998754334443332110 011223233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe---eEEeCCCCcHHHHh-ccCEEeccCChhHHHHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAKE-SADVIILDDNFSTIVTVAKWGR 634 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v---gIamg~~~~~~ak~-~ad~v~~~~~~~~i~~~i~~gR 634 (845)
.+++.+... .+.++++||+.||++|.+.||+ +|+||.+..+..++ .||+++.+ +..+.++++.|+
T Consensus 168 ~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l~~~~ 236 (237)
T 4ex6_A 168 HVARGLGIP-PERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDS--FPAAVTAVLDGH 236 (237)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESS--HHHHHHHHHHC-
T ss_pred HHHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECC--HHHHHHHHHccC
Confidence 444444333 3679999999999999999999 99999544455555 89999965 888888887654
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.82 E-value=3.4e-09 Score=104.89 Aligned_cols=119 Identities=25% Similarity=0.331 Sum_probs=90.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|++.|++++++|+.+...+..+ +.+|+......+...+. ...-....|..|.
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~k~ 142 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFEDG---------------KFQGIRLRFRDKG 142 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEETT---------------EEEEEECCSSCHH
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeCC---------------ceECCcCCccCHH
Confidence 7899999999999999999999999998888888 88887532000000000 0011345567899
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
..++.+ . .+.++++||+.||++|++.||++++|+ ++.+ .||+++.+ ++.+.++++
T Consensus 143 ~~l~~l--~-~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~----~ad~v~~~--~~el~~~l~ 197 (201)
T 4ap9_A 143 EFLKRF--R-DGFILAMGDGYADAKMFERADMGIAVG-REIP----GADLLVKD--LKELVDFIK 197 (201)
T ss_dssp HHHGGG--T-TSCEEEEECTTCCHHHHHHCSEEEEES-SCCT----TCSEEESS--HHHHHHHHH
T ss_pred HHHHhc--C-cCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc----cccEEEcc--HHHHHHHHH
Confidence 999988 3 567889999999999999999999999 6665 79999965 666776654
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=105.46 Aligned_cols=57 Identities=25% Similarity=0.228 Sum_probs=49.2
Q ss_pred hcHHHHHHHHHhhc---C-CEEEEEcCCccCHHHHHhCCeeEEeCCCCc-HHHHhccCEEecc
Q 003127 563 MDKHTLVKHLRTTL---G-EVVAVTGDGTNDAPALHEADIGLAMGIAGT-EVAKESADVIILD 620 (845)
Q Consensus 563 ~~K~~~v~~l~~~~---g-~~v~~~GDg~ND~~ml~~A~vgIamg~~~~-~~ak~~ad~v~~~ 620 (845)
.+|+..++.+.+.+ + +.++++||+.||++||+.||+||||| |+. +..++.||+++.+
T Consensus 178 ~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~g-na~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 178 SDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp CCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTEEEESSHHHHH
T ss_pred CChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeC-CCCccccchhceEEecc
Confidence 57999999988763 3 57999999999999999999999999 777 7788889988755
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=5.5e-09 Score=104.15 Aligned_cols=124 Identities=15% Similarity=0.073 Sum_probs=93.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
++.+++.+.++.|++.|++++++|+.....+....+.+|+...- ..+++++. . ....
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~-~--------------------~~kp 128 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE-A--------------------PPKP 128 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT-S--------------------CCTT
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC-C--------------------CCCC
Confidence 45789999999999999999999999999999999999986422 22222211 0 0112
Q ss_pred HHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCe-eEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHHH
Q 003127 565 KHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGR 634 (845)
Q Consensus 565 K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~gR 634 (845)
|..+++.+.+++| +.++++||+.||++|.+.||+ +|+|+ ++.+..++.||+++.+ +..+.+.++..|
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~~ad~v~~~--~~el~~~~~~~~ 199 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDNPWPELTDWHARD--CAQLRDLLSAEG 199 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSCSCGGGCSEECSS--HHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCCcccccCCEEeCC--HHHHHHHHHhcc
Confidence 2334444444434 678999999999999999999 99999 7777778899999965 888888776543
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.73 E-value=2.3e-08 Score=100.97 Aligned_cols=124 Identities=12% Similarity=0.133 Sum_probs=93.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+...-..++.++.. .....|.
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~--------------------~~~kp~~ 145 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSSLD--------------------GKLSTKE 145 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTT--------------------SSSCSHH
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccCCC--------------------CCCCCCH
Confidence 57899999999999999999999999999999999999986432222222111 0123455
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCe---eEEeCCCCcHHH-HhccCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVA-KESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~v---gIamg~~~~~~a-k~~ad~v~~~~~~~~i~~~i~~ 632 (845)
..++.+.+++| +.++++||+.||++|.+.||+ +|+||....+.. +..||+++.+ +..+.+++..
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s--~~el~~~~~~ 216 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNS--VDELHKKILE 216 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESS--HHHHHHHHHT
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECC--HHHHHHHHHH
Confidence 66665555544 579999999999999999999 888884333333 6889999965 8888887654
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=3.6e-08 Score=98.72 Aligned_cols=126 Identities=13% Similarity=0.111 Sum_probs=87.6
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc----eeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG----IAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~----~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
+.+++.+.++.|+++|++++++|+.....+....+.+|+..... .+...+... . . ......+|.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~-~~~~~~~~~ 150 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGSF-------K----E-LDNSNGACD 150 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSBE-------E----E-EECTTSTTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCce-------e----c-cCCCCCCcc
Confidence 77999999999999999999999999999999999999853110 111110000 0 0 000112345
Q ss_pred cHHHHHHHH-HhhcCCEEEEEcCCccCHHHHHh----CCeeEEeCCCCcHHHHhccCEEeccCChhHHHHH
Q 003127 564 DKHTLVKHL-RTTLGEVVAVTGDGTNDAPALHE----ADIGLAMGIAGTEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 564 ~K~~~v~~l-~~~~g~~v~~~GDg~ND~~ml~~----A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
.|.+.+... ... .+.++++||+.||++|+++ ++++++|+ ++.+..++.||+++.+ ++.+.++
T Consensus 151 ~~~~~l~~~~~~~-~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~~~~~~~~ad~v~~~--~~el~~~ 217 (219)
T 3kd3_A 151 SKLSAFDKAKGLI-DGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IEREKVINLSKYVARN--VAELASL 217 (219)
T ss_dssp CHHHHHHHHGGGC-CSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CCCHHHHHHCSEEESS--HHHHHHH
T ss_pred cHHHHHHHHhCCC-CCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cccHHHHhhcceeeCC--HHHHHHh
Confidence 565555544 323 5789999999999999976 46666666 6777888999999965 6666554
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=98.68 E-value=2.9e-08 Score=104.82 Aligned_cols=133 Identities=18% Similarity=0.145 Sum_probs=95.0
Q ss_pred CCChhHHHHHHHHHHc-CCEEEEEcCC---------------------CHHHHHHHHHHcCCccCCceeeeCcccccCCH
Q 003127 487 PMRPGVKESVAICRSA-GITVRMVTGD---------------------NINTAKAIARECGILTDNGIAIEGPEFREKSD 544 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~-Gi~v~~~TGd---------------------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~ 544 (845)
...+++.+.++.+++. |+++.+.|.. ....+..+.+..|+... +.........
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~-- 196 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVN---INRCNPLAGD-- 196 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEE---EEECCGGGTC--
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEE---EEEccccccC--
Confidence 3568899999999998 9999998876 34455555555665321 0000000000
Q ss_pred HHHhhhcCCeeEEEEe--ChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEec
Q 003127 545 EELSKLIPKIQVMARS--SPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 619 (845)
Q Consensus 545 ~~~~~~~~~~~v~~~~--~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~ 619 (845)
+....+... ....|...++.+.+++| +.++++||+.||++|++.||+|++|| ++.+..++.||+++.
T Consensus 197 -------~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~~~~~~a~~v~~ 268 (289)
T 3gyg_A 197 -------PEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQEAKNLHNLITD 268 (289)
T ss_dssp -------CTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCHHHHHHCCCBCS
T ss_pred -------CCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccHHHHHhCCEEcC
Confidence 000122222 23578888888887766 56899999999999999999999999 889999999999999
Q ss_pred cCChhHHHHHHHH
Q 003127 620 DDNFSTIVTVAKW 632 (845)
Q Consensus 620 ~~~~~~i~~~i~~ 632 (845)
+++.+|+.+++++
T Consensus 269 ~~~~~gv~~~~~~ 281 (289)
T 3gyg_A 269 SEYSKGITNTLKK 281 (289)
T ss_dssp SCHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHH
Confidence 9889999988863
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.64 E-value=3.1e-08 Score=99.54 Aligned_cols=123 Identities=11% Similarity=0.065 Sum_probs=85.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.+++.|+++.++|++ ..+....+.+|+...-..++.+++... ....|+--.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 152 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPAEVAA----------------SKPAPDIFI 152 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTTTSSS----------------CTTSSHHHH
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccccCCC----------------CCCChHHHH
Confidence 35789999999999999999999998 455677788887643223332222100 001122223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+++.+... .+.++++||+.||++|++.||++++|+ ++.+..+ .||+++.+.+..++..++
T Consensus 153 ~~~~~lgi~-~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~~~~ 213 (221)
T 2wf7_A 153 AAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLEFLK 213 (221)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHHHHH
T ss_pred HHHHHcCCC-hhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHHHHH
Confidence 333333322 367889999999999999999999999 7777777 899999876665555544
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.63 E-value=6.4e-08 Score=98.24 Aligned_cols=124 Identities=15% Similarity=0.155 Sum_probs=82.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|+++.++|+... +....+.+|+...-..++.+++. -.....|+--.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~~----------------~~~Kp~~~~~~ 153 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTTL----------------AKGKPDPDIFL 153 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC-------------------------CCHHH
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhhC----------------CCCCCChHHHH
Confidence 3678999999999999999999999854 77888899986543333333221 01112233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+++.+.-. .+.++++||+.||+.|.+.||++++|. ++.+..+ .||+++.+.+..++..+++
T Consensus 154 ~~~~~lgi~-~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~~~~~ 215 (233)
T 3nas_A 154 TAAAMLDVS-PADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLELLHE 215 (233)
T ss_dssp HHHHHHTSC-GGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHHHHHH
T ss_pred HHHHHcCCC-HHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHHHHHH
Confidence 455555443 367899999999999999999999999 6666666 8999998765555555544
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.63 E-value=2.2e-07 Score=92.38 Aligned_cols=128 Identities=17% Similarity=0.081 Sum_probs=94.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.++.|++. ++++++|+.+...+..+.+.+|+...- ..+..+.+.. ....-...|+.|
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~-------------~~~~~~p~p~~~ 134 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDR-------------VVGYQLRQKDPK 134 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECTTSC-------------EEEEECCSSSHH
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcCCce-------------EEeeecCCCchH
Confidence 5789999999999999 999999999999999999999986421 1122211100 000112567889
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
...++.+... ++.++++||+.||++|.+.||+++++. . .+..++.++.++.-+++..+.+++.
T Consensus 135 ~~~l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~-~-~~~~~~~~~~~~~~~~~~~l~~~l~ 197 (206)
T 1rku_A 135 RQSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-A-PENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-C-CHHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHHHHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEEC-C-cHHHHHHHhhhccccchHHHHHHHH
Confidence 9999999887 789999999999999999999999985 4 4444554443332356888877663
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.61 E-value=5.2e-08 Score=98.72 Aligned_cols=124 Identities=15% Similarity=0.089 Sum_probs=91.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|++++++|+.....+....+.+|+...-..++.+++.. ....|.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 150 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRDDVS--------------------YGKPDP 150 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGGGSS--------------------CCTTST
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccccCC--------------------CCCCCh
Confidence 457899999999999999999999999999999999999875333333322211 012234
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCe---eEEeCCCCcHHHHhc-cCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAKES-ADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~v---gIamg~~~~~~ak~~-ad~v~~~~~~~~i~~~i~~ 632 (845)
.+.+.+.+++| +.++++||+.||++|.+.||+ +|++|.++.+..++. ||+++.+ +..+.+.++.
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~--~~el~~~l~~ 221 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYED--PLDLLNHLDE 221 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESS--HHHHHHTGGG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECC--HHHHHHHHHH
Confidence 44555544444 678999999999999999999 777775556666664 9999965 8888887754
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.58 E-value=1.2e-07 Score=95.33 Aligned_cols=116 Identities=16% Similarity=0.231 Sum_probs=82.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.+++.|++++++|+.....+....+.+|+......++.++... .....|.-..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----------------~~kp~~~~~~ 157 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLP----------------YSKPHPQVYL 157 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSS----------------CCTTSTHHHH
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEeccccC----------------CCCCChHHHH
Confidence 456889999999999999999999999988898999988864322232222110 0001122223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe----CCCCcHHHHhccCEEecc
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam----g~~~~~~ak~~ad~v~~~ 620 (845)
.+.+.+... .+.++++||+.||++|++.||++++| + ++.+..+..||+++.+
T Consensus 158 ~~~~~~~i~-~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~-~~~~~~~~~a~~v~~~ 213 (226)
T 1te2_A 158 DCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVPAPE-AQNDPRFVLANVKLSS 213 (226)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECCCTT-TTTCGGGGGSSEECSC
T ss_pred HHHHHcCCC-HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCC-CcccccccccCeEECC
Confidence 334443332 36789999999999999999999999 6 5555678899999865
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.56 E-value=7.8e-08 Score=96.64 Aligned_cols=120 Identities=17% Similarity=0.124 Sum_probs=82.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHH
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 567 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 567 (845)
+.+++.+.++.+++.|+++.++|+..........+.+|+...-..++.++... ....|..
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~k~~~~ 149 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGEDVT--------------------HHKPDPE 149 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGGCS--------------------SCTTSTH
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhhcC--------------------CCCCChH
Confidence 35889999999999999999999999998998888888764322222221110 0112223
Q ss_pred HHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEe----CCCCcHHHHhc-cCEEeccCChhHHHHHH
Q 003127 568 LVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKES-ADVIILDDNFSTIVTVA 630 (845)
Q Consensus 568 ~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIam----g~~~~~~ak~~-ad~v~~~~~~~~i~~~i 630 (845)
..+.+.+++| +.++++||+.||++|++.||++++| + ++.+..++. ||+++.+ ++.+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~-~~~~~l~~~~ad~v~~~--~~el~~~l 217 (225)
T 3d6j_A 150 GLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGM-TTAQEFQAYPYDRIIST--LGQLISVP 217 (225)
T ss_dssp HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSS-CCTTGGGGSCCSEEESS--GGGGC---
T ss_pred HHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCC-CChHHHhhcCCCEEECC--HHHHHHhh
Confidence 4444443334 5788999999999999999999887 5 444555555 9999965 55555554
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.51 E-value=4.7e-07 Score=91.84 Aligned_cols=102 Identities=22% Similarity=0.168 Sum_probs=76.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-----eC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----SS 561 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-----~~ 561 (845)
++.|++.+.++.|+++|++++++||.....+..+++.+|+.. ++...... . +.....+ ..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~----~~~~~~~~-~----------~~~~~g~~~~~~~~ 156 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQH----LIATDPEY-R----------DGRYTGRIEGTPSF 156 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCE----EEECEEEE-E----------TTEEEEEEESSCSS
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCE----EEEcceEE-E----------CCEEeeeecCCCCc
Confidence 478999999999999999999999999999999999999862 11110000 0 0001111 22
Q ss_pred hhcHHHHHHHHHhhcC------CEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 562 PMDKHTLVKHLRTTLG------EVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g------~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
+..|...++.+.+..| +.++++||+.||++|++.||+++++.
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 3667777776665445 68999999999999999999999985
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.50 E-value=2.1e-07 Score=96.60 Aligned_cols=126 Identities=20% Similarity=0.230 Sum_probs=86.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ..++.++... .....|+.-
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----------------~~kp~~~~~ 166 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP----------------AGRPYPWMC 166 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS----------------CCTTSSHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCCccC----------------CCCCCHHHH
Confidence 45789999999999999999999999998888888888765321 2222221110 001123333
Q ss_pred HHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCC---eeEEeCCCC------------------------cHHHHhc-cCE
Q 003127 566 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEAD---IGLAMGIAG------------------------TEVAKES-ADV 616 (845)
Q Consensus 566 ~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~---vgIamg~~~------------------------~~~ak~~-ad~ 616 (845)
..+++.+... . +.++++||+.||++|++.|| +++++| ++ .+..++. ||+
T Consensus 167 ~~~~~~lgi~-~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ 244 (267)
T 1swv_A 167 YKNAMELGVY-PMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHF 244 (267)
T ss_dssp HHHHHHHTCC-SGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHhCCC-CCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCce
Confidence 4455555433 3 57999999999999999999 677777 44 3344444 999
Q ss_pred EeccCChhHHHHHHHH
Q 003127 617 IILDDNFSTIVTVAKW 632 (845)
Q Consensus 617 v~~~~~~~~i~~~i~~ 632 (845)
++.+ +..+..++..
T Consensus 245 v~~~--~~el~~~l~~ 258 (267)
T 1swv_A 245 TIET--MQELESVMEH 258 (267)
T ss_dssp EESS--GGGHHHHHHH
T ss_pred eccC--HHHHHHHHHH
Confidence 9954 7777776643
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.9e-07 Score=94.33 Aligned_cols=121 Identities=12% Similarity=0.117 Sum_probs=88.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|+++.++|+.+...+....+.+|+...-..++.+++.. ....|.
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 155 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVDEVR--------------------LFKPHQ 155 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGGGTT--------------------CCTTCH
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehhhcc--------------------cCCCCh
Confidence 577899999999999999999999999999999999999865332333222111 011223
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEe----CCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIam----g~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+.+.+.+++| +.++++||+.||+.|.+.||++++| + ++.+..+..+|+++.+ +..+.+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~el~~~l 223 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSN-GVFDQLGVVPDIVVSD--VGVLASRF 223 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTS-CCCCCSSCCCSEEESS--HHHHHHTC
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCC-CccccccCCCcEEeCC--HHHHHHHH
Confidence 34444433334 6789999999999999999999999 4 4455567789999965 77776654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.48 E-value=1.6e-07 Score=95.26 Aligned_cols=126 Identities=10% Similarity=0.061 Sum_probs=92.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|+++.++|+.+...+....+.+|+...-..++.+++... ....|+--.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 162 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDAVRL----------------YKTAPAAYA 162 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGGTTC----------------CTTSHHHHT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecccCC----------------CCcCHHHHH
Confidence 4678999999999999999999999999999999999998654333333322110 011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe----CCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam----g~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+.+.+.-. .+.++++||+.||+.|.+.||++++| + ++.+..+..||+++.+ +..+.+++..
T Consensus 163 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~-~~~~~~~~~~~~v~~~--~~el~~~l~~ 228 (233)
T 3umb_A 163 LAPRAFGVP-AAQILFVSSNGWDACGATWHGFTTFWINRLG-HPPEALDVAPAAAGHD--MRDLLQFVQA 228 (233)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCEEEEECTTC-CCCCSSSCCCSEEESS--HHHHHHHHHC
T ss_pred HHHHHhCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCC-CCchhccCCCCEEECC--HHHHHHHHHH
Confidence 344444333 36788999999999999999999999 6 5666667889999965 8888887754
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.47 E-value=3.8e-07 Score=92.35 Aligned_cols=121 Identities=12% Similarity=0.146 Sum_probs=85.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~---~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
+.+++.+.++.|++.|+++.++|+.. ........+.+|+...-..++.+++.. ...|
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~------------------~~kp-- 159 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFADEVL------------------SYKP-- 159 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHHHHT------------------CCTT--
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheeccccC------------------CCCC--
Confidence 47899999999999999999999999 888888899998864322222221110 0111
Q ss_pred HHHHHHHHHhhcC---CEEEEEcCCc-cCHHHHHhCCeeEEe---CCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 565 KHTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 565 K~~~v~~l~~~~g---~~v~~~GDg~-ND~~ml~~A~vgIam---g~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
+..+.+.+.+++| +.++++||+. ||++|.+.||++++| | ++.+..+..+|+++.+ +..+.++++
T Consensus 160 ~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~-~~~~~~~~~~~~~~~~--~~el~~~l~ 230 (235)
T 2om6_A 160 RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQE-GDKVRKLEERGFEIPS--IANLKDVIE 230 (235)
T ss_dssp CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTT-CCSCEEEETTEEEESS--GGGHHHHHH
T ss_pred CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCC-CCCcccCCCCcchHhh--HHHHHHHHH
Confidence 2334444444434 6789999999 999999999999999 5 3344445668888854 666766653
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.45 E-value=7.6e-08 Score=100.02 Aligned_cols=60 Identities=13% Similarity=0.257 Sum_probs=49.5
Q ss_pred hcHHHHHHHHHhhc-CCEEEEEcC----CccCHHHHHhCC-eeEEeCCCCcHHHHhccCEEeccCChh
Q 003127 563 MDKHTLVKHLRTTL-GEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADVIILDDNFS 624 (845)
Q Consensus 563 ~~K~~~v~~l~~~~-g~~v~~~GD----g~ND~~ml~~A~-vgIamg~~~~~~ak~~ad~v~~~~~~~ 624 (845)
.+|+..++.+ ... .+.|+++|| +.||++||+.|+ .|++|| |+.+.+|+.||+++.+++.+
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~~~k~~a~~v~~~~~~~ 261 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFFPETAHE 261 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHCTTC---
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCHHHHHhhheeCCCCcCC
Confidence 5789999988 221 268999999 999999999999 599999 99999999999998776543
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.44 E-value=2.7e-07 Score=93.18 Aligned_cols=130 Identities=19% Similarity=0.233 Sum_probs=89.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe------
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS------ 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~------ 560 (845)
++.|++.+.++.|+++|++++++|+.+...+..+.+.+|+.... +++..-... ....+.+..
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~--~f~~~~~~~----------~~~~~~~~~~~~~~~ 153 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFANRLKFY----------FNGEYAGFDETQPTA 153 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEECEEEC----------TTSCEEEECTTSGGG
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCccc--EEeeeEEEc----------CCCcEecCCCCCccc
Confidence 57899999999999999999999999999999999999986310 111000000 000011111
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCeeEEeCCCC-cHHHHhccCEEeccCChhHHHHHH
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~vgIamg~~~-~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+..|..+++.+.+++| +.++++||+.||++|.+.||++|+++... .+.....+|+++.+ +..+.+++
T Consensus 154 ~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 223 (225)
T 1nnl_A 154 ESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD--FVELLGEL 223 (225)
T ss_dssp STTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC--GGGGCC--
T ss_pred CCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecC--HHHHHHHH
Confidence 12367777777766656 67999999999999999999999887332 23445678998855 65554433
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.5e-07 Score=92.45 Aligned_cols=122 Identities=16% Similarity=0.158 Sum_probs=88.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|++.|++++++|+.....+....+.+|+...-..++.+++.. ....|.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 169 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSNLDG--------------------TRVNKN 169 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECTTS--------------------CCCCHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEeccccC--------------------CCCCCH
Confidence 467899999999999999999999999999999999999864322222221110 123455
Q ss_pred HHHHHHHhhcC----CEEEEEcCCccCHHHHHhCCe---eEEeCCCCcHH-HHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLG----EVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV-AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g----~~v~~~GDg~ND~~ml~~A~v---gIamg~~~~~~-ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+.+.+.+.+| +.++++||+.||++|.+.||+ ++++|.+..+. .+..||+++.+ ++.+.++|
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~--~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVEN--VESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESS--STTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECC--HHHHHHHh
Confidence 55655555434 368899999999999999999 77777333333 35889999965 66665543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.41 E-value=9.8e-07 Score=89.28 Aligned_cols=124 Identities=19% Similarity=0.201 Sum_probs=88.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++. +++.++|+.+...+....+.+|+...-..++.+++.. .....|+--.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~----------------~~kp~~~~~~ 162 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSEEAG----------------FFKPHPRIFE 162 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEeccccC----------------CCCcCHHHHH
Confidence 4678999999999999 9999999999999999999999864322222221110 0011122223
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCC---eeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEAD---IGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~---vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+.+.+.-. .+.++++||+. ||+.|.+.|| +++++| ++.+..++.||+++.+ +..+.++++
T Consensus 163 ~~~~~~~~~-~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~a~~~~~~--~~el~~~l~ 227 (234)
T 3u26_A 163 LALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEKREFWDKCDFIVSD--LREVIKIVD 227 (234)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STTGGGGGGCSEEESS--THHHHHHHH
T ss_pred HHHHHcCCC-chhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCccccccCCCEeeCC--HHHHHHHHH
Confidence 333443332 36799999997 9999999999 678788 6777777899999965 777777664
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.38 E-value=3.2e-07 Score=91.22 Aligned_cols=121 Identities=16% Similarity=0.178 Sum_probs=85.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|++++++|+.....+....+.+|+...-..++.+++... ....|+--.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~kp~~~~~~ 152 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGEEFKE----------------SKPNPEIYL 152 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGCSS----------------CTTSSHHHH
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecccccC----------------CCCChHHHH
Confidence 4678999999999999999999999999999999999998654333333322110 011222233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCC-cHHHHhccCEEeccCChhHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG-TEVAKESADVIILDDNFSTI 626 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~-~~~ak~~ad~v~~~~~~~~i 626 (845)
.+++.+.-. .+.++++||+.||++|.+.||+++++..++ .+..+..||+++.+ +..+
T Consensus 153 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~--~~el 210 (214)
T 3e58_A 153 TALKQLNVQ-ASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDS--LTDV 210 (214)
T ss_dssp HHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESS--GGGG
T ss_pred HHHHHcCCC-hHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHH--HHHH
Confidence 444444433 367899999999999999999999887443 33345789999865 5444
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.38 E-value=9.6e-07 Score=89.38 Aligned_cols=121 Identities=18% Similarity=0.196 Sum_probs=81.2
Q ss_pred CChhHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 488 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 488 l~~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+...-..++.+.+.. ..+..+.
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~-------------------~~~k~~~ 154 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDAL-------------------DRNELPH 154 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCS-------------------SGGGHHH
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCCCc-------------------CccchHH
Confidence 578999999999999 99999999999999999999999865322222222110 0112233
Q ss_pred HHHHHHHhhcC-----CEEEEEcCCccCHHHHHhCC---eeEEeCCCCcHH-HHh-ccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEV-AKE-SADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g-----~~v~~~GDg~ND~~ml~~A~---vgIamg~~~~~~-ak~-~ad~v~~~~~~~~i~~~i 630 (845)
.+.+.+.+++| +.++++||+.||++|.+.|| +++++| ++.+. .+. .||+++.+ +..+.+.+
T Consensus 155 ~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~~~a~~v~~~--~~el~~~l 225 (234)
T 2hcf_A 155 IALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELARHKPGTLFKN--FAETDEVL 225 (234)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHTTCCSEEESC--SCCHHHHH
T ss_pred HHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEeCC--HHhHHHHH
Confidence 33333333323 57899999999999999999 555556 33333 333 38999865 44454444
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.37 E-value=2.3e-07 Score=91.59 Aligned_cols=119 Identities=18% Similarity=0.198 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
.+.+++.+.++.+++.|++++++|+....... ..+.+|+...-..++..++.. .....|+--.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 147 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQSGF----------------VRKPSPEAAT 147 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGGGCC----------------CCTTSSHHHH
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecCcCC----------------CCCCCcHHHH
Confidence 35789999999999999999999999988888 888888754222222221110 0001122223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+.+.++.. .+.++++||+.||++|++.||++ ++|+ ++. . .||+++.+ +..+.+++
T Consensus 148 ~~~~~~~i~-~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~-~---~a~~v~~~--~~el~~~l 204 (207)
T 2go7_A 148 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST-Y---EGNHRIQA--LADISRIF 204 (207)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS-C---TTEEECSS--TTHHHHHT
T ss_pred HHHHHhCCC-cccEEEECCCHHHHHHHHHCCCeEEEEe-cCC-C---CCCEEeCC--HHHHHHHH
Confidence 444444433 36788999999999999999997 8888 665 3 68998865 55665544
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.35 E-value=6e-07 Score=87.17 Aligned_cols=121 Identities=15% Similarity=0.142 Sum_probs=81.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcC--CccCCceeee-----CcccccCCH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECG--ILTDNGIAIE-----GPEFREKSD 544 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~lg--i~~~~~~~i~-----g~~~~~~~~ 544 (845)
++.|++.+++++|+++|+++.++|+++. ..+....+.+| +.. ++. +++..
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~----~~~~~~~~~~~~~---- 98 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDA----IFMCPHGPDDGCA---- 98 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCE----EEEECCCTTSCCS----
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeE----EEEcCCCCCCCCC----
Confidence 5789999999999999999999999986 56677777888 321 110 00000
Q ss_pred HHHhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe---eEEeCCCCcHHHH----hccCEE
Q 003127 545 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTEVAK----ESADVI 617 (845)
Q Consensus 545 ~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v---gIamg~~~~~~ak----~~ad~v 617 (845)
.....|+-=..+++.+.-. .+.++++||+.||+.|.+.||+ +|++| ++.+... ..||++
T Consensus 99 ------------~~KP~~~~~~~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~~d~v 164 (179)
T 3l8h_A 99 ------------CRKPLPGMYRDIARRYDVD-LAGVPAVGDSLRDLQAAAQAGCAPWLVQTG-NGRKTLAQGGLPEGTRV 164 (179)
T ss_dssp ------------SSTTSSHHHHHHHHHHTCC-CTTCEEEESSHHHHHHHHHHTCEEEEESTT-THHHHHHHCCCCTTEEE
T ss_pred ------------CCCCCHHHHHHHHHHcCCC-HHHEEEECCCHHHHHHHHHCCCcEEEECCC-CcchhhhhcccCCCcEE
Confidence 0011122223444444433 4678999999999999999995 77777 4444433 457999
Q ss_pred eccCChhHHHHHHH
Q 003127 618 ILDDNFSTIVTVAK 631 (845)
Q Consensus 618 ~~~~~~~~i~~~i~ 631 (845)
+.+ +..+.+.+.
T Consensus 165 ~~~--l~el~~~l~ 176 (179)
T 3l8h_A 165 CED--LAAVAEQLL 176 (179)
T ss_dssp ESS--HHHHHHHHH
T ss_pred ecC--HHHHHHHHH
Confidence 966 777777654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.34 E-value=2.9e-07 Score=96.60 Aligned_cols=125 Identities=11% Similarity=-0.017 Sum_probs=87.7
Q ss_pred CCChhHHHHHHHHHHcCC--EEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 487 PMRPGVKESVAICRSAGI--TVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi--~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
++.|++.+.++.|++.|+ +++++|+.....+....+.+|+...-..++.++..... . ..+..
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~~~--------------~--~~~Kp 205 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTD--------------T--LVCKP 205 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSSCS--------------S--CCCTT
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCCCc--------------c--cCCCc
Confidence 578999999999999999 99999999999999999999987543334333221100 0 01123
Q ss_pred HHHHHHHHHhhc---C-CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHH------HhccCEEeccCChhHHHHHH
Q 003127 565 KHTLVKHLRTTL---G-EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVA------KESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 565 K~~~v~~l~~~~---g-~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~a------k~~ad~v~~~~~~~~i~~~i 630 (845)
|..+++.+.+++ . +.++++||+.||+.|.+.||+|.+|+ ++.+.. ...||+++.+ +..+.+++
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~ad~vi~s--l~el~~~l 278 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVENEVNEILGQTPEGAIVISD--ILELPHVV 278 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECSCCC----CCCCTTCEEESS--GGGGGGTS
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcCCccccccccCCCCCEEeCC--HHHHHHHh
Confidence 444444443332 3 67899999999999999999999998 444432 3378899865 66655443
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.34 E-value=1.3e-06 Score=90.85 Aligned_cols=127 Identities=15% Similarity=0.044 Sum_probs=87.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC-CceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD-NGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~-~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+... ...++.+++... ....|.--
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------~kp~~~~~ 174 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFATDVVR----------------GRPFPDMA 174 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGGGSSS----------------CTTSSHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHHhcCC----------------CCCCHHHH
Confidence 4678999999999999999999999999999999998887543 223333222110 01122223
Q ss_pred HHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCC---eeEEeCCC-----------------------CcHHHH-hccCEE
Q 003127 566 HTLVKHLRTTLG-EVVAVTGDGTNDAPALHEAD---IGLAMGIA-----------------------GTEVAK-ESADVI 617 (845)
Q Consensus 566 ~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~---vgIamg~~-----------------------~~~~ak-~~ad~v 617 (845)
..+++.+... . +.++++||+.||+.|.+.|| ++|++|.+ +.+..+ ..||++
T Consensus 175 ~~~~~~lgi~-~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v 253 (277)
T 3iru_A 175 LKVALELEVG-HVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYV 253 (277)
T ss_dssp HHHHHHHTCS-CGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHcCCC-CCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEE
Confidence 3444454444 4 67999999999999999999 56766632 123344 449999
Q ss_pred eccCChhHHHHHHHH
Q 003127 618 ILDDNFSTIVTVAKW 632 (845)
Q Consensus 618 ~~~~~~~~i~~~i~~ 632 (845)
+.+ +..+.+++..
T Consensus 254 ~~~--~~el~~~l~~ 266 (277)
T 3iru_A 254 IDS--VADLETVITD 266 (277)
T ss_dssp ESS--GGGTHHHHHH
T ss_pred ecC--HHHHHHHHHH
Confidence 965 7777777643
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.34 E-value=5.4e-07 Score=92.33 Aligned_cols=121 Identities=22% Similarity=0.297 Sum_probs=84.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|++++++|+.+...+..+.+.+|+...-..++.+++... ....|+-..
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 177 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPFY 177 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEecccCCC----------------CCcCHHHHH
Confidence 4678999999999999999999999999999999999998653333443332110 011233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCC----CcHHHHhccCEEeccCChhHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIA----GTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~----~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
.+++.+... .+.++++||+.||++|.+.||++++ +. + +.+..+..||+++.+ +..+.
T Consensus 178 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~ad~vi~~--~~el~ 239 (243)
T 2hsz_A 178 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQSKPDWIFDD--FADIL 239 (243)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGGGCCSEEESS--GGGGG
T ss_pred HHHHHhCcC-hhhEEEEcCCHHHHHHHHHCCCeEEEEc-CCCCchhhhhhCCCCEEECC--HHHHH
Confidence 455555433 4678999999999999999999854 33 3 233456789999854 55443
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.33 E-value=1.1e-06 Score=89.78 Aligned_cols=124 Identities=17% Similarity=0.144 Sum_probs=83.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
++.+++.+.++.|++.|+++.++|+.....+....+. |+...- ..++.+++... ....|+-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~~~~~----------------~kp~~~~ 171 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAFDVKY----------------GKPNPEP 171 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTTTCSS----------------CTTSSHH
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHHhCCC----------------CCCChHH
Confidence 5678999999999999999999999998877777777 776533 33444332110 0112222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE-EeCCCCcHH----HHhccCEEeccCChhHHHHHHH
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEV----AKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI-amg~~~~~~----ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
-..+++.+.-. .+.++++||+.||+.|.+.||++. .+. ++... .+..||+++.+ +..+.++++
T Consensus 172 ~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~s--~~el~~~l~ 239 (243)
T 3qxg_A 172 YLMALKKGGLK-ADEAVVIENAPLGVEAGHKAGIFTIAVN-TGPLDGQVLLDAGADLLFPS--MQTLCDSWD 239 (243)
T ss_dssp HHHHHHHTTCC-GGGEEEEECSHHHHHHHHHTTCEEEEEC-CSSSCHHHHHHTTCSEEESC--HHHHHHHHH
T ss_pred HHHHHHHcCCC-HHHeEEEeCCHHHHHHHHHCCCEEEEEe-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 23333333322 367899999999999999999854 454 44332 23469999965 888777664
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.33 E-value=1.3e-06 Score=88.26 Aligned_cols=122 Identities=15% Similarity=0.128 Sum_probs=83.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+...-..++.+++... ....|+--.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~Kp~~~~~~ 166 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGT----------------IKPSPEPVL 166 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEETSSSC----------------CTTSSHHHH
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEcccccCC----------------CCCChHHHH
Confidence 4678999999999999999999999999999999999998643222222211100 011222234
Q ss_pred HHHHHHHhhcCC-EEEEEcCCccCHHHHHhCCe-eEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLGE-VVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g~-~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+++.+... .+ .++++||+.||+.|.+.||+ +|.++ ++.+ ..+|+++.+ +..+.+++.
T Consensus 167 ~~~~~lgi~-~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~---~~~~~~~~~--~~el~~~l~ 226 (231)
T 3kzx_A 167 AALTNINIE-PSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI---IKDILSFKN--FYDIRNFIC 226 (231)
T ss_dssp HHHHHHTCC-CSTTEEEEESSHHHHHHHHHTTCEEEEEC-C--------CCEEESS--HHHHHHHHH
T ss_pred HHHHHcCCC-cccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC---CCCceeeCC--HHHHHHHHH
Confidence 444554443 34 78999999999999999996 77787 5544 357788755 777777664
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=3.9e-06 Score=78.53 Aligned_cols=143 Identities=15% Similarity=0.228 Sum_probs=87.9
Q ss_pred cCCccCCCCeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCceEEcCCchHHHHHHHH
Q 003127 284 KTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFG 363 (845)
Q Consensus 284 KTGTLT~~~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~~ 363 (845)
..||+|-|++++..+...+.. ...+++..+.... ..+.||..+|+++++
T Consensus 13 ~~~tit~gnr~vt~v~~~~g~------------------~e~elL~lAAs~E-------------~~SeHPla~AIv~~A 61 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQGV------------------DEKTLADAAQLAS-------------LADETPEGRSIVILA 61 (156)
T ss_dssp --------CEEEEEEEECTTS------------------CHHHHHHHHHHTT-------------SSCCSHHHHHHHHHH
T ss_pred CCCceecCCCeEEEEEecCCC------------------CHHHHHHHHHHHh-------------CcCCCHHHHHHHHHH
Confidence 479999999999998754321 1123333333222 126799999999999
Q ss_pred HHc-CCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHH
Q 003127 364 LLL-GGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNET 442 (845)
Q Consensus 364 ~~~-~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (845)
++. +......... .....+|++..++.++.+ ++ .-+.+|+++.|...+.. .|.. +. ..+.+.
T Consensus 62 ~~~~~l~~~~~~~~--~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~~l~~~----~gi~--~~----~~~~~~ 124 (156)
T 1svj_A 62 KQRFNLRERDVQSL--HATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIRRHVEA----NGGH--FP----TDVDQK 124 (156)
T ss_dssp HHHTTCCCCCHHHH--TCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHHHHHHH----HTCC--CC----HHHHHH
T ss_pred HHhcCCCccccccc--ccceeeccccCCCCeEEE---CC--EEEEEeCcHHHHHHHHH----cCCC--Cc----HHHHHH
Confidence 887 6543211000 123578999888788744 23 34678998877665542 1211 12 136677
Q ss_pred HHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCCh
Q 003127 443 IEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMRP 490 (845)
Q Consensus 443 ~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~~ 490 (845)
.++++++|.+++.+|. |..++|++++.|++||
T Consensus 125 ~~~la~~G~T~v~VA~----------------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 125 VDQVARQGATPLVVVE----------------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp HHHHHHTTCEEEEEEE----------------TTEEEEEEEEEECCCC
T ss_pred HHHHHhCCCCEEEEEE----------------CCEEEEEEEEecCCCC
Confidence 8899999999999983 4679999999999986
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.30 E-value=8.2e-07 Score=89.92 Aligned_cols=125 Identities=9% Similarity=0.053 Sum_probs=87.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+....+.+|+...-..++.+++.. .....|+--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 158 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQ----------------VYKPDNRVYE 158 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGT----------------CCTTSHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEecccC----------------CCCCCHHHHH
Confidence 467999999999999999999999999999999999999865333333332211 0111222333
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCC---CCcHHHHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~---~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+++.+.-. .+.++++||+.||+.|.+.||+++++-. +..+..+..+|+++.+ +..+...+
T Consensus 159 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l 222 (232)
T 1zrn_A 159 LAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVELF 222 (232)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHTTC
T ss_pred HHHHHcCCC-cccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECC--HHHHHHHH
Confidence 444444433 3578899999999999999999999832 2233445678999855 77766554
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.29 E-value=2.3e-06 Score=86.75 Aligned_cols=120 Identities=11% Similarity=0.067 Sum_probs=87.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|+ .|++++++|+.....+....+.+|+...-..++.+++.. ....|.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 165 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSEDLG--------------------VLKPRP 165 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGTT--------------------CCTTSH
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEeccCC--------------------CCCCCH
Confidence 46789999999999 999999999999999999999999865333333222211 112234
Q ss_pred HHHHHHHhhcC---CEEEEEcCCc-cCHHHHHhCCeeEEeCCCCcH-HHHhccCEEeccCChhHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAGTE-VAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~-ND~~ml~~A~vgIamg~~~~~-~ak~~ad~v~~~~~~~~i~~~ 629 (845)
.+.+.+.+++| +.++++||+. ||+.|.+.||++++|.+.+.. ..+..+|+++.+ +..+..+
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~s--l~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHS--LKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESS--THHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECC--HHHHHHH
Confidence 44555444444 6799999995 999999999999999855442 456789999966 6666653
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.28 E-value=6.5e-07 Score=90.28 Aligned_cols=125 Identities=16% Similarity=0.125 Sum_probs=87.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-..++.+++.. .....|+-..
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 146 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDTFG----------------EKKPSPTPVL 146 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTSSC----------------TTCCTTHHHH
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCcCC----------------CCCCChHHHH
Confidence 468899999999999999999999999999999999999864333333332211 0112233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCC-CCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGI-AGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~-~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+++.+... .+.++++||+.||++|.+.||++ |++.. .+.+.. ..+|+++.+ +..+.+.+.
T Consensus 147 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~--~~el~~~l~ 209 (222)
T 2nyv_A 147 KTLEILGEE-PEKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSR--PSDLVKLMD 209 (222)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESS--TTHHHHHHH
T ss_pred HHHHHhCCC-chhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECC--HHHHHHHHH
Confidence 455555433 36789999999999999999988 65541 222222 678998855 777776664
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.7e-06 Score=88.07 Aligned_cols=124 Identities=10% Similarity=0.081 Sum_probs=84.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+...-..++.+++... ....|+--.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 168 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKI----------------YKPDPRIYQ 168 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGTTC----------------CTTSHHHHH
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEccccCC----------------CCCCHHHHH
Confidence 4679999999999999999999999999999999999998653333333322110 011222233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE---eCCCCcHHHHhcc-CEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA---MGIAGTEVAKESA-DVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa---mg~~~~~~ak~~a-d~v~~~~~~~~i~~~i 630 (845)
.+.+.+.-. .+.++++||+.||+.|.+.||+..+ .| ++.+..+..+ |+++.+ +..+.+.+
T Consensus 169 ~~~~~~~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~~~~~~~~~~~~~~~~--~~el~~~l 232 (240)
T 2no4_A 169 FACDRLGVN-PNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GNPPEYEFAPLKHQVNS--LSELWPLL 232 (240)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEEECTT-CCCCCCTTSCCSEEESS--GGGHHHHH
T ss_pred HHHHHcCCC-cccEEEEeCCHHHHHHHHHCCCEEEEECCC-CCCCcccCCCCceeeCC--HHHHHHHH
Confidence 344444333 3578899999999999999995544 45 3333344567 998855 67766654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.25 E-value=2.5e-06 Score=87.02 Aligned_cols=125 Identities=16% Similarity=0.132 Sum_probs=81.3
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+...- ..++.+++... ....|+
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~~~~~----------------~kp~~~ 169 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAFDVKY----------------GKPNPE 169 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGGGCSS----------------CTTSSH
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecccCCC----------------CCCCCH
Confidence 35679999999999999999999999998877777777 876432 23333322110 011222
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCCcH---H-HHhccCEEeccCChhHHHHHHH
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTE---V-AKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~~~---~-ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
--..+++.+.-. .+.++++||+.||+.|.+.||++ |.+. ++.. . .+..||+++.+ +..+.++++
T Consensus 170 ~~~~~~~~lg~~-~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~~ad~v~~~--~~el~~~l~ 238 (247)
T 3dv9_A 170 PYLMALKKGGFK-PNEALVIENAPLGVQAGVAAGIFTIAVN-TGPLHDNVLLNEGANLLFHS--MPDFNKNWE 238 (247)
T ss_dssp HHHHHHHHHTCC-GGGEEEEECSHHHHHHHHHTTSEEEEEC-CSSSCHHHHHTTTCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHHcCCC-hhheEEEeCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHHhcCCCEEECC--HHHHHHHHH
Confidence 233444444433 36789999999999999999965 3343 3322 2 23479999965 777777664
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.23 E-value=9e-06 Score=82.79 Aligned_cols=125 Identities=15% Similarity=0.095 Sum_probs=84.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++.|+++.++|+.....+....+.+|+...-..++.+++... ....|+--.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 157 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISDFEGV----------------KKPHPKIFK 157 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC----------------CTTCHHHHH
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeCCCCC----------------CCCCHHHHH
Confidence 4678999999999999999999999999989999999998653323333221110 001122223
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeEEe---CCCCcHHHHh---ccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAM---GIAGTEVAKE---SADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgIam---g~~~~~~ak~---~ad~v~~~~~~~~i~~~i~ 631 (845)
.+.+.+... .+.++++||+. ||+.|.+.||++++. | .+.+.... .+|+++.+ +..+.+.+.
T Consensus 158 ~~~~~~g~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g-~~~~~~~~~~~~~~~~i~~--~~el~~~l~ 225 (241)
T 2hoq_A 158 KALKAFNVK-PEEALMVGDRLYSDIYGAKRVGMKTVWFRYG-KHSERELEYRKYADYEIDN--LESLLEVLA 225 (241)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHHTTCEEEEECCS-CCCHHHHTTGGGCSEEESS--TTHHHHHHH
T ss_pred HHHHHcCCC-cccEEEECCCchHhHHHHHHCCCEEEEECCC-CCCcccccccCCCCEEECC--HHHHHHHHH
Confidence 333333322 36789999998 999999999998664 4 33333332 78999865 777766553
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.23 E-value=3.3e-07 Score=93.99 Aligned_cols=51 Identities=22% Similarity=0.259 Sum_probs=41.5
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcC----CccCHHHHHhCC-eeEEeCCCCcHHHHhccC
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESAD 615 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GD----g~ND~~ml~~A~-vgIamg~~~~~~ak~~ad 615 (845)
.+|+..++.|.+. .+.++++|| |.||++||+.|+ +|++|+ |+.|.+|..++
T Consensus 186 v~Kg~al~~L~~~-~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~~~~~~~ 241 (246)
T 3f9r_A 186 WDKTYCLQFVEDD-FEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDTIAEVEK 241 (246)
T ss_dssp CSGGGGGGGTTTT-CSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHHHHHHHH
T ss_pred CCHHHHHHHHHcC-cccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHHHHHHHH
Confidence 4677777777763 678999999 699999999996 899999 88888776544
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.23 E-value=8e-07 Score=91.24 Aligned_cols=118 Identities=14% Similarity=0.140 Sum_probs=79.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCc--ccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGP--EFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-lgi~~~~~~~i~g~--~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
++.+++.+.++.|++.|+++.++|+.....+.....+ .|+...-..++.++ +.. ...
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~--------------------~~K 171 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQ--------------------HGK 171 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCC--------------------SCT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhcc--------------------CCC
Confidence 4788999999999999999999999987665544322 34432222222222 110 011
Q ss_pred cHHHHHHHHHhhcC-----CEEEEEcCCccCHHHHHhCC---eeEEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 564 DKHTLVKHLRTTLG-----EVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 564 ~K~~~v~~l~~~~g-----~~v~~~GDg~ND~~ml~~A~---vgIamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
.|..+.+.+.+++| +.++++||+.||+.|.+.|| ++|++| ++.+..+..||+++.+ +..+.
T Consensus 172 p~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~ad~v~~s--l~el~ 240 (250)
T 3l5k_A 172 PDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLSRDLTTKATLVLNS--LQDFQ 240 (250)
T ss_dssp TSTHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSCGGGSTTSSEECSC--GGGCC
T ss_pred CChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCchhhcccccEeecC--HHHhh
Confidence 22334444444434 67999999999999999999 666678 6666788999999965 55443
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.5e-06 Score=88.62 Aligned_cols=123 Identities=15% Similarity=0.165 Sum_probs=81.5
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHH
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 567 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 567 (845)
+.|++.+.++.|+++|+++.++|+.+...+....+.+|+. .-..++.+++.. .....|+-=..
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~~~~----------------~~Kp~p~~~~~ 173 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEKSGI----------------RRKPAPDMTSE 173 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEECTTS----------------CCTTSSHHHHH
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecCCCC----------------CCCCCHHHHHH
Confidence 5688999999999999999999999988889999999875 332333322110 00011221233
Q ss_pred HHHHHHhhcCCEEEEEcCCccCHHHHHhCCee---EEeCCCCcHHHH-hccCEEeccCChhHHHHHH
Q 003127 568 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIG---LAMGIAGTEVAK-ESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 568 ~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg---Iamg~~~~~~ak-~~ad~v~~~~~~~~i~~~i 630 (845)
+.+.+.-. .+.++++||+.||+.|.+.||+. +++|....+..+ ..||+++.+ +..+...+
T Consensus 174 ~~~~l~~~-~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~--~~el~~~l 237 (240)
T 2hi0_A 174 CVKVLGVP-RDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDT--AEKLEEAI 237 (240)
T ss_dssp HHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECS--HHHHHHHH
T ss_pred HHHHcCCC-HHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECC--HHHHHHHh
Confidence 33333322 36789999999999999999994 555522224443 468998854 66665544
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.22 E-value=1.6e-06 Score=89.46 Aligned_cols=124 Identities=14% Similarity=0.101 Sum_probs=85.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCce-eeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~-~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.+++.+.++.|++.|++++++|+.....+....+.+|+...-.. ++.+++.. . ....|
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~~~~---------------~----~~Kp~ 170 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPSWVG---------------G----RGKPH 170 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGGGGT---------------T----CCTTS
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHhhcC---------------c----CCCCC
Confidence 3568999999999999999999999999999999999998532112 22221110 0 01112
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCee-EEeCCCC-------cHH-HHhccCEEeccCChhHHHHHHHH
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAG-------TEV-AKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~-------~~~-ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
..+.+.+.+++| +.++++||+.||+.|.+.||++ +.+. +| .+. .+..||+++.+ +..+.++++.
T Consensus 171 ~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~~ad~vi~~--l~el~~~l~~ 246 (259)
T 4eek_A 171 PDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL-VPGHPHPDGAAALSRLGAARVLTS--HAELRAALAE 246 (259)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC-CTTSCCSSCHHHHHHHTCSEEECS--HHHHHHHHHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc-cCCCcccccHHHHHhcCcchhhCC--HHHHHHHHHh
Confidence 333444443334 6799999999999999999998 4453 33 233 34559999965 8888887764
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=98.19 E-value=1.8e-06 Score=87.89 Aligned_cols=137 Identities=15% Similarity=0.134 Sum_probs=90.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc--CCeeEEEEeChhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI--PKIQVMARSSPMD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~--~~~~v~~~~~p~~ 564 (845)
++.|++.+.++.|+++|++++++|+.+...+..+.+ |+... ..++.++....- ..+.... +....+.+.....
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~~--~~~~~~~~kp~p~~~~~~~~~~ 151 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFDN--DYIHIDWPHSCKGTCSNQCGCC 151 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECSS--SBCEEECTTCCCTTCCSCCSSC
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEcC--CceEEecCCCCccccccccCCc
Confidence 578999999999999999999999999988888887 76433 334433321110 0000000 0000000112346
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhc--cCEEeccCChhHHHHHHHH
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES--ADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~--ad~v~~~~~~~~i~~~i~~ 632 (845)
|..+++.+... .+.++++||+.||++|.+.||+.++.. ...+..++. +|+++. ++..+.+.+..
T Consensus 152 K~~~~~~~~~~-~~~~~~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~~~~~~~~~~~--~~~el~~~l~~ 217 (236)
T 2fea_A 152 KPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHLPYQ--DFYEIRKEIEN 217 (236)
T ss_dssp HHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEECCS--SHHHHHHHHHT
T ss_pred HHHHHHHHhcc-CCeEEEEeCChHHHHHHHhCCeeeech-HHHHHHHHCCCCeeecC--CHHHHHHHHHH
Confidence 88899888766 688999999999999999999998753 222333333 777774 48888776654
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.19 E-value=5.5e-06 Score=83.84 Aligned_cols=122 Identities=11% Similarity=0.056 Sum_probs=87.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++. +++.++|+.....+....+.+|+...-..++.+++.. ....|.
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 161 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSEDTG--------------------FQKPMK 161 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGGGTT--------------------SCTTCH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEecccC--------------------CCCCCh
Confidence 5678999999999999 9999999999999999999999865332333222111 012234
Q ss_pred HHHHHHHhhcC----CEEEEEcCCc-cCHHHHHhCCeeEEeCCCC--cHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLG----EVVAVTGDGT-NDAPALHEADIGLAMGIAG--TEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g----~~v~~~GDg~-ND~~ml~~A~vgIamg~~~--~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+.+.+.+++| +.++++||+. ||+.|.+.||++.++-.++ .+..+..||+++.+ +..+.+++.
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~--~~el~~~l~ 231 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRK--LEELYHILN 231 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESS--GGGHHHHHT
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECC--HHHHHHHHH
Confidence 45555544445 5799999998 9999999999964432244 44567789999965 777777664
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.18 E-value=2.1e-06 Score=86.47 Aligned_cols=118 Identities=12% Similarity=0.179 Sum_probs=80.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeCh--h
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~ 563 (845)
++.+++.+.++.++. +++++|+..........+.+|+...- ..++.++.. ... .
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~--------------------~~~~~k 143 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDL--------------------GADRVK 143 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHH--------------------CTTCCT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEecccc--------------------ccCCCC
Confidence 356778888887764 89999999999999999999886422 222222110 011 2
Q ss_pred cHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCee-EEeCCCCcH-------HHHhc-cCEEeccCChhHHHHHH
Q 003127 564 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIG-LAMGIAGTE-------VAKES-ADVIILDDNFSTIVTVA 630 (845)
Q Consensus 564 ~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~~~-------~ak~~-ad~v~~~~~~~~i~~~i 630 (845)
.|...++.+.+++| +.++++||+.||++|++.||++ ++++ ++.+ ..++. ||+++.+ +..+.+.+
T Consensus 144 pk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~~~~~~~~~~l~~~~ad~v~~~--~~el~~~l 219 (229)
T 2fdr_A 144 PKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 219 (229)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred cCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCCccchhhhHHHhhcCCceeecC--HHHHHHHH
Confidence 34444444444334 6788999999999999999998 6676 5543 36676 9999965 66666655
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.18 E-value=1.8e-06 Score=88.66 Aligned_cols=120 Identities=13% Similarity=0.077 Sum_probs=85.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+.. ..++.++... ....|.
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f--~~~~~~~~~~--------------------~~kp~~ 176 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW--DMLLCADLFG--------------------HYKPDP 176 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC--SEECCHHHHT--------------------CCTTSH
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc--ceEEeecccc--------------------cCCCCH
Confidence 4568999999999985 9999999999999999999999851 1222111100 112344
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCC----CCc---HHH--HhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI----AGT---EVA--KESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~----~~~---~~a--k~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+.+.+.+++| +.++++||+.||+.|.+.||++++|.+ .|. +.. +..||+++.+ +..+.+++.
T Consensus 177 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~--l~el~~~l~ 251 (254)
T 3umc_A 177 QVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASD--LLDLHRQLA 251 (254)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECC--HHHHHHHhc
Confidence 44444444434 679999999999999999999999984 122 223 6789999965 777777653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.16 E-value=2.6e-06 Score=85.81 Aligned_cols=115 Identities=11% Similarity=0.092 Sum_probs=83.0
Q ss_pred CCChhHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.+++.+.++.|++.| +++.++|+..........+.+|+...... +++.. ..|
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~-----------------------~~~~~--kpk 159 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDH-----------------------IEVMS--DKT 159 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSE-----------------------EEEES--CCS
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhhe-----------------------eeecC--CCC
Confidence 46789999999999999 99999999999888999999998642111 22222 235
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCc-cCHHHHHhCCeeEEe-------CCCCcHHHHhcc-CEEeccCChhHHHHH
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAM-------GIAGTEVAKESA-DVIILDDNFSTIVTV 629 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~-ND~~ml~~A~vgIam-------g~~~~~~ak~~a-d~v~~~~~~~~i~~~ 629 (845)
...++.+.+++| +.++++||+. ||+.|.+.||+++++ | ++.+..+..+ |+++.+ +..+.++
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g-~~~~~~~~~~~d~v~~~--l~el~~~ 232 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWK-HEVTETFAHERLKQVKR--LDDLLSL 232 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCC-CC---CCCCTTEEECSS--GGGHHHH
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccc-cCCcccccCCCceeccc--HHHHHHh
Confidence 556665555545 6789999996 999999999999887 3 3333323444 888865 6666554
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=98.15 E-value=5e-06 Score=82.09 Aligned_cols=122 Identities=14% Similarity=0.098 Sum_probs=83.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+ ++.|+++ +++.++|+.+...+..+.+.+|+...-..++.+++... ....|+--.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~----------------~Kp~~~~~~ 135 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAESVKE----------------YKPSPKVYK 135 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC----------------CTTCHHHHH
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehhhcCC----------------CCCCHHHHH
Confidence 46789999 9999999 99999999999999999999998653333333322110 011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCC---CCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~---~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+++.+. .+.++++||+.||+.|.+.||++.++-. ++.+..+..+|+++.+ +..+.+.+.
T Consensus 136 ~~~~~~~---~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~el~~~l~ 198 (201)
T 2w43_A 136 YFLDSIG---AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVND--FKELYEWIL 198 (201)
T ss_dssp HHHHHHT---CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESS--HHHHHHHHH
T ss_pred HHHHhcC---CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECC--HHHHHHHHH
Confidence 3444443 3568889999999999999999988721 3333345578998865 777766553
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=3.7e-06 Score=83.83 Aligned_cols=116 Identities=16% Similarity=0.137 Sum_probs=84.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|++ |+++.++|+.+...+....+.+|+...-..+ +.+...+..|.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i----------------------~~~~~~~Kp~p 140 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGI----------------------YGSSPEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEE----------------------EEECSSCCSHH
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeee----------------------ecCCCCCCCCh
Confidence 357899999999999 9999999999988888899999986432111 21221223455
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCe---eEEeCCCC-cHHHH-hccCEEeccCChhHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI---GLAMGIAG-TEVAK-ESADVIILDDNFSTIVT 628 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~v---gIamg~~~-~~~ak-~~ad~v~~~~~~~~i~~ 628 (845)
.+.+.+.+++| +.++++||+.||+.|.++||+ ++++| ++ .+..+ ..||+++.+ +..+.+
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~~a~~v~~~--~~el~~ 207 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FGEQADLLNYQPDYIAHK--PLEVLA 207 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SSCHHHHHTTCCSEEESS--TTHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHhCCCCEEECC--HHHHHH
Confidence 56666555545 579999999999999999999 77777 44 44444 368999865 555543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=3e-06 Score=84.66 Aligned_cols=136 Identities=16% Similarity=0.152 Sum_probs=82.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN---------------INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~---------------~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++.|++.+++++|+++|++++++|+.. ...+....+++|+. -...+...........+ .
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f~~~~~~~~~~~~~~~~----~- 123 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDGIYYCPHHPQGSVEE----F- 123 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSEEEEECCBTTCSSGG----G-
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-eEEEEECCcCCCCcccc----c-
Confidence 688999999999999999999999999 46778888888885 11122221110000000 0
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee----EEeCCCCcHHHHhccCEEeccCChhHHH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG----LAMGIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg----Iamg~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
.......+..|+--..+++.+.-. .+.++++||+.||+.|.+.||+. +..|....+.....+|+++.+ +..+.
T Consensus 124 ~~~~~~~KP~p~~~~~~~~~lgi~-~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~--l~el~ 200 (211)
T 2gmw_A 124 RQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLP 200 (211)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHH
T ss_pred CccCcCCCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCC--HHHHH
Confidence 000000111222233344444333 36788999999999999999954 333422233344568999855 77777
Q ss_pred HHHH
Q 003127 628 TVAK 631 (845)
Q Consensus 628 ~~i~ 631 (845)
+++.
T Consensus 201 ~~l~ 204 (211)
T 2gmw_A 201 QAIK 204 (211)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.14 E-value=3.9e-06 Score=85.85 Aligned_cols=121 Identities=15% Similarity=0.157 Sum_probs=87.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++. +++.++|+........+.+.+|+.. ..++.++... ....|.
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f--~~~~~~~~~~--------------------~~kp~~ 172 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW--DVIIGSDINR--------------------KYKPDP 172 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC--SCCCCHHHHT--------------------CCTTSH
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe--eEEEEcCcCC--------------------CCCCCH
Confidence 5678999999999997 9999999999999999999999851 1111111100 012234
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCC----Cc---HH--HHhccCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIA----GT---EV--AKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~----~~---~~--ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+.+.+.+++| +.++++||+.||+.|.+.||++++|.+. |. +. .+..+|+++.+ +..+.+++..
T Consensus 173 ~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~--~~el~~~l~~ 248 (254)
T 3umg_A 173 QAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATD--ITDLAAQLRA 248 (254)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESS--HHHHHHHHHH
T ss_pred HHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECC--HHHHHHHhcC
Confidence 45555555545 6799999999999999999999999842 21 11 36778999965 8888887754
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.11 E-value=9.4e-07 Score=96.31 Aligned_cols=108 Identities=16% Similarity=0.177 Sum_probs=74.5
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc--CCceeeeCcccccCCHHHHhhhcCCeeEEEE----
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT--DNGIAIEGPEFREKSDEELSKLIPKIQVMAR---- 559 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~--~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~---- 559 (845)
-++.|++++.++.||++|++|+++||.....++.+|+++|+.. +...++ |..+....+ -....+
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vi-g~~l~~~~d---------G~~tg~~~~~ 289 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVL-GLRLMKDDE---------GKILPKFDKD 289 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEE-EECEEECTT---------CCEEEEECTT
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEE-EeEEEEecC---------CceeeeecCc
Confidence 4578999999999999999999999999999999999998742 122233 111111100 011122
Q ss_pred ---eChhcHHHHHHHHHhh-cC-CEEEEEcCCccCHHHHHh-CCeeEEeC
Q 003127 560 ---SSPMDKHTLVKHLRTT-LG-EVVAVTGDGTNDAPALHE-ADIGLAMG 603 (845)
Q Consensus 560 ---~~p~~K~~~v~~l~~~-~g-~~v~~~GDg~ND~~ml~~-A~vgIamg 603 (845)
+..+.|...++.+... .| ..++++|||.||++||++ +|.++++.
T Consensus 290 ~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~li 339 (385)
T 4gxt_A 290 FPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLI 339 (385)
T ss_dssp SCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEE
T ss_pred cceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEE
Confidence 2346799998876432 12 457788999999999996 55555544
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.11 E-value=5.4e-06 Score=85.25 Aligned_cols=124 Identities=12% Similarity=0.119 Sum_probs=85.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+ |+++.++|+.+...+....+.+|+...-..++.+++.. .....|+--.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 154 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKR----------------VFKPHPDSYA 154 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGT----------------CCTTSHHHHH
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEccccC----------------CCCCCHHHHH
Confidence 57799999999999 99999999999999999999999865332333322211 0011222233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCC-----------------------C---cHHHHhccCEEecc
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA-----------------------G---TEVAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~-----------------------~---~~~ak~~ad~v~~~ 620 (845)
.+++.+.-. .+.++++||+.||+.|.+.||++.++.+. + .+..+..+|+++.+
T Consensus 155 ~~~~~~~~~-~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (253)
T 1qq5_A 155 LVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPA 233 (253)
T ss_dssp HHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESS
T ss_pred HHHHHcCCC-HHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeCC
Confidence 344444322 36788999999999999999999998733 1 22334568999855
Q ss_pred CChhHHHHHHH
Q 003127 621 DNFSTIVTVAK 631 (845)
Q Consensus 621 ~~~~~i~~~i~ 631 (845)
+..+.+.+.
T Consensus 234 --~~el~~~l~ 242 (253)
T 1qq5_A 234 --LGDLPRLVR 242 (253)
T ss_dssp --GGGHHHHHH
T ss_pred --HHHHHHHHH
Confidence 777776653
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.10 E-value=7.4e-07 Score=88.68 Aligned_cols=115 Identities=13% Similarity=0.200 Sum_probs=80.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH-
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK- 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K- 565 (845)
++.+++.+.++.|++. +++.++|+.+...+....+.+|+...-..++.+++ ....|
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~----------------------~~~~KP 139 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISADD----------------------TPKRKP 139 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGG----------------------SSCCTT
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecCc----------------------CCCCCC
Confidence 4678999999999999 99999999999999999998887542112222211 11233
Q ss_pred -HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCC---CCcHHHHhccCEEeccCChhHHH
Q 003127 566 -HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 566 -~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~---~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
....+.+.+++| +.++++||+.||++|.+.||++++|.+ .+.+..++ ||+++.+ +..+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~--~~el~ 205 (209)
T 2hdo_A 140 DPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQK--PLDIL 205 (209)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESS--GGGGG
T ss_pred CcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCC--HHHHH
Confidence 333333333323 678999999999999999999999852 13444555 9999865 44443
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.10 E-value=6e-06 Score=80.48 Aligned_cols=106 Identities=15% Similarity=0.039 Sum_probs=72.8
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHH
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHT 567 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 567 (845)
+.+++.+.++.|++.|++++++|+... .+....+.+|+...-..++.+++.. . ...|..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~~~~------------------~--~kp~~~ 141 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSSSGF------------------K--RKPNPE 141 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGGGCC------------------C--CTTSCH
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeeccccC------------------C--CCCCHH
Confidence 578999999999999999999999874 5777888888764222222221110 0 112333
Q ss_pred HHHHHHhhcCC-EEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC
Q 003127 568 LVKHLRTTLGE-VVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD 615 (845)
Q Consensus 568 ~v~~l~~~~g~-~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad 615 (845)
..+.+.+++|- .++++||+.||++|.+.||+++++. +..+..++..+
T Consensus 142 ~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~~~~~~~~~l~ 189 (190)
T 2fi1_A 142 SMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLD 189 (190)
T ss_dssp HHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHT
T ss_pred HHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEE-CCCCChhhccC
Confidence 44444444342 6889999999999999999999987 55555565544
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.09 E-value=4.7e-06 Score=87.00 Aligned_cols=114 Identities=15% Similarity=0.082 Sum_probs=80.0
Q ss_pred CChhHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 488 MRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 488 l~~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+.. -..++.+++... ....|+--.
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~-f~~i~~~~~~~~----------------~kp~~~~~~ 177 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKR-PEYFITANDVKQ----------------GKPHPEPYL 177 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCC-CSSEECGGGCSS----------------CTTSSHHHH
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCc-cCEEEEcccCCC----------------CCCChHHHH
Confidence 468999999999999 99999999999999999999998753 223333332110 011233334
Q ss_pred HHHHHHHh-------hcCCEEEEEcCCccCHHHHHhCCeeEEe---CCCCcHHHH-hccCEEecc
Q 003127 567 TLVKHLRT-------TLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAK-ESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~-------~~g~~v~~~GDg~ND~~ml~~A~vgIam---g~~~~~~ak-~~ad~v~~~ 620 (845)
.+.+.+.. . .+.++++||+.||++|++.||++++| | ++.+..+ ..||+++.+
T Consensus 178 ~~~~~lgi~~~~~~~~-~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~-~~~~~~~~~~ad~v~~~ 240 (275)
T 2qlt_A 178 KGRNGLGFPINEQDPS-KSKVVVFEDAPAGIAAGKAAGCKIVGIATT-FDLDFLKEKGCDIIVKN 240 (275)
T ss_dssp HHHHHTTCCCCSSCGG-GSCEEEEESSHHHHHHHHHTTCEEEEESSS-SCHHHHTTSSCSEEESS
T ss_pred HHHHHcCCCccccCCC-cceEEEEeCCHHHHHHHHHcCCEEEEECCC-CCHHHHhhCCCCEEECC
Confidence 45555544 4 45789999999999999999977766 5 3333334 469999865
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.04 E-value=4.5e-06 Score=86.72 Aligned_cols=50 Identities=18% Similarity=0.206 Sum_probs=40.6
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 529 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~lgi~~~ 529 (845)
|++.-.+++.++++++|++++++|++++++|| |+........+++|+..+
T Consensus 17 GTLl~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 17 GVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTTEETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CcEECCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 33333556678999999999999999999999 778888888888888643
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.98 E-value=4.6e-06 Score=86.53 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=38.2
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTD 529 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~lgi~~~ 529 (845)
.+++.++++++|++++++|++++++|| |+........+++|+...
T Consensus 20 ~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 20 GTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 345668899999999999999999988 778888888889998643
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.4e-05 Score=77.96 Aligned_cols=90 Identities=14% Similarity=0.117 Sum_probs=67.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN-INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~-~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+++++|+++|++++++||++ ...+..+.+.+|+...-.. ++ ..+..|
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~-----------------------~~--~~~~~k 122 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVH-----------------------RE--IYPGSK 122 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEE-----------------------EE--ESSSCH
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcce-----------------------eE--EEeCch
Confidence 678999999999999999999999999 7999999999998642100 11 122344
Q ss_pred HHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 566 HTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 566 ~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
....+.+.+++| +.++++||+.+|+.+.+.||+...
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i 161 (187)
T 2wm8_A 123 ITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCI 161 (187)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEE
Confidence 444444433334 578899999999999999998654
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.3e-05 Score=80.98 Aligned_cols=123 Identities=13% Similarity=0.134 Sum_probs=82.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++ |+++.++|+.+........+.++-. -..++.+++.. ....+|+-..
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~~--fd~i~~~~~~~----------------~~KP~~~~~~ 159 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGVE--FDHIITAQDVG----------------SYKPNPNNFT 159 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCSC--CSEEEEHHHHT----------------SCTTSHHHHH
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCCc--cCEEEEccccC----------------CCCCCHHHHH
Confidence 578999999999999 8999999999988887777664421 11222221110 0112333333
Q ss_pred HHHHHHHhhcC---CEEEEEcCCc-cCHHHHHhCCeeEEeCCCC----------cHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMGIAG----------TEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~-ND~~ml~~A~vgIamg~~~----------~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+++.+++ +| +.++++||+. ||+.|.+.||++++|.+.+ .+..+..||+++.+ +..+.+++.
T Consensus 160 ~~l~~~~~-lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~--~~el~~~l~ 235 (240)
T 3smv_A 160 YMIDALAK-AGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNS--MGEMAEAHK 235 (240)
T ss_dssp HHHHHHHH-TTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESS--HHHHHHHHH
T ss_pred HHHHHHHh-cCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCC--HHHHHHHHH
Confidence 55443332 24 6789999996 9999999999999996322 13345789999965 777777664
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.94 E-value=7.4e-06 Score=84.83 Aligned_cols=125 Identities=10% Similarity=0.180 Sum_probs=85.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|++.|+++.++|+.... ...+.+.+|+...-..++.+++.. .....|+--.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 168 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSEAAG----------------WPKPDPRIFQ 168 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHHHHS----------------SCTTSHHHHH
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeecccC----------------CCCCCHHHHH
Confidence 35799999999999999999999997664 688888999864322222221110 0111233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeEEeCCCCcHH-----HHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGTEV-----AKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgIamg~~~~~~-----ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+++.+.-. .+.++++||+. ||+.|.+.||++++|.+.+... ....||+++.+ +..+.+++.
T Consensus 169 ~~~~~~g~~-~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~--l~el~~~l~ 236 (263)
T 3k1z_A 169 EALRLAHME-PVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPS--LAHLLPALD 236 (263)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESS--GGGHHHHHH
T ss_pred HHHHHcCCC-HHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCC--HHHHHHHHH
Confidence 444444433 36799999997 9999999999999998444321 22368999865 777777664
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.84 E-value=8.1e-05 Score=76.12 Aligned_cols=118 Identities=15% Similarity=0.130 Sum_probs=80.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeC--hhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSS--PMD 564 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~--p~~ 564 (845)
++.+++.+.++.|+ .|+++.++|+.....+....+.+|+...-.. +++... |+-
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~-----------------------i~~~~kp~~~~ 167 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR-----------------------IEVVSEKDPQT 167 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC-----------------------EEEESCCSHHH
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce-----------------------eeeeCCCCHHH
Confidence 45789999999999 9999999999999888888888887642111 222222 222
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCeeEEeCCCCcH--------HHHhccCE-EeccCChhHHHHHHH
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIGLAMGIAGTE--------VAKESADV-IILDDNFSTIVTVAK 631 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vgIamg~~~~~--------~ak~~ad~-v~~~~~~~~i~~~i~ 631 (845)
-..+++.+.-. .+.++++||+. ||+.|.+.||+++++=..+.. .....+|+ ++.+ +..+..++.
T Consensus 168 ~~~~~~~l~~~-~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~~l~ 241 (251)
T 2pke_A 168 YARVLSEFDLP-AERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPD--PSGWPAAVR 241 (251)
T ss_dssp HHHHHHHHTCC-GGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSS--GGGHHHHHH
T ss_pred HHHHHHHhCcC-chhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCC--HHHHHHHHH
Confidence 23344444333 36789999999 999999999999886433321 11345787 7754 777766653
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.82 E-value=6.9e-05 Score=73.19 Aligned_cols=136 Identities=10% Similarity=0.061 Sum_probs=89.1
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCH---HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNI---NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~---~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
-++.|++.+++++|+++|+++.++|+... ..+....+.+|+...-..++...+.... .-.....|
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~------------~~~~KP~p 100 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQP------------GKMEKPDK 100 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSST------------TCCCTTSH
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccc------------cCCCCcCH
Confidence 36889999999999999999999998876 8899999999986532223322211000 00001122
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeEEeCCCCcH-----HHH-hccCEEeccCChhHHHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAMGIAGTE-----VAK-ESADVIILDDNFSTIVTVAKWGR 634 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgIamg~~~~~-----~ak-~~ad~v~~~~~~~~i~~~i~~gR 634 (845)
+--..+++.+... .+.++++||+ .+|+.+-+.||+....-.++.. ... ..+|+++...++..+.++++..+
T Consensus 101 ~~~~~~~~~~~~~-~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l~l~~ 178 (189)
T 3ib6_A 101 TIFDFTLNALQID-KTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEALLLLK 178 (189)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHHHHHH
T ss_pred HHHHHHHHHcCCC-cccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHHHHHH
Confidence 2233444444433 3679999999 7999999999997653213221 111 26889998556888888876544
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.81 E-value=9.1e-05 Score=73.74 Aligned_cols=124 Identities=19% Similarity=0.231 Sum_probs=83.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|++.|+++.++|+.+...+....+.+|+...-..++.+++... ....|+-=.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~----------------~KP~p~~~~ 147 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKN----------------GKPDPEIYL 147 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSS----------------CTTSTHHHH
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCC----------------CcccHHHHH
Confidence 3578999999999999999999999999999999999999764333433332210 112333334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE----EeCCCCcHHHHhc-cCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL----AMGIAGTEVAKES-ADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI----amg~~~~~~ak~~-ad~v~~~~~~~~i~~~i 630 (845)
.+++.+.-. .+.++++||+.+|+.+-++||+.. .-|.+..+..+++ ++.+. + .+.+.+.+
T Consensus 148 ~a~~~lg~~-p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~-~--~~eli~~l 212 (216)
T 3kbb_A 148 LVLERLNVV-PEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALV-K--PEEILNVL 212 (216)
T ss_dssp HHHHHHTCC-GGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEE-C--GGGHHHHH
T ss_pred HHHHhhCCC-ccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEEC-C--HHHHHHHH
Confidence 555555544 467899999999999999999853 3343344444444 45544 3 34445444
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=3.8e-05 Score=79.74 Aligned_cols=44 Identities=16% Similarity=0.154 Sum_probs=39.5
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 528 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~lgi~~ 528 (845)
.+++.+++.+++++++++|++++++| ||.........+++|+..
T Consensus 31 ~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 31 DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 36678999999999999999999999 999999988899998864
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.70 E-value=3e-05 Score=76.20 Aligned_cols=102 Identities=9% Similarity=0.011 Sum_probs=71.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|++.| +++++|+.+........+.+|+...-..++.+.+.. ....+|+--.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~~~~----------------~~Kp~~~~~~ 148 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSSALG----------------VMKPNPAMYR 148 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHHHHS----------------CCTTCHHHHH
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeecccC----------------CCCCCHHHHH
Confidence 36799999999999999 999999999999999999999864322222221110 0111222233
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCC
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 606 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~ 606 (845)
.+++.+... .+.++++||+.||++|.+.||+..++-..+
T Consensus 149 ~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 149 LGLTLAQVR-PEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HHHHHcCCC-HHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 444444433 367889999999999999999998876333
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.70 E-value=1.6e-05 Score=78.93 Aligned_cols=101 Identities=5% Similarity=-0.067 Sum_probs=68.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH------cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE------CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~------lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
++.|++.+.++.|++ |++++++|+.....+..+.+. .|+...-..++.+++.. ....
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~~~~----------------~~Kp 151 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASCQMG----------------KYKP 151 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHHHHT----------------CCTT
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeecccC----------------CCCC
Confidence 457899999999999 999999999998888877776 56643222222111100 0011
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCC
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIA 605 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~ 605 (845)
.|+--..+++.+.-. .+.++++||+.||++|.+.||++.++.+.
T Consensus 152 ~~~~~~~~~~~~~~~-~~~~~~igD~~~Di~~a~~aG~~~~~~~~ 195 (211)
T 2i6x_A 152 NEDIFLEMIADSGMK-PEETLFIDDGPANVATAERLGFHTYCPDN 195 (211)
T ss_dssp SHHHHHHHHHHHCCC-GGGEEEECSCHHHHHHHHHTTCEEECCCT
T ss_pred CHHHHHHHHHHhCCC-hHHeEEeCCCHHHHHHHHHcCCEEEEECC
Confidence 222223344444333 36789999999999999999999999833
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.67 E-value=2.2e-05 Score=78.72 Aligned_cols=132 Identities=16% Similarity=0.110 Sum_probs=75.8
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCceeeeCccc-ccCCHHHHhh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNI---------------NTAKAIARECGILTDNGIAIEGPEF-REKSDEELSK 549 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~---------------~ta~~ia~~lgi~~~~~~~i~g~~~-~~~~~~~~~~ 549 (845)
.++.|++.+++++|+++|++++++|++.. ..+....+++|+.-. ......... .... +
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~~~~~g~~~-----~ 128 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD-MVLACAYHEAGVGP-----L 128 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCCTTCCST-----T
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee-eEEEeecCCCCcee-----e
Confidence 56889999999999999999999999988 678888889887411 111110000 0000 0
Q ss_pred hcCCeeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeE-EeCCCCc---HHHHhccCEEeccCC
Q 003127 550 LIPKIQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGL-AMGIAGT---EVAKESADVIILDDN 622 (845)
Q Consensus 550 ~~~~~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgI-amg~~~~---~~ak~~ad~v~~~~~ 622 (845)
.... + .....|..+.+.+.+++| +.++|+||+.||+.|.+.||+.. .+-..|. +.....+|+++.+
T Consensus 129 ~~~~--~---~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~-- 201 (218)
T 2o2x_A 129 AIPD--H---PMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSE-- 201 (218)
T ss_dssp CCSS--C---TTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHH--
T ss_pred cccC--C---ccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEeccc--
Confidence 0000 0 001112233333333323 57899999999999999999765 3211222 1122345555543
Q ss_pred hhHHHHHH
Q 003127 623 FSTIVTVA 630 (845)
Q Consensus 623 ~~~i~~~i 630 (845)
+..+.+++
T Consensus 202 l~el~~~l 209 (218)
T 2o2x_A 202 LGDLLAAI 209 (218)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555444
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00073 Score=69.49 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=37.0
Q ss_pred CChhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCcc
Q 003127 488 MRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILT 528 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~lgi~~ 528 (845)
+.+++.++++.+++.|++++++| |++........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 66889999999999999999999 999999998888888753
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.61 E-value=7e-06 Score=84.16 Aligned_cols=55 Identities=18% Similarity=0.258 Sum_probs=45.3
Q ss_pred hhcHHHHHHHHHhhc-CCEEEEEcC----CccCHHHHHhCCe-eEEeCCCCcHHHHhccCEEe
Q 003127 562 PMDKHTLVKHLRTTL-GEVVAVTGD----GTNDAPALHEADI-GLAMGIAGTEVAKESADVII 618 (845)
Q Consensus 562 p~~K~~~v~~l~~~~-g~~v~~~GD----g~ND~~ml~~A~v-gIamg~~~~~~ak~~ad~v~ 618 (845)
..+|+..++.+ ... .+.++++|| |.||++||+.||. |++|| |+.+.+|+.||+|.
T Consensus 186 ~~~Kg~al~~l-~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 186 GWDKRYCLRHV-ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDTRRICELLFS 246 (246)
T ss_dssp TCSGGGGGGGT-TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHHHHHHHHHCC
T ss_pred CCchHHHHHHH-hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHHHHHHHhhcC
Confidence 36899999988 221 268999999 9999999999998 99999 99999999999863
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00023 Score=73.38 Aligned_cols=123 Identities=12% Similarity=0.137 Sum_probs=83.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|++ |+++.++|+.+...+....+.+|+...-..++.+++... .+..|+--.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~~~~~----------------~KP~p~~~~ 183 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQKE----------------EKPAPSIFY 183 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSSS----------------CTTCHHHHH
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecCCCCC----------------CCCCHHHHH
Confidence 578999999999998 599999999999999999999998753333333322110 111223333
Q ss_pred HHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCe--eEEeCCCCcH---HHHhccCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDG-TNDAPALHEADI--GLAMGIAGTE---VAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~v--gIamg~~~~~---~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.+++.+.-. .+.++++||+ .||+.+-+.||+ .|.++ .+.. .....+|+++.+ +..+.+++
T Consensus 184 ~~~~~~~~~-~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~-~~~~~~~~~~~~~~~~i~~--~~el~~~l 249 (260)
T 2gfh_A 184 HCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWIN-KSGRVPLTSSPMPHYMVSS--VLELPALL 249 (260)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEEC-TTCCCCSSCCCCCSEEESS--GGGHHHHH
T ss_pred HHHHHcCCC-hhhEEEECCCchhhHHHHHHCCCceEEEEc-CCCCCcCcccCCCCEEECC--HHHHHHHH
Confidence 444444433 3678999995 999999999999 67776 3322 133568988865 66666554
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00017 Score=73.16 Aligned_cols=57 Identities=14% Similarity=0.152 Sum_probs=40.6
Q ss_pred cHHHHHHHHHhhcC---CEEEEEcCC-ccCHHHHHhCCeeEE---eCCCCcHHHH---hccCEEecc
Q 003127 564 DKHTLVKHLRTTLG---EVVAVTGDG-TNDAPALHEADIGLA---MGIAGTEVAK---ESADVIILD 620 (845)
Q Consensus 564 ~K~~~v~~l~~~~g---~~v~~~GDg-~ND~~ml~~A~vgIa---mg~~~~~~ak---~~ad~v~~~ 620 (845)
.|...++.+.+++| +.++++||+ .||++|++.||++++ +|....+..+ ..||+++.+
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~ 243 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPS 243 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESS
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECC
Confidence 35566666665555 679999999 799999999999855 4522224444 468998864
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.48 E-value=3.5e-05 Score=70.50 Aligned_cols=99 Identities=10% Similarity=0.031 Sum_probs=66.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+++++|+++|+++.++|+++...+....+.+|+...-..++.+.+.. ..+..|+--.
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~Kp~~~~~~ 81 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSGELG----------------VEKPEEAAFQ 81 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHHHHS----------------CCTTSHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEeccCC----------------CCCCCHHHHH
Confidence 467889999999999999999999999888888888888754322222211100 0011222222
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM 602 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam 602 (845)
.+.+.+... .+.++++||+.+|+.+.+.+|+....
T Consensus 82 ~~~~~~~~~-~~~~~~vgD~~~di~~a~~~G~~~i~ 116 (137)
T 2pr7_A 82 AAADAIDLP-MRDCVLVDDSILNVRGAVEAGLVGVY 116 (137)
T ss_dssp HHHHHTTCC-GGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred HHHHHcCCC-cccEEEEcCCHHHHHHHHHCCCEEEE
Confidence 333333322 25788999999999999999985443
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00015 Score=72.73 Aligned_cols=116 Identities=15% Similarity=0.154 Sum_probs=74.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.|++. +++.++|+.+.. .+.+|+...-..++.+++.. ....|.
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~~~~--------------------~~kp~~ 158 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAEDLG--------------------IGKPDP 158 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHHHHT--------------------CCTTSH
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEccccC--------------------CCCcCH
Confidence 4678999999999998 999999988754 34455543211111111000 011223
Q ss_pred HHHHHHHhhcC---CEEEEEcCCc-cCHHHHHhCCeeEEeC---CCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGT-NDAPALHEADIGLAMG---IAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~-ND~~ml~~A~vgIamg---~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+.+.+.+++| +.++++||+. ||+.|.+.||++.++- .+..+. +..+|+++.+ +..+.+++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-~~~~~~~~~~--l~el~~~l~ 227 (230)
T 3vay_A 159 APFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-DRLPDAEIHN--LSQLPEVLA 227 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-SSCCSEEESS--GGGHHHHHH
T ss_pred HHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-cCCCCeeECC--HHHHHHHHH
Confidence 34444333333 6789999997 9999999999998872 122233 6678999965 777777654
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00013 Score=75.49 Aligned_cols=42 Identities=17% Similarity=0.237 Sum_probs=37.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCccC
Q 003127 487 PMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILTD 529 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~lgi~~~ 529 (845)
++ ++++++|++++++|++++++| ||+........+++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 899999999999999999999 8899999999999998644
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.42 E-value=2.1e-05 Score=77.72 Aligned_cols=104 Identities=13% Similarity=0.077 Sum_probs=63.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~-lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.+.++.|+++|++++++|+.+......+.+. +|+...-..++.+.+.. .....|+--
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~----------------~~Kp~~~~~ 154 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLG----------------MRKPEARIY 154 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHT----------------CCTTCHHHH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEecccC----------------CCCCCHHHH
Confidence 4679999999999999999999999775443332222 23221101111111000 001122233
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCc
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGT 607 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~ 607 (845)
..+++.+... .+.++++||+.||+.|.+.||+..++.+.+.
T Consensus 155 ~~~~~~~~~~-~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 155 QHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp HHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHHHHcCCC-HHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 3444444433 3678899999999999999999988873433
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.34 E-value=7e-05 Score=75.44 Aligned_cols=106 Identities=11% Similarity=0.005 Sum_probs=69.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH------HcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAR------ECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~------~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
++.|++.+.++.|++. +++.++|+.+......+.+ .+|+...-..++.+.+.. ..+.
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~----------------~~KP 174 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMK----------------MAKP 174 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHT----------------CCTT
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccC----------------CCCC
Confidence 3669999999999999 9999999999988886663 345432111111111100 0111
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHH
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAK 611 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak 611 (845)
.|+--..+++.+.-. .+.++++||+.||+.|.+.||++.++. ++.+..+
T Consensus 175 ~~~~~~~~~~~~g~~-~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~~~~~k 223 (229)
T 4dcc_A 175 EPEIFKAVTEDAGID-PKETFFIDDSEINCKVAQELGISTYTP-KAGEDWS 223 (229)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEECSCHHHHHHHHHTTCEEECC-CTTCCGG
T ss_pred CHHHHHHHHHHcCCC-HHHeEEECCCHHHHHHHHHcCCEEEEE-CCHHHHH
Confidence 223333444444433 367899999999999999999999988 4444433
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00024 Score=77.05 Aligned_cols=136 Identities=15% Similarity=0.155 Sum_probs=84.5
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCc--eeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNG--IAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~--~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
-++.|++.+.++.|+++|+++.++|+.+...+....+.+|+...-. .++++++.... .+..+...-..+..|+
T Consensus 214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~~-----~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-----ENMYPQARPLGKPNPF 288 (384)
T ss_dssp SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-----HHHSTTSCCCCTTSTH
T ss_pred CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEeccccccc-----ccccccccCCCCCCHH
Confidence 3688999999999999999999999999999999999999875422 34443322100 0000000000111222
Q ss_pred cHHHHHHHHH--------------hhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCc------HHH-HhccCEEeccC
Q 003127 564 DKHTLVKHLR--------------TTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT------EVA-KESADVIILDD 621 (845)
Q Consensus 564 ~K~~~v~~l~--------------~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~------~~a-k~~ad~v~~~~ 621 (845)
-=..+.+.+. .. .+.++++||+.+|+.+-++||+... +. .+. +.. ...||+++.+
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~-p~e~l~VGDs~~Di~aAk~AG~~~I~V~-~g~~~~~~~~~l~~~~ad~vi~s- 365 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTL-TGLKGKDAAGELEAHHADYVINH- 365 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHHHHHHHTCEEEEES-CBTTBGGGHHHHHHTTCSEEESS-
T ss_pred HHHHHHHHcCCccccccccccccCCC-CcCeEEEcCCHHHHHHHHHcCCEEEEEC-CCccccccHHHHhhcCCCEEECC-
Confidence 2122222221 11 3678999999999999999998643 33 332 222 3468999865
Q ss_pred ChhHHHHHH
Q 003127 622 NFSTIVTVA 630 (845)
Q Consensus 622 ~~~~i~~~i 630 (845)
+..+...+
T Consensus 366 -l~eL~~~l 373 (384)
T 1qyi_A 366 -LGELRGVL 373 (384)
T ss_dssp -GGGHHHHH
T ss_pred -HHHHHHHH
Confidence 77776655
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00064 Score=69.48 Aligned_cols=116 Identities=13% Similarity=0.205 Sum_probs=80.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|++.|+++.+.|+.. .+....+.+|+...-..++.+++... ....|+-=.
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~~~~~----------------~KP~p~~~~ 177 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAGKCKN----------------NKPHPEIFL 177 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGGGCCS----------------CTTSSHHHH
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeecccccCC----------------CCCcHHHHH
Confidence 567899999999999999999988765 35667888998765444444433211 122344445
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeCCCCcHHHHhccCEEeccCChhHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILDDNFSTI 626 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~ak~~ad~v~~~~~~~~i 626 (845)
.+++.+.-. .+.++++||+.+|+.+-++||+ .|+++ +.. . .+.||+++.+ +..+
T Consensus 178 ~a~~~lg~~-p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~-~-~~~ad~vi~~--l~eL 232 (250)
T 4gib_A 178 MSAKGLNVN-PQNCIGIEDASAGIDAINSANMFSVGVG-NYE-N-LKKANLVVDS--TNQL 232 (250)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEES-CTT-T-TTTSSEEESS--GGGC
T ss_pred HHHHHhCCC-hHHeEEECCCHHHHHHHHHcCCEEEEEC-Chh-H-hccCCEEECC--hHhC
Confidence 566666544 4678999999999999999998 45555 332 2 3458999865 4443
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0013 Score=64.39 Aligned_cols=96 Identities=13% Similarity=0.144 Sum_probs=60.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|+++|+++.++||.....+..+.. .. ...++.+++.. ..+..|+--.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~---~~--~d~v~~~~~~~----------------~~KP~p~~~~ 94 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA---PV--NDWMIAAPRPT----------------AGWPQPDACW 94 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT---TT--TTTCEECCCCS----------------SCTTSTHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC---cc--CCEEEECCcCC----------------CCCCChHHHH
Confidence 578999999999999999999999999887755443 11 11222222110 0011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG 603 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg 603 (845)
..++.+.....+.++||||+.+|+.+-++||+ +|++.
T Consensus 95 ~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~ 132 (196)
T 2oda_A 95 MALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132 (196)
T ss_dssp HHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEES
T ss_pred HHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEc
Confidence 33333332212568899999999999999997 34444
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00046 Score=70.06 Aligned_cols=85 Identities=19% Similarity=0.235 Sum_probs=66.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~----~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
+.++.|++.+.++.|+++|+++.++|||+. ..+..-.+++|+..... -.++.+.
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------~~Lilr~ 156 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND----------------------KTLLLKK 156 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST----------------------TTEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc----------------------ceeEecC
Confidence 346789999999999999999999999975 47777888899974210 0034444
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHH
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 592 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~m 592 (845)
....|....+.+.+. | +.++++||..+|+++
T Consensus 157 ~~~~K~~~r~~L~~~-gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 157 DKSNKSVRFKQVEDM-GYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp SCSSSHHHHHHHHTT-TCEEEEEEESSGGGGCG
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHcCc
Confidence 456788888888875 4 579999999999987
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00051 Score=69.76 Aligned_cols=85 Identities=18% Similarity=0.137 Sum_probs=65.6
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~----~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
+.++.|++.+.++.|+++|+++.++|||+. ..+..-.+++|+..-.. -.++.|.
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------~~Lilr~ 156 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE----------------------SAFYLKK 156 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG----------------------GGEEEES
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc----------------------cceeccC
Confidence 456789999999999999999999999965 47777788899974210 0034444
Q ss_pred ChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHH
Q 003127 561 SPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPA 592 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~m 592 (845)
....|....+.+.+. | ..++++||..+|++.
T Consensus 157 ~~~~K~~~r~~l~~~-Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 157 DKSAKAARFAEIEKQ-GYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp SCSCCHHHHHHHHHT-TEEEEEEEESSGGGGCS
T ss_pred CCCChHHHHHHHHhc-CCCEEEEECCChHHhcc
Confidence 446788888888876 5 579999999999886
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0046 Score=63.06 Aligned_cols=45 Identities=20% Similarity=0.298 Sum_probs=34.4
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCccC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILTD 529 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~lgi~~~ 529 (845)
.++.-+++.++++.+++.|++++++| |+.........+++|+..+
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~ 68 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEIS 68 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCcc
Confidence 45566889999999999999999999 6677677777777777543
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0011 Score=70.06 Aligned_cols=43 Identities=16% Similarity=0.089 Sum_probs=37.2
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGIL 527 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~lgi~ 527 (845)
.+++-+++.+++++|+++|++++++| |++........+++|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 68888887778888885
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0013 Score=65.64 Aligned_cols=95 Identities=11% Similarity=0.032 Sum_probs=62.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+.+. .+....+.+|+...-..++.+++. -..+..|+--.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~~~----------------~~~Kp~~~~~~ 157 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSYEI----------------KAVKPNPKIFG 157 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC---------------------------CCHHH
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEecccc----------------CCCCCCHHHHH
Confidence 4679999999999999999999999876 478888899986432223222211 01122233233
Q ss_pred HHHHHHHhhcCCEEEEEcCCcc-CHHHHHhCCeeEEe
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTN-DAPALHEADIGLAM 602 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~N-D~~ml~~A~vgIam 602 (845)
.+++.+.. .. +++||+.+ |+.+-+.||+....
T Consensus 158 ~~~~~~~~---~~-~~vgD~~~~Di~~a~~aG~~~i~ 190 (220)
T 2zg6_A 158 FALAKVGY---PA-VHVGDIYELDYIGAKRSYVDPIL 190 (220)
T ss_dssp HHHHHHCS---SE-EEEESSCCCCCCCSSSCSEEEEE
T ss_pred HHHHHcCC---Ce-EEEcCCchHhHHHHHHCCCeEEE
Confidence 34444332 23 89999999 99999999998664
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0017 Score=68.34 Aligned_cols=98 Identities=15% Similarity=0.112 Sum_probs=69.1
Q ss_pred ecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHH--------cCCccCCceeeeCcccccCCHHHHhhhcC
Q 003127 484 IKDPMRPGVKESVAICRSAGITVRMVTGDNINT---AKAIARE--------CGILTDNGIAIEGPEFREKSDEELSKLIP 552 (845)
Q Consensus 484 ~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---a~~ia~~--------lgi~~~~~~~i~g~~~~~~~~~~~~~~~~ 552 (845)
.+.++.|++.++++.|+++|+++.++||++... +....+. .|+. ...++.+++..
T Consensus 185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~------------ 250 (301)
T 1ltq_A 185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LVMQCQREQGD------------ 250 (301)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CSEEEECCTTC------------
T ss_pred cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--chheeeccCCC------------
Confidence 356789999999999999999999999998543 2444455 6873 22333222211
Q ss_pred CeeEEEEeChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCeeEE
Q 003127 553 KIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 553 ~~~v~~~~~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
.+..|+-|..+.+.+... . +.++++||..+|+.|-++||+-..
T Consensus 251 -----~kp~p~~~~~~~~~~~~~-~~~~~~~vgD~~~di~~a~~aG~~~~ 294 (301)
T 1ltq_A 251 -----TRKDDVVKEEIFWKHIAP-HFDVKLAIDDRTQVVEMWRRIGVECW 294 (301)
T ss_dssp -----CSCHHHHHHHHHHHHTTT-TCEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred -----CcHHHHHHHHHHHHHhcc-ccceEEEeCCcHHHHHHHHHcCCeEE
Confidence 123466777787777544 3 346789999999999999998643
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0036 Score=62.87 Aligned_cols=115 Identities=11% Similarity=0.170 Sum_probs=74.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++| ++.++|+.+...+....+.+|+... +... +... ..|.
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~---------------------f~~~-~~~~---~~K~ 149 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDE---------------------VEGR-VLIY---IHKE 149 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHH---------------------TTTC-EEEE---SSGG
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHh---------------------cCee-EEec---CChH
Confidence 57899999999999999 9999999999999999999987531 0000 1111 1232
Q ss_pred HHHHHHHhh-cCCEEEEEcCCcc---CHHHHHhCCeeE-EeCCCC----c-HHHHhc--cCEEeccCChhHHHHHH
Q 003127 567 TLVKHLRTT-LGEVVAVTGDGTN---DAPALHEADIGL-AMGIAG----T-EVAKES--ADVIILDDNFSTIVTVA 630 (845)
Q Consensus 567 ~~v~~l~~~-~g~~v~~~GDg~N---D~~ml~~A~vgI-amg~~~----~-~~ak~~--ad~v~~~~~~~~i~~~i 630 (845)
...+.+.+. ..+.++++||+.| |+.+-+.||+.. .+. .+ . +..++. +|+++.+ +..+.+.+
T Consensus 150 ~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~~~~~~i~~--~~el~~~l 222 (231)
T 2p11_A 150 LMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHPPADVTVER--IGDLVEMD 222 (231)
T ss_dssp GCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSCCCSEEESS--GGGGGGCG
T ss_pred HHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccCCCceeecC--HHHHHHHH
Confidence 333333322 1478999999999 666667788653 333 32 2 233443 8998854 55554433
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0049 Score=59.33 Aligned_cols=32 Identities=16% Similarity=0.273 Sum_probs=23.5
Q ss_pred HHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCC
Q 003127 440 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDP 487 (845)
Q Consensus 440 ~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~ 487 (845)
.+.+.++..+|..++.+| .|..++|++++.|+
T Consensus 154 ~~~~~~~~~~G~T~V~va----------------idg~l~g~iavaD~ 185 (185)
T 2kmv_A 154 NDFMTEHERKGRTAVLVA----------------VDDELCGLIAIADT 185 (185)
T ss_dssp HHHHHHHHHTTCEEEEEE----------------ETTEEEEEEEEECC
T ss_pred HHHHHHHHhCCCeEEEEE----------------ECCEEEEEEEEEcC
Confidence 345567777887777666 35579999999985
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0018 Score=62.24 Aligned_cols=98 Identities=17% Similarity=0.119 Sum_probs=62.9
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCceeeeC----cccccCCHHH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGD---------------NINTAKAIARECGILTDNGIAIEG----PEFREKSDEE 546 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd---------------~~~ta~~ia~~lgi~~~~~~~i~g----~~~~~~~~~~ 546 (845)
-++.|++.+++++|+++|++++++|+. ....+..+.+.+|+. -+..+.++ ++...
T Consensus 41 ~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-fd~v~~s~~~~~~~~~~----- 114 (176)
T 2fpr_A 41 LAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ-FDEVLICPHLPADECDC----- 114 (176)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC-EEEEEEECCCGGGCCSS-----
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC-eeEEEEcCCCCcccccc-----
Confidence 357899999999999999999999998 466788888899985 11111221 11000
Q ss_pred HhhhcCCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 547 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 547 ~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
....|+-=..+++.+.-. .+.++++||+.+|+.+-+.||+...
T Consensus 115 -----------~KP~p~~~~~~~~~~gi~-~~~~l~VGD~~~Di~~A~~aG~~~i 157 (176)
T 2fpr_A 115 -----------RKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGINGL 157 (176)
T ss_dssp -----------STTSCGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEEE
T ss_pred -----------cCCCHHHHHHHHHHcCCC-HHHEEEEcCCHHHHHHHHHcCCeEE
Confidence 000111111223333323 3578899999999999999998643
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.25 E-value=0.004 Score=65.87 Aligned_cols=117 Identities=15% Similarity=0.193 Sum_probs=73.5
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc----CCccCCceeeeCcc-ccc------CC-HHHHhh---
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC----GILTDNGIAIEGPE-FRE------KS-DEELSK--- 549 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l----gi~~~~~~~i~g~~-~~~------~~-~~~~~~--- 549 (845)
...+.++..+.++.++++|++|+++||-+...++.+|..+ ||..++ |+.-.. ... .. ..+..+
T Consensus 141 ~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e~--ViG~~~~~~~~~~~~~~~~~~~~~dg~y 218 (327)
T 4as2_A 141 PPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPEN--VIGVTTLLKNRKTGELTTARKQIAEGKY 218 (327)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGGG--EEEECEEEECTTTCCEECHHHHHHTTCC
T ss_pred ccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHHH--eEeeeeeeeccccccccccccccccccc
Confidence 3467899999999999999999999999999999999985 555433 221110 000 00 001100
Q ss_pred ---hcCCeeEEEE-----eChhcHHHHHHHHHhhcCCEEEEEcCC-ccCHHHHHh--CCeeEEeC
Q 003127 550 ---LIPKIQVMAR-----SSPMDKHTLVKHLRTTLGEVVAVTGDG-TNDAPALHE--ADIGLAMG 603 (845)
Q Consensus 550 ---~~~~~~v~~~-----~~p~~K~~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~--A~vgIamg 603 (845)
...+.....+ +.-+.|...++...+.....+++.||+ ..|.+||+. ++.|+++-
T Consensus 219 ~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~ 283 (327)
T 4as2_A 219 DPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLW 283 (327)
T ss_dssp CGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEE
T ss_pred cccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEE
Confidence 0111112222 223678888887764423578899999 579999965 44555443
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0035 Score=64.16 Aligned_cols=84 Identities=15% Similarity=0.269 Sum_probs=55.7
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCc--cCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGIL--TDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~---~~ta~~ia~~lgi~--~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
.++.|++.++++.|+++|+++.++||++ ...+....+.+|+. .....++.+++. .
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~~--------------------~ 159 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPKE--------------------K 159 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTTC--------------------C
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCCC--------------------C
Confidence 3577999999999999999999999998 44556666788987 333333333210 0
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHH
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPAL 593 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml 593 (845)
.|.. ...+.+.--..++++||+.+|+.+-
T Consensus 160 K~~~----~~~~~~~~~~~~l~VGDs~~Di~aA 188 (258)
T 2i33_A 160 GKEK----RRELVSQTHDIVLFFGDNLSDFTGF 188 (258)
T ss_dssp SSHH----HHHHHHHHEEEEEEEESSGGGSTTC
T ss_pred CcHH----HHHHHHhCCCceEEeCCCHHHhccc
Confidence 1211 1222222024688999999998875
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=96.05 E-value=0.01 Score=60.89 Aligned_cols=116 Identities=16% Similarity=0.181 Sum_probs=75.0
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc---CCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC---GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l---gi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
-++.|++.++++.|+++|+++.++|..+...+..+.+.+ |+...-..++.+ + +..+.+|
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~-~-----------------~~~KP~p 190 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT-K-----------------IGHKVES 190 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG-G-----------------GCCTTCH
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec-C-----------------CCCCCCH
Confidence 368899999999999999999999999988888777754 454322222221 1 1011223
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE-eCCCCc---HHHHhccCEEecc
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA-MGIAGT---EVAKESADVIILD 620 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa-mg~~~~---~~ak~~ad~v~~~ 620 (845)
+-=..+++.+.-. .+.++++||+.+|+.+-++||+-.. +...+. +.....+|+++.+
T Consensus 191 ~~~~~~~~~lg~~-p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~ 251 (261)
T 1yns_A 191 ESYRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 251 (261)
T ss_dssp HHHHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred HHHHHHHHHhCcC-cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECC
Confidence 3334455555443 4679999999999999999998543 321121 1223457777754
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.66 E-value=0.012 Score=59.50 Aligned_cols=110 Identities=15% Similarity=0.209 Sum_probs=74.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|+++|+++.++|+... +..+.+.+|+......++.+++... .+..|+-=.
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~~~~~----------------~KP~p~~~~ 156 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADASQLKN----------------SKPDPEIFL 156 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGGGCSS----------------CTTSTHHHH
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccccccC----------------CCCcHHHHH
Confidence 4678999999999999999999998754 4567788898765444444433211 122333334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCCcHHHHhccCEEecc
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~~~~ak~~ad~v~~~ 620 (845)
.+.+.+.-. .+.+++|||+.+|+.+-++||+- |+++ +|. ..||.++.+
T Consensus 157 ~a~~~lg~~-p~e~l~VgDs~~di~aA~~aG~~~I~V~-~g~----~~ad~~~~~ 205 (243)
T 4g9b_A 157 AACAGLGVP-PQACIGIEDAQAGIDAINASGMRSVGIG-AGL----TGAQLLLPS 205 (243)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHHTCEEEEES-TTC----CSCSEEESS
T ss_pred HHHHHcCCC-hHHEEEEcCCHHHHHHHHHcCCEEEEEC-CCC----CcHHHhcCC
Confidence 555555544 47889999999999999999974 3444 432 335666543
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.016 Score=59.40 Aligned_cols=44 Identities=16% Similarity=0.188 Sum_probs=34.6
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCcc
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILT 528 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----lgi~~ 528 (845)
.++.-+++.++++.+++.|+++.++||+...+...+++. +|+..
T Consensus 19 ~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 19 GKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 344447899999999999999999999987666666554 77753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=93.91 E-value=0.032 Score=63.39 Aligned_cols=98 Identities=12% Similarity=0.141 Sum_probs=61.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCC------CHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGD------NINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd------~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
++.+++.++++.|+++|+++.++|+. .......... |+...-..++.+++.. ..+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~--~l~~~fd~i~~~~~~~----------------~~KP 161 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMC--ELKMHFDFLIESCQVG----------------MVKP 161 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHH--HHHTTSSEEEEHHHHT----------------CCTT
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhh--hhhhheeEEEeccccC----------------CCCC
Confidence 57899999999999999999999996 3222222211 3322222233322211 0112
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeC
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMG 603 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg 603 (845)
.|+--..+.+.+.-. .+.++++||+.||+.+.+.||+....-
T Consensus 162 ~p~~~~~~~~~lg~~-p~~~~~v~D~~~di~~a~~aG~~~~~~ 203 (555)
T 3i28_A 162 EPQIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILV 203 (555)
T ss_dssp CHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred CHHHHHHHHHHcCCC-hhHEEEECCcHHHHHHHHHcCCEEEEE
Confidence 233334455555443 467888899999999999999987764
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=93.89 E-value=0.063 Score=48.97 Aligned_cols=41 Identities=12% Similarity=0.097 Sum_probs=35.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCC---HHHHHHHHHHcCCcc
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDN---INTAKAIARECGILT 528 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~---~~ta~~ia~~lgi~~ 528 (845)
+.+++.++|++++++|++++++|||+ ...+...+++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 45789999999999999999999998 567777788888854
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=93.73 E-value=0.012 Score=58.30 Aligned_cols=88 Identities=14% Similarity=0.165 Sum_probs=54.6
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCccCCceeeeCcccccCCHHHHhhhcCCeeEEE--EeC
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE----CGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMA--RSS 561 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~----lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~--~~~ 561 (845)
+.+++.+.++.|+++|+++.++|+++...+..+.+. .+... .+... ..+. ...
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~------~~~~~---------------~~~~~~KP~ 147 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA------TNMNP---------------VIFAGDKPG 147 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT------TTBCC---------------CEECCCCTT
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc------cccch---------------hhhcCCCCC
Confidence 467899999999999999999999975433333322 22210 00000 0111 122
Q ss_pred hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
|+-...+++ +. |- ++++||+.+|+.+-+.||+...
T Consensus 148 p~~~~~~~~---~~-g~-~l~VGDs~~Di~aA~~aG~~~i 182 (211)
T 2b82_A 148 QNTKSQWLQ---DK-NI-RIFYGDSDNDITAARDVGARGI 182 (211)
T ss_dssp CCCSHHHHH---HT-TE-EEEEESSHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHH---HC-CC-EEEEECCHHHHHHHHHCCCeEE
Confidence 333333333 22 43 8999999999999999998643
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=91.73 E-value=0.17 Score=55.59 Aligned_cols=40 Identities=13% Similarity=0.260 Sum_probs=34.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCC------------HHHHHHHHHHcCCc
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDN------------INTAKAIARECGIL 527 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~------------~~ta~~ia~~lgi~ 527 (845)
+-|++.++++.|+++|++++++|+.+ ...+..+.+.+|+.
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~ 139 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP 139 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC
Confidence 67999999999999999999999965 22377788888974
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=90.78 E-value=0.58 Score=43.84 Aligned_cols=16 Identities=13% Similarity=0.067 Sum_probs=14.0
Q ss_pred cCCchHHHHHHHHHHc
Q 003127 351 LGTPTETAILEFGLLL 366 (845)
Q Consensus 351 ~~~p~e~al~~~~~~~ 366 (845)
+.||..+|+++++++.
T Consensus 36 SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 36 SEHPLGVAVTKYCKEE 51 (165)
T ss_dssp SCSTTHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHh
Confidence 6799999999998754
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=90.64 E-value=0.79 Score=43.34 Aligned_cols=101 Identities=10% Similarity=0.047 Sum_probs=61.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCC---CHHH---HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEe
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGD---NINT---AKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARS 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd---~~~t---a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~ 560 (845)
++.|++.+.++.|++. +++.++|+. +... ...+.+..+.......++++++
T Consensus 69 ~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~---------------------- 125 (180)
T 3bwv_A 69 DVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRK---------------------- 125 (180)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCG----------------------
T ss_pred CCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCc----------------------
Confidence 5789999999999984 999999998 3211 2223333454332222332221
Q ss_pred ChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 561 SPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 561 ~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
. .. +.++++||+.+|+. ++||-.|++. .+... ...+++++.+ +..+..++
T Consensus 126 ---~----------~l-~~~l~ieDs~~~i~--~aaG~~i~~~-~~~~~-~~~~~~~i~~--~~el~~~l 175 (180)
T 3bwv_A 126 ---N----------II-LADYLIDDNPKQLE--IFEGKSIMFT-ASHNV-YEHRFERVSG--WRDVKNYF 175 (180)
T ss_dssp ---G----------GB-CCSEEEESCHHHHH--HCSSEEEEEC-CGGGT-TCCSSEEECS--HHHHHHHH
T ss_pred ---C----------ee-cccEEecCCcchHH--HhCCCeEEeC-CCccc-CCCCceecCC--HHHHHHHH
Confidence 1 11 34678999999985 6788666665 33221 2456777744 76666554
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=90.55 E-value=0.0044 Score=60.35 Aligned_cols=40 Identities=13% Similarity=0.125 Sum_probs=35.7
Q ss_pred CCChhHHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcCC
Q 003127 487 PMRPGVKESVAICRSA-GITVRMVTGDNINTAKAIARECGI 526 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~-Gi~v~~~TGd~~~ta~~ia~~lgi 526 (845)
++.|++.+.+++|+++ |+++.++|+.+...+....+.+|+
T Consensus 73 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 73 EPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred ccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 5789999999999999 999999999998877777777776
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=89.16 E-value=0.53 Score=47.63 Aligned_cols=93 Identities=9% Similarity=0.053 Sum_probs=60.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc--C---------CccCCceeeeCcccccCCHHHHhhhcCCee
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC--G---------ILTDNGIAIEGPEFREKSDEELSKLIPKIQ 555 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l--g---------i~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 555 (845)
++.|++.+.+++ |+++.++|..+...+....+.+ | +...-..+++ . ...
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~--------~-~~~------- 184 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFD--------I-NTS------- 184 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEEC--------H-HHH-------
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEe--------e-ecc-------
Confidence 577899888887 9999999999999888887766 4 2110000000 0 000
Q ss_pred EEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 556 VMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 556 v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
-.+..|+-=..+.+.+.-. .+.++++||+.+|+.+-++||+-..
T Consensus 185 -g~KP~p~~~~~a~~~lg~~-p~~~l~vgDs~~di~aA~~aG~~~i 228 (253)
T 2g80_A 185 -GKKTETQSYANILRDIGAK-ASEVLFLSDNPLELDAAAGVGIATG 228 (253)
T ss_dssp -CCTTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEE
T ss_pred -CCCCCHHHHHHHHHHcCCC-cccEEEEcCCHHHHHHHHHcCCEEE
Confidence 0122333334455555444 4678999999999999999998654
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=87.20 E-value=0.38 Score=51.25 Aligned_cols=55 Identities=11% Similarity=0.097 Sum_probs=41.3
Q ss_pred EEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCccCCceee
Q 003127 480 GIVGIKDPMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGILTDNGIAI 534 (845)
Q Consensus 480 G~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~----~~ta~~ia~~lgi~~~~~~~i 534 (845)
|++.-.+.+-|++.++++.|+++|++++++|+.+ ...+..+.+.+|+......++
T Consensus 22 Gvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ 80 (352)
T 3kc2_A 22 GVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQII 80 (352)
T ss_dssp TTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEE
T ss_pred CeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEe
Confidence 5555566677999999999999999999999775 345566666789875443444
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.37 E-value=0.3 Score=47.25 Aligned_cols=92 Identities=13% Similarity=0.017 Sum_probs=64.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
.+||++.+.+++|++. +++++.|.-....|..+.+.+++...-..++.+++.. ..|.
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~----------------------~~k~ 124 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCV----------------------FHRG 124 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCE----------------------EETT
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEcccce----------------------ecCC
Confidence 5799999999999998 9999999999999999999999864212222222111 0122
Q ss_pred HHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCeeEE
Q 003127 567 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGLA 601 (845)
Q Consensus 567 ~~v~~l~~~--~g~~v~~~GDg~ND~~ml~~A~vgIa 601 (845)
..++.+..- -.+.+++++|..+++.+-+.|++-|.
T Consensus 125 ~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i~ 161 (195)
T 2hhl_A 125 NYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPVQ 161 (195)
T ss_dssp EEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEECC
T ss_pred ceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEEe
Confidence 222222221 02578899999999988887877663
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=85.05 E-value=0.36 Score=46.10 Aligned_cols=91 Identities=12% Similarity=0.018 Sum_probs=63.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
.+||++.+.++++++. +++++.|.-....|..+.+.++....-...+.+++.. ..|.
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~----------------------~~k~ 111 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCV----------------------FHRG 111 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSE----------------------EETT
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCce----------------------ecCC
Confidence 5799999999999998 9999999999999999999999864211222221110 0111
Q ss_pred HHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 567 TLVKHLRTT--LGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 567 ~~v~~l~~~--~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
..++.+..- -.+.++++||..+|..+=..+++-|
T Consensus 112 ~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 112 NYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred cEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 122222222 0257889999999998877777765
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=84.46 E-value=1.3 Score=39.28 Aligned_cols=29 Identities=21% Similarity=0.230 Sum_probs=26.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNIN 515 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ 515 (845)
++.+++.+++++++++|++++++|||+..
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 56789999999999999999999999864
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=81.73 E-value=3.2 Score=41.85 Aligned_cols=119 Identities=15% Similarity=0.145 Sum_probs=62.9
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeC-cccccCCHHHHhhhcCCeeEEEEeCh--
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFREKSDEELSKLIPKIQVMARSSP-- 562 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g-~~~~~~~~~~~~~~~~~~~v~~~~~p-- 562 (845)
..+.+++.++++.|+ +|+++ ++|..+..... .. ..+.+ ..+ ...+......-.+ ..-.|
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~----------~~-~~l~~~~~l----~~~~~~~~~~~~~-~~~KP~~ 190 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPG----------EE-GIYPGAGSI----IAALKVATNVEPI-IIGKPNE 190 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEE----------TT-EEEECHHHH----HHHHHHHHCCCCE-ECSTTSH
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccC----------CC-CCcCCcHHH----HHHHHHHhCCCcc-EecCCCH
Confidence 356789999999999 89998 77876532110 00 00111 000 0011111111111 11223
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCee-EEeCCCCc---HHHHh---ccCEEeccCChhHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIG-LAMGIAGT---EVAKE---SADVIILDDNFSTIVT 628 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vg-Iamg~~~~---~~ak~---~ad~v~~~~~~~~i~~ 628 (845)
+-=..+.+. -. .+.++|+||+. +|+.+-+.||+. |.+. .|. +...+ .+|+++.+ +..+.+
T Consensus 191 ~~~~~~~~~--~~-~~~~~~VGD~~~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~~~~p~~~~~~--l~el~~ 258 (263)
T 1zjj_A 191 PMYEVVREM--FP-GEELWMVGDRLDTDIAFAKKFGMKAIMVL-TGVSSLEDIKKSEYKPDLVLPS--VYELID 258 (263)
T ss_dssp HHHHHHHHH--ST-TCEEEEEESCTTTHHHHHHHTTCEEEEES-SSSCCHHHHTTCSSCCSEEESS--GGGGGG
T ss_pred HHHHHHHHh--CC-cccEEEECCChHHHHHHHHHcCCeEEEEC-CCCCChHHHHhcCCCCCEEECC--HHHHHH
Confidence 222223333 22 57899999995 999999999985 4443 332 23332 58898865 555544
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 845 | ||||
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 3e-37 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 3e-37 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 1e-18 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 7e-37 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-32 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 5e-24 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 5e-19 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 1e-18 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 3e-12 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 6e-11 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 1e-07 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 2e-06 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 3e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 2e-04 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 5e-04 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 5e-04 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 6e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.001 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 0.001 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 0.002 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 0.002 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 135 bits (340), Expect = 3e-37
Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 477 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN----GI 532
T DP R V S+ +CR AGI V M+TGDN TA AI R GI +N
Sbjct: 10 TGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADR 69
Query: 533 AIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPA 592
A G EF + E + + AR P K +V++L++ A+TGDG NDAPA
Sbjct: 70 AYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEI-TAMTGDGVNDAPA 128
Query: 593 LHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 633
L +A+IG+AMG +GT VAK ++++++ DDNFSTIV + G
Sbjct: 129 LKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 144 bits (363), Expect = 3e-37
Identities = 57/280 (20%), Positives = 114/280 (40%), Gaps = 35/280 (12%)
Query: 591 PALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFVQFQLTV 650
P A I + + +AK++A V ++ +V GR++Y N+++F+++ ++
Sbjct: 193 PEGLPAVITTCLALGTRRMAKKNAIV-------RSLPSVETLGRAIYNNMKQFIRYLISS 245
Query: 651 NVVALIVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGN 710
NV ++ F +A L L VQLLWVN++ D L A AL PP+ D+M R P K
Sbjct: 246 NVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEP 305
Query: 711 FISNVMWRNILGQSLYQ----------------------FLIIWYLQTRGKAVFRLDGPD 748
IS ++ + Y + + + + +G D
Sbjct: 306 LISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLD 365
Query: 749 PDLIL----NTLIFNTFVFCQVFNEISSREMEKINVFKGILKNYVFVAVLTCTVLFQIII 804
++ T+ + V ++ N ++S + + N + + ++ +I
Sbjct: 366 CEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLI 425
Query: 805 IEL--LGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLI 842
+ + L L+L QW + + + + + +LK I
Sbjct: 426 LYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFI 465
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 87.8 bits (217), Expect = 1e-18
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 169 DETPLQVKLNGVATIIGKIGLFFAVVTFAVMVQGLFTRKLQEGTHWTWSGDDALEILEFF 228
D+TPLQ KL+ + K+ V + + + G F + G + +F
Sbjct: 130 DKTPLQQKLDEFGEQLSKVISLICVAVWLINI-GHFNDPVH-------GGSWIRGAIYYF 181
Query: 229 AIAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDK--TG 286
IAV + V A+PEGLP +T LA ++M A+VR L + ET+G A +
Sbjct: 182 KIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRY 241
Query: 287 TLTTNHMTVLKACIC 301
+++N V+ +
Sbjct: 242 LISSNVGEVVCIFLT 256
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 140 bits (354), Expect = 7e-37
Identities = 42/390 (10%), Positives = 95/390 (24%), Gaps = 59/390 (15%)
Query: 260 NDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVLKACICEEIKEVDNSKGTPAFGSS 319
+ + L +G + I + + + ++I S G +
Sbjct: 22 SALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRN-RIFQKDKILNKLKSLGLNSNWDM 80
Query: 320 IPASASKLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQAERQASKI 379
+ S L+ + + L A + + Q
Sbjct: 81 LFIVFSIHLI----------------DILKKLSHDEIEAFMYQDEPVELKLQNISTNLAD 124
Query: 380 VKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHL 439
+ + V + + A+ + +++A + L
Sbjct: 125 CFNLNEQLPLQFLDNVKVGKNNIYAALEEFAT---------------TELHVSDATLFSL 169
Query: 440 NETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPM--RPGVKESVA 497
+ A E + L + G + + + VK +
Sbjct: 170 KGALWTLAQEVYQEWYLGSKLYEDVE----KKIARTTFKTGYIYQEIILRPVDEVKVLLN 225
Query: 498 ICRSAGITVRMVTGDNINTAKAIARECGILT--DNGIAIEGPEFREKSDEELSKL----- 550
+ AG + + TG G+L + + E +
Sbjct: 226 DLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 551 ----IPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEAD---IGLAMG 603
+ + + + V + GD D + + IG G
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQKIGATFIGTLTG 344
Query: 604 IAGTEVAKE----SADVIILDDNFSTIVTV 629
+ G + A E AD +I ++ + V
Sbjct: 345 LKGKDAAGELEAHHADYVI--NHLGELRGV 372
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 123 bits (309), Expect = 1e-32
Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 15/212 (7%)
Query: 293 MTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KT 348
MTV +I E D ++ + L + G+ N K
Sbjct: 2 MTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKR 61
Query: 349 EILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVH 406
+ G +E+A+L+ L G + R + V FNS K + E +
Sbjct: 62 DTAGDASESALLKCIELSCGSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121
Query: 407 CKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEI----- 461
KGA E IL C L G+ +PL++ + + R L + +
Sbjct: 122 MKGAPERILDRCSSIL-VQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKF 180
Query: 462 --GNEFSADAP-IPTEGYTCIGIVGIKDPMRP 490
G +F D PTE +G++ + D
Sbjct: 181 PRGFKFDTDELNFPTEKLCFVGLMSMIDHHHH 212
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 96.3 bits (239), Expect = 5e-24
Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 30/155 (19%)
Query: 477 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG 536
T G D ++ K +V + GI V M+TGDN +A+AI+RE
Sbjct: 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL------------ 58
Query: 537 PEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEA 596
V+A P K VK L+ EVVA GDG NDAPAL +A
Sbjct: 59 ---------------NLDLVIAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQA 101
Query: 597 DIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631
D+G+A+G +G++VA ES D++++ D+ +V +
Sbjct: 102 DLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.9 bits (209), Expect = 5e-19
Identities = 32/189 (16%), Positives = 57/189 (30%), Gaps = 31/189 (16%)
Query: 326 KLLLQSIFNNTGGEVVIGEGNKTEILGTPTETAILEFGLLLGGDFQA------------- 372
+L N E +G TETA+ +
Sbjct: 52 ELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANAC 111
Query: 373 ---ERQASKIVKVEPFNSVKKQMGVVIELPEGG-----FRVHCKGASEIILAACDKFLNS 424
RQ K F+ +K M V + ++ KGA E ++ C+
Sbjct: 112 NSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV- 170
Query: 425 NGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLACMEIGNEFSADAPIPTEGY------ 476
VP+ + I+++ + LR L LA + + + +
Sbjct: 171 GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFMEYETD 230
Query: 477 -TCIGIVGI 484
T +G+VG+
Sbjct: 231 LTFVGVVGM 239
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 83.5 bits (205), Expect = 1e-18
Identities = 27/210 (12%), Positives = 59/210 (28%), Gaps = 11/210 (5%)
Query: 439 LNETIEKFASEALRTLCLACM--EIGNEFSADAPIPTEGYTC----IGIVGIKDPMRPGV 492
+ ++ FA L + + + + V +R G
Sbjct: 21 IINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEEITSFVLEDAKIREGF 80
Query: 493 KESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIP 552
+E VA I +++G + I F + +
Sbjct: 81 REFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR--IYCNHASF-DNDYIHIDWPHS 137
Query: 553 KIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKE 612
+ K +++ L + + + GD D A +D+ A E ++
Sbjct: 138 CKGTCSNQCGCCKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQ 196
Query: 613 SADVIILDDNFSTIVTVAKWGRSVYINIQK 642
+ + + D F I + + V +Q
Sbjct: 197 NLNHLPYQD-FYEIRKEIENVKEVQEWLQN 225
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 61.6 bits (149), Expect = 3e-12
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 16/114 (14%)
Query: 66 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESE 121
+V R + ++I D++PGDIV + +GD+VPAD +S ++ +++S LTGES
Sbjct: 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESV 61
Query: 122 PVNVNA------------LNPFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 163
V + L SGT + G +V T G+ T+ GK+ +
Sbjct: 62 SVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 60.7 bits (146), Expect = 6e-11
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 8/142 (5%)
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
I + PG++E V+ + + V +++G + + +A + I N A
Sbjct: 76 IAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKF-- 133
Query: 541 EKSDEELSKLIPKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIG 599
+ + + K ++K L+ + + + GDG D A AD
Sbjct: 134 ----YFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAF 189
Query: 600 LAMG-IAGTEVAKESADVIILD 620
+ G + K++A I D
Sbjct: 190 IGFGGNVIRQQVKDNAKWYITD 211
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 51.0 bits (120), Expect = 1e-07
Identities = 28/145 (19%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEE 546
G +E++ ++ G V +V+G I + G+ + + + D
Sbjct: 75 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGD-- 132
Query: 547 LSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAG 606
+ + + + K L + VAV GDG ND +A + +A
Sbjct: 133 ----VEGEVLKENAKGEILEKIAKIEGINLEDTVAV-GDGANDISMFKKAGLKIAFC--A 185
Query: 607 TEVAKESADVIILDDNFSTIVTVAK 631
+ KE AD+ I + I+ K
Sbjct: 186 KPILKEKADICIEKRDLREILKYIK 210
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.3 bits (111), Expect = 2e-06
Identities = 32/226 (14%), Positives = 55/226 (24%), Gaps = 11/226 (4%)
Query: 413 IILAACDK---FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADA 469
I + D N + A+ T+ A
Sbjct: 2 IKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVTGNTVQFA-EAASILIGTSG 60
Query: 470 PIPTEGYTCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD 529
P+ E I + + +E + I R T I+ +
Sbjct: 61 PVVAEDGGAISYKKKRIFLASMDEEWILWNE---IRKRFPNARTSYTMPDRRAGLVIMRE 117
Query: 530 NGIAIEGPEFREKSDEELSKLIPK--IQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDG 586
E + + L + I V + + VA GDG
Sbjct: 118 TINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177
Query: 587 TNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632
ND A +A+ A ++ KE+AD + +
Sbjct: 178 ENDLDAFKVVGYKVAVAQA-PKILKENADYVTKKEYGEGGAEAIYH 222
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 46.8 bits (110), Expect = 3e-06
Identities = 16/77 (20%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Query: 545 EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI 604
+L V + D +L V GD ND L EA G+
Sbjct: 113 HKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH- 171
Query: 605 AGTEVAKESADVIILDD 621
A V +E +
Sbjct: 172 APENVIREFPQFPAVHT 188
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 41.8 bits (97), Expect = 2e-04
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 578 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
E AV GD ND L A G+AMG A E K AD + L ++
Sbjct: 231 ETAAV-GDSLNDKSMLEAAGKGVAMGNA-REDIKSIADAVTLTND 273
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 40.4 bits (93), Expect = 5e-04
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 568 LVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 617
L + R E AV GD ND P D +G + A+ + +I
Sbjct: 188 LDFYKRLGQIESYAV-GDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSSII 236
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 40.4 bits (93), Expect = 5e-04
Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 578 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
+ V V GD ND L A+ A T+ AK A ++ +
Sbjct: 224 DQVLVVGDAENDIAMLSNFKYSFAVANA-TDSAKSHAKCVLPVSH 267
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 40.0 bits (92), Expect = 6e-04
Identities = 30/221 (13%), Positives = 57/221 (25%), Gaps = 68/221 (30%)
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARE-----------CGILTD 529
+ + ES+ G+TV +++G+ I A+ GI+ D
Sbjct: 14 LTDRDRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFD 73
Query: 530 NGIAIE----------------------------------GPEFREKSDEELSKLIPKIQ 555
N +I+ G + + + + K
Sbjct: 74 NDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRG 133
Query: 556 VMARSSPMDKHTLVKHLRTTLG------------EVVAVTGDGTNDAPALHEADIGLAMG 603
+ S H + + + + V GD ND P
Sbjct: 134 FVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPA 193
Query: 604 IAGTEVAKESADVIILDDNFSTIVTVAKWGRSVYINIQKFV 644
A T+ K +D V+ +G + + F
Sbjct: 194 NA-TDNIKAVSD----------FVSDYSYGEEIGQIFKHFE 223
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 39.2 bits (90), Expect = 0.001
Identities = 37/240 (15%), Positives = 67/240 (27%), Gaps = 40/240 (16%)
Query: 421 FLNSNGEVVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIG 480
LN N E+ + + L+ + R L F P +
Sbjct: 13 LLNDNLEISEKDRRNIEKLSRKCYVVFASG-RMLVSTLNVEKKYFKRTFPTIAYNGAIVY 71
Query: 481 IVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR 540
+ + + VA I V + + + ++R
Sbjct: 72 LPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYR 131
Query: 541 EKSD-EELSKLIPKIQVMARSSPMDKHTLVKHLRTTLGEVVAVT---------------- 583
+ + EL + +++ +P L + L +VV V
Sbjct: 132 VEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVDK 191
Query: 584 ---------------------GDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
GD ND EA + +AM A E KE++D++ L +N
Sbjct: 192 GKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA-IEKVKEASDIVTLTNN 250
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 39.2 bits (90), Expect = 0.001
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 578 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622
E + GD ND + A +G+A+ A KE A+ + +
Sbjct: 214 EEIMAIGDQENDIAMIEYAGVGVAVDNA-IPSVKEVANFVTKSNL 257
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 38.7 bits (89), Expect = 0.002
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIIL 619
K + + G E GDG ND L A IG+AMG A E K +AD +
Sbjct: 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQA-KEDVKAAADYVTA 243
Query: 620 DDN 622
+
Sbjct: 244 PID 246
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (88), Expect = 0.002
Identities = 21/66 (31%), Positives = 26/66 (39%), Gaps = 4/66 (6%)
Query: 578 EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWGRSVY 637
+ V GD NDA L A AMG A E K+ A D+N + V + V
Sbjct: 207 QNVVAIGDSGNDAEMLKMARYSFAMGNA-AENIKQIARYATDDNNHEGALNVIQA---VL 262
Query: 638 INIQKF 643
N F
Sbjct: 263 DNTYPF 268
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 845 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.97 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.96 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.96 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.93 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.91 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.9 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.87 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.54 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.53 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.49 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.49 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.48 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.44 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.41 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.4 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.3 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.22 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.15 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.1 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.0 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.96 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.95 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.92 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.72 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.67 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.13 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.88 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.82 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.81 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.73 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.57 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.53 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.41 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 97.38 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 97.23 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 97.05 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 97.03 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 97.02 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.95 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.95 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 96.9 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 96.74 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.6 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 96.44 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 96.41 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 96.32 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 96.19 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.15 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 95.86 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 95.74 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 95.58 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 95.19 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 94.91 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 94.24 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 94.08 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 93.65 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 89.43 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.97 E-value=1e-30 Score=293.84 Aligned_cols=184 Identities=23% Similarity=0.311 Sum_probs=150.2
Q ss_pred HHHHhhcCCCChhhHHHHHHHHHHHHHhhhhhccCCCCcccccCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHhc
Q 003127 659 FSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNGDLMKRSPVGRKGNFISNVMWRNILGQSLYQFLIIWYLQTRG 738 (845)
Q Consensus 659 ~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (845)
+++.++..+.|+++.|++|+|+++|.+|+++++.|||++++|++||++++++++++.++..++.++++.+...+..++..
T Consensus 254 ~~~~~l~~p~pl~~~qILwinli~d~lpaiaL~~ep~d~~iM~~~Pr~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~ 333 (472)
T d1wpga4 254 FLTAALGLPEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDRPPRSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWW 333 (472)
T ss_dssp HHHHHSCCCCSCCHHHHHHHHHTTTHHHHHHHTTCCCCSGGGGSCCCCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCccccHHHHHHHHHHhHHHHHHHHhcCCCchhhhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33566788999999999999999999999999999999999999999999999999999999888887766554433222
Q ss_pred cccccC-----------------CCC---------CccchhhhHHHHHHHHHHHhccccccccccccccc-CCchhHHHH
Q 003127 739 KAVFRL-----------------DGP---------DPDLILNTLIFNTFVFCQVFNEISSREMEKINVFK-GILKNYVFV 791 (845)
Q Consensus 739 ~~~~~~-----------------~~~---------~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~-~~~~n~~~~ 791 (845)
..++.. +.. .....++|++|.+++++|++|.+++|+ .+.++|+ ++++|++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~rs-~~~s~~~~~~~~N~~l~ 412 (472)
T d1wpga4 334 FMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLS-ENQSLMRMPPWVNIWLL 412 (472)
T ss_dssp TTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHHHHHHHHHHHHHHHTTSC-SSCCTTTSCGGGCHHHH
T ss_pred HHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHHHHHHHHHHHHHHHHHhc-CCcchhhcCccccHHHH
Confidence 111100 000 011246899999999999999999995 4556665 778999999
Q ss_pred HHHHHHHHHHHHH--HHHhhhcccccCCChHHHHHHHHHHHHHHHHHHHHhhcc
Q 003127 792 AVLTCTVLFQIII--IELLGTFANTTPLNLQQWFVSILLGFLGMPIAAVLKLIQ 843 (845)
Q Consensus 792 ~~~~~~~~~~~~~--v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~i~K~~~ 843 (845)
.++++++++++++ +|+++.+|+++|+++.+|+++++++++.++++|++|++.
T Consensus 413 ~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El~K~~~ 466 (472)
T d1wpga4 413 GSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEILKFIA 466 (472)
T ss_dssp HHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999888877544 677899999999999999999999999999999999874
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=1.2e-29 Score=241.11 Aligned_cols=146 Identities=46% Similarity=0.691 Sum_probs=138.8
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCce----eeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI----AIEGPEFREKSDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~----~i~g~~~~~~~~~~~~~~~~~~~v~~~~~ 561 (845)
||+|++++++|+.||++|++++|+|||+..+|.++|+++|+..++.. .+.|.++......+..+...+..+|+|++
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 99999999999999999999999999999999999999999876543 57788888888888888888899999999
Q ss_pred hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHH
Q 003127 562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 633 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~g 633 (845)
|++|..+++.+|++ |++|+|+|||.||++||++||+||+|+ ++++.++++||+++.++++..+.++|++|
T Consensus 99 p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 99 PSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp HHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEET-TSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEec-cccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 99999999999998 999999999999999999999999999 89999999999999999999999999998
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.96 E-value=3.4e-28 Score=243.07 Aligned_cols=199 Identities=21% Similarity=0.241 Sum_probs=156.3
Q ss_pred CeEEEEEEEcCeeEEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCC----ceEEcCCchHHHHHHHHHHcC
Q 003127 292 HMTVLKACICEEIKEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGN----KTEILGTPTETAILEFGLLLG 367 (845)
Q Consensus 292 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~p~e~al~~~~~~~~ 367 (845)
.|+|+++|++++.++.+.............++..+.+..+..+|+++.+..++.+ .....|||+|.||++++.+.+
T Consensus 1 ~MTV~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a~~~~ 80 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIHEADTTEDQSGATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSC 80 (214)
T ss_dssp CCEEEEEEETTEEEECCCC------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHHHHHH
T ss_pred CeEEEEEEECCEEEEcCCCCcCCCcccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHHHHhC
Confidence 3899999999999887655444333334455667778888888988877654332 234589999999999999999
Q ss_pred CChHHhhhhcceEEEecCCCCCceEEEEEEcC--CCeEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHH
Q 003127 368 GDFQAERQASKIVKVEPFNSVKKQMGVVIELP--EGGFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEK 445 (845)
Q Consensus 368 ~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~--~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (845)
.+....+..+++++.+||+|.||+|+++++.+ ++.+++|+|||||.|+++|+.++. +|...|++++.++.+.+.+++
T Consensus 81 ~~~~~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~ 159 (214)
T d1q3ia_ 81 GSVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLE 159 (214)
T ss_dssp SCHHHHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHH
T ss_pred CCHHHHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHH
Confidence 99999999999999999999999999999865 456899999999999999998775 788999999999999999999
Q ss_pred HHHhhchhhhheeeecCCCC--------CCCCCCCCCceEEEEEeeecCCCChh
Q 003127 446 FASEALRTLCLACMEIGNEF--------SADAPIPTEGYTCIGIVGIKDPMRPG 491 (845)
Q Consensus 446 ~~~~G~r~l~~a~~~i~~~~--------~~~~~~~e~~~~~lG~~~~~d~l~~~ 491 (845)
|+.+|+||||+|||+++.+. .++.+..++|++|+|+++++||+|++
T Consensus 160 ~a~~GlRvLa~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 160 LGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp HHHTTCEEEEEEEEEECTTTSCTTCCCCTTTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred HhhCCcEEEEEEEEecCccccccccccChhhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 99999999999999998652 12335668999999999999999975
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.93 E-value=2.7e-26 Score=208.77 Aligned_cols=125 Identities=41% Similarity=0.619 Sum_probs=109.4
Q ss_pred EEEEEeeecCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeE
Q 003127 477 TCIGIVGIKDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQV 556 (845)
Q Consensus 477 ~~lG~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v 556 (845)
+..+.++++|++|++++++|+.|+++|++++|+|||+..++.++|+++|+.. +
T Consensus 11 ~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~~---------------------------v 63 (135)
T d2b8ea1 11 TGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDL---------------------------V 63 (135)
T ss_dssp CCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSE---------------------------E
T ss_pred ceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhhh---------------------------h
Confidence 3445788999999999999999999999999999999999999999999964 8
Q ss_pred EEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 557 MARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 557 ~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
+++++|++|..+++.+|+ ++.|+|+|||.||+|||++||+||||+ ++++.++++||+++.++++.++.++|+
T Consensus 64 ~~~~~p~~k~~~v~~~q~--~~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~~~aADivl~~~~l~~i~~aI~ 135 (135)
T d2b8ea1 64 IAEVLPHQKSEEVKKLQA--KEVVAFVGDGINDAPALAQADLGIAVG-SGSDVAVESGDIVLIRDDLRDVVAAIQ 135 (135)
T ss_dssp ECSCCHHHHHHHHHHHTT--TSCEEEEECSSSSHHHHHHSSEEEEEC-CC--------SEEESSCCTHHHHHHHC
T ss_pred ccccchhHHHHHHHHHHc--CCEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHHHHhCCEEEECCCHHHHHHHhC
Confidence 999999999999999986 468999999999999999999999999 899999999999999999999998863
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.91 E-value=6.6e-25 Score=192.33 Aligned_cols=98 Identities=35% Similarity=0.515 Sum_probs=88.8
Q ss_pred eeEEEECCeE--EEEecCCcCCCcEEEEcCCCeeeccEEEEeeC--ceeEecccCCCCCCcccccC------------CC
Q 003127 66 TVQVARNGFR--RKISIYDLLPGDIVHLCMGDQVPADGLFVSGF--SVLINESSLTGESEPVNVNA------------LN 129 (845)
Q Consensus 66 ~~~V~r~g~~--~~i~~~~l~~GDii~l~~G~~iPaD~~ll~~~--~~~Vdes~LtGEs~p~~k~~------------~~ 129 (845)
.++|+|+|++ ++|+++||+|||+|.+++||+|||||+|+++. ++.||||+|||||.|+.|.. ..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 5789999985 78999999999999999999999999999743 48899999999999999852 35
Q ss_pred CeEEeccEEEeceEEEEEEEEeecchhhHHHHhh
Q 003127 130 PFLLSGTKVQNGSCKMLVTTVGMRTQWGKLMATL 163 (845)
Q Consensus 130 ~~v~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~ 163 (845)
|++|+||.+.+|+++++|++||.+|.+|||.+++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 6899999999999999999999999999998753
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.90 E-value=9.7e-30 Score=277.70 Aligned_cols=322 Identities=12% Similarity=0.033 Sum_probs=212.4
Q ss_pred hhhhhccCcEEEEeccCCccCCCCeEEEEEEEcCee-EEecCCCCCCCCCCCCChhHHHHHHHHHHhcCCceEEecCCCc
Q 003127 269 AACETMGSATSICSDKTGTLTTNHMTVLKACICEEI-KEVDNSKGTPAFGSSIPASASKLLLQSIFNNTGGEVVIGEGNK 347 (845)
Q Consensus 269 ~~~e~lg~v~~i~~DKTGTLT~~~m~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 347 (845)
.+.|.||...++|+|||||+|.|+|++..+. .+.. ...+. ...++ ..++. .....|+.+...
T Consensus 31 ~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~-~~~il~~~k~--------~g~n~-~~dl~-~~~~~~~~~~~~------ 93 (380)
T d1qyia_ 31 MDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ-KDKILNKLKS--------LGLNS-NWDML-FIVFSIHLIDIL------ 93 (380)
T ss_dssp HCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT-TTHHHHHHHH--------TTCCC-HHHHH-HHHHHHHHHHHH------
T ss_pred hchhhcccceeeecCcccchhhhhheeeeec-chhhhHhhhh--------cCCCh-hHHHH-HHHHHHHHHHHH------
Confidence 4568999999999999999999999874321 1110 00000 00111 12221 111122211111
Q ss_pred eEEcCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCc
Q 003127 348 TEILGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGE 427 (845)
Q Consensus 348 ~~~~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~ 427 (845)
...++|++.+++...+..+......++.+.....+||++.+|+|++.....++.+..+.+|+++.+
T Consensus 94 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~------------- 159 (380)
T d1qyia_ 94 -KKLSHDEIEAFMYQDEPVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL------------- 159 (380)
T ss_dssp -TTSCHHHHHHHHHCSSCHHHHHTTSGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHT-------------
T ss_pred -hhcCCCcHHHHHHHHhhccchHHHHHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhc-------------
Confidence 115677888877655443333444556677778899999999998876543333334445555433
Q ss_pred eecCCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCC--hhHHHHHHHHHHcCCE
Q 003127 428 VVPLNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR--PGVKESVAICRSAGIT 505 (845)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~--~~~~~~I~~l~~~Gi~ 505 (845)
.+++..+..+.....+++++|+|++++|++..+..... ...+....|++..+++++ +++++++++|+++|++
T Consensus 160 --~~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~~----~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~ 233 (380)
T d1qyia_ 160 --HVSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKK----IARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFE 233 (380)
T ss_dssp --TCSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHCS----CCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCE
T ss_pred --CCcHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccccc----cchhhHhcccccccccccchhhHHHHHHHHHHCCCe
Confidence 12223344566778899999999999999876543211 112233458888888855 5999999999999999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCccC--CceeeeCcccccCCHHHH---------hhhcCCeeEEEEeChhcHHHHHHHHHh
Q 003127 506 VRMVTGDNINTAKAIARECGILTD--NGIAIEGPEFREKSDEEL---------SKLIPKIQVMARSSPMDKHTLVKHLRT 574 (845)
Q Consensus 506 v~~~TGd~~~ta~~ia~~lgi~~~--~~~~i~g~~~~~~~~~~~---------~~~~~~~~v~~~~~p~~K~~~v~~l~~ 574 (845)
++|+|||+..++..+++++|+... ...++++++......... ...+.....++|.+|.+|..+++.++.
T Consensus 234 v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~k~~iv~~~~~ 313 (380)
T d1qyia_ 234 LGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYINKQDNIV 313 (380)
T ss_dssp EEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHHHHCCCGGGHHHHHHCCTTCS
T ss_pred EEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHHHHHcCCCHHHHHHHHHHhCC
Confidence 999999999999999999999752 223444433211000000 000111225678999999999999998
Q ss_pred hcCCEEEEEcCCccCHHHHHhCC---eeEEeCCCCcHHHH----hccCEEeccCChhHHHHHH
Q 003127 575 TLGEVVAVTGDGTNDAPALHEAD---IGLAMGIAGTEVAK----ESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 575 ~~g~~v~~~GDg~ND~~ml~~A~---vgIamg~~~~~~ak----~~ad~v~~~~~~~~i~~~i 630 (845)
. ++.++|+|||.||++|+|+|| +||+||..+++..+ ..||+++.+ +..+.+++
T Consensus 314 ~-~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~--~~el~~il 373 (380)
T d1qyia_ 314 N-KDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINH--LGELRGVL 373 (380)
T ss_dssp C-TTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESS--GGGHHHHH
T ss_pred C-CCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECC--HHHHHHHH
Confidence 8 899999999999999999999 99999977776544 379999954 77776654
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.87 E-value=1.9e-22 Score=204.75 Aligned_cols=161 Identities=20% Similarity=0.198 Sum_probs=132.4
Q ss_pred hHHHHHHHHHHhcCCceEEecC-CCceEEcCCchHHHHHHHHHHcCCChHH----------------hhhhcceEEEecC
Q 003127 323 SASKLLLQSIFNNTGGEVVIGE-GNKTEILGTPTETAILEFGLLLGGDFQA----------------ERQASKIVKVEPF 385 (845)
Q Consensus 323 ~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~p~e~al~~~~~~~~~~~~~----------------~~~~~~~l~~~~F 385 (845)
+..+.+..+..+||++....++ .+.+...|+|+|.||+.++.+.|.+... .++.+++++.+||
T Consensus 48 ~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~pF 127 (239)
T d1wpga3 48 DGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLEF 127 (239)
T ss_dssp HHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEeee
Confidence 3455667778889888877653 4556778999999999999999876432 2467899999999
Q ss_pred CCCCceEEEEEEcCCC-----eEEEEEeCcHHHHHHhchhccccCCceecCCHHHHHHHHHHHHHH--HHhhchhhhhee
Q 003127 386 NSVKKQMGVVIELPEG-----GFRVHCKGASEIILAACDKFLNSNGEVVPLNEAAVNHLNETIEKF--ASEALRTLCLAC 458 (845)
Q Consensus 386 ~s~~k~~sviv~~~~~-----~~~~~~kGa~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~G~r~l~~a~ 458 (845)
+|+||||+++++.+++ .+++|+|||||.|+++|+.++. ++...|++++.++.+.+..+++ +++|+|||++||
T Consensus 128 ~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~ 206 (239)
T d1wpga3 128 SRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206 (239)
T ss_dssp ETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred cccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEE
Confidence 9999999999997654 4789999999999999998765 6778899999999999999987 679999999999
Q ss_pred eecCCCCCC-------CCCCCCCceEEEEEeee
Q 003127 459 MEIGNEFSA-------DAPIPTEGYTCIGIVGI 484 (845)
Q Consensus 459 ~~i~~~~~~-------~~~~~e~~~~~lG~~~~ 484 (845)
|+++.+... ....+|+|++|+|++++
T Consensus 207 k~~~~~~~~~~~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 207 RDTPPKREEMVLDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp ESSCCCGGGCCTTCGGGHHHHTCSEEEEEEEEE
T ss_pred EECCcccccccccchhhHHHhcCCCEEEEEECC
Confidence 999865321 12346889999999986
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.54 E-value=1.9e-14 Score=144.39 Aligned_cols=146 Identities=20% Similarity=0.228 Sum_probs=109.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccc-------------------------
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFR------------------------- 540 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~------------------------- 540 (845)
..+.+.+.++|++|+++|++++++|||+...+..+++.+++..+- ..-+|..+.
T Consensus 18 ~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~-i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T d1wr8a_ 18 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPV-VAEDGGAISYKKKRIFLASMDEEWILWNEIRKRF 96 (230)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCE-EEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHC
T ss_pred CccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCccc-ccccceeeeccccccccccccHHHHHHHHHHHhc
Confidence 358899999999999999999999999999999999999886431 000110000
Q ss_pred ---------------------cCCHHHHhh---hc-CC-------eeEEEEeChhcHHHHHHHHHhhcC---CEEEEEcC
Q 003127 541 ---------------------EKSDEELSK---LI-PK-------IQVMARSSPMDKHTLVKHLRTTLG---EVVAVTGD 585 (845)
Q Consensus 541 ---------------------~~~~~~~~~---~~-~~-------~~v~~~~~p~~K~~~v~~l~~~~g---~~v~~~GD 585 (845)
....+.+.+ .+ .. ..+-......+|...++.+.++++ +.++++||
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD 176 (230)
T d1wr8a_ 97 PNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD 176 (230)
T ss_dssp TTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC
T ss_pred ccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeec
Confidence 001111111 11 11 112223345789999999887755 57899999
Q ss_pred CccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHHH
Q 003127 586 GTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKWG 633 (845)
Q Consensus 586 g~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~g 633 (845)
|.||++|++.||+||||+ |+.+.+|+.||+++.+++.+++.+++++.
T Consensus 177 ~~NDi~ml~~ag~~vav~-na~~~~k~~A~~v~~~~~~~gv~~~i~~~ 223 (230)
T d1wr8a_ 177 GENDLDAFKVVGYKVAVA-QAPKILKENADYVTKKEYGEGGAEAIYHI 223 (230)
T ss_dssp SGGGHHHHHHSSEEEECT-TSCHHHHTTCSEECSSCHHHHHHHHHHHH
T ss_pred CccHHHHHHHCCeEEEEC-CCCHHHHHhCCEEECCCCcCHHHHHHHHH
Confidence 999999999999999999 89999999999999999999999988754
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=1.1e-14 Score=150.59 Aligned_cols=146 Identities=24% Similarity=0.330 Sum_probs=108.3
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceee--eCcccc---------c------------
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI--EGPEFR---------E------------ 541 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i--~g~~~~---------~------------ 541 (845)
+.++.+++.++|++|+++|++++++|||++..+..+.+++++..+...++ +|..+. .
T Consensus 19 ~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~ 98 (271)
T d1rkqa_ 19 DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLE 98 (271)
T ss_dssp TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHH
Confidence 34688999999999999999999999999999999999999876533111 111000 0
Q ss_pred ------------------------C------------------------------------CHHHHh---hhcC-----C
Q 003127 542 ------------------------K------------------------------------SDEELS---KLIP-----K 553 (845)
Q Consensus 542 ------------------------~------------------------------------~~~~~~---~~~~-----~ 553 (845)
. ..+... +.+. .
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 178 (271)
T d1rkqa_ 99 KLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEK 178 (271)
T ss_dssp HHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHH
T ss_pred HHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcc
Confidence 0 000000 0000 0
Q ss_pred eeE------EEEeCh--hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCC
Q 003127 554 IQV------MARSSP--MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDN 622 (845)
Q Consensus 554 ~~v------~~~~~p--~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~ 622 (845)
..+ +....| .+|+..++.++++++ +.++++|||.||++||+.||+|+||+ |+.+.+|+.||+++.+++
T Consensus 179 ~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~-na~~~lk~~a~~i~~~~~ 257 (271)
T d1rkqa_ 179 YTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVD-NAIPSVKEVANFVTKSNL 257 (271)
T ss_dssp EEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHCSEECCCTT
T ss_pred eEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCC
Confidence 111 111223 479999999998765 46889999999999999999999999 999999999999999999
Q ss_pred hhHHHHHHH
Q 003127 623 FSTIVTVAK 631 (845)
Q Consensus 623 ~~~i~~~i~ 631 (845)
.+|++++++
T Consensus 258 ~~Gv~~~l~ 266 (271)
T d1rkqa_ 258 EDGVAFAIE 266 (271)
T ss_dssp TTHHHHHHH
T ss_pred cChHHHHHH
Confidence 999999886
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.49 E-value=7.3e-14 Score=139.95 Aligned_cols=147 Identities=20% Similarity=0.201 Sum_probs=108.2
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCcc-c-ccCC--------------
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGPE-F-REKS-------------- 543 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~~-~-~~~~-------------- 543 (845)
+.++.+++.+++++|++.|++++++|||+...+..+++.+|+..+ ++ .+...+. . ....
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 456889999999999999999999999999999999999998643 11 0111000 0 0000
Q ss_pred ------------------------HHHHhhhc--CCeeEE-------EEeChhcHHHHHHHHHhhcC---CEEEEEcCCc
Q 003127 544 ------------------------DEELSKLI--PKIQVM-------ARSSPMDKHTLVKHLRTTLG---EVVAVTGDGT 587 (845)
Q Consensus 544 ------------------------~~~~~~~~--~~~~v~-------~~~~p~~K~~~v~~l~~~~g---~~v~~~GDg~ 587 (845)
.+.+.... ....++ ......+|+..++.+.+++| +.++++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 00011000 111111 11233689999999987765 5688899999
Q ss_pred cCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 588 NDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 588 ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
||++|++.||+||||+ |+.+.+|+.||+++..++.+++.+++++
T Consensus 178 nD~~m~~~a~~~vav~-na~~~~k~~ad~v~~~~~~~gi~~~l~~ 221 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDNIKAVSDFVSDYSYGEEIGQIFKH 221 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHHHHHHCSEECSCCTTHHHHHHHHH
T ss_pred chHHHHHHCCeEEEEC-CCcHHHHHhCCEEECCCCcCHHHHHHHH
Confidence 9999999999999999 8999999999999999999999998864
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.49 E-value=6e-14 Score=145.94 Aligned_cols=69 Identities=32% Similarity=0.404 Sum_probs=63.6
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.++++|||.||.+||+.||+||||+ ||++.+|+.||+++.+++.+|+.++|++
T Consensus 212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~-na~~~~k~~A~~v~~~~~~~Gv~~~l~~ 283 (285)
T d1nrwa_ 212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMG-NAREDIKSIADAVTLTNDEHGVAHMMKH 283 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHHH
T ss_pred chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHHH
Confidence 379999999998876 56899999999999999999999999 9999999999999999999999998864
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=2.7e-14 Score=147.33 Aligned_cols=68 Identities=28% Similarity=0.318 Sum_probs=62.9
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+++++| +.++++|||.||++||+.||+||||+ |+.+.+|+.||+++.+++.+|+++.|+
T Consensus 189 ~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~lk~~A~~v~~~~~~~Gva~~i~ 259 (269)
T d1rlma_ 189 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAENIKQIARYATDDNNHEGALNVIQ 259 (269)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHHHHHHCSEECCCGGGTHHHHHHH
T ss_pred hHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 569999999988866 46889999999999999999999999 899999999999999999999998886
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.44 E-value=6.4e-14 Score=143.75 Aligned_cols=69 Identities=30% Similarity=0.365 Sum_probs=63.4
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+|+..++.+.+++| +.++++|||.||++||+.||.||||+ ||.+.+|+.||+++.+++.+|+.++|++
T Consensus 185 ~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~lk~~A~~vt~~~~~~Gv~~~l~~ 256 (260)
T d2rbka1 185 DTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKEDVKAAADYVTAPIDEDGISKAMKH 256 (260)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHHHSSEECCCGGGTHHHHHHHH
T ss_pred CCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHHHHHhCCEEeCCCCccHHHHHHHH
Confidence 579999999988766 57888999999999999999999999 9999999999999999999999999865
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.41 E-value=2.7e-13 Score=139.61 Aligned_cols=68 Identities=32% Similarity=0.455 Sum_probs=62.6
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+.+++| +.|+++|||.||++||+.||+||||+ ||.+.+|+.||+++.+++.+|++++++
T Consensus 189 ~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~~k~~A~~i~~~~~~~Gva~~i~ 259 (267)
T d1nf2a_ 189 VDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEKVKEASDIVTLTNNDSGVSYVLE 259 (267)
T ss_dssp CCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHHHHHHCSEECCCTTTTHHHHHHT
T ss_pred CchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHHHHHhCCEEcCCCCccHHHHHHH
Confidence 479999999988766 46888899999999999999999999 999999999999999999999999875
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.40 E-value=3.2e-13 Score=140.04 Aligned_cols=68 Identities=25% Similarity=0.284 Sum_probs=58.7
Q ss_pred hcHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccC-ChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDD-NFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~-~~~~i~~~i~ 631 (845)
..|+..++.+.+.++ +.++++|||.||.+||+.||+|+||+ ||.+.+|+.||+++.++ +..++.++++
T Consensus 206 ~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~-na~~~~k~~a~~v~~~~~~~g~v~~~l~ 277 (283)
T d2b30a1 206 HDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVA-NATDSAKSHAKCVLPVSHREGAVAYLLK 277 (283)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECT-TCCHHHHHHSSEECSSCTTTTHHHHHHH
T ss_pred chhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeC-CCCHHHHHhCCEEECCcCCCcHHHHHHH
Confidence 579999999888755 57999999999999999999999999 99999999999999755 4455777764
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.30 E-value=4.2e-12 Score=120.38 Aligned_cols=107 Identities=19% Similarity=0.252 Sum_probs=91.1
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHHHHHHHHH
Q 003127 494 ESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKHTLVKHLR 573 (845)
Q Consensus 494 ~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~ 573 (845)
.+|+.|++.|+.+.++||+....+...++++++.. ++. ...+|...++.+.
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~---------------------------~~~--~~~~K~~~l~~~~ 89 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL---------------------------FFL--GKLEKETACFDLM 89 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------EEE--SCSCHHHHHHHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------ccc--ccccHHHHHHHHH
Confidence 48999999999999999999999999999999863 222 3457877777776
Q ss_pred hhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhH-HHHHH
Q 003127 574 TTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFST-IVTVA 630 (845)
Q Consensus 574 ~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~-i~~~i 630 (845)
++++ +.|+++||+.||++||+.|++|+||+ ++.+.+|+.||+|+..+.-+| +.+++
T Consensus 90 ~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~vk~~A~~Vt~~~GG~GavrE~~ 149 (177)
T d1k1ea_ 90 KQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIYVKNAVDHVLSTHGGKGAFREMS 149 (177)
T ss_dssp HHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHHHHTTSSEECSSCTTTTHHHHHH
T ss_pred HHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHHHHHhCCEEeCCCCCCchHHHHH
Confidence 6545 68999999999999999999999999 999999999999999887666 44443
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.22 E-value=1.8e-11 Score=123.73 Aligned_cols=141 Identities=15% Similarity=0.153 Sum_probs=100.8
Q ss_pred hHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceee-eCccccc---------------CC-----------
Q 003127 491 GVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAI-EGPEFRE---------------KS----------- 543 (845)
Q Consensus 491 ~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i-~g~~~~~---------------~~----------- 543 (845)
+..+++.++++.|++++++|||+...+..+.+++++..+...+- +|..+.. ..
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 45566777788999999999999999999999999876532111 1111100 00
Q ss_pred -------------------------H---HHHhhh----cCCee--------EEEEeChhcHHHHHHHHHhhcC---CEE
Q 003127 544 -------------------------D---EELSKL----IPKIQ--------VMARSSPMDKHTLVKHLRTTLG---EVV 580 (845)
Q Consensus 544 -------------------------~---~~~~~~----~~~~~--------v~~~~~p~~K~~~v~~l~~~~g---~~v 580 (845)
+ +.+.+. ..... +-......+|+..++.+.+.+| +.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0 001000 01111 1112334689999999998866 568
Q ss_pred EEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccC-------EEeccCChhHHHHHHHH
Q 003127 581 AVTGDGTNDAPALHEADIGLAMGIAGTEVAKESAD-------VIILDDNFSTIVTVAKW 632 (845)
Q Consensus 581 ~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad-------~v~~~~~~~~i~~~i~~ 632 (845)
+++|||.||.+||+.||.|+||+ |+.+.+|+.|| ++...++.+|+.+++++
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~~lk~~a~~~~~~~~~~~~~~~~~Gi~e~l~~ 239 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQPELLHWYDQWGDSRHYRAQSSHAGAILEAIAH 239 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCHHHHHHHHHHCCTTEEECSSCHHHHHHHHHHH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCHHHHHHhhcccccceEEcCCCCccHHHHHHHH
Confidence 88999999999999999999999 99999999888 67778888899998865
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.15 E-value=1.9e-11 Score=123.14 Aligned_cols=132 Identities=15% Similarity=0.114 Sum_probs=87.6
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----Cc-eeeeCcccc-------------------
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTD----NG-IAIEGPEFR------------------- 540 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~----~~-~~i~g~~~~------------------- 540 (845)
.+...+.++++|++|+++|++++++|||++..+..+.+++++..+ ++ .+.......
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGI 94 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCSCEEETTTTEEEECTTCCC----------CEEEECSC
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccccccccCCcEEEcCCCceecccchhHHHHHHHHHHhh
Confidence 455678899999999999999999999999999999999998642 11 111100000
Q ss_pred ----------------------cC-----------CHHHHhhhcC----------------------CeeEE------EE
Q 003127 541 ----------------------EK-----------SDEELSKLIP----------------------KIQVM------AR 559 (845)
Q Consensus 541 ----------------------~~-----------~~~~~~~~~~----------------------~~~v~------~~ 559 (845)
.. ..+....... ...+. .-
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (243)
T d1wzca1 95 RVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTV 174 (243)
T ss_dssp CHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBCSSSCHHHHHHHTTCEEEECSSSEEE
T ss_pred hHHHHHHHHHhhhhhcccchhhhhhHHHHHHhhcCchhHHHHHHhhhcchhhhhhhhHHHHHhhhhcCeEEeecccccch
Confidence 00 0000000000 00000 01
Q ss_pred eChhcHHHHHHHHHhhcC----CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEE
Q 003127 560 SSPMDKHTLVKHLRTTLG----EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVI 617 (845)
Q Consensus 560 ~~p~~K~~~v~~l~~~~g----~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v 617 (845)
.....|...++.+.++++ +.++++|||.||++||+.||.||||| |+.+.+++.+|.+
T Consensus 175 ~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~-Na~~~~~~~~~~i 235 (243)
T d1wzca1 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVG-SLKHKKAQNVSSI 235 (243)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEES-SCCCTTCEEESCH
T ss_pred hhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeC-CCChHHHhhhhHH
Confidence 122568877777665432 48889999999999999999999999 8888877776654
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.10 E-value=6.9e-11 Score=116.94 Aligned_cols=124 Identities=19% Similarity=0.278 Sum_probs=91.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE----eCh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR----SSP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~----~~p 562 (845)
+++|++.+.++.||++|++++++||.....+.++++.+|+...+ ++.. ++...... ...-+.. ..+
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~--v~an-~~~~~~~G-------~~~g~~~~~p~~~~ 151 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN--VFAN-RLKFYFNG-------EYAGFDETQPTAES 151 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG--EEEE-CEEECTTS-------CEEEECTTSGGGST
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc--eeee-eeeeeehh-------ccccceeeeeeecc
Confidence 46899999999999999999999999999999999999997431 1100 00000000 0000001 235
Q ss_pred hcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCeeEEeCCC-CcHHHHhccCEEecc
Q 003127 563 MDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADIGLAMGIA-GTEVAKESADVIILD 620 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~vgIamg~~-~~~~ak~~ad~v~~~ 620 (845)
..|.++++.++++.+ +.++++|||.||++|++.||++||++.+ ..+..++.||+++.+
T Consensus 152 ~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~ 211 (217)
T d1nnla_ 152 GGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITD 211 (217)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESC
T ss_pred chHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCC
Confidence 779999999987644 5789999999999999999999999733 345677889999855
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.00 E-value=3.5e-10 Score=110.62 Aligned_cols=131 Identities=18% Similarity=0.232 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE--eChh
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR--SSPM 563 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~--~~p~ 563 (845)
.++.+++.+.++.++..|..++++||.....+....++.+....-...+..+... ....... ..+.
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 141 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGK------------LTGDVEGEVLKEN 141 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEETTE------------EEEEEECSSCSTT
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccccc------------ccccccccccccc
Confidence 4678889999999999999999999999999999999888764211111100000 0000000 1223
Q ss_pred cHHHHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHH
Q 003127 564 DKHTLVKHLRTTLG---EVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 564 ~K~~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i 630 (845)
.|...++.+.+.++ +.++++|||.||++|++.||+|||| |+.+..|+.||+++.++++++|.++|
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~~lk~~Ad~vi~~~d~~~vl~~l 209 (210)
T d1j97a_ 142 AKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKPILKEKADICIEKRDLREILKYI 209 (210)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCHHHHTTCSEEECSSCGGGGGGGC
T ss_pred cccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCHHHHHhCCEEEcCCCHHHHHHHh
Confidence 44555555444322 5688899999999999999999999 58899999999999988899887654
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.96 E-value=1.5e-09 Score=107.91 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=39.8
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILT 528 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~ 528 (845)
..+.+.+++++++|+++|++++++|||+...+..+.+++++..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 3578899999999999999999999999999999999999863
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.95 E-value=2e-09 Score=104.72 Aligned_cols=130 Identities=17% Similarity=0.120 Sum_probs=91.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
+..++....++.+ +.+.+.+..|+.............+............. ...........+..+.
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~~~~~~~~~~~~ 135 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD------------SDRVVGYQLRQKDPKR 135 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECT------------TSCEEEEECCSSSHHH
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcceeeeec------------ccccccccccchhhHH
Confidence 3455666666655 57899999999999999999999998643111110000 0011123334455667
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
..++.++.. .+.|+++|||.||++||+.||+||||+ +..+..++++|+++. ++++++.+.|.+
T Consensus 136 ~~~~~~~i~-~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~v~~~~~~~~~~-~~~~d~~~~~~~ 198 (206)
T d1rkua_ 136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAV-HTYEDLKREFLK 198 (206)
T ss_dssp HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEES-CCHHHHHHCTTSCEE-CSHHHHHHHHHH
T ss_pred HHHHHhccc-ccceEEecCCccCHHHHHhCCccEEEC-CCHHHHHhCCCceee-cCHHHHHHHHHH
Confidence 777888777 789999999999999999999999995 666677788899775 457777776644
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.92 E-value=8.1e-10 Score=109.73 Aligned_cols=143 Identities=13% Similarity=0.081 Sum_probs=101.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC---ceeeeCcccccCCHHHHhhhcCCeeEEEEeChh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN---GIAIEGPEFREKSDEELSKLIPKIQVMARSSPM 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~---~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~ 563 (845)
++.|++.+.++.|+++|++++++|+.....+..+.+++|+.... .....+...... ..........+..|.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~an~~~~~~~~~~~~------~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHASFDNDYIHID------WPHSCKGTCSNQCGC 148 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEEEEEECSSSBCEEE------CTTCCCTTCCSCCSS
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceeeeeEEEeCCcceec------cccccccccccCCHH
Confidence 47899999999999999999999999999999999999876421 011111111000 000001122345778
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhc-cCEEeccCChhHHHHHHHHHHHHHH
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKES-ADVIILDDNFSTIVTVAKWGRSVYI 638 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~-ad~v~~~~~~~~i~~~i~~gR~~~~ 638 (845)
.|..+++.++.. ++.++++||+.||++|+++||+++|++ ...+.+++. .++. .-++++.+...+++-....+
T Consensus 149 ~~~~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~-~~~~~~~~~~~~~~-~~~d~~~i~~~l~~~~~~~~ 221 (226)
T d2feaa1 149 CKPSVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARD-YLLNECREQNLNHL-PYQDFYEIRKEIENVKEVQE 221 (226)
T ss_dssp CHHHHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECH-HHHHHHHHTTCCEE-CCSSHHHHHHHHHTSHHHHH
T ss_pred HHHHHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEec-chHHHHHHcCCCee-ecCCHHHHHHHHHHHHHHHH
Confidence 899999999877 789999999999999999999999998 555554443 4443 34578888887766544443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.72 E-value=1.1e-09 Score=109.53 Aligned_cols=55 Identities=13% Similarity=0.244 Sum_probs=48.9
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCC----ccCHHHHHhCC-eeEEeCCCCcHHHHhccCEEe
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDG----TNDAPALHEAD-IGLAMGIAGTEVAKESADVII 618 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg----~ND~~ml~~A~-vgIamg~~~~~~ak~~ad~v~ 618 (845)
.+|+..++.|.+...+.|+++||+ .||.+||+.|+ .|+||+ |+.|.+|..+|+++
T Consensus 184 vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~~k~~~~~~~ 243 (244)
T d2fuea1 184 WDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDTVQRCREIFF 243 (244)
T ss_dssp CSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHHHHHHHHhcC
Confidence 689999999987645789999995 59999999998 799999 99999999999875
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.67 E-value=3.1e-08 Score=97.76 Aligned_cols=62 Identities=19% Similarity=0.382 Sum_probs=46.9
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCEEeccCChhHHHHHHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
.+|+..++.+.++ +.++++||+.||++||+.|+.|+||+ +|.. +.+|++.+.+ .+.+.++++
T Consensus 158 ~~Kg~al~~l~~~--~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~~--~~~A~~~~~~--~~ev~~~l~ 219 (229)
T d1u02a_ 158 VNKGSAIRSVRGE--RPAIIAGDDATDEAAFEANDDALTIK-VGEG--ETHAKFHVAD--YIEMRKILK 219 (229)
T ss_dssp CCHHHHHHHHHTT--SCEEEEESSHHHHHHHHTTTTSEEEE-ESSS--CCCCSEEESS--HHHHHHHHH
T ss_pred CCHHHHHHHHhcc--ccceeecCCCChHHHHhccCCeEEEE-eCCC--CccCeEEcCC--HHHHHHHHH
Confidence 6899999999876 45678899999999999997766665 3332 5689999865 555655553
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.13 E-value=2.7e-07 Score=91.54 Aligned_cols=52 Identities=21% Similarity=0.369 Sum_probs=39.4
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcC----CccCHHHHHhCC-eeEEeCCCCcHHHHhccCE
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGD----GTNDAPALHEAD-IGLAMGIAGTEVAKESADV 616 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GD----g~ND~~ml~~A~-vgIamg~~~~~~ak~~ad~ 616 (845)
.+|+..++.|.....+.++++|| |.||++||+.|| .|++|+ + .+.+++.++.
T Consensus 184 vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~-~~~~~~~~~~ 240 (243)
T d2amya1 184 WDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-A-PEDTRRICEL 240 (243)
T ss_dssp CSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-S-HHHHHHHHHH
T ss_pred cCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-C-HHHHHHHHHH
Confidence 68999999887654578999999 789999999998 678776 4 5556665543
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.88 E-value=1e-05 Score=79.29 Aligned_cols=127 Identities=16% Similarity=0.183 Sum_probs=83.8
Q ss_pred CCChhHHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAG-ITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~G-i~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++-|++.+.+++|++.| +++.++|+.+...+....+.+|+...-..++.+++.... ...|..-
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~----------------k~~p~~~ 154 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADDALDR----------------NELPHIA 154 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTTCSSG----------------GGHHHHH
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccccccc----------------cchhHHH
Confidence 34689999999999987 899999999999999999999997643333333221100 0011111
Q ss_pred HHHHHHHHhh--cCCEEEEEcCCccCHHHHHhCCe---eEEeCCCCcHH-HHhccCEEeccCChhHHHHHHH
Q 003127 566 HTLVKHLRTT--LGEVVAVTGDGTNDAPALHEADI---GLAMGIAGTEV-AKESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 566 ~~~v~~l~~~--~g~~v~~~GDg~ND~~ml~~A~v---gIamg~~~~~~-ak~~ad~v~~~~~~~~i~~~i~ 631 (845)
...++.+... ..+.++||||+.+|+.|-+.||+ +|+.|....+. .+..||+++.+ ++.+.++|.
T Consensus 155 ~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~--~~el~~~l~ 224 (228)
T d2hcfa1 155 LERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKN--FAETDEVLA 224 (228)
T ss_dssp HHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESC--SCCHHHHHH
T ss_pred HHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECC--HHHHHHHHH
Confidence 2222333211 12579999999999999999994 45556333333 44468999854 777776654
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=1.1e-05 Score=78.31 Aligned_cols=117 Identities=16% Similarity=0.212 Sum_probs=82.0
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+++++|+++|+++.++|+.+...+..+.+.+|+...-..++.+++... .+..|+--.
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~~~~~----------------~Kp~~~~~~ 151 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPY----------------SKPHPQVYL 151 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECTTSSC----------------CTTSTHHHH
T ss_pred cccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----------------chhhHHHHH
Confidence 3568999999999999999999999999999999999999754434444433210 112233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe-C--CCCcHHHHhccCEEecc
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM-G--IAGTEVAKESADVIILD 620 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam-g--~~~~~~ak~~ad~v~~~ 620 (845)
.+++.+.-. .+.++++||+.+|+.|-+.||+.... . ....+.....||+++.+
T Consensus 152 ~~~~~l~~~-~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~ 207 (218)
T d1te2a_ 152 DCAAKLGVD-PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSS 207 (218)
T ss_dssp HHHHHHTSC-GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSC
T ss_pred HHHHHcCCC-chhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECC
Confidence 555555544 47899999999999999999975432 2 11112233568988765
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.81 E-value=1.2e-05 Score=78.13 Aligned_cols=124 Identities=22% Similarity=0.281 Sum_probs=86.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.++.|++.|+++.++|+.....+....+++|+...-..++...+... ....|+--.
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~~~~~----------------~kp~p~~~~ 158 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQSLPE----------------IKPHPAPFY 158 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTTSSS----------------CTTSSHHHH
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccccccc----------------ccccchhhH
Confidence 4679999999999999999999999999999999999999754333333322110 112234344
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC--CCC-cHHHHhccCEEeccCChhHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG--IAG-TEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg--~~~-~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
.+.+.++-. .+.++++||+.+|+.+-+.||+ .|.+. .+. .+.....+|+++.+ +..+.++
T Consensus 159 ~~~~~~~~~-~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~--l~dL~~i 222 (224)
T d2hsza1 159 YLCGKFGLY-PKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDD--FADILKI 222 (224)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESS--GGGGGGG
T ss_pred HHHHHhhhh-hhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECC--HHHHHHh
Confidence 455555544 5789999999999999999997 34343 111 22345568999854 6666554
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.73 E-value=2.3e-05 Score=78.19 Aligned_cols=97 Identities=20% Similarity=0.171 Sum_probs=71.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-ceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDN-GIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
++.|++.++++.|+++|+++.++||.+...+..+.+.+|+..-. +.++++++.. ..+..|+.-
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~d~~~----------------~~KP~p~~~ 162 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVP----------------AGRPYPWMC 162 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGGGSS----------------CCTTSSHHH
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccccccc----------------ccccChHHH
Confidence 57899999999999999999999999999999999999986421 2333332211 012234444
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG 599 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg 599 (845)
..+++.+.....+.++++||+.+|+.+-+.||+-
T Consensus 163 ~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ 196 (257)
T d1swva_ 163 YKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMW 196 (257)
T ss_dssp HHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSE
T ss_pred HHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCE
Confidence 5566666543136799999999999999999973
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.57 E-value=5.6e-05 Score=72.60 Aligned_cols=118 Identities=17% Similarity=0.145 Sum_probs=81.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+.++.++..| ++.++|+.+...++...+.+|+...-..++. +...+..|-
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~----------------------~~~~~~~~p 140 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFDGIYG----------------------SSPEAPHKA 140 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE----------------------ECSSCCSHH
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccccccc----------------------ccccccccc
Confidence 46789999999998775 8999999999999999999998754322222 222233344
Q ss_pred HHHHHHHhhcC---CEEEEEcCCccCHHHHHhCCe-eEEe--CCCCcHHH-HhccCEEeccCChhHHHHH
Q 003127 567 TLVKHLRTTLG---EVVAVTGDGTNDAPALHEADI-GLAM--GIAGTEVA-KESADVIILDDNFSTIVTV 629 (845)
Q Consensus 567 ~~v~~l~~~~g---~~v~~~GDg~ND~~ml~~A~v-gIam--g~~~~~~a-k~~ad~v~~~~~~~~i~~~ 629 (845)
...+...+++| +.++++||+.||+.+-+.||+ .|++ |.+..+.. ...+|+++.+ +..+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~--l~el~~~ 208 (210)
T d2ah5a1 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHK--PLEVLAY 208 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESS--TTHHHHH
T ss_pred cccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECC--HHHHHHH
Confidence 44444444434 678899999999999999997 3444 42333333 3458999855 6666554
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.53 E-value=9.7e-05 Score=74.26 Aligned_cols=131 Identities=15% Similarity=0.242 Sum_probs=82.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCc-ccccCCHHHHhhhcCCeeEEEE-----e
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGP-EFREKSDEELSKLIPKIQVMAR-----S 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~-~~~~~~~~~~~~~~~~~~v~~~-----~ 560 (845)
++|+++++.++.|++.|+++.++||--...+.++++++|+..++..+++.. ++.. .. +... .
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~---~~---------~~~~~~~~~i 202 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDE---NG---------VLKGFKGELI 202 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECT---TS---------BEEEECSSCC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeC---Ce---------eEeeccCCcc
Confidence 589999999999999999999999999999999999999986654333211 1100 00 0011 1
Q ss_pred ChhcHHHHH----HHHHhhc-CCEEEEEcCCccCHHHHHhC---CeeEEeCC-CCc-HH----HHhccCEEeccCChhHH
Q 003127 561 SPMDKHTLV----KHLRTTL-GEVVAVTGDGTNDAPALHEA---DIGLAMGI-AGT-EV----AKESADVIILDDNFSTI 626 (845)
Q Consensus 561 ~p~~K~~~v----~~l~~~~-g~~v~~~GDg~ND~~ml~~A---~vgIamg~-~~~-~~----ak~~ad~v~~~~~~~~i 626 (845)
....|...+ ...+... ...+.++|||.||+.|.+.+ +.+++.|- +.. +. -+++-|+|+.+|.--.+
T Consensus 203 ~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~~~ee~l~~y~~~~DIVl~~d~~~~v 282 (291)
T d2bdua1 203 HVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEV 282 (291)
T ss_dssp CTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECSCHHHHHHHHHHHSSEEEETCCBCHH
T ss_pred ccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHhhHHHHHHHHHhcCCEEEecCCChhH
Confidence 223443333 2222221 35788889999999999743 33333331 222 21 23678999887665554
Q ss_pred HHH
Q 003127 627 VTV 629 (845)
Q Consensus 627 ~~~ 629 (845)
+..
T Consensus 283 ~~~ 285 (291)
T d2bdua1 283 VNS 285 (291)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=0.00017 Score=67.61 Aligned_cols=136 Identities=17% Similarity=0.143 Sum_probs=76.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHH---------------HHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINT---------------AKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~t---------------a~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++-|++.+++++|+++|++++++|..+... ........|+... ...+......... ...
T Consensus 27 ~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~cp~~p~~~~-~~~---- 100 (182)
T d2gmwa1 27 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLD-GIYYCPHHPQGSV-EEF---- 100 (182)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCCCS-EEEEECCBTTCSS-GGG----
T ss_pred eECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccccc-ceeeccccccccc-ccc----
Confidence 456899999999999999999999987321 1111222222211 0111000000000 000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee--EEeC--CCCcHHHHhccCEEeccCChhHHH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG--LAMG--IAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg--Iamg--~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
.....+....|.--..+++.+.-. .+.+.||||..+|+.+=+.||++ +.+. ....+.....||+++.+ +..+.
T Consensus 101 ~~~~~~rKP~p~m~~~~~~~~~i~-~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~--l~dl~ 177 (182)
T d2gmwa1 101 RQVCDCRKPHPGMLLSARDYLHID-MAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNS--LADLP 177 (182)
T ss_dssp BSCCSSSTTSCHHHHHHHHHHTBC-GGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESC--GGGHH
T ss_pred cccccccCCccccccchhhhcccc-cccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECC--HHHHH
Confidence 000001122233335555555544 36789999999999999999985 3333 12234566679999855 88888
Q ss_pred HHHH
Q 003127 628 TVAK 631 (845)
Q Consensus 628 ~~i~ 631 (845)
++|+
T Consensus 178 ~~ik 181 (182)
T d2gmwa1 178 QAIK 181 (182)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7765
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=97.38 E-value=0.00021 Score=69.60 Aligned_cols=126 Identities=16% Similarity=0.157 Sum_probs=83.9
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+++++|+ +|++++++|+..........+.+|+...-..++...+.. ..+.+|+-=.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~~~~~~ 162 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDSITTSEEAG----------------FFKPHPRIFE 162 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEHHHHT----------------BCTTSHHHHH
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccccccccccc----------------ccchhhHHHH
Confidence 46789999999996 589999999999999999999999875322222221110 0011122223
Q ss_pred HHHHHHHhhcCCEEEEEcCC-ccCHHHHHhCCeeEEe-CC-CCcHHHHhccCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDG-TNDAPALHEADIGLAM-GI-AGTEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg-~ND~~ml~~A~vgIam-g~-~~~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+++.+.-. .+.++++||+ .+|+.+-+.||+.... .. .........+|+++.+ ++.+.++|++
T Consensus 163 ~~~~~l~~~-p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~--l~el~~~l~~ 228 (230)
T d1x42a1 163 LALKKAGVK-GEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSD--LREVIKIVDE 228 (230)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESS--TTHHHHHHHH
T ss_pred HHHhhhccc-ccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECC--HHHHHHHHHH
Confidence 344444333 3679999998 6899999999986432 11 2233455678999866 8888887753
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.23 E-value=0.00013 Score=69.54 Aligned_cols=118 Identities=18% Similarity=0.182 Sum_probs=77.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|+++|+++.++|+... .+..+.+.+|+...-..++..++.. ..+..|+--.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~~i~~s~~~~----------------~~Kp~~~~~~ 144 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFTEILTSQSGF----------------VRKPSPEAAT 144 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEEEEECGGGCC----------------CCTTSSHHHH
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccccccccccccc----------------ccchhHHHHH
Confidence 3579999999999999999999999765 5567889999875322222221110 0112333344
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE-EeCCCCcHHHHhccCEEeccCChhHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL-AMGIAGTEVAKESADVIILDDNFSTIVTV 629 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI-amg~~~~~~ak~~ad~v~~~~~~~~i~~~ 629 (845)
.+++.+.-. .+.+++|||+.+|+.+-+.||+.. .+. .+. ..+|+.+.+ +..+.++
T Consensus 145 ~~~~~~~~~-p~~~l~VgD~~~Di~~A~~~G~~~i~v~-~~~----~~~~~~~~~--~~dl~~l 200 (204)
T d2go7a1 145 YLLDKYQLN-SDNTYYIGDRTLDVEFAQNSGIQSINFL-EST----YEGNHRIQA--LADISRI 200 (204)
T ss_dssp HHHHHHTCC-GGGEEEEESSHHHHHHHHHHTCEEEESS-CCS----CTTEEECSS--TTHHHHH
T ss_pred HHHHHhCCC-CceEEEEeCCHHHHHHHHHcCCeEEEEc-CCC----CCcCeecCC--HHHHHHH
Confidence 555555443 468999999999999999999854 344 332 235555533 5555544
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=97.05 E-value=0.00035 Score=68.39 Aligned_cols=118 Identities=16% Similarity=0.140 Sum_probs=79.7
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeC-cccccCCHHHHhhhcCCeeEEEEeChhc
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEG-PEFREKSDEELSKLIPKIQVMARSSPMD 564 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g-~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 564 (845)
-.+.|++.+.+++|+++|+++.++|+..........+.+|+..-....... ++. ...+..|+-
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~~d~~----------------~~~KP~p~~ 189 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTK----------------IGHKVESES 189 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECGG----------------GCCTTCHHH
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhcceeeccc----------------cccCCCcHH
Confidence 356899999999999999999999999999999999989875421110000 000 001222333
Q ss_pred HHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe----CCCCcHHHHhccCEEecc
Q 003127 565 KHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM----GIAGTEVAKESADVIILD 620 (845)
Q Consensus 565 K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam----g~~~~~~ak~~ad~v~~~ 620 (845)
=...++.+.-. .+.++|+||..+|+.+-++||+.... |+...+.....++.++.+
T Consensus 190 ~~~~~~~~~~~-p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~s 248 (253)
T d1zs9a1 190 YRKIADSIGCS-TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITS 248 (253)
T ss_dssp HHHHHHHHTSC-GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESS
T ss_pred HHHHHHHhCCC-cCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECC
Confidence 34455555444 47899999999999999999996654 433333445566777754
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=97.03 E-value=0.00012 Score=69.95 Aligned_cols=120 Identities=13% Similarity=0.225 Sum_probs=80.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.+.+++|+ +++++.++|+.....+....+.+|+...-..++.+++.. .....|+--.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~p~~~~ 144 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMAVTISADDTP----------------KRKPDPLPLL 144 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGGGSS----------------CCTTSSHHHH
T ss_pred ccccchhhhhhhhc-ccccccccccccccccccccccccccccccccccccccc----------------cchhhhhhhc
Confidence 35689999999997 479999999999999999999999875322232222211 0111233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEe---CCCCcHHHHhccCEEeccCChhHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAM---GIAGTEVAKESADVIILDDNFSTIV 627 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIam---g~~~~~~ak~~ad~v~~~~~~~~i~ 627 (845)
.+++.++-. .+.+++|||+.+|+.+-+.||+.... | ..+....+.+|+++.+ +..+.
T Consensus 145 ~~~~~~~~~-~~~~l~VgDs~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~~~~i~~--l~dll 204 (207)
T d2hdoa1 145 TALEKVNVA-PQNALFIGDSVSDEQTAQAANVDFGLAVWG-MDPNADHQKVAHRFQK--PLDIL 204 (207)
T ss_dssp HHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEEGGG-CCTTGGGSCCSEEESS--GGGGG
T ss_pred ccccceeee-ccceeEecCCHHHHHHHHHcCCeEEEEecC-CCChhHhhhcCcEeCC--HHHHH
Confidence 455544433 36788999999999999999998664 3 2223334567888743 55443
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.02 E-value=0.00067 Score=63.49 Aligned_cols=109 Identities=15% Similarity=0.065 Sum_probs=72.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++++.+++|++.|+++.++|+.+.... ...+.+|+...-..++.+++... ....|+--.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~~~~~----------------~KP~p~~~~ 141 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSSSGFK----------------RKPNPESML 141 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGGGCCC----------------CTTSCHHHH
T ss_pred cccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccccccc----------------cCCCHHHHH
Confidence 4578999999999999999999999876554 56788888753222332222110 011222223
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCCCCcHHHHhccCE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADV 616 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~~~~~~ak~~ad~ 616 (845)
.+.+.+. .+.++++||+.+|+.+-+.||+-...= ++.+..++..|+
T Consensus 142 ~~~~~~~---~~~~l~vgDs~~Di~aA~~aG~~~i~v-~~~~~~~~~~d~ 187 (187)
T d2fi1a1 142 YLREKYQ---ISSGLVIGDRPIDIEAGQAAGLDTHLF-TSIVNLRQVLDI 187 (187)
T ss_dssp HHHHHTT---CSSEEEEESSHHHHHHHHHTTCEEEEC-SCHHHHHHHHTC
T ss_pred HHHHHcC---CCCeEEEeCCHHHHHHHHHcCCEEEEE-CCCCChHhhcCC
Confidence 3333332 245889999999999999999985543 566666666553
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.95 E-value=0.00085 Score=61.38 Aligned_cols=90 Identities=10% Similarity=0.006 Sum_probs=62.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCH-HHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh--h
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNI-NTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP--M 563 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~-~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p--~ 563 (845)
++.|++.++++.|+++|+++.++|+.+. ..+....+..++...... +.....| +
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~-----------------------~~~~~kp~~~ 102 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQ-----------------------REIYPGSKVT 102 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSE-----------------------EEESSSCHHH
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhccccccccee-----------------------eecccCCChH
Confidence 5789999999999999999999997654 556667777776532111 2222222 2
Q ss_pred cHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 564 DKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 564 ~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
.-..+.+.+.-. .+.++++||..+|+.+-++||+-.
T Consensus 103 ~~~~~~~~~~~~-~~~~l~igD~~~di~aA~~aG~~~ 138 (164)
T d1u7pa_ 103 HFERLHHKTGVP-FSQMVFFDDENRNIIDVGRLGVTC 138 (164)
T ss_dssp HHHHHHHHHCCC-GGGEEEEESCHHHHHHHHTTTCEE
T ss_pred HHHHHHHHhCCC-hHHEEEEcCCHHHHHHHHHcCCEE
Confidence 223333333333 368899999999999999999844
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.95 E-value=0.0012 Score=59.08 Aligned_cols=100 Identities=14% Similarity=0.144 Sum_probs=62.1
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhh--cCCeeEEE----
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKL--IPKIQVMA---- 558 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~--~~~~~v~~---- 558 (845)
++++.|++.+.++.|+++|++++++|||+......+.+.++... ...... ......+.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~----------------~~~~~~~~~~~~~~~~~~~~ 97 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTR----------------KWVEDIAGVPLVMQCQREQG 97 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHH----------------HHHHHTTCCCCSEEEECCTT
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHh----------------hhhhhcCCCcEEEeeccccc
Confidence 57889999999999999999999999998422111111110000 000000 00011121
Q ss_pred --EeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 559 --RSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 559 --~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
|..+.-|..+.+.+.....+.++++||...|+.|.+.+|+-.
T Consensus 98 ~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~ 141 (149)
T d1ltqa1 98 DTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVEC 141 (149)
T ss_dssp CCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCE
T ss_pred ccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcE
Confidence 122356777777776653456788999999999999999864
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.90 E-value=0.00019 Score=71.18 Aligned_cols=39 Identities=15% Similarity=0.197 Sum_probs=30.7
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC 524 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l 524 (845)
++.-+++.++|++|+++|++++++|++...+...+++++
T Consensus 17 ~~~i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 17 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 333488999999999999999999987766666665543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=96.74 E-value=0.0019 Score=63.90 Aligned_cols=46 Identities=15% Similarity=0.158 Sum_probs=35.3
Q ss_pred cCCCChhHHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccCC
Q 003127 485 KDPMRPGVKESVAICRSAGITVRMVTG---DNINTAKAIARECGILTDN 530 (845)
Q Consensus 485 ~d~l~~~~~~~I~~l~~~Gi~v~~~TG---d~~~ta~~ia~~lgi~~~~ 530 (845)
.+++-+++.+++++|+++|++++++|+ ++........+++|+....
T Consensus 21 ~~~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~ 69 (261)
T d1vjra_ 21 DDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPD 69 (261)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCG
T ss_pred CCccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccccc
Confidence 344458999999999999999999984 5566666667778876443
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.60 E-value=0.0039 Score=60.67 Aligned_cols=126 Identities=12% Similarity=0.097 Sum_probs=82.1
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.|++.++++.|+ .|++++++|+.+........+.+|+...-..++.+.+.. ..+.+|+-=.
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s~~~~----------------~~KP~p~~~~ 171 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGGEQK----------------EEKPAPSIFY 171 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGGGSS----------------SCTTCHHHHH
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccccccccccc----------------cchhhhhhHH
Confidence 36799999999998 589999999999999999999999875332333222211 0011122113
Q ss_pred HHHHHHHhhcCCEEEEEcCCc-cCHHHHHhCCee-EEeCC-CC--cHHHHhccCEEeccCChhHHHHHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGT-NDAPALHEADIG-LAMGI-AG--TEVAKESADVIILDDNFSTIVTVAKW 632 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~-ND~~ml~~A~vg-Iamg~-~~--~~~ak~~ad~v~~~~~~~~i~~~i~~ 632 (845)
.+++.+.-. .+.++++||.. +|+.+-+.||+. +..-. .+ .+.....+|+++.+ +..+.++|+.
T Consensus 172 ~~~~~~~~~-~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~--l~eL~~ll~~ 239 (247)
T d2gfha1 172 HCCDLLGVQ-PGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSS--VLELPALLQS 239 (247)
T ss_dssp HHHHHHTCC-GGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESS--GGGHHHHHHH
T ss_pred HHHHHhhcC-HHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECC--HHHHHHHHHH
Confidence 344444333 35788999995 899999999996 43210 11 11233457898865 7778777753
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=96.44 E-value=0.00058 Score=67.36 Aligned_cols=50 Identities=12% Similarity=0.140 Sum_probs=37.5
Q ss_pred EeeecCCCChhHHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHHcCCccCC
Q 003127 481 IVGIKDPMRPGVKESVAICRSAGITVRMVT---GDNINTAKAIARECGILTDN 530 (845)
Q Consensus 481 ~~~~~d~l~~~~~~~I~~l~~~Gi~v~~~T---Gd~~~ta~~ia~~lgi~~~~ 530 (845)
++.-.+++=+++.++|+.|+++|++++++| ++.........+++|+..+.
T Consensus 13 TL~~~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~ 65 (250)
T d2c4na1 13 VLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPD 65 (250)
T ss_dssp TTEETTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCG
T ss_pred eeEECCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccc
Confidence 333344445789999999999999999998 56667777767788886543
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=96.41 E-value=0.0017 Score=62.06 Aligned_cols=123 Identities=9% Similarity=0.046 Sum_probs=85.6
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
.+.+++.++++.+++.|+++.++|+-.........+..++...-..++...+... .+.+|+-=.
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s~~~~~----------------~KP~p~~~~ 156 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVDPVQV----------------YKPDNRVYE 156 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESGGGTC----------------CTTSHHHHH
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeeeeeeec----------------cccHHHHHH
Confidence 3568899999999999999999999999999999999888765444443333210 112233334
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeEEeCC---CCcHHHHhccCEEeccCChhHHHH
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGLAMGI---AGTEVAKESADVIILDDNFSTIVT 628 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgIamg~---~~~~~ak~~ad~v~~~~~~~~i~~ 628 (845)
.+++.+.-. .+.++++||..+|+.+-+.||+-.+.-+ ...+.....+|+++.+ +..+.+
T Consensus 157 ~~~~~~g~~-p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~--l~el~~ 218 (220)
T d1zrna_ 157 LAEQALGLD-RSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTS--LRAVVE 218 (220)
T ss_dssp HHHHHHTSC-GGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESS--HHHHHT
T ss_pred HHHHHhCCC-CceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECC--HHHHHh
Confidence 455555444 4689999999999999999998855321 1222344568998854 766654
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=96.32 E-value=0.0019 Score=61.89 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=74.1
Q ss_pred CCCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 486 DPMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 486 d~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.++-|++.+.++.|++.|+++.++|+... +....+..|+...-..++.+++.. ..+..|+-=
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~~i~~~~~~~----------------~~KP~~~~~ 151 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFDAIADPAEVA----------------ASKPAPDIF 151 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCSEECCTTTSS----------------SCTTSTHHH
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccccccccccccccc----------------ccccChHHH
Confidence 45678999999999999999999999865 567888889876444444433321 011122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeCCCCcHHHHhccCEEecc
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~ak~~ad~v~~~ 620 (845)
..+.+.+.-. .+.++++||+.+|+.+-+.||+ .|.++ ++ .....++.++.+
T Consensus 152 ~~~l~~~~i~-~~~~l~VgD~~~di~~A~~aG~~~i~v~-~~--~~~~~~~~~~~~ 203 (221)
T d1o08a_ 152 IAAAHAVGVA-PSESIGLEDSQAGIQAIKDSGALPIGVG-RP--EDLGDDIVIVPD 203 (221)
T ss_dssp HHHHHHTTCC-GGGEEEEESSHHHHHHHHHHTCEEEEES-CH--HHHCSSSEEESS
T ss_pred HHHHHHcCCC-CceEEEEecCHHHHHHHHHcCCEEEEEC-Ch--hhcccccEEcCC
Confidence 3344444333 3678999999999999999997 44444 32 223445665543
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=96.19 E-value=0.0037 Score=59.35 Aligned_cols=135 Identities=19% Similarity=0.180 Sum_probs=67.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC--------HH-------HHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN--------IN-------TAKAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~--------~~-------ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++-|++.+++++|+++|++++++|..+ .. ......++.|+... .+........... ...
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~----~~~ 121 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD--MVLACAYHEAGVG----PLA 121 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS--EEEEECCCTTCCS----TTC
T ss_pred EecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccccc--eEEEecccccccc----ccc
Confidence 467999999999999999999999532 11 12222333343211 0000000000000 000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeCCCCcHHHHhccCEEecc-CChhHHHHH
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEVAKESADVIILD-DNFSTIVTV 629 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~ak~~ad~v~~~-~~~~~i~~~ 629 (845)
.+-..+..-+|.--.++++.+.-. .+.+.||||..+|+.+-+.||+ +|.+. .|... ...+....+ .+...+.++
T Consensus 122 ~~~~~~rKP~p~ml~~a~~~~~i~-~~~~~~VGD~~~Di~aA~~AGi~~i~v~-~g~~~--~~~~~~~~~~~~~~e~~dl 197 (209)
T d2o2xa1 122 IPDHPMRKPNPGMLVEAGKRLALD-LQRSLIVGDKLADMQAGKRAGLAQGWLV-DGEAA--VQPGFAIRPLRDSSELGDL 197 (209)
T ss_dssp CSSCTTSTTSCHHHHHHHHHHTCC-GGGCEEEESSHHHHHHHHHTTCSEEEEE-TCCCE--EETTEEEEEESSHHHHHHH
T ss_pred ccccccccccchhhhHhHHHhCCC-ccceEEeCCCHHHHHHHHHCCCcEEEEe-CCCCc--ccCCccccCccchhHHHHH
Confidence 000000011222233444444433 3678999999999999999998 55554 33322 112333322 334555555
Q ss_pred HH
Q 003127 630 AK 631 (845)
Q Consensus 630 i~ 631 (845)
+.
T Consensus 198 l~ 199 (209)
T d2o2xa1 198 LA 199 (209)
T ss_dssp HH
T ss_pred HH
Confidence 44
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.15 E-value=0.0081 Score=52.59 Aligned_cols=107 Identities=20% Similarity=0.322 Sum_probs=71.1
Q ss_pred cCCchHHHHHHHHHHcCCChHHhhhhcceEEEecCCCCCceEEEEEEcCCCeEEEEEeCcHHHHHHhchhccccCCceec
Q 003127 351 LGTPTETAILEFGLLLGGDFQAERQASKIVKVEPFNSVKKQMGVVIELPEGGFRVHCKGASEIILAACDKFLNSNGEVVP 430 (845)
Q Consensus 351 ~~~p~e~al~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~~sviv~~~~~~~~~~~kGa~~~il~~~~~~~~~~~~~~~ 430 (845)
+.||..+|++++|++.+..... ...+.-....||....+..++.+. + ..+..|++..+...... .+..
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~---g--~~v~~G~~~~~~~~~~~----~g~~-- 96 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRER-DVQSLHATFVPFTAQSRMSGINID---N--RMIRKGSVDAIRRHVEA----NGGH-- 96 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCC-CTTTTTCEEEEEETTTTEEEEEET---T--EEEEEECHHHHHHHHHH----HTCC--
T ss_pred CCchHHHHHHHHHHHhcCCCcc-ccccccccccccccccceEEEEEC---C--EEEEecHHHHHHHHHHH----cCCC--
Confidence 6799999999999887543221 112233345677766665555432 2 34567998777554321 1211
Q ss_pred CCHHHHHHHHHHHHHHHHhhchhhhheeeecCCCCCCCCCCCCCceEEEEEeeecCCCC
Q 003127 431 LNEAAVNHLNETIEKFASEALRTLCLACMEIGNEFSADAPIPTEGYTCIGIVGIKDPMR 489 (845)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~G~r~l~~a~~~i~~~~~~~~~~~e~~~~~lG~~~~~d~l~ 489 (845)
++ ..+.+..+++..+|..++.+| .|.+++|++++.|+++
T Consensus 97 ~~----~~~~~~~~~~~~~G~Tvv~Va----------------~d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 97 FP----TDVDQKVDQVARQGATPLVVV----------------EGSRVLGVIALKDIVK 135 (136)
T ss_dssp CC----HHHHHHHHHHHHTTSEEEEEE----------------ETTEEEEEEEEEESSC
T ss_pred Cc----HHHHHHHHHHHHCCCeEEEEE----------------ECCEEEEEEEEEeecC
Confidence 12 346778899999999998888 3568999999999986
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=95.86 E-value=0.0053 Score=60.22 Aligned_cols=53 Identities=21% Similarity=0.245 Sum_probs=35.6
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcc-CHHHHHhCCe-eEEeCCCC---cHHHHhc---cCEEecc
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTN-DAPALHEADI-GLAMGIAG---TEVAKES---ADVIILD 620 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~N-D~~ml~~A~v-gIamg~~~---~~~ak~~---ad~v~~~ 620 (845)
..+++.++.. .+.++||||+.+ |+.+-++||+ +|.+. +| .+..++. +|+++.+
T Consensus 187 ~~al~~l~i~-~~~~~mIGDs~~~DI~gA~~aG~~si~V~-~G~~~~~~~~~~~~~PD~vi~s 247 (253)
T d1wvia_ 187 NKALDRLGVK-RHEAIMVGDNYLTDITAGIKNDIATLLVT-TGFTKPEEVPALPIQPDFVLSS 247 (253)
T ss_dssp HHHHHHHTSC-GGGEEEEESCTTTTHHHHHHTTCEEEEES-SSSSCTTTGGGCSSCCSEEESC
T ss_pred eehhhhcccc-ccceEEEcCChHHHHHHHHHCCCCEEEEC-CCCCCHHHHhhcCCCCCEEECC
Confidence 4455555444 478999999965 9999999999 66664 32 2233333 4898854
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.74 E-value=0.013 Score=54.80 Aligned_cols=139 Identities=19% Similarity=0.281 Sum_probs=91.7
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccC--------------------CHHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREK--------------------SDEE 546 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~--------------------~~~~ 546 (845)
.+-|++.++++.+++. ...+++|---.+-++++++.+|+..+ ..-+.-+++.. +.++
T Consensus 81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp~e--~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~ee 157 (308)
T d1y8aa1 81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVRGE--LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGEE 157 (308)
T ss_dssp CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCCSE--EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHHH
T ss_pred eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCCce--eecccccccccCCChHHHHHHHHHhhhccCccHHH
Confidence 3578999999999877 67788888888889999999999521 22222222211 1112
Q ss_pred Hhhh----c---------CCeeEEEEeChhcHHHHHHHHHhhcC-CEEEEEcCCccCHHHHHhCCe--eEEeCCCCcHHH
Q 003127 547 LSKL----I---------PKIQVMARSSPMDKHTLVKHLRTTLG-EVVAVTGDGTNDAPALHEADI--GLAMGIAGTEVA 610 (845)
Q Consensus 547 ~~~~----~---------~~~~v~~~~~p~~K~~~v~~l~~~~g-~~v~~~GDg~ND~~ml~~A~v--gIamg~~~~~~a 610 (845)
+.+. + .++... -...|.++++......+ ...+.+||+..|++||+.|.= |+|+.-||.+-+
T Consensus 158 l~e~~d~~f~~~e~~~i~e~Vk~V---Ggg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Ya 234 (308)
T d1y8aa1 158 LFRKLDELFSRSEVRKIVESVKAV---GAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEYA 234 (308)
T ss_dssp HHHHHHHHHHSHHHHHHHHTCBCC---CHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHHH
T ss_pred HHHHHHHHhccchHhhHHhhhccc---CCchhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCcccc
Confidence 2111 1 111111 12457777776655434 345788999999999997732 555556899999
Q ss_pred HhccCEEeccCChhHHHHHHH
Q 003127 611 KESADVIILDDNFSTIVTVAK 631 (845)
Q Consensus 611 k~~ad~v~~~~~~~~i~~~i~ 631 (845)
-..||+.+.+.+...+..++.
T Consensus 235 l~eA~VaiiS~~~~a~~~i~d 255 (308)
T d1y8aa1 235 LKHADVVIISPTAMSEAKVIE 255 (308)
T ss_dssp HTTCSEEEECSSTHHHHHHHH
T ss_pred ccccceEEeccchhHHHHHHH
Confidence 999999999888777666554
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=95.58 E-value=0.0049 Score=57.52 Aligned_cols=88 Identities=18% Similarity=0.283 Sum_probs=62.1
Q ss_pred CChhHHHHHHHHHHcCCEEEEEcCCCH----HHHHHHHHHcCCccCC--ceeeeCcccccCCHHHHhhhcCCeeEEEEeC
Q 003127 488 MRPGVKESVAICRSAGITVRMVTGDNI----NTAKAIARECGILTDN--GIAIEGPEFREKSDEELSKLIPKIQVMARSS 561 (845)
Q Consensus 488 l~~~~~~~I~~l~~~Gi~v~~~TGd~~----~ta~~ia~~lgi~~~~--~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~ 561 (845)
+.+++++.++.+++.|++++.+|||.. .|++++.+.+|+...+ ...+.+.+ ..
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~---------------------~~ 145 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK---------------------PG 145 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC---------------------TT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC---------------------CC
Confidence 457999999999999999999999963 4677777778986432 11111111 12
Q ss_pred hhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEE
Q 003127 562 PMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLA 601 (845)
Q Consensus 562 p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIa 601 (845)
...|...++. -+.++++||..+|..+-+.||+ +|-
T Consensus 146 K~~rr~~Ik~-----y~I~l~~GD~l~Df~aA~eagi~~iR 181 (209)
T d2b82a1 146 QNTKSQWLQD-----KNIRIFYGDSDNDITAARDVGARGIR 181 (209)
T ss_dssp CCCSHHHHHH-----TTEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred chHHHHHHHH-----cCeEEEecCCHHHHhHHHHcCCCceE
Confidence 2445555543 2588999999999999999984 443
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.19 E-value=0.0068 Score=57.68 Aligned_cols=105 Identities=12% Similarity=0.150 Sum_probs=67.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN----INTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~----~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++.+++.+.+++|+++|+++.++|+.. ...........|+...-..++.+++.. .....|
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~~~~----------------~~KP~p 160 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVG----------------MIKPEP 160 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHHHHS----------------CCTTCH
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehhhcc----------------CCCCCh
Confidence 367999999999999999999999643 334444455566543222232222111 011234
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeCCCCcHH
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMGIAGTEV 609 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg~~~~~~ 609 (845)
+--...++.++-. .+.++|+||..+|+.+-+.||+ +|-+. ++.+.
T Consensus 161 ~~~~~~~~~~~v~-p~~~l~IgD~~~Di~~A~~aG~~ti~V~-~~~~~ 206 (222)
T d1cr6a1 161 QIYNFLLDTLKAK-PNEVVFLDDFGSNLKPARDMGMVTILVH-NTASA 206 (222)
T ss_dssp HHHHHHHHHHTSC-TTSEEEEESSSTTTHHHHHHTCEEEECC-SSSHH
T ss_pred HHHHHHHHHhCCC-cceEEEEECCHHHHHHHHHcCCEEEEEC-CcchH
Confidence 4445566666555 5778999999999999999997 44444 44443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=94.91 E-value=0.0043 Score=56.20 Aligned_cols=100 Identities=16% Similarity=0.116 Sum_probs=54.3
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCC--------HHHH-------HHHHHHcCCccCCceeeeCcccccCCHHHHhhhc
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDN--------INTA-------KAIARECGILTDNGIAIEGPEFREKSDEELSKLI 551 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~--------~~ta-------~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~ 551 (845)
++-|++.+++++|+++|++++++|..+ .... .......|+... ...++...-...
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~i~~~~~~~~~~--------- 99 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQFD-EVLICPHLPADE--------- 99 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCCEE-EEEEECCCGGGC---------
T ss_pred eECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccccc-eeeecccccccc---------
Confidence 467899999999999999999999753 1111 222233333210 000100000000
Q ss_pred CCeeEEEEeChhcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 552 PKIQVMARSSPMDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 552 ~~~~v~~~~~p~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
.-+....|.-=.++++.+.-. .+.+.||||...|+.|-+.||+--
T Consensus 100 ---~~~~KP~p~~~~~~~~~~~id-~~~~~~IGD~~~Di~aA~~aG~~~ 144 (161)
T d2fpwa1 100 ---CDCRKPKVKLVERYLAEQAMD-RANSYVIGDRATDIQLAENMGING 144 (161)
T ss_dssp ---CSSSTTSSGGGGGGC----CC-GGGCEEEESSHHHHHHHHHHTSEE
T ss_pred ---ccccccccHHHHHHHHhcCCC-hhcEEEECCCHHHHHHHHHcCCeE
Confidence 000011222223444444433 367899999999999999999864
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=94.24 E-value=0.052 Score=51.97 Aligned_cols=95 Identities=12% Similarity=0.094 Sum_probs=67.5
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeChhcHH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSPMDKH 566 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 566 (845)
++.+++.+++++|+ |+++.++|..+...+....+..|+...-..++.+++... .+..|+-=.
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~~~~~----------------~KP~p~~f~ 154 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVDAKRV----------------FKPHPDSYA 154 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGGGGTC----------------CTTSHHHHH
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccccccc----------------cCccHHHHH
Confidence 45688899999885 789999999999999999999998765444444433211 112233224
Q ss_pred HHHHHHHhhcCCEEEEEcCCccCHHHHHhCCeeE
Q 003127 567 TLVKHLRTTLGEVVAVTGDGTNDAPALHEADIGL 600 (845)
Q Consensus 567 ~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vgI 600 (845)
.+++.+.-+ .+.+++|||+.+|+.+=+.||+.-
T Consensus 155 ~a~~~lg~~-p~e~l~VgD~~~di~~A~~aG~~t 187 (245)
T d1qq5a_ 155 LVEEVLGVT-PAEVLFVSSNGFDVGGAKNFGFSV 187 (245)
T ss_dssp HHHHHHCCC-GGGEEEEESCHHHHHHHHHHTCEE
T ss_pred HHHHHhCCC-hhhEEEEeCCHHHHHHHHHcCCeE
Confidence 455555444 467999999999999999999753
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=94.08 E-value=0.024 Score=53.71 Aligned_cols=123 Identities=10% Similarity=0.115 Sum_probs=75.8
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCce-eeeCcccccCCHHHHhhhcCCeeEEEEeChhcH
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIARECGILTDNGI-AIEGPEFREKSDEELSKLIPKIQVMARSSPMDK 565 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~lgi~~~~~~-~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 565 (845)
.+.+++.+.+++++ .+..++|+.....+....+.+|+...... +..+++... -.++..|+.=
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~~~~~--------------~~~KP~~~~~ 147 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAKDLGA--------------DRVKPKPDIF 147 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHHHHCT--------------TCCTTSSHHH
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhcccccccccceeecccccccc--------------cccccCHHHH
Confidence 46778888887775 45679999999999999999999753211 111111000 0001122222
Q ss_pred HHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCee-EEeCCCCc-------HH-HHhccCEEeccCChhHHHHHH
Q 003127 566 HTLVKHLRTTLGEVVAVTGDGTNDAPALHEADIG-LAMGIAGT-------EV-AKESADVIILDDNFSTIVTVA 630 (845)
Q Consensus 566 ~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~vg-Iamg~~~~-------~~-ak~~ad~v~~~~~~~~i~~~i 630 (845)
....+.+.-. .+.+++|||+.+|+.+-+.||+- |.+. ++. +. ....||+++.+ +..+..+|
T Consensus 148 ~~~~~~l~~~-p~~~l~vgDs~~dv~aA~~aG~~~i~v~-~~~~~~~~~~~~l~~~~ad~vi~~--l~eL~~ll 217 (222)
T d2fdra1 148 LHGAAQFGVS-PDRVVVVEDSVHGIHGARAAGMRVIGFT-GASHTYPSHADRLTDAGAETVISR--MQDLPAVI 217 (222)
T ss_dssp HHHHHHHTCC-GGGEEEEESSHHHHHHHHHTTCEEEEEC-CSTTCCTTHHHHHHHHTCSEEESC--GGGHHHHH
T ss_pred HHHHHhhCCC-CceEEEEcCCHHHHHHHHHcCCEEEEEc-cCCCCCcchHHHHHhCCCCEEECC--HHHHHHHH
Confidence 3444444433 46899999999999999999974 3333 222 11 23349999966 66666655
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.65 E-value=0.031 Score=52.59 Aligned_cols=100 Identities=13% Similarity=0.187 Sum_probs=59.4
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHH----HHHHHcCCccCCceeeeCcccccCCHHHHhhhcCCeeEEEEeCh
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAK----AIARECGILTDNGIAIEGPEFREKSDEELSKLIPKIQVMARSSP 562 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~----~ia~~lgi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~~~p 562 (845)
++.+++.+.+++|+++|++++++|........ ......++...-..++.+++.. ....+|
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s~~~~----------------~~KP~~ 162 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVG----------------MVKPEP 162 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHT----------------CCTTCH
T ss_pred CCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEeccccc----------------cchhHH
Confidence 36789999999999999999999976433222 2222233322111222111100 001122
Q ss_pred hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC
Q 003127 563 MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG 603 (845)
Q Consensus 563 ~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg 603 (845)
+-=..+++.+... .+.+++|||...|+.+-++||+ +|.+.
T Consensus 163 ~~~~~~~~~~~~~-p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 163 QIYKFLLDTLKAS-PSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp HHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred HHHHHHhhhcccC-ccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 2224444444433 3678899999999999999999 55453
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=89.43 E-value=0.011 Score=54.49 Aligned_cols=93 Identities=13% Similarity=0.135 Sum_probs=57.2
Q ss_pred CCChhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-CCccCCceeeeCcccccCCHHHHhhhcCCeeEEEE-----e
Q 003127 487 PMRPGVKESVAICRSAGITVRMVTGDNINTAKAIAREC-GILTDNGIAIEGPEFREKSDEELSKLIPKIQVMAR-----S 560 (845)
Q Consensus 487 ~l~~~~~~~I~~l~~~Gi~v~~~TGd~~~ta~~ia~~l-gi~~~~~~~i~g~~~~~~~~~~~~~~~~~~~v~~~-----~ 560 (845)
++.+++.+.++.+++.|+++.++|+.+...+....... |+. ..+.. +++. .
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~---------------------~~fd~--v~~s~~~~~~ 140 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIR---------------------DAADH--IYLSQDLGMR 140 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHH---------------------HHCSE--EEEHHHHTCC
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccch---------------------hhccc--eeeccccccc
Confidence 46789999999999999999999987654332222211 111 11111 2211 1
Q ss_pred Ch--hcHHHHHHHHHhhcCCEEEEEcCCccCHHHHHhCCe-eEEeC
Q 003127 561 SP--MDKHTLVKHLRTTLGEVVAVTGDGTNDAPALHEADI-GLAMG 603 (845)
Q Consensus 561 ~p--~~K~~~v~~l~~~~g~~v~~~GDg~ND~~ml~~A~v-gIamg 603 (845)
.| +-=..+++.+.-. .+.++++||+.+|+.+-+.||+ +|.+.
T Consensus 141 Kp~~~~~~~~~~~~~~~-~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 141 KPEARIYQHVLQAEGFS-PSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp TTCHHHHHHHHHHHTCC-GGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred ccchHHHHHHHHhcCCC-CCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 12 2223333443333 3679999999999999999997 55554
|