Citrus Sinensis ID: 003210

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------84
MIDSSNHLVYAHSDSFNGQNMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI
ccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEEcccccccccHHHcccccccccccccccccEEEEEEcccEEEEEEcccccccccccEEEEEEccccccEEEEEEEccccccccEEEEEEEEccccccccEEEEEEEcccccccccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcHHHHHHHHHHHHHcccEEEEEEEccccccEEEcccccccccHHHHHHHHHHccccEEEEEEEcccccccccccccccccccccHHHHHHHcccccEEEEcccccccccccccccccccEEccccEEEEEccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccHHHHHHcccccccccccccHHHHHHHHHHHccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccccccccccccccccccccccccHHHHHcccccEEEEEcccEEEEcccEEEEcccccccccccccccccEEEEccccccccccccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccccccccEEEEccEEEccccccccccccccccccccccccccccccccccc
cccccccccccccccccccccEEEEcccccHcEEEEcccEEEEEEEcccccccHHHHHHHHHHHccccccccccccEEEEEccccEEEEEEEEcccccccccEEEEEEEEccccEEEEEEEcccccccEEEEEEEEEHHHHcccccccccEEEEcccccccccccEEEEEEEEEEccccccHccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHccEEEEEccEEccEEEEEEcccccccccHHHHHHHHHHcccEEEEEEEccccccccccEccccccccccHHHHHHHccccEEEEEccccccccccEEEEEEEEEEEEcccEEEEEEccccccccEEEEEEcccEcccccccccccccccccccccccccccccccccccccccccccccEEEcccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHccEEEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHEEEEEEcccccccccccccccccccccccHHHHHHHHcEEEEEEEccEEEEccEEEEEEEccccccccccccccHEEEEEEcccHccccccccccccEHHHHHHHHHHHHcccHHHHcccccHHHHHHHHHHHHHHHHHHHcccHccccccEEEEEEEEccccEEccccccccccccccEEEcccccccccccc
midssnhlvyahsdsfngqnmqivpstkGSLKVLLLHGNLDIWIysaknlpnmdmFHKTLGGmfnsqmntkitsdpyVTIAVAGAVVGRTfvisnsedpvwqqhfyvpvahsaaeVHFFVKdsdvvgseligtvaipveqiysggkvegtypvlngsgkpckpgatltlsiqytpmerlsfyhrgvgegpdyngvpgtyfplrkggkvtlyqdahvpdgclphlgldrgmsyvhgkCWYDICNAISQAQRLIYITGWSVWHKVKlvrdaspaldcTLGELLRSKSQEGVRVLLLVwddptsrsilgykmdgvmqthdeetRRVFKHSSVKvllcpriagkrhswakqkevgtiytHHQKTVIvdadagynrRKIIAFVGgldlcdgrydnphhplfrtlqtlhkddyhnptftgnttgcprepwhdlhskidgpaaYDVLTNFEERWrkaskphgikklksgdDALLRIeripgiigisdapsvrendaeSWHVQIFRsidstsvrgfpkdpkeatsknlvcgknVLIDMSIHTAYVKAIRSAQHFIYIENqyfigssynwssyrdlgannliPMEIALKIADKIRAHERFAAYIvipmwpegvptgaATQRILFWQHKTMQMMYETIYKALVEVglegafspqdylnffclgnrevidqtdtslsgnptapntpealsrksGRFMIYVHskgmivddeYVILGSAninqrsmegtrdteiamgayqpeytwarmkrhpygqiyGYRMSLWAEHLGyiedcfgqpetLECVRKVRSVGENNWQQFAADDQSEMRSHLIkypvevdrkgkvrpipgyetfpdvggniVGSFFAIQENLTI
MIDSSNHLVYAHsdsfngqnmQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGEllrsksqegVRVLLlvwddptsrsiLGYKMDGVMQTHDEetrrvfkhssvkvllcpriagkrhswakqkevgtiythhqktvivdadagyNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERwrkaskphgikklksgddaLLRIERIPgiigisdapsvRENDAESWHVQIFrsidstsvrgfpkdpkeatsknlvcgkNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQtdtslsgnptapntpealsrksGRFMIYVHSKGMIVDDEYVILGSAninqrsmegtrdtEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQfaaddqsemrSHLIKypvevdrkgkvrpipgyetfpdvggniVGSFFAIQENLTI
MIDSSNHLVYAHSDSFNGQNMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI
********************MQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKA*****IKKLKSGDDALLRIERIPGIIGISDAPSVR*NDAESWHVQIFRSID****************KNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVID************************RFMIYVHSKGMIVDDEYVILGSANINQR*****RDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAA*******SHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQ*****
*****************************SLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNG*********TLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFT****GCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPE**********ILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDT******TAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI
MIDSSNHLVYAHSDSFNGQNMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI
*******************NMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVI*QT******N**APNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQE*LT*
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MIDSSNHLVYAHSDSFNGQNMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSGDDALLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFAIQENLTI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query839 2.2.26 [Sep-21-2011]
P937331083 Phospholipase D beta 1 OS yes no 0.997 0.772 0.798 0.0
O23078927 Phospholipase D beta 2 OS no no 0.997 0.902 0.759 0.0
Q9T053858 Phospholipase D gamma 1 O no no 0.973 0.952 0.699 0.0
Q9T052866 Phospholipase D gamma 3 O no no 0.974 0.944 0.680 0.0
Q9T051856 Phospholipase D gamma 2 O no no 0.976 0.956 0.666 0.0
Q9C5Y0868 Phospholipase D delta OS= no no 0.958 0.926 0.532 0.0
Q43270812 Phospholipase D alpha 1 O N/A no 0.924 0.955 0.468 0.0
Q41142808 Phospholipase D alpha 1 O N/A no 0.923 0.959 0.456 0.0
P93400808 Phospholipase D alpha 1 O N/A no 0.918 0.954 0.454 0.0
O82549810 Phospholipase D alpha 1 O N/A no 0.924 0.958 0.454 0.0
>sp|P93733|PLDB1_ARATH Phospholipase D beta 1 OS=Arabidopsis thaliana GN=PLDBETA1 PE=2 SV=4 Back     alignment and function desciption
 Score = 1434 bits (3712), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 676/847 (79%), Positives = 757/847 (89%), Gaps = 10/847 (1%)

Query: 2    IDSSNHLVYAHSDSFNGQNMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLG 61
            +DSS+   YA ++S +  +MQ+    KGSLKVLLLHGNLDIWIY AKNLPNMDMFHKTLG
Sbjct: 238  VDSSSSY-YASTESPHSADMQMTLFGKGSLKVLLLHGNLDIWIYHAKNLPNMDMFHKTLG 296

Query: 62   GMF-------NSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAA 114
             MF         Q+ +KITSDPYV+++VAGAV+GRT+V+SNSE+PVW QHFYVPVAH AA
Sbjct: 297  DMFGRLPGKIEGQLTSKITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAHHAA 356

Query: 115  EVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYT 174
            EVHF VKDSDVVGS+LIG V IPVEQIYSG K+EGTYP+LN +GKPCKPGA L+LSIQYT
Sbjct: 357  EVHFVVKDSDVVGSQLIGLVTIPVEQIYSGAKIEGTYPILNSNGKPCKPGANLSLSIQYT 416

Query: 175  PMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVH 234
            PM++LS YH GVG GPDY GVPGTYFPLRKGG V LYQDAHVP+G LP + LD GMSY H
Sbjct: 417  PMDKLSVYHHGVGAGPDYQGVPGTYFPLRKGGTVRLYQDAHVPEGMLPGIRLDNGMSYEH 476

Query: 235  GKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDA-SPALDCTLGELLRSKSQEGVRVLL 293
            GKCW+D+ +AI QA+RLIYITGWSVWHKVKL+RD   PA +CTLGELLRSKSQEGVRVLL
Sbjct: 477  GKCWHDMFDAIRQARRLIYITGWSVWHKVKLIRDKLGPASECTLGELLRSKSQEGVRVLL 536

Query: 294  LVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTI 353
            L+WDDPTSRSILGYK DGVM THDEETRR FKHSSV+VLLCPR AGKRHSW KQ+EVGTI
Sbjct: 537  LIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRNAGKRHSWVKQREVGTI 596

Query: 354  YTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFT 413
            YTHHQK VIVDADAG NRRKIIAFVGGLDLCDGRYD P HPLFRTLQT+HKDD+HNPTFT
Sbjct: 597  YTHHQKNVIVDADAGGNRRKIIAFVGGLDLCDGRYDTPQHPLFRTLQTIHKDDFHNPTFT 656

Query: 414  GNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSG-DDALLRIERI 472
            GN +GCPREPWHDLHSKIDGPAAYDVLTNFEERW KA+KP GIKK K+  DDALLRI+RI
Sbjct: 657  GNLSGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPSGIKKFKTSYDDALLRIDRI 716

Query: 473  PGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSI 532
            P I+G+SD P+V END E+WHVQIFRSIDS SV+GFPKDPK+AT KNLVCGKNVLIDMSI
Sbjct: 717  PDILGVSDTPTVSENDPEAWHVQIFRSIDSNSVKGFPKDPKDATCKNLVCGKNVLIDMSI 776

Query: 533  HTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFA 592
            HTAYVKAIR+AQHFIYIENQYFIGSSYNW++++D+GANNLIPMEIALKIA+KIRA+ERFA
Sbjct: 777  HTAYVKAIRAAQHFIYIENQYFIGSSYNWNAHKDIGANNLIPMEIALKIAEKIRANERFA 836

Query: 593  AYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCL 652
            AYIVIPMWPEGVPTGAATQRIL+WQHKT+QMMYETIYKALVE GLEGAFSPQDYLNFFCL
Sbjct: 837  AYIVIPMWPEGVPTGAATQRILYWQHKTIQMMYETIYKALVETGLEGAFSPQDYLNFFCL 896

Query: 653  GNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRS 712
            GNRE++D  D S +G+P+  NTP+ALSRKS RFM+YVHSKGM+VDDEYV++GSANINQRS
Sbjct: 897  GNREMVDGIDNSGTGSPSNANTPQALSRKSRRFMVYVHSKGMVVDDEYVVIGSANINQRS 956

Query: 713  MEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVR 772
            MEGTRDTEIAMGAYQP++TWAR    P GQIYGYRMSLWAEH+  ++DCF QPE++ECVR
Sbjct: 957  MEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMATLDDCFTQPESIECVR 1016

Query: 773  KVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFA 832
            KVR++GE NW+QFAA++ S+MR HL+KYPVEVDRKGKVRP+PG ETFPDVGGNIVGSF A
Sbjct: 1017 KVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGSFIA 1076

Query: 833  IQENLTI 839
            IQENLTI
Sbjct: 1077 IQENLTI 1083
Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. Plays an important role in various cellular processes, including phytohormone action, vesicular trafficking, secretion, cytoskeletal arrangement, meiosis, tumor promotion, pathogenesis, membrane deterioration and senescence. Can use phosphatidylserine or N-acylphosphatidylethanolamine as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 4EC: .EC: 4
>sp|O23078|PLDB2_ARATH Phospholipase D beta 2 OS=Arabidopsis thaliana GN=PLDBETA2 PE=2 SV=3 Back     alignment and function description
>sp|Q9T053|PLDG1_ARATH Phospholipase D gamma 1 OS=Arabidopsis thaliana GN=PLDGAMMA1 PE=1 SV=1 Back     alignment and function description
>sp|Q9T052|PLDG3_ARATH Phospholipase D gamma 3 OS=Arabidopsis thaliana GN=PLDGAMMA3 PE=2 SV=1 Back     alignment and function description
>sp|Q9T051|PLDG2_ARATH Phospholipase D gamma 2 OS=Arabidopsis thaliana GN=PLDGAMMA2 PE=1 SV=3 Back     alignment and function description
>sp|Q9C5Y0|PLDD1_ARATH Phospholipase D delta OS=Arabidopsis thaliana GN=PLDDELTA PE=1 SV=2 Back     alignment and function description
>sp|Q43270|PLDA1_MAIZE Phospholipase D alpha 1 OS=Zea mays GN=PLD1 PE=2 SV=1 Back     alignment and function description
>sp|Q41142|PLDA1_RICCO Phospholipase D alpha 1 OS=Ricinus communis GN=PLD1 PE=1 SV=1 Back     alignment and function description
>sp|P93400|PLDA1_TOBAC Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2 Back     alignment and function description
>sp|O82549|PLDA1_BRAOC Phospholipase D alpha 1 OS=Brassica oleracea var. capitata GN=PLD1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query839
255541418 1114 phospholipase d beta, putative [Ricinus 0.996 0.750 0.825 0.0
30688872 1083 phospholipase D [Arabidopsis thaliana] g 0.997 0.772 0.798 0.0
297827869 1087 phospholipase D beta 1 [Arabidopsis lyra 0.998 0.770 0.797 0.0
20198318828 phospholipase D [Arabidopsis thaliana] 0.976 0.989 0.809 0.0
312283197 1048 unnamed protein product [Thellungiella h 0.997 0.798 0.795 0.0
225453861 1087 PREDICTED: phospholipase D beta 1 [Vitis 0.995 0.768 0.790 0.0
449454618 1095 PREDICTED: phospholipase D beta 1-like [ 0.977 0.748 0.797 0.0
15284211829 phospholipase D [Arabidopsis thaliana] 0.976 0.987 0.796 0.0
357507045 1114 Phospholipase D [Medicago truncatula] gi 0.985 0.742 0.793 0.0
224063951 1100 predicted protein [Populus trichocarpa] 0.998 0.761 0.767 0.0
>gi|255541418|ref|XP_002511773.1| phospholipase d beta, putative [Ricinus communis] gi|223548953|gb|EEF50442.1| phospholipase d beta, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1478 bits (3825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 709/859 (82%), Positives = 768/859 (89%), Gaps = 23/859 (2%)

Query: 2    IDSSNHL---VYAHSDSFN----GQNMQIVP--STKGSLKVLLLHGNLDIWIYSAKNLPN 52
            +DSS      +Y HS SF+     Q+ QIVP  +TKGSL+VLLLHGNLDI+IY AKNLPN
Sbjct: 258  VDSSGQYSAPLYTHSGSFSDSQHSQSTQIVPWQNTKGSLRVLLLHGNLDIYIYEAKNLPN 317

Query: 53   MDMFHKTLGGMFN-----------SQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVW 101
            MDMFHKTLG MFN            QM+ KITSDPYV+I+V GAV+GRTFVISNSEDPVW
Sbjct: 318  MDMFHKTLGDMFNRLPGNIGSKIEGQMSRKITSDPYVSISVVGAVIGRTFVISNSEDPVW 377

Query: 102  QQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPC 161
             QHFYVPVAH+AAEVHF VKDSDVVGS+LIG VAIPVEQIYSG +VEG YP+LN +GKPC
Sbjct: 378  MQHFYVPVAHNAAEVHFLVKDSDVVGSQLIGVVAIPVEQIYSGARVEGVYPILNSNGKPC 437

Query: 162  KPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCL 221
            KPGATL +SIQYTPME+LS YH+GVG GPDY GVPGTYFPLRKGG VTLYQDAHVPDGCL
Sbjct: 438  KPGATLKISIQYTPMEKLSIYHQGVGAGPDYYGVPGTYFPLRKGGTVTLYQDAHVPDGCL 497

Query: 222  PHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELL 281
            P+L LD G+SYVHGKCW+DI +AI  A+RLIYITGWSVWHKV+L+RDA P  D TLG+LL
Sbjct: 498  PNLKLDHGLSYVHGKCWHDIFDAIRHARRLIYITGWSVWHKVRLIRDADP--DVTLGDLL 555

Query: 282  RSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKR 341
            RSKSQEGVRVLLL+WDDPTSRSILGY+ DG+M THDEETRR FKHSSV+VLLCPRIAGKR
Sbjct: 556  RSKSQEGVRVLLLIWDDPTSRSILGYRTDGIMATHDEETRRFFKHSSVQVLLCPRIAGKR 615

Query: 342  HSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQT 401
            HSW KQ+EVGTIYTHHQKTVIVDADAG NRRKI+AFVGGLDLCDGRYD PHHPLFRTLQT
Sbjct: 616  HSWVKQREVGTIYTHHQKTVIVDADAGNNRRKIVAFVGGLDLCDGRYDAPHHPLFRTLQT 675

Query: 402  LHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLK- 460
            +HKDDYHNPTFTGN TGCPREPWHDLHSKIDGPAAYDVLTNFEERW KA++P GIKKLK 
Sbjct: 676  VHKDDYHNPTFTGNVTGCPREPWHDLHSKIDGPAAYDVLTNFEERWFKAARPQGIKKLKM 735

Query: 461  SGDDALLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNL 520
            S DDALLRIERIP I+G+ DAPSV END E WHVQIFRSIDS SV+GFPKDPKEATSKNL
Sbjct: 736  SYDDALLRIERIPDILGVFDAPSVGENDPEGWHVQIFRSIDSNSVKGFPKDPKEATSKNL 795

Query: 521  VCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALK 580
            VCGKNVLIDMSIHTAYVKAIR+AQHFIYIENQYFIGSSYNWSSY+DLGANNLIPMEIALK
Sbjct: 796  VCGKNVLIDMSIHTAYVKAIRAAQHFIYIENQYFIGSSYNWSSYKDLGANNLIPMEIALK 855

Query: 581  IADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGA 640
            IADKIRA+ERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLE A
Sbjct: 856  IADKIRANERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLENA 915

Query: 641  FSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEY 700
            FSPQDYLNFFCLGNRE  D  DTS   +PTA N P+ALSRKS RFMIYVHSKGMIVDDEY
Sbjct: 916  FSPQDYLNFFCLGNREFTDTCDTSAVSSPTAANNPQALSRKSRRFMIYVHSKGMIVDDEY 975

Query: 701  VILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIED 760
            VILGSANINQRSMEGTRDTEIAMGAYQP +TWAR + +PYGQI+GYRMSLWAEH+G IE 
Sbjct: 976  VILGSANINQRSMEGTRDTEIAMGAYQPHHTWARKQSNPYGQIHGYRMSLWAEHVGGIEG 1035

Query: 761  CFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFP 820
            CF QPE+LECVR++R++GE NW+QFAAD+ +EM+ HL+KYPVEVDRKGKVRPIPG ETFP
Sbjct: 1036 CFTQPESLECVRRIRTLGEMNWKQFAADEITEMKGHLLKYPVEVDRKGKVRPIPGCETFP 1095

Query: 821  DVGGNIVGSFFAIQENLTI 839
            DVGGNIVGSF AIQENLTI
Sbjct: 1096 DVGGNIVGSFLAIQENLTI 1114

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|30688872|ref|NP_565963.2| phospholipase D [Arabidopsis thaliana] gi|374095514|sp|P93733.4|PLDB1_ARATH RecName: Full=Phospholipase D beta 1; Short=AtPLDbeta1; Short=PLD beta 1; Short=PLDbeta gi|330254969|gb|AEC10063.1| phospholipase D [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297827869|ref|XP_002881817.1| phospholipase D beta 1 [Arabidopsis lyrata subsp. lyrata] gi|297327656|gb|EFH58076.1| phospholipase D beta 1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|20198318|gb|AAB63542.2| phospholipase D [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|312283197|dbj|BAJ34464.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|225453861|ref|XP_002272857.1| PREDICTED: phospholipase D beta 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449454618|ref|XP_004145051.1| PREDICTED: phospholipase D beta 1-like [Cucumis sativus] gi|449473835|ref|XP_004153996.1| PREDICTED: phospholipase D beta 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15284211|gb|AAC49656.2| phospholipase D [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|357507045|ref|XP_003623811.1| Phospholipase D [Medicago truncatula] gi|355498826|gb|AES80029.1| Phospholipase D [Medicago truncatula] Back     alignment and taxonomy information
>gi|224063951|ref|XP_002301317.1| predicted protein [Populus trichocarpa] gi|222843043|gb|EEE80590.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query839
TAIR|locus:20646071083 PLDBETA1 "phospholipase D beta 0.997 0.772 0.798 0.0
TAIR|locus:2126001927 PLDBETA2 "phospholipase D beta 0.997 0.902 0.761 0.0
TAIR|locus:2137045858 PLDGAMMA1 "phospholipase D gam 0.982 0.960 0.696 0.0
TAIR|locus:2137035866 PLDGAMMA3 "phospholipase D gam 0.984 0.953 0.676 0.0
TAIR|locus:2137025856 PLDGAMMA2 "phospholipase D gam 0.976 0.956 0.666 4e-312
TAIR|locus:2093227810 PLDALPHA1 "phospholipase D alp 0.924 0.958 0.449 1.3e-187
UNIPROTKB|P86387808 PLD1 "Phospholipase D alpha 1" 0.924 0.960 0.451 4.4e-187
TAIR|locus:2035211810 PLDALPHA2 "phospholipase D alp 0.924 0.958 0.453 2.8e-185
TAIR|locus:2145452820 PLDALPHA3 "phospholipase D alp 0.922 0.943 0.447 1.9e-177
TAIR|locus:2125314868 PLDDELTA "phospholipase D delt 0.601 0.581 0.565 4.6e-163
TAIR|locus:2064607 PLDBETA1 "phospholipase D beta 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3681 (1300.8 bits), Expect = 0., P = 0.
 Identities = 676/847 (79%), Positives = 757/847 (89%)

Query:     2 IDSSNHLVYAHSDSFNGQNMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLG 61
             +DSS+   YA ++S +  +MQ+    KGSLKVLLLHGNLDIWIY AKNLPNMDMFHKTLG
Sbjct:   238 VDSSSSY-YASTESPHSADMQMTLFGKGSLKVLLLHGNLDIWIYHAKNLPNMDMFHKTLG 296

Query:    62 GMFN-------SQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAA 114
              MF         Q+ +KITSDPYV+++VAGAV+GRT+V+SNSE+PVW QHFYVPVAH AA
Sbjct:   297 DMFGRLPGKIEGQLTSKITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAHHAA 356

Query:   115 EVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYT 174
             EVHF VKDSDVVGS+LIG V IPVEQIYSG K+EGTYP+LN +GKPCKPGA L+LSIQYT
Sbjct:   357 EVHFVVKDSDVVGSQLIGLVTIPVEQIYSGAKIEGTYPILNSNGKPCKPGANLSLSIQYT 416

Query:   175 PMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVH 234
             PM++LS YH GVG GPDY GVPGTYFPLRKGG V LYQDAHVP+G LP + LD GMSY H
Sbjct:   417 PMDKLSVYHHGVGAGPDYQGVPGTYFPLRKGGTVRLYQDAHVPEGMLPGIRLDNGMSYEH 476

Query:   235 GKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDA-SPALDCTLGELLRSKSQEGVRVLL 293
             GKCW+D+ +AI QA+RLIYITGWSVWHKVKL+RD   PA +CTLGELLRSKSQEGVRVLL
Sbjct:   477 GKCWHDMFDAIRQARRLIYITGWSVWHKVKLIRDKLGPASECTLGELLRSKSQEGVRVLL 536

Query:   294 LVWDDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTI 353
             L+WDDPTSRSILGYK DGVM THDEETRR FKHSSV+VLLCPR AGKRHSW KQ+EVGTI
Sbjct:   537 LIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRNAGKRHSWVKQREVGTI 596

Query:   354 YTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFT 413
             YTHHQK VIVDADAG NRRKIIAFVGGLDLCDGRYD P HPLFRTLQT+HKDD+HNPTFT
Sbjct:   597 YTHHQKNVIVDADAGGNRRKIIAFVGGLDLCDGRYDTPQHPLFRTLQTIHKDDFHNPTFT 656

Query:   414 GNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSG-DDALLRIERI 472
             GN +GCPREPWHDLHSKIDGPAAYDVLTNFEERW KA+KP GIKK K+  DDALLRI+RI
Sbjct:   657 GNLSGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPSGIKKFKTSYDDALLRIDRI 716

Query:   473 PGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSI 532
             P I+G+SD P+V END E+WHVQIFRSIDS SV+GFPKDPK+AT KNLVCGKNVLIDMSI
Sbjct:   717 PDILGVSDTPTVSENDPEAWHVQIFRSIDSNSVKGFPKDPKDATCKNLVCGKNVLIDMSI 776

Query:   533 HTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFA 592
             HTAYVKAIR+AQHFIYIENQYFIGSSYNW++++D+GANNLIPMEIALKIA+KIRA+ERFA
Sbjct:   777 HTAYVKAIRAAQHFIYIENQYFIGSSYNWNAHKDIGANNLIPMEIALKIAEKIRANERFA 836

Query:   593 AYIVIPMWPEGVPTGAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCL 652
             AYIVIPMWPEGVPTGAATQRIL+WQHKT+QMMYETIYKALVE GLEGAFSPQDYLNFFCL
Sbjct:   837 AYIVIPMWPEGVPTGAATQRILYWQHKTIQMMYETIYKALVETGLEGAFSPQDYLNFFCL 896

Query:   653 GNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRS 712
             GNRE++D  D S +G+P+  NTP+ALSRKS RFM+YVHSKGM+VDDEYV++GSANINQRS
Sbjct:   897 GNREMVDGIDNSGTGSPSNANTPQALSRKSRRFMVYVHSKGMVVDDEYVVIGSANINQRS 956

Query:   713 MEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPETLECVR 772
             MEGTRDTEIAMGAYQP++TWAR    P GQIYGYRMSLWAEH+  ++DCF QPE++ECVR
Sbjct:   957 MEGTRDTEIAMGAYQPQHTWARKHSGPRGQIYGYRMSLWAEHMATLDDCFTQPESIECVR 1016

Query:   773 KVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFFA 832
             KVR++GE NW+QFAA++ S+MR HL+KYPVEVDRKGKVRP+PG ETFPDVGGNIVGSF A
Sbjct:  1017 KVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGSFIA 1076

Query:   833 IQENLTI 839
             IQENLTI
Sbjct:  1077 IQENLTI 1083
GO:0003824 "catalytic activity" evidence=IEA
GO:0004630 "phospholipase D activity" evidence=ISS;IDA;TAS
GO:0005634 "nucleus" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009816 "defense response to bacterium, incompatible interaction" evidence=IEP
GO:0046686 "response to cadmium ion" evidence=IEP
GO:0005515 "protein binding" evidence=IPI
GO:0009506 "plasmodesma" evidence=IDA
GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding" evidence=IDA
TAIR|locus:2126001 PLDBETA2 "phospholipase D beta 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137045 PLDGAMMA1 "phospholipase D gamma 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137035 PLDGAMMA3 "phospholipase D gamma 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137025 PLDGAMMA2 "phospholipase D gamma 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2093227 PLDALPHA1 "phospholipase D alpha 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P86387 PLD1 "Phospholipase D alpha 1" [Carica papaya (taxid:3649)] Back     alignment and assigned GO terms
TAIR|locus:2035211 PLDALPHA2 "phospholipase D alpha 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145452 PLDALPHA3 "phospholipase D alpha 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2125314 PLDDELTA "phospholipase D delta" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O23078PLDB2_ARATH3, ., 1, ., 4, ., 40.75910.99760.9029nono
P93733PLDB1_ARATH3, ., 1, ., 4, ., 40.79810.99760.7728yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.4.40.991
3rd Layer3.1.40.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query839
PLN03008868 PLN03008, PLN03008, Phospholipase D delta 0.0
PLN02270808 PLN02270, PLN02270, phospholipase D alpha 0.0
PLN02352758 PLN02352, PLN02352, phospholipase D epsilon 0.0
cd09200211 cd09200, PLDc_pPLDbeta_2, Catalytic domain, repeat 1e-132
cd09142208 cd09142, PLDc_pPLD_like_2, Catalytic domain, repea 1e-118
cd09198180 cd09198, PLDc_pPLDbeta_1, Catalytic domain, repeat 1e-103
cd09139176 cd09139, PLDc_pPLD_like_1, Catalytic domain, repea 2e-85
cd09199211 cd09199, PLDc_pPLDalpha_2, Catalytic domain, repea 4e-81
cd04015158 cd04015, C2_plant_PLD, C2 domain present in plant 2e-64
cd09197178 cd09197, PLDc_pPLDalpha_1, Catalytic domain, repea 5e-62
cd09141183 cd09141, PLDc_vPLD1_2_yPLD_like_2, Catalytic domai 3e-47
cd09105146 cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, re 2e-40
pfam1235774 pfam12357, PLD_C, Phospholipase D C terminal 4e-37
PLN028661068 PLN02866, PLN02866, phospholipase D 1e-29
cd09844182 cd09844, PLDc_vPLD1_2, Catalytic domain, repeat 2, 2e-26
cd09104147 cd09104, PLDc_vPLD1_2_like_1, Catalytic domain, re 2e-25
cd09138146 cd09138, PLDc_vPLD1_2_yPLD_like_1, Catalytic domai 3e-25
cd09845182 cd09845, PLDc_vPLD2_2, Catalytic domain, repeat 2, 2e-23
PLN02866 1068 PLN02866, PLN02866, phospholipase D 5e-21
cd09143142 cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain 1e-18
smart00239101 smart00239, C2, Protein kinase C conserved region 4e-18
cd00030102 cd00030, C2, C2 domain 2e-16
pfam0016885 pfam00168, C2, C2 domain 2e-15
cd09140146 cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain 2e-14
COG1502438 COG1502, Cls, Phosphatidylserine/phosphatidylglyce 3e-14
cd09842151 cd09842, PLDc_vPLD1_1, Catalytic domain, repeat 1, 8e-14
cd09843145 cd09843, PLDc_vPLD2_1, Catalytic domain, repeat 1, 5e-13
cd04045120 cd04045, C2C_Tricalbin-like, C2 domain third repea 6e-12
cd08373127 cd08373, C2A_Ferlin, C2 domain first repeat in Fer 2e-10
cd08391121 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain fir 2e-09
cd04044124 cd04044, C2A_Tricalbin-like, C2 domain first repea 4e-09
cd04040115 cd04040, C2D_Tricalbin-like, C2 domain fourth repe 7e-09
cd00275128 cd00275, C2_PLC_like, C2 domain present in Phospho 1e-08
cd04024128 cd04024, C2A_Synaptotagmin-like, C2 domain first r 1e-08
COG50381227 COG5038, COG5038, Ca2+-dependent lipid-binding pro 1e-07
cd04036119 cd04036, C2_cPLA2, C2 domain present in cytosolic 4e-07
smart0015528 smart00155, PLDc, Phospholipase D 1e-06
cd04009133 cd04009, C2B_Munc13-like, C2 domain second repeat 4e-06
cd04050105 cd04050, C2B_Synaptotagmin-like, C2 domain second 9e-06
cd04047110 cd04047, C2B_Copine, C2 domain second repeat in Co 1e-05
cd08383117 cd08383, C2A_RasGAP, C2 domain (first repeat) of R 1e-05
pfam0061428 pfam00614, PLDc, Phospholipase D Active site motif 2e-05
cd09128142 cd09128, PLDc_unchar1_2, Putative catalytic domain 2e-05
pfam13091129 pfam13091, PLDc_2, PLD-like domain 6e-05
cd04054121 cd04054, C2A_Rasal1_RasA4, C2 domain first repeat 6e-05
cd09112174 cd09112, PLDc_CLS_2, catalytic domain repeat 2 of 6e-05
cd09110154 cd09110, PLDc_CLS_1, Catalytic domain, repeat 1, o 7e-05
COG50381227 COG5038, COG5038, Ca2+-dependent lipid-binding pro 1e-04
COG50381227 COG5038, COG5038, Ca2+-dependent lipid-binding pro 2e-04
cd04018151 cd04018, C2C_Ferlin, C2 domain third repeat in Fer 2e-04
cd04051125 cd04051, C2_SRC2_like, C2 domain present in Soybea 3e-04
cd00138119 cd00138, PLDc_SF, Catalytic domain of phospholipas 3e-04
pfam0061428 pfam00614, PLDc, Phospholipase D Active site motif 6e-04
cd09162172 cd09162, PLDc_CLS_unchar1_2, Putative catalytic do 8e-04
cd04014132 cd04014, C2_PKC_epsilon, C2 domain in Protein Kina 0.001
cd08401121 cd08401, C2A_RasA2_RasA3, C2 domain first repeat p 0.001
cd09113218 cd09113, PLDc_ymdC_like_2, Putative catalytic doma 0.001
cd08678126 cd08678, C2_C21orf25-like, C2 domain found in the 0.001
cd09163176 cd09163, PLDc_CLS_unchar2_2, Putative catalytic do 0.001
cd04042121 cd04042, C2A_MCTP_PRT, C2 domain first repeat foun 0.002
cd04041111 cd04041, C2A_fungal, C2 domain first repeat; funga 0.002
cd04027127 cd04027, C2B_Munc13, C2 domain second repeat in Mu 0.003
cd09155156 cd09155, PLDc_PaCLS_like_1, Putative catalytic dom 0.003
>gnl|CDD|178585 PLN03008, PLN03008, Phospholipase D delta Back     alignment and domain information 
 Score =  915 bits (2366), Expect = 0.0
 Identities = 467/875 (53%), Positives = 580/875 (66%), Gaps = 71/875 (8%)

Query: 26  STKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMF--------------------- 64
           + K S  V+LLHG+LD+ I  A+ LPNMDMF + L  +F                     
Sbjct: 2   AEKVSEDVMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKG 61

Query: 65  -----NSQMNTK-ITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHF 118
                N + + K ITSDPYVT+ V  A + RT V+ NS++P+W + F + +AH  A + F
Sbjct: 62  EFGDKNIRSHRKVITSDPYVTVVVPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEF 121

Query: 119 FVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMER 178
            VKD DV G+++IGT  IPV  I SG ++ G +PVL  SGKP K    + + +++TP ++
Sbjct: 122 QVKDDDVFGAQIIGTAKIPVRDIASGERISGWFPVLGASGKPPKAETAIFIDMKFTPFDQ 181

Query: 179 LSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCW 238
           +  Y  G+   P+  GV  TYFP+RKG +V LYQDAHV DG LP +GLD G  Y HGKCW
Sbjct: 182 IHSYRCGIAGDPERRGVRRTYFPVRKGSQVRLYQDAHVMDGTLPAIGLDNGKVYEHGKCW 241

Query: 239 YDICNAISQAQRLIYITGWSVWHKVKLVRDASPALD--CTLGELLRSKSQEGVRVLLLVW 296
            DIC AIS+A  +IYI GWS++HK+KLVR+     D   TLGELL+ KSQEGVRVLLLVW
Sbjct: 242 EDICYAISEAHHMIYIVGWSIFHKIKLVRETKVPRDKDMTLGELLKYKSQEGVRVLLLVW 301

Query: 297 DDPTSRSILGYKMDGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKE------- 349
           DD TS    G K  GVM THDEETR+ FKHSSV  +L PR A  +    KQ+        
Sbjct: 302 DDKTSHDKFGIKTPGVMGTHDEETRKFFKHSSVICVLSPRYASSKLGLFKQQASPIFSIY 361

Query: 350 ----VGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKD 405
               VGT++THHQK V+VD  A  N RK+ AF+GGLDLCDGRYD P H +   L T+ KD
Sbjct: 362 VMTVVGTLFTHHQKCVLVDTQAVGNNRKVTAFIGGLDLCDGRYDTPEHRILHDLDTVFKD 421

Query: 406 DYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGIKKLKSG--- 462
           D+HNPTF   T   PR+PWHDLH +IDGPAAYDVL NFE+RWRKA++         G   
Sbjct: 422 DFHNPTFPAGTKA-PRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTH 480

Query: 463 --DDALLRIERIPGII---------GIS----DAPSV---RENDAESWHVQIFRSIDSTS 504
             DDAL+RI RI  I+         G S    D P V   +E+D E+WHVQIFRSIDS S
Sbjct: 481 WQDDALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGS 540

Query: 505 VRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSY 564
           V+GFPK   EA +++L C K +++D SI TAY++ IRSAQHFIYIENQYF+GSSY W SY
Sbjct: 541 VKGFPKYEDEAEAQHLECAKRLVVDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSY 600

Query: 565 RDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTMQMM 624
           RD GA+NLIPME+ALKI  KIRA ERFA Y+VIP+WPEG P     Q IL+WQ +TMQMM
Sbjct: 601 RDAGADNLIPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKSGPVQEILYWQSQTMQMM 660

Query: 625 YETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGR 684
           Y+ I K L  V  +    P DYLNF+CLG RE +     + +G+  +       S    R
Sbjct: 661 YDVIAKELKAV--QSDAHPLDYLNFYCLGKREQLPDDMPATNGSVVSD------SYNFQR 712

Query: 685 FMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIY 744
           FMIYVH+KGMIVDDEYV++GSANINQRSM GT+DTEIAMGAYQP +TWA   RHP GQ+Y
Sbjct: 713 FMIYVHAKGMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVY 772

Query: 745 GYRMSLWAEHLGYIEDCFGQPETLECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEV 804
           GYRMSLWAEHLG   D F +P  LEC++KV ++ E NW++F     SE++ HLIKYP++V
Sbjct: 773 GYRMSLWAEHLGKTGDEFVEPSDLECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQV 832

Query: 805 DRKGKVRPIPGYETFPDVGGNIVGSF-FAIQENLT 838
           D  GKV P+P YETFPDVGG I+G+   A+ + LT
Sbjct: 833 DVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLT 867

Length = 868
>gnl|CDD|165912 PLN02270, PLN02270, phospholipase D alpha Back     alignment and domain information
>gnl|CDD|215202 PLN02352, PLN02352, phospholipase D epsilon Back     alignment and domain information
>gnl|CDD|197296 cd09200, PLDc_pPLDbeta_2, Catalytic domain, repeat 2, of plant beta-type phospholipase D Back     alignment and domain information
>gnl|CDD|197240 cd09142, PLDc_pPLD_like_2, Catalytic domain, repeat 2, of plant phospholipase D and similar proteins Back     alignment and domain information
>gnl|CDD|197294 cd09198, PLDc_pPLDbeta_1, Catalytic domain, repeat 1, of plant beta-type phospholipase D Back     alignment and domain information
>gnl|CDD|197237 cd09139, PLDc_pPLD_like_1, Catalytic domain, repeat 1, of plant phospholipase D and similar proteins Back     alignment and domain information
>gnl|CDD|197295 cd09199, PLDc_pPLDalpha_2, Catalytic domain, repeat 2, of plant alpha-type phospholipase D Back     alignment and domain information
>gnl|CDD|175982 cd04015, C2_plant_PLD, C2 domain present in plant phospholipase D (PLD) Back     alignment and domain information
>gnl|CDD|197293 cd09197, PLDc_pPLDalpha_1, Catalytic domain, repeat 1, of plant alpha-type phospholipase D Back     alignment and domain information
>gnl|CDD|197239 cd09141, PLDc_vPLD1_2_yPLD_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins Back     alignment and domain information
>gnl|CDD|197204 cd09105, PLDc_vPLD1_2_like_2, Catalytic domain, repeat 2, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins Back     alignment and domain information
>gnl|CDD|193000 pfam12357, PLD_C, Phospholipase D C terminal Back     alignment and domain information
>gnl|CDD|215467 PLN02866, PLN02866, phospholipase D Back     alignment and domain information
>gnl|CDD|197302 cd09844, PLDc_vPLD1_2, Catalytic domain, repeat 2, of vertebrate phospholipase D1 Back     alignment and domain information
>gnl|CDD|197203 cd09104, PLDc_vPLD1_2_like_1, Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, and similar proteins Back     alignment and domain information
>gnl|CDD|197236 cd09138, PLDc_vPLD1_2_yPLD_like_1, Catalytic domain, repeat 1, of vertebrate phospholipases, PLD1 and PLD2, yeast PLDs, and similar proteins Back     alignment and domain information
>gnl|CDD|197303 cd09845, PLDc_vPLD2_2, Catalytic domain, repeat 2, of vertebrate phospholipase D2 Back     alignment and domain information
>gnl|CDD|215467 PLN02866, PLN02866, phospholipase D Back     alignment and domain information
>gnl|CDD|197241 cd09143, PLDc_vPLD1_2_like_bac_2, Catalytic domain, repeat 2, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2 Back     alignment and domain information
>gnl|CDD|214577 smart00239, C2, Protein kinase C conserved region 2 (CalB) Back     alignment and domain information
>gnl|CDD|175973 cd00030, C2, C2 domain Back     alignment and domain information
>gnl|CDD|215765 pfam00168, C2, C2 domain Back     alignment and domain information
>gnl|CDD|197238 cd09140, PLDc_vPLD1_2_like_bac_1, Catalytic domain, repeat 1, of uncharacterized bacterial proteins with similarity to vertebrate phospholipases, PLD1 and PLD2 Back     alignment and domain information
>gnl|CDD|224419 COG1502, Cls, Phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|197300 cd09842, PLDc_vPLD1_1, Catalytic domain, repeat 1, of vertebrate phospholipase D1 Back     alignment and domain information
>gnl|CDD|197301 cd09843, PLDc_vPLD2_1, Catalytic domain, repeat 1, of vertebrate phospholipase D2 Back     alignment and domain information
>gnl|CDD|176010 cd04045, C2C_Tricalbin-like, C2 domain third repeat present in Tricalbin-like proteins Back     alignment and domain information
>gnl|CDD|176019 cd08373, C2A_Ferlin, C2 domain first repeat in Ferlin Back     alignment and domain information
>gnl|CDD|176037 cd08391, C2A_C2C_Synaptotagmin_like, C2 domain first and third repeat in Synaptotagmin-like proteins Back     alignment and domain information
>gnl|CDD|176009 cd04044, C2A_Tricalbin-like, C2 domain first repeat present in Tricalbin-like proteins Back     alignment and domain information
>gnl|CDD|176005 cd04040, C2D_Tricalbin-like, C2 domain fourth repeat present in Tricalbin-like proteins Back     alignment and domain information
>gnl|CDD|175974 cd00275, C2_PLC_like, C2 domain present in Phosphoinositide-specific phospholipases C (PLC) Back     alignment and domain information
>gnl|CDD|175990 cd04024, C2A_Synaptotagmin-like, C2 domain first repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|176001 cd04036, C2_cPLA2, C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) Back     alignment and domain information
>gnl|CDD|197546 smart00155, PLDc, Phospholipase D Back     alignment and domain information
>gnl|CDD|175976 cd04009, C2B_Munc13-like, C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins Back     alignment and domain information
>gnl|CDD|176015 cd04050, C2B_Synaptotagmin-like, C2 domain second repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>gnl|CDD|176012 cd04047, C2B_Copine, C2 domain second repeat in Copine Back     alignment and domain information
>gnl|CDD|176029 cd08383, C2A_RasGAP, C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) Back     alignment and domain information
>gnl|CDD|216022 pfam00614, PLDc, Phospholipase D Active site motif Back     alignment and domain information
>gnl|CDD|197226 cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins Back     alignment and domain information
>gnl|CDD|221916 pfam13091, PLDc_2, PLD-like domain Back     alignment and domain information
>gnl|CDD|176018 cd04054, C2A_Rasal1_RasA4, C2 domain first repeat present in RasA1 and RasA4 Back     alignment and domain information
>gnl|CDD|197211 cd09112, PLDc_CLS_2, catalytic domain repeat 2 of bacterial cardiolipin synthase and similar proteins Back     alignment and domain information
>gnl|CDD|197209 cd09110, PLDc_CLS_1, Catalytic domain, repeat 1, of bacterial cardiolipin synthase and similar proteins Back     alignment and domain information
>gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|227371 COG5038, COG5038, Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>gnl|CDD|175985 cd04018, C2C_Ferlin, C2 domain third repeat in Ferlin Back     alignment and domain information
>gnl|CDD|176016 cd04051, C2_SRC2_like, C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins Back     alignment and domain information
>gnl|CDD|197200 cd00138, PLDc_SF, Catalytic domain of phospholipase D superfamily proteins Back     alignment and domain information
>gnl|CDD|216022 pfam00614, PLDc, Phospholipase D Active site motif Back     alignment and domain information
>gnl|CDD|197259 cd09162, PLDc_CLS_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized proteins similar to bacterial cardiolipin synthase Back     alignment and domain information
>gnl|CDD|175981 cd04014, C2_PKC_epsilon, C2 domain in Protein Kinase C (PKC) epsilon Back     alignment and domain information
>gnl|CDD|176046 cd08401, C2A_RasA2_RasA3, C2 domain first repeat present in RasA2 and RasA3 Back     alignment and domain information
>gnl|CDD|197212 cd09113, PLDc_ymdC_like_2, Putative catalytic domain, repeat 2, of Escherichia coli uncharacterized protein ymdC and similar proteins Back     alignment and domain information
>gnl|CDD|176060 cd08678, C2_C21orf25-like, C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein Back     alignment and domain information
>gnl|CDD|197260 cd09163, PLDc_CLS_unchar2_2, Putative catalytic domain, repeat 2, of uncharacterized proteins similar to bacterial cardiolipin synthase Back     alignment and domain information
>gnl|CDD|176007 cd04042, C2A_MCTP_PRT, C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) Back     alignment and domain information
>gnl|CDD|176006 cd04041, C2A_fungal, C2 domain first repeat; fungal group Back     alignment and domain information
>gnl|CDD|175993 cd04027, C2B_Munc13, C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins Back     alignment and domain information
>gnl|CDD|197252 cd09155, PLDc_PaCLS_like_1, Putative catalytic domain, repeat 1, of Pseudomonas aeruginosa cardiolipin synthase and similar proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 839
PLN03008868 Phospholipase D delta 100.0
PLN02270808 phospholipase D alpha 100.0
PLN02352758 phospholipase D epsilon 100.0
KOG1329887 consensus Phospholipase D1 [Lipid transport and me 100.0
PLN028661068 phospholipase D 100.0
PRK12452509 cardiolipin synthetase; Reviewed 100.0
PRK01642483 cls cardiolipin synthetase; Reviewed 100.0
PRK11263411 cardiolipin synthase 2; Provisional 100.0
COG1502438 Cls Phosphatidylserine/phosphatidylglycerophosphat 100.0
PRK09428451 pssA phosphatidylserine synthase; Provisional 100.0
PHA02820424 phospholipase-D-like protein; Provisional 100.0
PHA03003369 palmytilated EEV membrane glycoprotein; Provisiona 100.0
cd04015158 C2_plant_PLD C2 domain present in plant phospholip 99.92
PF1235774 PLD_C: Phospholipase D C terminal ; InterPro: IPR0 99.88
cd04016121 C2_Tollip C2 domain present in Toll-interacting pr 99.88
cd08379126 C2D_MCTP_PRT_plant C2 domain fourth repeat found i 99.85
cd04013146 C2_SynGAP_like C2 domain present in Ras GTPase act 99.84
cd08682126 C2_Rab11-FIP_classI C2 domain found in Rab11-famil 99.82
cd04042121 C2A_MCTP_PRT C2 domain first repeat found in Multi 99.82
PRK05443691 polyphosphate kinase; Provisional 99.82
cd04019150 C2C_MCTP_PRT_plant C2 domain third repeat found in 99.79
cd08400126 C2_Ras_p21A1 C2 domain present in RAS p21 protein 99.79
cd08401121 C2A_RasA2_RasA3 C2 domain first repeat present in 99.79
cd08681118 C2_fungal_Inn1p-like C2 domain found in fungal Ing 99.79
TIGR03705672 poly_P_kin polyphosphate kinase 1. Members of this 99.79
cd04022127 C2A_MCTP_PRT_plant C2 domain first repeat found in 99.77
KOG1030168 consensus Predicted Ca2+-dependent phospholipid-bi 99.76
cd08378121 C2B_MCTP_PRT_plant C2 domain second repeat found i 99.76
cd08678126 C2_C21orf25-like C2 domain found in the Human chro 99.75
cd04044124 C2A_Tricalbin-like C2 domain first repeat present 99.74
cd08377119 C2C_MCTP_PRT C2 domain third repeat found in Multi 99.74
cd04024128 C2A_Synaptotagmin-like C2 domain first repeat pres 99.73
cd08391121 C2A_C2C_Synaptotagmin_like C2 domain first and thi 99.73
cd08376116 C2B_MCTP_PRT C2 domain second repeat found in Mult 99.73
cd04014132 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) 99.73
cd04054121 C2A_Rasal1_RasA4 C2 domain first repeat present in 99.72
cd04025123 C2B_RasA1_RasA4 C2 domain second repeat present in 99.72
cd04046126 C2_Calpain C2 domain present in Calpain proteins. 99.72
cd04033133 C2_NEDD4_NEDD4L C2 domain present in the Human neu 99.71
cd08373127 C2A_Ferlin C2 domain first repeat in Ferlin. Ferli 99.71
cd04036119 C2_cPLA2 C2 domain present in cytosolic PhosphoLip 99.71
cd08395120 C2C_Munc13 C2 domain third repeat in Munc13 (mamma 99.7
cd04050105 C2B_Synaptotagmin-like C2 domain second repeat pre 99.7
cd08375136 C2_Intersectin C2 domain present in Intersectin. A 99.7
cd08381122 C2B_PI3K_class_II C2 domain second repeat present 99.69
cd08394127 C2A_Munc13 C2 domain first repeat in Munc13 (mamma 99.69
cd08688110 C2_KIAA0528-like C2 domain found in the Human KIAA 99.69
cd04028146 C2B_RIM1alpha C2 domain second repeat contained in 99.69
cd08685119 C2_RGS-like C2 domain of the Regulator Of G-Protei 99.68
cd08677118 C2A_Synaptotagmin-13 C2 domain. Synaptotagmin is a 99.68
cd04045120 C2C_Tricalbin-like C2 domain third repeat present 99.67
cd08382123 C2_Smurf-like C2 domain present in Smad ubiquitina 99.67
cd04018151 C2C_Ferlin C2 domain third repeat in Ferlin. Ferli 99.66
cd04010148 C2B_RasA3 C2 domain second repeat present in RAS p 99.66
cd04027127 C2B_Munc13 C2 domain second repeat in Munc13 (mamm 99.66
cd04051125 C2_SRC2_like C2 domain present in Soybean genes Re 99.66
cd08387124 C2A_Synaptotagmin-8 C2A domain first repeat presen 99.66
cd04029125 C2A_SLP-4_5 C2 domain first repeat present in Syna 99.65
cd04039108 C2_PSD C2 domain present in Phosphatidylserine dec 99.65
cd04017135 C2D_Ferlin C2 domain fourth repeat in Ferlin. Ferl 99.64
cd08385124 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repe 99.64
cd04041111 C2A_fungal C2 domain first repeat; fungal group. C 99.64
cd08393125 C2A_SLP-1_2 C2 domain first repeat present in Syna 99.64
cd08383117 C2A_RasGAP C2 domain (first repeat) of Ras GTPase 99.64
cd08676153 C2A_Munc13-like C2 domain first repeat in Munc13 ( 99.63
cd04049124 C2_putative_Elicitor-responsive_gene C2 domain pre 99.62
cd04043126 C2_Munc13_fungal C2 domain in Munc13 (mammalian un 99.62
cd04030127 C2C_KIAA1228 C2 domain third repeat present in unc 99.62
cd04052111 C2B_Tricalbin-like C2 domain second repeat present 99.61
cd04040115 C2D_Tricalbin-like C2 domain fourth repeat present 99.61
cd08690155 C2_Freud-1 C2 domain found in 5' repressor element 99.61
cd08392128 C2A_SLP-3 C2 domain first repeat present in Synapt 99.61
cd04031125 C2A_RIM1alpha C2 domain first repeat contained in 99.61
cd04011111 C2B_Ferlin C2 domain second repeat in Ferlin. Ferl 99.61
cd08680124 C2_Kibra C2 domain found in Human protein Kibra. K 99.6
cd08386125 C2A_Synaptotagmin-7 C2A domain first repeat presen 99.59
cd08521123 C2A_SLP C2 domain first repeat present in Synaptot 99.59
cd08384133 C2B_Rabphilin_Doc2 C2 domain second repeat present 99.59
cd08407138 C2B_Synaptotagmin-13 C2 domain second repeat prese 99.57
cd08388128 C2A_Synaptotagmin-4-11 C2A domain first repeat pre 99.57
cd08404136 C2B_Synaptotagmin-4 C2 domain second repeat presen 99.57
cd04038145 C2_ArfGAP C2 domain present in Arf GTPase Activati 99.57
cd04032127 C2_Perforin C2 domain of Perforin. Perforin contai 99.56
cd08406136 C2B_Synaptotagmin-12 C2 domain second repeat prese 99.56
cd08390123 C2A_Synaptotagmin-15-17 C2A domain first repeat pr 99.56
cd04020162 C2B_SLP_1-2-3-4 C2 domain second repeat present in 99.56
cd08675137 C2B_RasGAP C2 domain second repeat of Ras GTPase a 99.56
cd08389124 C2A_Synaptotagmin-14_16 C2A domain first repeat pr 99.55
cd00275128 C2_PLC_like C2 domain present in Phosphoinositide- 99.55
cd08403134 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repe 99.55
cd08402136 C2B_Synaptotagmin-1 C2 domain second repeat presen 99.55
cd08405136 C2B_Synaptotagmin-7 C2 domain second repeat presen 99.54
KOG1028421 consensus Ca2+-dependent phospholipid-binding prot 99.54
KOG0696683 consensus Serine/threonine protein kinase [Signal 99.54
cd00276134 C2B_Synaptotagmin C2 domain second repeat present 99.53
cd08692135 C2B_Tac2-N C2 domain second repeat found in Tac2-N 99.53
cd04021125 C2_E3_ubiquitin_ligase C2 domain present in E3 ubi 99.53
cd04026131 C2_PKC_alpha_gamma C2 domain in Protein Kinase C ( 99.52
cd08686118 C2_ABR C2 domain in the Active BCR (Breakpoint clu 99.51
cd08410135 C2B_Synaptotagmin-17 C2 domain second repeat prese 99.51
PHA02820 424 phospholipase-D-like protein; Provisional 99.5
cd08691137 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-li 99.5
cd00138176 PLDc Phospholipase D. Active site motifs; The PLD 99.5
cd08409137 C2B_Synaptotagmin-15 C2 domain second repeat prese 99.5
cd04009133 C2B_Munc13-like C2 domain second repeat in Munc13 99.49
PLN032002102 cellulose synthase-interactive protein; Provisiona 99.49
cd04048120 C2A_Copine C2 domain first repeat in Copine. There 99.48
cd08408138 C2B_Synaptotagmin-14_16 C2 domain second repeat pr 99.48
cd04037124 C2E_Ferlin C2 domain fifth repeat in Ferlin. Ferli 99.47
cd04035123 C2A_Rabphilin_Doc2 C2 domain first repeat present 99.46
KOG3603456 consensus Predicted phospholipase D [General funct 99.45
cd00138176 PLDc Phospholipase D. Active site motifs; The PLD 99.39
PRK12452509 cardiolipin synthetase; Reviewed 99.36
PRK13912177 nuclease NucT; Provisional 99.35
PRK13912177 nuclease NucT; Provisional 99.35
PHA03003369 palmytilated EEV membrane glycoprotein; Provisiona 99.35
cd04047110 C2B_Copine C2 domain second repeat in Copine. Ther 99.32
KOG1011 1283 consensus Neurotransmitter release regulator, UNC- 99.3
KOG2059800 consensus Ras GTPase-activating protein [Signal tr 99.27
PF13091126 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 99.26
PF0016885 C2: C2 domain; InterPro: IPR000008 The C2 domain i 99.24
PLN02223537 phosphoinositide phospholipase C 99.23
COG50381227 Ca2+-dependent lipid-binding protein, contains C2 99.16
cd00030102 C2 C2 domain. The C2 domain was first identified i 99.16
COG50381227 Ca2+-dependent lipid-binding protein, contains C2 99.15
smart00239101 C2 Protein kinase C conserved region 2 (CalB). Ca2 99.14
PLN02952599 phosphoinositide phospholipase C 99.12
PF13091126 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 99.09
PLN02230598 phosphoinositide phospholipase C 4 99.08
PRK01642483 cls cardiolipin synthetase; Reviewed 99.07
KOG0169746 consensus Phosphoinositide-specific phospholipase 99.05
PLN02222581 phosphoinositide phospholipase C 2 99.03
PLN02228567 Phosphoinositide phospholipase C 99.0
cd08374133 C2F_Ferlin C2 domain sixth repeat in Ferlin. Ferli 98.97
cd08689109 C2_fungal_Pkc1p C2 domain found in protein kinase 98.96
KOG1028421 consensus Ca2+-dependent phospholipid-binding prot 98.92
PRK11263411 cardiolipin synthase 2; Provisional 98.89
PRK05443 691 polyphosphate kinase; Provisional 98.88
PF0061428 PLDc: Phospholipase D Active site motif; InterPro: 98.86
KOG12641267 consensus Phospholipase C [Lipid transport and met 98.72
KOG1031 1169 consensus Predicted Ca2+-dependent phospholipid-bi 98.7
PRK09428 451 pssA phosphatidylserine synthase; Provisional 98.66
KOG3603456 consensus Predicted phospholipase D [General funct 98.65
KOG1328 1103 consensus Synaptic vesicle protein BAIAP3, involve 98.61
smart0015528 PLDc Phospholipase D. Active site motifs. Phosphat 98.57
KOG13281103 consensus Synaptic vesicle protein BAIAP3, involve 98.35
COG1502438 Cls Phosphatidylserine/phosphatidylglycerophosphat 98.25
PF0061428 PLDc: Phospholipase D Active site motif; InterPro: 98.19
cd08683143 C2_C2cd3 C2 domain found in C2 calcium-dependent d 98.11
KOG2059800 consensus Ras GTPase-activating protein [Signal tr 97.88
KOG3964469 consensus Phosphatidylglycerolphosphate synthase [ 97.82
TIGR03705672 poly_P_kin polyphosphate kinase 1. Members of this 97.62
KOG09051639 consensus Phosphoinositide 3-kinase [Signal transd 97.56
smart0015528 PLDc Phospholipase D. Active site motifs. Phosphat 97.48
KOG10111283 consensus Neurotransmitter release regulator, UNC- 97.46
KOG13261105 consensus Membrane-associated protein FER-1 and re 97.45
PLN02964644 phosphatidylserine decarboxylase 97.43
PLN02866 1068 phospholipase D 97.37
KOG1013362 consensus Synaptic vesicle protein rabphilin-3A [I 97.37
PF13918177 PLDc_3: PLD-like domain 97.34
KOG1013362 consensus Synaptic vesicle protein rabphilin-3A [I 97.29
PF07894284 DUF1669: Protein of unknown function (DUF1669); In 97.12
KOG12651189 consensus Phospholipase C [Lipid transport and met 96.99
KOG2060405 consensus Rab3 effector RIM1 and related proteins, 96.89
PF13918177 PLDc_3: PLD-like domain 96.78
KOG1326 1105 consensus Membrane-associated protein FER-1 and re 96.75
cd08684103 C2A_Tac2-N C2 domain first repeat found in Tac2-N 96.65
PF07894284 DUF1669: Protein of unknown function (DUF1669); In 96.24
KOG1327529 consensus Copine [Signal transduction mechanisms] 95.88
COG0855696 Ppk Polyphosphate kinase [Inorganic ion transport 95.87
KOG3837523 consensus Uncharacterized conserved protein, conta 95.77
PLN02352758 phospholipase D epsilon 95.61
PF10358143 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; 95.57
PF13090352 PP_kinase_C: Polyphosphate kinase C-terminal domai 95.29
PF12416340 DUF3668: Cep120 protein; InterPro: IPR022136 This 95.24
PF11495233 Regulator_TrmB: Archaeal transcriptional regulator 95.1
cd08398158 C2_PI3K_class_I_alpha C2 domain present in class I 94.73
KOG1329887 consensus Phospholipase D1 [Lipid transport and me 94.03
COG3886198 Predicted HKD family nuclease [DNA replication, re 94.0
cd08693173 C2_PI3K_class_I_beta_delta C2 domain present in cl 93.32
PLN03008868 Phospholipase D delta 92.92
PLN02270808 phospholipase D alpha 92.51
PF15627156 CEP76-C2: CEP76 C2 domain 92.18
KOG1452442 consensus Predicted Rho GTPase-activating protein 91.09
cd08397159 C2_PI3K_class_III C2 domain present in class III p 90.95
cd04012171 C2A_PI3K_class_II C2 domain first repeat present i 90.83
cd08380156 C2_PI3K_like C2 domain present in phosphatidylinos 90.74
PF15625168 CC2D2AN-C2: CC2D2A N-terminal C2 domain 89.89
cd0868798 C2_PKN-like C2 domain in Protein kinase C-like (PK 88.86
PF00792142 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: I 87.84
cd08695189 C2_Dock-B C2 domains found in Dedicator Of CytoKin 87.81
cd08399178 C2_PI3K_class_I_gamma C2 domain present in class I 87.22
cd08694196 C2_Dock-A C2 domains found in Dedicator Of CytoKin 86.96
PF13090352 PP_kinase_C: Polyphosphate kinase C-terminal domai 86.49
PF14429184 DOCK-C2: C2 domain in Dock180 and Zizimin proteins 85.91
PF11618107 DUF3250: Protein of unknown function (DUF3250); In 82.95
KOG42691112 consensus Rac GTPase-activating protein BCR/ABR [S 82.3
KOG1327529 consensus Copine [Signal transduction mechanisms] 80.8
smart00142100 PI3K_C2 Phosphoinositide 3-kinase, region postulat 80.61
>PLN03008 Phospholipase D delta Back     alignment and domain information 
Probab=100.00  E-value=4.2e-181  Score=1538.39  Aligned_cols=802  Identities=57%  Similarity=0.994  Sum_probs=726.6

Q ss_pred             CCceeeeeceEEEEEEEEeeCCCCCCCCCcccccccc---------------------------ccCCCCCCCCcEEEEE
Q 003210           29 GSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFN---------------------------SQMNTKITSDPYVTIA   81 (839)
Q Consensus        29 ~~~~~~l~~G~L~V~I~~A~~L~~~d~~~~~~~~~~~---------------------------~~~~~~~~sDPYv~v~   81 (839)
                      -+.+++|+||+|+++|++|++|++||++.+...++|.                           .+++...++||||+|.
T Consensus         5 ~~~~~~llhg~l~~~i~ea~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tSDPYV~I~   84 (868)
T PLN03008          5 VSEDVMLLHGDLDLKIVKARRLPNMDMFSEHLRRLFTACNACARPTDTDDVDPRDKGEFGDKNIRSHRKVITSDPYVTVV   84 (868)
T ss_pred             cccceEEeecccEEEEEEcccCCchhHHHHHHHhhcccccccccccccccccccccccccccccccccccCCCCceEEEE
Confidence            3678899999999999999999999876653333321                           0123356799999999


Q ss_pred             ECCEEEEEeeeeeCCCCCeeeeEEEEEccCCCceEEEEEEeecCCCCcceeEEEEeceeeecCccccceeeecCCCCCCC
Q 003210           82 VAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPC  161 (839)
Q Consensus        82 l~~~~~~rT~vi~~~~nP~WnE~F~~~v~~~~~~L~~~V~d~d~~~d~~IG~~~i~l~~l~~g~~~~~w~~L~~~~gk~~  161 (839)
                      +++++++||++++++.||+|||+|+|+|+++...|+|+|+|+|.+++++||++.|||+++..|..++.|++|++..+++.
T Consensus        85 Lg~~rv~RTrVi~n~~NPvWNE~F~f~vah~~s~L~f~VkD~D~~gaD~IG~a~IPL~~L~~Ge~vd~Wl~Ll~~~~kp~  164 (868)
T PLN03008         85 VPQATLARTRVLKNSQEPLWDEKFNISIAHPFAYLEFQVKDDDVFGAQIIGTAKIPVRDIASGERISGWFPVLGASGKPP  164 (868)
T ss_pred             ECCcceeeEEeCCCCCCCCcceeEEEEecCCCceEEEEEEcCCccCCceeEEEEEEHHHcCCCCceEEEEEccccCCCCC
Confidence            99998889999999999999999999999998999999999999999999999999999999999999999999999999


Q ss_pred             CCCceEEEEEEeecccccccccCCCCCCCCCCCCCCCCCccccCceeEEeecCCCCCCCCCceeecCCccccchhhHHHH
Q 003210          162 KPGATLTLSIQYTPMERLSFYHRGVGEGPDYNGVPGTYFPLRKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDI  241 (839)
Q Consensus       162 ~~~g~L~l~l~f~p~~~~~~~~~Gv~~g~~~~gv~~~~~p~~~g~~v~l~~dg~~~~~~~~~~~~~~~~~y~~~~~f~~l  241 (839)
                      +++++|+|+|+|+|+..++.|.+|++++++|.|||.||||+|.||+|+||||||.+|+++|.|.|+||+.|+|++||++|
T Consensus       165 k~~~kl~v~lqf~pv~~~~~~~~gv~~~~~~~gvp~t~Fp~r~g~~VtlYqdAhv~d~~~p~i~l~~g~~y~~~rcwedi  244 (868)
T PLN03008        165 KAETAIFIDMKFTPFDQIHSYRCGIAGDPERRGVRRTYFPVRKGSQVRLYQDAHVMDGTLPAIGLDNGKVYEHGKCWEDI  244 (868)
T ss_pred             CCCcEEEEEEEEEEccccccccccccCCcCCCCCCCccccCCCCCEeEEeccCCCCCCCCCccccCCCccccccccHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcccccEEEEEecccceeEecCCC--CCCcchHHHHHHhhhcCCCeEEEEEecCCccccccccccccccccCcHH
Q 003210          242 CNAISQAQRLIYITGWSVWHKVKLVRDAS--PALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQTHDEE  319 (839)
Q Consensus       242 ~~aI~~A~~~I~I~~w~~~~~~~l~r~~~--~~~~~~l~~lL~~kA~~GV~VriLvwd~~~s~~~~~~~~~~~~~~~~~~  319 (839)
                      ++||++||++|||++||++|+++|+|++.  ...+.+|++||++||+|||+|+|||||+++|...++++..|+|.+++++
T Consensus       245 ~~AI~~Ak~~IyI~gWsl~~ei~L~R~~~~~~~~~~~Lg~LLk~KA~eGVrV~ilvwdd~ts~~~~~~~~~g~m~thdee  324 (868)
T PLN03008        245 CYAISEAHHMIYIVGWSIFHKIKLVRETKVPRDKDMTLGELLKYKSQEGVRVLLLVWDDKTSHDKFGIKTPGVMGTHDEE  324 (868)
T ss_pred             HHHHHhhhheEEEeceeecceeEEecCCCCCCCCCccHHHHHHHHHHCCCEEEEEEecccccccccccccccccccccHH
Confidence            99999999999999999999999999873  2247899999999999999999999999998866678888999999999


Q ss_pred             HHhhhcCCCcEEEeccCccCccccccccc-----------cccceecccceEEEEecCCCCCCccEEEEEccccCCCCCC
Q 003210          320 TRRVFKHSSVKVLLCPRIAGKRHSWAKQK-----------EVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRY  388 (839)
Q Consensus       320 ~~~~~~~~~v~v~~~p~~~~~~~~~~~~~-----------~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dl~~~r~  388 (839)
                      ++++|+|++|.|.++|+..+...+++++.           .++++|+||||+||||++.++++|+.+|||||+|||+|||
T Consensus       325 t~~~f~h~~v~~~l~pr~~~~~~~~~~~~~~~~~~iy~~~~~~~~~sHHQK~VVID~~~~~~~r~~vAFvGGiDLc~gRw  404 (868)
T PLN03008        325 TRKFFKHSSVICVLSPRYASSKLGLFKQQASPIFSIYVMTVVGTLFTHHQKCVLVDTQAVGNNRKVTAFIGGLDLCDGRY  404 (868)
T ss_pred             HHHhhcCCCeeEEECCCccccccchhhccccccccccccccccccccccceEEEEccCCCCCccceEEEEcceeccCCcc
Confidence            99999999999999998877667776652           3467899999999999987777899999999999999999


Q ss_pred             CCCCCCCccccccccCCCCCCCcccCCCCCCCCCCeeeeeeeeeChHHHHHHHHHHHHHhhhcCCCCc----ccC-CCCc
Q 003210          389 DNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPHGI----KKL-KSGD  463 (839)
Q Consensus       389 Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~~pWhDv~~~i~Gpaa~dl~~~F~~rW~~~~~~~~~----~~l-~~~~  463 (839)
                      ||+.|++++++++.+.+||+||++.+ ..+.|++||||+|++|+||||++|+.+|++||+++++...+    ++. ...+
T Consensus       405 DT~~H~l~~~l~t~~~~D~~np~~~~-~~~~p~~PWHDvh~rVeGPaV~dL~~~F~qRW~~aTg~~~~~~~~k~~~~~~~  483 (868)
T PLN03008        405 DTPEHRILHDLDTVFKDDFHNPTFPA-GTKAPRQPWHDLHCRIDGPAAYDVLINFEQRWRKATRWKEFSLRLKGKTHWQD  483 (868)
T ss_pred             CCcCCCccccccccccccccCccccC-CCCCCCCCeEEEEEEEECHHHHHHHHHHHHHHHHhhCcccccccccccccccc
Confidence            99999999999999999999998754 34578999999999999999999999999999999874311    111 1234


Q ss_pred             hhhhhcccCCCCcCCCC-------------CCC---CCCCCCCcceeeEeeeccCcccCCCCCCcchhcccccccCCccc
Q 003210          464 DALLRIERIPGIIGISD-------------APS---VRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVL  527 (839)
Q Consensus       464 ~~~~~~~~~p~~~~~~~-------------~~~---~~~~~~~~~~vQv~rs~~~~~~~~~p~~p~~~~~~~~~~g~~~~  527 (839)
                      +.++.+.+++.++.+..             .+.   ....++++|.+|+|||++.|+++++|..+.++...+++||++..
T Consensus       484 d~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~d~~~w~vQifRSId~~sa~g~P~~~~~~~~~~l~~gk~~~  563 (868)
T PLN03008        484 DALIRIGRISWILSPVFKFLKDGTSIIPEDDPCVWVSKEDDPENWHVQIFRSIDSGSVKGFPKYEDEAEAQHLECAKRLV  563 (868)
T ss_pred             chhcchhhcccccCCCccccccccccccCCCCccCccccCCCCccccceeeecCchhhcCCCCCcchhhhhccccccccc
Confidence            56666666655443210             010   11246688999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHhccceEEEeecccccccCCcccccccCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCc
Q 003210          528 IDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTG  607 (839)
Q Consensus       528 ~e~sI~~ayl~~I~~A~~~IyIenqYFi~~~~~~~~~~~~~~~n~i~~~ia~~ia~~~~~~~g~~V~ivlP~~peg~~~~  607 (839)
                      +|+||++||++||++||||||||||||+++++.|+++++.++.|+||++|+++|+++++++++|+|+||+|+||||.+.+
T Consensus       564 ie~SIq~aYi~aIr~A~hFIYIENQYFiss~~~w~~~~~~~~~n~I~~eia~kI~~ki~~~e~f~V~IViP~~peG~~~s  643 (868)
T PLN03008        564 VDKSIQTAYIQTIRSAQHFIYIENQYFLGSSYAWPSYRDAGADNLIPMELALKIVSKIRAKERFAVYVVIPLWPEGDPKS  643 (868)
T ss_pred             hhhhHHHHHHHHHHhhccEEEEehhhhhccccccccccccccccchhHHHHHHHHHHHhCCCCCEEEEEECCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHcCcCCCCCccCceeeeecCccccccccCCCCCCCCCCCCChhhhcccCceeeE
Q 003210          608 AATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMI  687 (839)
Q Consensus       608 ~~~~~i~~~~~~t~~~~~~~~~~~L~~~G~~~~~~p~~y~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  687 (839)
                      ++.|+|++||++||++||.+++++|++.|.+.  +|.+|++|||||||+....      ..++..++.+..+|++|+++|
T Consensus       644 g~vq~Il~wq~~TM~~~~~~I~~~L~~~~~d~--~p~dyl~fy~L~~~e~~~~------~~~~~~~~~~~~a~~~rr~~I  715 (868)
T PLN03008        644 GPVQEILYWQSQTMQMMYDVIAKELKAVQSDA--HPLDYLNFYCLGKREQLPD------DMPATNGSVVSDSYNFQRFMI  715 (868)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhhcccC--CccCEEEEecccccccccC------CCCCCCCchhhhhhhccceeE
Confidence            99999999999999999999999999988654  5889999999999987642      123344556677888999999


Q ss_pred             EEeeeEEEEeeeEEEEeccccCCCCCCCCCCcceEEeeecchhhhhhccCCCCchhHHHHHHHHHHHhCCCccccCCCcc
Q 003210          688 YVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEHLGYIEDCFGQPET  767 (839)
Q Consensus       688 yvHSKlmIVDD~~~iIGSANln~RSm~g~~DsEi~v~i~d~~~~~~~~~~~~~~~~~~lR~~Lw~ehlg~~~~~~~~~~~  767 (839)
                      |||||+|||||++++|||||||+|||.|+||+|+++.++++.++|+...+.++|+|++||++||+||||+.++.|.+|+|
T Consensus       716 YvHsK~~ivDd~~~~iGSaN~n~RS~~~~Rd~E~~~~~~~~~~~~~~~~~~~rg~I~g~R~sLwaEHLG~~~~~~~~p~s  795 (868)
T PLN03008        716 YVHAKGMIVDDEYVLMGSANINQRSMAGTKDTEIAMGAYQPNHTWAHKGRHPRGQVYGYRMSLWAEHLGKTGDEFVEPSD  795 (868)
T ss_pred             EEeeeEEEECCCEEEEeccccCHhhccCCCCceEeEEeccccccccccCcchhhHHHHHHHHHHHHHhCCCHHHccCCCC
Confidence            99999999999999999999999999999999999999999999876677899999999999999999999999999999


Q ss_pred             hhHHHHhhhhhccchhhhhhhhhccccccccccccccCCCCCccCCCCCCCCCCCCCccccccc-CCCCCCCC
Q 003210          768 LECVRKVRSVGENNWQQFAADDQSEMRSHLIKYPVEVDRKGKVRPIPGYETFPDVGGNIVGSFF-AIQENLTI  839 (839)
Q Consensus       768 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  839 (839)
                      ++|+++||++|++||++|+++++.+|+|||++||+.|+.+|+|++|||+|+||||+|+|+|+++ +||++|||
T Consensus       796 ~ecv~~vn~~a~~~w~~y~~~~~~~~~ghl~~yp~~v~~~g~v~~l~g~~~fpd~~~~v~g~~~~~lp~~ltt  868 (868)
T PLN03008        796 LECLKKVNTISEENWKRFIDPKFSELQGHLIKYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLTT  868 (868)
T ss_pred             HHHHHHHHHHHHHHHHHhhccccccCCcccccCceEecCCCcEeeCCCCCcCCCCCCceeccccccCCccccC
Confidence            9999999999999999999999999999999999999999999999999999999999999996 89999997

>PLN02270 phospholipase D alpha Back     alignment and domain information
>PLN02352 phospholipase D epsilon Back     alignment and domain information
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism] Back     alignment and domain information
>PLN02866 phospholipase D Back     alignment and domain information
>PRK12452 cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK01642 cls cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK11263 cardiolipin synthase 2; Provisional Back     alignment and domain information
>COG1502 Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>PRK09428 pssA phosphatidylserine synthase; Provisional Back     alignment and domain information
>PHA02820 phospholipase-D-like protein; Provisional Back     alignment and domain information
>PHA03003 palmytilated EEV membrane glycoprotein; Provisional Back     alignment and domain information
>cd04015 C2_plant_PLD C2 domain present in plant phospholipase D (PLD) Back     alignment and domain information
>PF12357 PLD_C: Phospholipase D C terminal ; InterPro: IPR024632 Phospholipase D (PLD) catalyses the hydrolysis of the phosphodiester bond of glycerophospholipids to generate phosphatidic acid and a free head group Back     alignment and domain information
>cd04016 C2_Tollip C2 domain present in Toll-interacting protein (Tollip) Back     alignment and domain information
>cd08379 C2D_MCTP_PRT_plant C2 domain fourth repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset Back     alignment and domain information
>cd04013 C2_SynGAP_like C2 domain present in Ras GTPase activating protein (GAP) family Back     alignment and domain information
>cd08682 C2_Rab11-FIP_classI C2 domain found in Rab11-family interacting proteins (FIP) class I Back     alignment and domain information
>cd04042 C2A_MCTP_PRT C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) Back     alignment and domain information
>PRK05443 polyphosphate kinase; Provisional Back     alignment and domain information
>cd04019 C2C_MCTP_PRT_plant C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset Back     alignment and domain information
>cd08400 C2_Ras_p21A1 C2 domain present in RAS p21 protein activator 1 (RasA1) Back     alignment and domain information
>cd08401 C2A_RasA2_RasA3 C2 domain first repeat present in RasA2 and RasA3 Back     alignment and domain information
>cd08681 C2_fungal_Inn1p-like C2 domain found in fungal Ingression 1 (Inn1) proteins Back     alignment and domain information
>TIGR03705 poly_P_kin polyphosphate kinase 1 Back     alignment and domain information
>cd04022 C2A_MCTP_PRT_plant C2 domain first repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset Back     alignment and domain information
>KOG1030 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] Back     alignment and domain information
>cd08378 C2B_MCTP_PRT_plant C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP); plant subset Back     alignment and domain information
>cd08678 C2_C21orf25-like C2 domain found in the Human chromosome 21 open reading frame 25 (C21orf25) protein Back     alignment and domain information
>cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins Back     alignment and domain information
>cd08377 C2C_MCTP_PRT C2 domain third repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) Back     alignment and domain information
>cd04024 C2A_Synaptotagmin-like C2 domain first repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>cd08391 C2A_C2C_Synaptotagmin_like C2 domain first and third repeat in Synaptotagmin-like proteins Back     alignment and domain information
>cd08376 C2B_MCTP_PRT C2 domain second repeat found in Multiple C2 domain and Transmembrane region Proteins (MCTP) Back     alignment and domain information
>cd04014 C2_PKC_epsilon C2 domain in Protein Kinase C (PKC) epsilon Back     alignment and domain information
>cd04054 C2A_Rasal1_RasA4 C2 domain first repeat present in RasA1 and RasA4 Back     alignment and domain information
>cd04025 C2B_RasA1_RasA4 C2 domain second repeat present in RasA1 and RasA4 Back     alignment and domain information
>cd04046 C2_Calpain C2 domain present in Calpain proteins Back     alignment and domain information
>cd04033 C2_NEDD4_NEDD4L C2 domain present in the Human neural precursor cell-expressed, developmentally down-regulated 4 (NEDD4) and NEDD4-like (NEDD4L/NEDD42) Back     alignment and domain information
>cd08373 C2A_Ferlin C2 domain first repeat in Ferlin Back     alignment and domain information
>cd04036 C2_cPLA2 C2 domain present in cytosolic PhosphoLipase A2 (cPLA2) Back     alignment and domain information
>cd08395 C2C_Munc13 C2 domain third repeat in Munc13 (mammalian uncoordinated) proteins Back     alignment and domain information
>cd04050 C2B_Synaptotagmin-like C2 domain second repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>cd08375 C2_Intersectin C2 domain present in Intersectin Back     alignment and domain information
>cd08381 C2B_PI3K_class_II C2 domain second repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>cd08394 C2A_Munc13 C2 domain first repeat in Munc13 (mammalian uncoordinated) proteins Back     alignment and domain information
>cd08688 C2_KIAA0528-like C2 domain found in the Human KIAA0528 cDNA clone Back     alignment and domain information
>cd04028 C2B_RIM1alpha C2 domain second repeat contained in Rab3-interacting molecule (RIM) proteins Back     alignment and domain information
>cd08685 C2_RGS-like C2 domain of the Regulator Of G-Protein Signaling (RGS) family Back     alignment and domain information
>cd08677 C2A_Synaptotagmin-13 C2 domain Back     alignment and domain information
>cd04045 C2C_Tricalbin-like C2 domain third repeat present in Tricalbin-like proteins Back     alignment and domain information
>cd08382 C2_Smurf-like C2 domain present in Smad ubiquitination-related factor (Smurf)-like proteins Back     alignment and domain information
>cd04018 C2C_Ferlin C2 domain third repeat in Ferlin Back     alignment and domain information
>cd04010 C2B_RasA3 C2 domain second repeat present in RAS p21 protein activator 3 (RasA3) Back     alignment and domain information
>cd04027 C2B_Munc13 C2 domain second repeat in Munc13 (mammalian uncoordinated) proteins Back     alignment and domain information
>cd04051 C2_SRC2_like C2 domain present in Soybean genes Regulated by Cold 2 (SRC2)-like proteins Back     alignment and domain information
>cd08387 C2A_Synaptotagmin-8 C2A domain first repeat present in Synaptotagmin 8 Back     alignment and domain information
>cd04029 C2A_SLP-4_5 C2 domain first repeat present in Synaptotagmin-like proteins 4 and 5 Back     alignment and domain information
>cd04039 C2_PSD C2 domain present in Phosphatidylserine decarboxylase (PSD) Back     alignment and domain information
>cd04017 C2D_Ferlin C2 domain fourth repeat in Ferlin Back     alignment and domain information
>cd08385 C2A_Synaptotagmin-1-5-6-9-10 C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10 Back     alignment and domain information
>cd04041 C2A_fungal C2 domain first repeat; fungal group Back     alignment and domain information
>cd08393 C2A_SLP-1_2 C2 domain first repeat present in Synaptotagmin-like proteins 1 and 2 Back     alignment and domain information
>cd08383 C2A_RasGAP C2 domain (first repeat) of Ras GTPase activating proteins (GAPs) Back     alignment and domain information
>cd08676 C2A_Munc13-like C2 domain first repeat in Munc13 (mammalian uncoordinated)-like proteins Back     alignment and domain information
>cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene Back     alignment and domain information
>cd04043 C2_Munc13_fungal C2 domain in Munc13 (mammalian uncoordinated) proteins; fungal group Back     alignment and domain information
>cd04030 C2C_KIAA1228 C2 domain third repeat present in uncharacterized human KIAA1228-like proteins Back     alignment and domain information
>cd04052 C2B_Tricalbin-like C2 domain second repeat present in Tricalbin-like proteins Back     alignment and domain information
>cd04040 C2D_Tricalbin-like C2 domain fourth repeat present in Tricalbin-like proteins Back     alignment and domain information
>cd08690 C2_Freud-1 C2 domain found in 5' repressor element under dual repression binding protein-1 (Freud-1) Back     alignment and domain information
>cd08392 C2A_SLP-3 C2 domain first repeat present in Synaptotagmin-like protein 3 Back     alignment and domain information
>cd04031 C2A_RIM1alpha C2 domain first repeat contained in Rab3-interacting molecule (RIM) proteins Back     alignment and domain information
>cd04011 C2B_Ferlin C2 domain second repeat in Ferlin Back     alignment and domain information
>cd08680 C2_Kibra C2 domain found in Human protein Kibra Back     alignment and domain information
>cd08386 C2A_Synaptotagmin-7 C2A domain first repeat present in Synaptotagmin 7 Back     alignment and domain information
>cd08521 C2A_SLP C2 domain first repeat present in Synaptotagmin-like proteins Back     alignment and domain information
>cd08384 C2B_Rabphilin_Doc2 C2 domain second repeat present in Rabphilin and Double C2 domain Back     alignment and domain information
>cd08407 C2B_Synaptotagmin-13 C2 domain second repeat present in Synaptotagmin 13 Back     alignment and domain information
>cd08388 C2A_Synaptotagmin-4-11 C2A domain first repeat present in Synaptotagmins 4 and 11 Back     alignment and domain information
>cd08404 C2B_Synaptotagmin-4 C2 domain second repeat present in Synaptotagmin 4 Back     alignment and domain information
>cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP) Back     alignment and domain information
>cd04032 C2_Perforin C2 domain of Perforin Back     alignment and domain information
>cd08406 C2B_Synaptotagmin-12 C2 domain second repeat present in Synaptotagmin 12 Back     alignment and domain information
>cd08390 C2A_Synaptotagmin-15-17 C2A domain first repeat present in Synaptotagmins 15 and 17 Back     alignment and domain information
>cd04020 C2B_SLP_1-2-3-4 C2 domain second repeat present in Synaptotagmin-like proteins 1-4 Back     alignment and domain information
>cd08675 C2B_RasGAP C2 domain second repeat of Ras GTPase activating proteins (GAPs) Back     alignment and domain information
>cd08389 C2A_Synaptotagmin-14_16 C2A domain first repeat present in Synaptotagmins 14 and 16 Back     alignment and domain information
>cd00275 C2_PLC_like C2 domain present in Phosphoinositide-specific phospholipases C (PLC) Back     alignment and domain information
>cd08403 C2B_Synaptotagmin-3-5-6-9-10 C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10 Back     alignment and domain information
>cd08402 C2B_Synaptotagmin-1 C2 domain second repeat present in Synaptotagmin 1 Back     alignment and domain information
>cd08405 C2B_Synaptotagmin-7 C2 domain second repeat present in Synaptotagmin 7 Back     alignment and domain information
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] Back     alignment and domain information
>cd00276 C2B_Synaptotagmin C2 domain second repeat present in Synaptotagmin Back     alignment and domain information
>cd08692 C2B_Tac2-N C2 domain second repeat found in Tac2-N (Tandem C2 protein in Nucleus) Back     alignment and domain information
>cd04021 C2_E3_ubiquitin_ligase C2 domain present in E3 ubiquitin ligase Back     alignment and domain information
>cd04026 C2_PKC_alpha_gamma C2 domain in Protein Kinase C (PKC) alpha and gamma Back     alignment and domain information
>cd08686 C2_ABR C2 domain in the Active BCR (Breakpoint cluster region) Related protein Back     alignment and domain information
>cd08410 C2B_Synaptotagmin-17 C2 domain second repeat present in Synaptotagmin 17 Back     alignment and domain information
>PHA02820 phospholipase-D-like protein; Provisional Back     alignment and domain information
>cd08691 C2_NEDL1-like C2 domain present in NEDL1 (NEDD4-like ubiquitin protein ligase-1) Back     alignment and domain information
>cd00138 PLDc Phospholipase D Back     alignment and domain information
>cd08409 C2B_Synaptotagmin-15 C2 domain second repeat present in Synaptotagmin 15 Back     alignment and domain information
>cd04009 C2B_Munc13-like C2 domain second repeat in Munc13 (mammalian uncoordinated)-like proteins Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>cd04048 C2A_Copine C2 domain first repeat in Copine Back     alignment and domain information
>cd08408 C2B_Synaptotagmin-14_16 C2 domain second repeat present in Synaptotagmins 14 and 16 Back     alignment and domain information
>cd04037 C2E_Ferlin C2 domain fifth repeat in Ferlin Back     alignment and domain information
>cd04035 C2A_Rabphilin_Doc2 C2 domain first repeat present in Rabphilin and Double C2 domain Back     alignment and domain information
>KOG3603 consensus Predicted phospholipase D [General function prediction only] Back     alignment and domain information
>cd00138 PLDc Phospholipase D Back     alignment and domain information
>PRK12452 cardiolipin synthetase; Reviewed Back     alignment and domain information
>PRK13912 nuclease NucT; Provisional Back     alignment and domain information
>PRK13912 nuclease NucT; Provisional Back     alignment and domain information
>PHA03003 palmytilated EEV membrane glycoprotein; Provisional Back     alignment and domain information
>cd04047 C2B_Copine C2 domain second repeat in Copine Back     alignment and domain information
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] Back     alignment and domain information
>PF13091 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 1BYR_A 1V0T_A 1V0U_A 1V0V_A 1V0S_A 1V0R_A 1V0W_A Back     alignment and domain information
>PF00168 C2: C2 domain; InterPro: IPR000008 The C2 domain is a Ca2+-dependent membrane-targeting module found in many cellular proteins involved in signal transduction or membrane trafficking Back     alignment and domain information
>PLN02223 phosphoinositide phospholipase C Back     alignment and domain information
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>cd00030 C2 C2 domain Back     alignment and domain information
>COG5038 Ca2+-dependent lipid-binding protein, contains C2 domain [General function prediction only] Back     alignment and domain information
>smart00239 C2 Protein kinase C conserved region 2 (CalB) Back     alignment and domain information
>PLN02952 phosphoinositide phospholipase C Back     alignment and domain information
>PF13091 PLDc_2: PLD-like domain; PDB: 2ZE4_A 2ZE9_A 1BYS_A 1BYR_A 1V0T_A 1V0U_A 1V0V_A 1V0S_A 1V0R_A 1V0W_A Back     alignment and domain information
>PLN02230 phosphoinositide phospholipase C 4 Back     alignment and domain information
>PRK01642 cls cardiolipin synthetase; Reviewed Back     alignment and domain information
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] Back     alignment and domain information
>PLN02222 phosphoinositide phospholipase C 2 Back     alignment and domain information
>PLN02228 Phosphoinositide phospholipase C Back     alignment and domain information
>cd08374 C2F_Ferlin C2 domain sixth repeat in Ferlin Back     alignment and domain information
>cd08689 C2_fungal_Pkc1p C2 domain found in protein kinase C (Pkc1p) in Saccharomyces cerevisiae Back     alignment and domain information
>KOG1028 consensus Ca2+-dependent phospholipid-binding protein Synaptotagmin, required for synaptic vesicle and secretory granule exocytosis [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PRK11263 cardiolipin synthase 2; Provisional Back     alignment and domain information
>PRK05443 polyphosphate kinase; Provisional Back     alignment and domain information
>PF00614 PLDc: Phospholipase D Active site motif; InterPro: IPR001736 Phosphatidylcholine-hydrolysing phospholipase D (PLD) isoforms are activated by ADP-ribosylation factors (ARFs) Back     alignment and domain information
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism] Back     alignment and domain information
>KOG1031 consensus Predicted Ca2+-dependent phospholipid-binding protein [General function prediction only] Back     alignment and domain information
>PRK09428 pssA phosphatidylserine synthase; Provisional Back     alignment and domain information
>KOG3603 consensus Predicted phospholipase D [General function prediction only] Back     alignment and domain information
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] Back     alignment and domain information
>smart00155 PLDc Phospholipase D Back     alignment and domain information
>KOG1328 consensus Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] Back     alignment and domain information
>COG1502 Cls Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes [Lipid metabolism] Back     alignment and domain information
>PF00614 PLDc: Phospholipase D Active site motif; InterPro: IPR001736 Phosphatidylcholine-hydrolysing phospholipase D (PLD) isoforms are activated by ADP-ribosylation factors (ARFs) Back     alignment and domain information
>cd08683 C2_C2cd3 C2 domain found in C2 calcium-dependent domain containing 3 (C2cd3) proteins Back     alignment and domain information
>KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] Back     alignment and domain information
>KOG3964 consensus Phosphatidylglycerolphosphate synthase [Lipid transport and metabolism] Back     alignment and domain information
>TIGR03705 poly_P_kin polyphosphate kinase 1 Back     alignment and domain information
>KOG0905 consensus Phosphoinositide 3-kinase [Signal transduction mechanisms] Back     alignment and domain information
>smart00155 PLDc Phospholipase D Back     alignment and domain information
>KOG1011 consensus Neurotransmitter release regulator, UNC-13 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PLN02964 phosphatidylserine decarboxylase Back     alignment and domain information
>PLN02866 phospholipase D Back     alignment and domain information
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13918 PLDc_3: PLD-like domain Back     alignment and domain information
>KOG1013 consensus Synaptic vesicle protein rabphilin-3A [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism] Back     alignment and domain information
>KOG2060 consensus Rab3 effector RIM1 and related proteins, contain PDZ and C2 domains [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13918 PLDc_3: PLD-like domain Back     alignment and domain information
>KOG1326 consensus Membrane-associated protein FER-1 and related ferlins, contain multiple C2 domains [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>cd08684 C2A_Tac2-N C2 domain first repeat found in Tac2-N (Tandem C2 protein in Nucleus) Back     alignment and domain information
>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function Back     alignment and domain information
>KOG1327 consensus Copine [Signal transduction mechanisms] Back     alignment and domain information
>COG0855 Ppk Polyphosphate kinase [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3837 consensus Uncharacterized conserved protein, contains DM14 and C2 domains [General function prediction only] Back     alignment and domain information
>PLN02352 phospholipase D epsilon Back     alignment and domain information
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen [] Back     alignment and domain information
>PF13090 PP_kinase_C: Polyphosphate kinase C-terminal domain; PDB: 2O8R_A 1XDP_A 1XDO_B Back     alignment and domain information
>PF12416 DUF3668: Cep120 protein; InterPro: IPR022136 This domain family is found in eukaryotes, and is typically between 75 and 114 amino acids in length Back     alignment and domain information
>PF11495 Regulator_TrmB: Archaeal transcriptional regulator TrmB; InterPro: IPR021586 TrmB is an alpha-glucoside sensing transcriptional regulator Back     alignment and domain information
>cd08398 C2_PI3K_class_I_alpha C2 domain present in class I alpha phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>KOG1329 consensus Phospholipase D1 [Lipid transport and metabolism] Back     alignment and domain information
>COG3886 Predicted HKD family nuclease [DNA replication, recombination, and repair] Back     alignment and domain information
>cd08693 C2_PI3K_class_I_beta_delta C2 domain present in class I beta and delta phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>PLN03008 Phospholipase D delta Back     alignment and domain information
>PLN02270 phospholipase D alpha Back     alignment and domain information
>PF15627 CEP76-C2: CEP76 C2 domain Back     alignment and domain information
>KOG1452 consensus Predicted Rho GTPase-activating protein [Signal transduction mechanisms] Back     alignment and domain information
>cd08397 C2_PI3K_class_III C2 domain present in class III phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>cd04012 C2A_PI3K_class_II C2 domain first repeat present in class II phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>cd08380 C2_PI3K_like C2 domain present in phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>PF15625 CC2D2AN-C2: CC2D2A N-terminal C2 domain Back     alignment and domain information
>cd08687 C2_PKN-like C2 domain in Protein kinase C-like (PKN) proteins Back     alignment and domain information
>PF00792 PI3K_C2: Phosphoinositide 3-kinase C2; InterPro: IPR002420 Phosphatidylinositol 3-kinase (PI3-kinase) (2 Back     alignment and domain information
>cd08695 C2_Dock-B C2 domains found in Dedicator Of CytoKinesis (Dock) class B proteins Back     alignment and domain information
>cd08399 C2_PI3K_class_I_gamma C2 domain present in class I gamma phosphatidylinositol 3-kinases (PI3Ks) Back     alignment and domain information
>cd08694 C2_Dock-A C2 domains found in Dedicator Of CytoKinesis (Dock) class A proteins Back     alignment and domain information
>PF13090 PP_kinase_C: Polyphosphate kinase C-terminal domain; PDB: 2O8R_A 1XDP_A 1XDO_B Back     alignment and domain information
>PF14429 DOCK-C2: C2 domain in Dock180 and Zizimin proteins; PDB: 3L4C_A Back     alignment and domain information
>PF11618 DUF3250: Protein of unknown function (DUF3250); InterPro: IPR021656 This family of proteins represents a protein with unknown function Back     alignment and domain information
>KOG4269 consensus Rac GTPase-activating protein BCR/ABR [Signal transduction mechanisms] Back     alignment and domain information
>KOG1327 consensus Copine [Signal transduction mechanisms] Back     alignment and domain information
>smart00142 PI3K_C2 Phosphoinositide 3-kinase, region postulated to contain C2 domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query839
2fk9_A157 Protein kinase C, ETA type; ATP-binding, metal-bin 1e-23
1wfj_A136 Putative elicitor-responsive gene; C2 domain, rike 2e-19
1gmi_A136 Protein kinase C, epsilon type; PKC, C2 domain, X- 5e-19
1v0w_A506 Phospholipase D; hydrolase, substrate SOAK, dibuty 6e-17
2dmh_A140 Myoferlin; beta-sandwich, FER-1-like protein 3, mu 1e-16
2ep6_A133 MCTP2 protein; beta sandwich, Ca2+ binding, membra 5e-16
1rlw_A126 Phospholipase A2, CALB domain; hydrolase, C2 domai 6e-16
2nq3_A173 Itchy homolog E3 ubiquitin protein ligase; C2 doma 2e-14
3b7y_A153 E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- 3e-14
3m7f_B176 E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 4e-14
3kwu_A148 MUNC13-1; calcium binding protein, phospholipid bi 2e-11
2r83_A284 Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel 5e-11
2r83_A284 Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel 7e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
3pyc_A132 E3 ubiquitin-protein ligase smurf1; phospholipid b 7e-10
1cjy_A749 CPLA2, protein (cytosolic phospholipase A2); lipid 7e-09
3rdl_A137 Protein kinase C alpha type; protein kinase PKC, t 9e-09
2cjt_A131 UNC-13 homolog A, MUNC13-1; phorbol-ester binding, 1e-08
3fbk_A153 RGS3, RGP3, regulator of G-protein signaling 3; al 2e-08
3f04_A143 Synaptotagmin-1; C2A, calcium, cell junction, cyto 3e-08
1a25_A149 CALB, protein kinase C (beta); calcium++/phospholi 3e-08
1dqv_A296 Synaptotagmin III; beta sandwich, calcium ION, C2 4e-08
1dqv_A296 Synaptotagmin III; beta sandwich, calcium ION, C2 7e-07
1rsy_A152 Synaptotagmin I; calcium/phospholipid binding prot 5e-08
3bxj_A483 RAS GTPase-activating protein syngap; GTPase activ 1e-07
2z0u_A155 WW domain-containing protein 1; C2 domain, alterna 2e-07
2cjs_A167 UNC-13 homolog A, MUNC13-1; neurotransmitter trans 2e-07
1rh8_A142 Piccolo protein; beta-sandwich, metal binding prot 4e-07
3fdw_A148 Synaptotagmin-like protein 4; structural genomics, 4e-07
2chd_A142 Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium 1e-06
1v27_A141 Regulating synaptic membrane exocytosis protein 2; 1e-06
2dmg_A142 KIAA1228 protein; beta-sandwich, structural genomi 2e-06
1ugk_A138 Synaptotagmin IV, KIAA1342; beta sandwich, structu 3e-06
2bwq_A129 Regulating synaptic membrane exocytosis protein 2; 3e-06
2q3x_A171 Regulating synaptic membrane exocytosis protein 1; 4e-06
2d8k_A141 Synaptotagmin VII; exocytosis, calcium binding, ly 4e-06
2enp_A147 B/K protein; C2 type 1,beta sandwich, structural g 5e-06
1w15_A153 Synaptotagmin IV; metal binding protein, endocytos 5e-06
1tjx_A159 Similar to synaptotagmini/P65; C2B domain, calcium 7e-06
3n5a_A138 Synaptotagmin-7; calcium/phospholipid binding prot 9e-06
1wfm_A138 Synaptotagmin XIII; C2 domain, exocytosis, neurotr 3e-05
3hsi_A458 Phosphatidylserine synthase; CDP- diacylglycerol-- 6e-05
2cm5_A166 Rabphilin-3A; protein transport, zinc-finger, Ca2+ 1e-04
2b3r_A134 Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA 2e-04
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 5e-04
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Length = 157 Back     alignment and structure
 Score = 97.4 bits (242), Expect = 1e-23
 Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 10/151 (6%)

Query: 13  SDSFNGQNMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKI 72
           S   +  +  +VP    S   +  +G L + I  A  L              +       
Sbjct: 4   SHHHHHHSSGLVPRGSMSSGTMKFNGYLRVRIGEAVGLQPTRWS-----LRHSLFKKGHQ 58

Query: 73  TSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGS-ELI 131
             DPY+T++V    VG+T     +  P + + F   V      +   V     +G    +
Sbjct: 59  LLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANV-TDGGHLELAVFHETPLGYDHFV 117

Query: 132 GTVAIPVEQIYSGGKVEGTYPV---LNGSGK 159
               +  +++        T+     L   GK
Sbjct: 118 ANCTLQFQELLRTTGASDTFEGWVDLEPEGK 148
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Length = 136 Back     alignment and structure
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Length = 136 Back     alignment and structure
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Length = 506 Back     alignment and structure
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 140 Back     alignment and structure
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Length = 133 Back     alignment and structure
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Length = 126 Back     alignment and structure
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Length = 173 Back     alignment and structure
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Length = 153 Back     alignment and structure
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Length = 176 Back     alignment and structure
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} PDB: 3kwt_A* Length = 148 Back     alignment and structure
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 Back     alignment and structure
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Length = 284 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Length = 132 Back     alignment and structure
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Length = 749 Back     alignment and structure
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Length = 131 Back     alignment and structure
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} Length = 153 Back     alignment and structure
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Length = 143 Back     alignment and structure
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Length = 149 Back     alignment and structure
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 Back     alignment and structure
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Length = 296 Back     alignment and structure
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Length = 152 Back     alignment and structure
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Length = 483 Back     alignment and structure
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Length = 155 Back     alignment and structure
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Length = 167 Back     alignment and structure
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Length = 142 Back     alignment and structure
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Length = 148 Back     alignment and structure
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Length = 142 Back     alignment and structure
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 141 Back     alignment and structure
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 142 Back     alignment and structure
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 Back     alignment and structure
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Length = 129 Back     alignment and structure
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Length = 171 Back     alignment and structure
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 141 Back     alignment and structure
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 147 Back     alignment and structure
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Length = 153 Back     alignment and structure
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Length = 159 Back     alignment and structure
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Length = 138 Back     alignment and structure
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Length = 138 Back     alignment and structure
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Length = 458 Back     alignment and structure
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Length = 166 Back     alignment and structure
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Length = 134 Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Length = 155 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query839
1v0w_A506 Phospholipase D; hydrolase, substrate SOAK, dibuty 100.0
3hsi_A458 Phosphatidylserine synthase; CDP- diacylglycerol-- 100.0
1xdp_A687 Polyphosphate kinase; PPK, PPK complex with AMPPNP 99.88
2fk9_A157 Protein kinase C, ETA type; ATP-binding, metal-bin 99.86
2o8r_A705 Polyphosphate kinase; structural genomics, protein 99.86
2ep6_A133 MCTP2 protein; beta sandwich, Ca2+ binding, membra 99.81
1wfj_A136 Putative elicitor-responsive gene; C2 domain, rike 99.8
2dmh_A140 Myoferlin; beta-sandwich, FER-1-like protein 3, mu 99.79
3kwu_A148 MUNC13-1; calcium binding protein, phospholipid bi 99.79
3b7y_A153 E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL- 99.79
1gmi_A136 Protein kinase C, epsilon type; PKC, C2 domain, X- 99.79
3m7f_B176 E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB1 99.76
1rlw_A126 Phospholipase A2, CALB domain; hydrolase, C2 domai 99.75
2nq3_A173 Itchy homolog E3 ubiquitin protein ligase; C2 doma 99.74
3pyc_A132 E3 ubiquitin-protein ligase smurf1; phospholipid b 99.73
2b3r_A134 Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA 99.68
1rsy_A152 Synaptotagmin I; calcium/phospholipid binding prot 99.66
3fdw_A148 Synaptotagmin-like protein 4; structural genomics, 99.66
3f04_A143 Synaptotagmin-1; C2A, calcium, cell junction, cyto 99.65
2d8k_A141 Synaptotagmin VII; exocytosis, calcium binding, ly 99.65
2bwq_A129 Regulating synaptic membrane exocytosis protein 2; 99.65
2z0u_A155 WW domain-containing protein 1; C2 domain, alterna 99.65
3fbk_A153 RGS3, RGP3, regulator of G-protein signaling 3; al 99.65
4ggj_A196 Mitochondrial cardiolipin hydrolase; piRNA pathway 99.64
2q3x_A171 Regulating synaptic membrane exocytosis protein 1; 99.64
3rdl_A137 Protein kinase C alpha type; protein kinase PKC, t 99.64
1a25_A149 CALB, protein kinase C (beta); calcium++/phospholi 99.64
1rh8_A142 Piccolo protein; beta-sandwich, metal binding prot 99.64
1wfm_A138 Synaptotagmin XIII; C2 domain, exocytosis, neurotr 99.64
1v27_A141 Regulating synaptic membrane exocytosis protein 2; 99.64
2r83_A284 Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel 99.63
2dmg_A142 KIAA1228 protein; beta-sandwich, structural genomi 99.62
1w15_A153 Synaptotagmin IV; metal binding protein, endocytos 99.62
2chd_A142 Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium 99.61
3n5a_A138 Synaptotagmin-7; calcium/phospholipid binding prot 99.61
1ugk_A138 Synaptotagmin IV, KIAA1342; beta sandwich, structu 99.6
2cjt_A131 UNC-13 homolog A, MUNC13-1; phorbol-ester binding, 99.6
2enp_A147 B/K protein; C2 type 1,beta sandwich, structural g 99.59
2cm5_A166 Rabphilin-3A; protein transport, zinc-finger, Ca2+ 99.59
1tjx_A159 Similar to synaptotagmini/P65; C2B domain, calcium 99.59
3l9b_A144 Otoferlin; C2-domain, beta-sheets, cell membrane, 99.58
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 99.55
2cjs_A167 UNC-13 homolog A, MUNC13-1; neurotransmitter trans 99.52
1dqv_A296 Synaptotagmin III; beta sandwich, calcium ION, C2 99.51
1byr_A155 Protein (endonuclease); phosphodiesterase,; 2.00A 99.5
4gel_A220 Mitochondrial cardiolipin hydrolase; piRNA, phosph 99.49
3bxj_A483 RAS GTPase-activating protein syngap; GTPase activ 99.49
1djx_A624 PLC-D1, phosphoinositide-specific phospholipase C, 99.48
3jzy_A510 Intersectin 2; C2 domain, structural genomics cons 99.48
4ggj_A196 Mitochondrial cardiolipin hydrolase; piRNA pathway 99.48
3nsj_A540 Perforin-1; pore forming protein, immune system; H 99.47
1cjy_A749 CPLA2, protein (cytosolic phospholipase A2); lipid 99.38
2r83_A284 Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cel 99.36
1dqv_A296 Synaptotagmin III; beta sandwich, calcium ION, C2 99.29
3qr0_A816 Phospholipase C-beta (PLC-beta); PH domain, EF han 99.23
1xdp_A687 Polyphosphate kinase; PPK, PPK complex with AMPPNP 99.21
3ohm_B885 1-phosphatidylinositol-4,5-bisphosphate phosphodi 99.19
2zkm_X799 1-phosphatidylinositol-4,5-bisphosphate phosphodie 99.17
3pfq_A674 PKC-B, PKC-beta, protein kinase C beta type; phosp 99.13
4gel_A220 Mitochondrial cardiolipin hydrolase; piRNA, phosph 99.11
1yrk_A126 NPKC-delta, protein kinase C, delta type; C2 domai 98.97
2enj_A138 NPKC-theta, protein kinase C theta type; beta-sand 98.94
3hsi_A 458 Phosphatidylserine synthase; CDP- diacylglycerol-- 98.85
1v0w_A 506 Phospholipase D; hydrolase, substrate SOAK, dibuty 98.64
2o8r_A 705 Polyphosphate kinase; structural genomics, protein 98.31
3qph_A342 TRMB, A global transcription regulator; transcript 96.26
3qph_A342 TRMB, A global transcription regulator; transcript 94.49
2f5t_X233 Archaeal transcriptional regulator TRMB; sugar-bin 92.83
2c1l_A 358 Restriction endonuclease; BFII, domain fusion, hyd 85.32
2yrb_A156 Protein fantom; beta sandwich, NPPSFA, national pr 82.73
2wxf_A940 Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca 82.31
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Back     alignment and structure
Probab=100.00  E-value=2.6e-36  Score=350.21  Aligned_cols=381  Identities=15%  Similarity=0.125  Sum_probs=201.4

Q ss_pred             hhHHHHHHHHHhcccccEEEEEecccceeEecCCCCCCcchHHHHHHhhhcCC--CeEEEEEecCCcccccccccccccc
Q 003210          236 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEG--VRVLLLVWDDPTSRSILGYKMDGVM  313 (839)
Q Consensus       236 ~~f~~l~~aI~~A~~~I~I~~w~~~~~~~l~r~~~~~~~~~l~~lL~~kA~~G--V~VriLvwd~~~s~~~~~~~~~~~~  313 (839)
                      ++|++|+++|++||++|+|++|.+      ++++.  .+.+|.++|++||+||  |+||||+ |+.++.....       
T Consensus        66 ~~~~~l~~~I~~Ak~~I~i~~y~~------~~~d~--~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~~-------  129 (506)
T 1v0w_A           66 RLLAKMTENIGNATRTVDISTLAP------FPNGA--FQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMNV-------  129 (506)
T ss_dssp             HHHHHHHHHHHTCSSEEEEEEESS------CCCHH--HHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCCC-------
T ss_pred             HHHHHHHHHHHHhccEEEEEEeec------cCCCh--HHHHHHHHHHHHHhCCCCcEEEEEE-eCcccccccc-------
Confidence            479999999999999999999973      12222  4678999999999999  9999997 6644321100       


Q ss_pred             ccCcHHHHhhhcCCCc------EEEeccCccCccccccccccccceecccceEEEEecCCCCCCccEEEEEccccCCCCC
Q 003210          314 QTHDEETRRVFKHSSV------KVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGR  387 (839)
Q Consensus       314 ~~~~~~~~~~~~~~~v------~v~~~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dl~~~r  387 (839)
                        ......+.|+..|+      .+... .       +.. . ...+.+||+|++|||++        +||+||+|+++++
T Consensus       130 --~~~~~~~~L~~~g~~~~~~~~~~~~-~-------~~~-~-~~~~~r~H~K~~ViD~~--------~a~~Gg~Nl~~d~  189 (506)
T 1v0w_A          130 --IPSKYRDELTAKLGKAAENITLNVA-S-------MTT-S-KTAFSWNHSKILVVDGQ--------SALTGGINSWKDD  189 (506)
T ss_dssp             --HHHHHHHHHHHHHGGGGGGEEEEEE-E-------ECS-B-TTTTBCBCCCEEEETTT--------EEEEESCCCCHHH
T ss_pred             --CCHHHHHHHHhcccceeecCccccc-c-------ccc-c-CCccccceeeEEEECCc--------EEEeeccccCccc
Confidence              01123333443333      22210 0       000 0 00124899999999997        9999999998766


Q ss_pred             CCCCCCCCccccccccCCCCCCCcccCCCCCCCCCCeeeeeeeeeChHHHHHHHHHHHHHhhhcCCC-CcccCCCCchhh
Q 003210          388 YDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPH-GIKKLKSGDDAL  466 (839)
Q Consensus       388 ~Dt~~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~~pWhDv~~~i~Gpaa~dl~~~F~~rW~~~~~~~-~~~~l~~~~~~~  466 (839)
                      |.+.                             ..+|||++++|+||+|.++...|.++|+...... .+..+. .... 
T Consensus       190 y~~~-----------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~~~~~~~~~~-~~~~-  238 (506)
T 1v0w_A          190 YLDT-----------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKSNIASVW-FAAS-  238 (506)
T ss_dssp             HTSS-----------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTTTSTTTEE-EEES-
T ss_pred             cccC-----------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhccccCChhhhc-cccc-
Confidence            6431                             1479999999999999999999999999764210 000000 0000 


Q ss_pred             hhcccCCCCcCCCCCCCCCCCCCCcceeeEeeeccCcccCCCCCCcch-----hcccccccCCcc--------cchhHHH
Q 003210          467 LRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKE-----ATSKNLVCGKNV--------LIDMSIH  533 (839)
Q Consensus       467 ~~~~~~p~~~~~~~~~~~~~~~~~~~~vQv~rs~~~~~~~~~p~~p~~-----~~~~~~~~g~~~--------~~e~sI~  533 (839)
                      ...+..+.... ...|.. ....+...+|+...+........|..+..     +....+..+...        ..+.+|.
T Consensus       239 ~~~~~~~~~~~-~~~p~~-~~~~~~~~~~~~~~~~~~i~~~~P~~~~~~~~w~~~~~~~~~d~P~~~~~~~~~~~~~~~~  316 (506)
T 1v0w_A          239 GNAGCMPTMHK-DTNPKA-SPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPEE  316 (506)
T ss_dssp             TTCCCCTTHHH-HHSCSS-CCCCSSEEEEEEECCCSSSCSCCTTCCCCCCCCCCSSSCSSTTCCCTTTSCHHHHHHCHHH
T ss_pred             cccccCchhcc-ccCccc-CcccccccceecccccceeecCCccccccccCcccccceeeccccccccCcccccccccHH
Confidence            00000000000 000000 00112223332221111111111211000     000000000000        0135799


Q ss_pred             HHHHHHHHhccceEEEeecccccccCCcccccccCCCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCchhhHHH
Q 003210          534 TAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQRI  613 (839)
Q Consensus       534 ~ayl~~I~~A~~~IyIenqYFi~~~~~~~~~~~~~~~n~i~~~ia~~ia~~~~~~~g~~V~ivlP~~peg~~~~~~~~~i  613 (839)
                      ++|+++|.+||++|||++|||.+-....         ..+...+..+|.+|.  .+||+|+||+|..++...        
T Consensus       317 ~~~~~~I~~A~~~I~I~tq~~~pyf~p~---------~~~~~~i~~aL~~Aa--~rGV~VrIl~~~~~~~~~--------  377 (506)
T 1v0w_A          317 SALRALVASAKGHIEISQQDLNATCPPL---------PRYDIRLYDALAAKM--AAGVKVRIVVSDPANRGA--------  377 (506)
T ss_dssp             HHHHHHHHTCSSEEEEEESCSSCCTTTS---------CSCCHHHHHHHHHHH--HTTCEEEEEECCGGGCC---------
T ss_pred             HHHHHHHhCcCcEEEEEeccccccccCc---------ccchHHHHHHHHHHH--hCCCcEEEEeCCCCchHH--------
Confidence            9999999999999999996655321000         001235777777764  589999999998653211        


Q ss_pred             HHHHHHH-HHHHHH---H--HHHHHHHcCcCCCCC--ccCceeeeecCccccccccCCCCCCCCCCCCChhhhcccCcee
Q 003210          614 LFWQHKT-MQMMYE---T--IYKALVEVGLEGAFS--PQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRF  685 (839)
Q Consensus       614 ~~~~~~t-~~~~~~---~--~~~~L~~~G~~~~~~--p~~y~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  685 (839)
                      +.+.... +..+..   .  .--.|.+.|+.. ..  +..-+.++.++....   +...                  ...
T Consensus       378 ~~~a~~~~~~~L~~~~~~l~~gv~ll~~g~~e-~~~~~~~~l~i~~~~~~~~---~~~~------------------~~~  435 (506)
T 1v0w_A          378 VGSGGYSQIKSLSEISDTLRNRLANITGGQQA-AKTAMCSNLQLATFRSSPN---GKWA------------------DGH  435 (506)
T ss_dssp             -----CCCCSCTHHHHHHHHHHHHHHHTSHHH-HHHHHHHHEEEEECCSSSS---SSCT------------------TSC
T ss_pred             HHHhHHHHHHHHHHhhhhhcccchhcccccch-hccccccceeeeeccccCc---cccc------------------cCc
Confidence            1111000 000000   0  001122223100 00  000011111110000   0000                  001


Q ss_pred             eEEEeeeEEEEeeeEEEEeccccCCCCCCCCCCcceEEeeecchhh
Q 003210          686 MIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT  731 (839)
Q Consensus       686 ~iyvHSKlmIVDD~~~iIGSANln~RSm~g~~DsEi~v~i~d~~~~  731 (839)
                      ..++|+|+|||||++++|||+|||.|||     +|+++.++++++.
T Consensus       436 ~~~lHaK~~vvD~~~~~vGS~N~d~rS~-----~E~~l~i~~~~~a  476 (506)
T 1v0w_A          436 PYAQHHKLVSVDSSTFYIGSKNLYPSWL-----QDFGYIVESPEAA  476 (506)
T ss_dssp             CCCBCCEEEEETTTEEEEESCCSSCCCS-----BCEEEEEECHHHH
T ss_pred             cccceEEEEEECCcEEEEeCCCCCCcch-----hhceeEecCHHHH
Confidence            2589999999999999999999999999     3999999998753
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Back     alignment and structure
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A* Back     alignment and structure
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens} Back     alignment and structure
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 Back     alignment and structure
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1 Back     alignment and structure
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2 Back     alignment and structure
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A* Back     alignment and structure
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A Back     alignment and structure
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1 Back     alignment and structure
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus} Back     alignment and structure
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1 Back     alignment and structure
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1 Back     alignment and structure
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A Back     alignment and structure
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus} Back     alignment and structure
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2 Back     alignment and structure
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens} Back     alignment and structure
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A* Back     alignment and structure
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Back     alignment and structure
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2 Back     alignment and structure
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens} Back     alignment and structure
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0 Back     alignment and structure
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A Back     alignment and structure
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus} Back     alignment and structure
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2 Back     alignment and structure
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2 Back     alignment and structure
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A Back     alignment and structure
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A Back     alignment and structure
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus} Back     alignment and structure
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1 Back     alignment and structure
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Back     alignment and structure
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A Back     alignment and structure
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A* Back     alignment and structure
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus} Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Back     alignment and structure
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1 Back     alignment and structure
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Back     alignment and structure
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A Back     alignment and structure
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A Back     alignment and structure
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus} Back     alignment and structure
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Back     alignment and structure
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B Back     alignment and structure
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A Back     alignment and structure
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus} Back     alignment and structure
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A Back     alignment and structure
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2 Back     alignment and structure
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A Back     alignment and structure
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Back     alignment and structure
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A* Back     alignment and structure
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Back     alignment and structure
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Back     alignment and structure
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Back     alignment and structure
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A Back     alignment and structure
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A Back     alignment and structure
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens} Back     alignment and structure
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae} Back     alignment and structure
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A* Back     alignment and structure
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 Back     alignment and structure
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus} Back     alignment and structure
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus} Back     alignment and structure
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5 Back     alignment and structure
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus} Back     alignment and structure
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1 Back     alignment and structure
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 839
d1wfja_136 b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cr 1e-15
d1v0wa1258 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces 1e-11
d1rsya_143 b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu 4e-11
d1rlwa_126 b.7.1.1 (A:) Domain from cytosolic phospholipase A 1e-10
d1a25a_132 b.7.1.2 (A:) C2 domain from protein kinase c (beta 2e-10
d1gmia_136 b.7.1.1 (A:) Domain from protein kinase C epsilon 7e-10
d1qasa2131 b.7.1.1 (A:626-756) PI-specific phospholipase C is 3e-09
d1v0wa2246 d.136.1.2 (A:264-514) Phospholipase D {Streptomyce 3e-09
d2bwqa1125 b.7.1.2 (A:729-853) Regulating synaptic membrane e 3e-09
d2ep6a1126 b.7.1.1 (A:92-217) Multiple C2 and transmembrane d 5e-09
d1rh8a_142 b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [Tax 2e-08
d2nq3a1133 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itc 2e-08
d1w15a_138 b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegi 2e-07
d2cm5a1137 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat ( 5e-07
d1ugka_138 b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens 7e-07
d2cjta1128 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus no 3e-06
d2zkmx2122 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human 1e-05
d1bdya_123 b.7.1.1 (A:) Domain from protein kinase C delta {R 2e-04
d1uowa_157 b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicu 0.001
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 136 Back     information, alignment and structure

class: All beta proteins
fold: C2 domain-like
superfamily: C2 domain (Calcium/lipid-binding domain, CaLB)
family: Synaptotagmin-like (S variant)
domain: C2 domain protein At1g63220
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 72.1 bits (176), Expect = 1e-15
 Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 19/140 (13%)

Query: 37  HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNS 96
           HG L++ + SAK L + D  +                 DPYV +                
Sbjct: 9   HGTLEVVLVSAKGLEDADFLNN---------------MDPYVQLTCRTQDQKSNVAEGMG 53

Query: 97  EDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGS-ELIGTVAIPVEQIYSGGKVEGTYPVLN 155
             P W + F   V+    E+   + D DV    + +G   IP+E ++  G +  T   + 
Sbjct: 54  TTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV 113

Query: 156 GSGKPCKPGATLTLSIQYTP 175
              +       + +++ + P
Sbjct: 114 KDEEYK---GEIWVALSFKP 130
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 258 Back     information, alignment and structure
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 143 Back     information, alignment and structure
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 Back     information, alignment and structure
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 132 Back     information, alignment and structure
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Length = 136 Back     information, alignment and structure
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 131 Back     information, alignment and structure
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Length = 246 Back     information, alignment and structure
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Length = 125 Back     information, alignment and structure
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 126 Back     information, alignment and structure
>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 142 Back     information, alignment and structure
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} Length = 133 Back     information, alignment and structure
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 Back     information, alignment and structure
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 137 Back     information, alignment and structure
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Length = 138 Back     information, alignment and structure
>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 128 Back     information, alignment and structure
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 122 Back     information, alignment and structure
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 123 Back     information, alignment and structure
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 157 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query839
d1v0wa1258 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.89
d2ep6a1126 Multiple C2 and transmembrane domain-containing pr 99.8
d1wfja_136 C2 domain protein At1g63220 {Thale cress (Arabidop 99.79
d1gmia_136 Domain from protein kinase C epsilon {Rat (Rattus 99.78
d1rlwa_126 Domain from cytosolic phospholipase A2 {Human (Hom 99.73
d2cjta1128 Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 99.72
d2nq3a1133 E3 ubiquitin-protein ligase Itchy {Human (Homo sap 99.69
d1a25a_132 C2 domain from protein kinase c (beta) {Rat (Rattu 99.68
d1qasa2131 PI-specific phospholipase C isozyme D1 (PLC-D1), C 99.67
d1rsya_143 Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 99.63
d1rh8a_142 Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} 99.62
d1v0wa2246 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.59
d1dqva1130 Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 99.58
d2cm5a1137 C2b-domain of rabphilin {Rat (Rattus norvegicus) [ 99.53
d1w15a_138 Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 99.52
d2bwqa1125 Regulating synaptic membrane exocytosis protein, r 99.52
d1wfma_138 Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9 99.52
d1bdya_123 Domain from protein kinase C delta {Rat (Rattus no 99.48
d1ugka_138 Synaptotagmin IV {Human (Homo sapiens) [TaxId: 960 99.48
d1uowa_157 Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10 99.46
d2zkmx2122 Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI 99.43
d1byra_152 Nuclease Nuc {Salmonella typhimurium [TaxId: 90371 99.41
d1dqva2145 Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 99.39
d1byra_152 Nuclease Nuc {Salmonella typhimurium [TaxId: 90371 99.37
d1v0wa2246 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.29
d1v0wa1258 Phospholipase D {Streptomyces sp. [TaxId: 1931]} 99.17
d2o8ra3188 Polyphosphate kinase, PPK {Porphyromonas gingivali 95.14
d2o8ra3188 Polyphosphate kinase, PPK {Porphyromonas gingivali 94.3
d1xdpa3187 Polyphosphate kinase, PPK {Escherichia coli [TaxId 94.28
d1xdpa3187 Polyphosphate kinase, PPK {Escherichia coli [TaxId 93.57
d1xdpa4187 Polyphosphate kinase, PPK {Escherichia coli [TaxId 92.82
d1e7ua2174 Phoshoinositide 3-kinase (PI3K) {Pig (Sus scrofa) 92.29
d2o8ra4186 Polyphosphate kinase, PPK {Porphyromonas gingivali 90.39
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Phospholipase D/nuclease
superfamily: Phospholipase D/nuclease
family: Phospholipase D
domain: Phospholipase D
species: Streptomyces sp. [TaxId: 1931]

Probab=99.89  E-value=5.9e-24  Score=220.81  Aligned_cols=157  Identities=16%  Similarity=0.265  Sum_probs=111.2

Q ss_pred             hhHHHHHHHHHhcccccEEEEEecccceeEecCCCCCCcchHHHHHHhhhcCC--CeEEEEEecCCcccccccccccccc
Q 003210          236 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEG--VRVLLLVWDDPTSRSILGYKMDGVM  313 (839)
Q Consensus       236 ~~f~~l~~aI~~A~~~I~I~~w~~~~~~~l~r~~~~~~~~~l~~lL~~kA~~G--V~VriLvwd~~~s~~~~~~~~~~~~  313 (839)
                      ++|++|+++|++||++|+|++|+++|      ++.  .+..|.++|+++|+||  |+||||+ |..++.....     .+
T Consensus        64 ~~~~~~~~~I~~A~~~I~i~~~~~~p------d~~--~~~~i~~aL~~aA~rG~~V~VriL~-d~~gs~~~~~-----~~  129 (258)
T d1v0wa1          64 RLLAKMTENIGNATRTVDISTLAPFP------NGA--FQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMNV-----IP  129 (258)
T ss_dssp             HHHHHHHHHHHTCSSEEEEEEESSCC------CHH--HHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCCC-----HH
T ss_pred             HHHHHHHHHHHHhccEEEEEEEEEcC------Cch--HHHHHHHHHHHHHhCCCCeEEEEEe-CCcccccccc-----ch
Confidence            47999999999999999999997644      222  4578999999999999  9999996 8777643210     00


Q ss_pred             ccCcHHHHhhhcCCCcE--EEeccCccCccccccccccccceecccceEEEEecCCCCCCccEEEEEccccCCCCCCCCC
Q 003210          314 QTHDEETRRVFKHSSVK--VLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNP  391 (839)
Q Consensus       314 ~~~~~~~~~~~~~~~v~--v~~~p~~~~~~~~~~~~~~~~~~~~hHqK~vVVD~~~~~~~~~~vafvGG~dl~~~r~Dt~  391 (839)
                      ........+.+...++.  +.......          ....+.+||+|++|||++        +|||||+||+++||+..
T Consensus       130 ~~~~~~l~~~~~~~~~~~~~~~~~~~~----------~~~~~~rnH~Ki~VVDg~--------~a~vGG~Ni~~~~~~~~  191 (258)
T d1v0wa1         130 SKYRDELTAKLGKAAENITLNVASMTT----------SKTAFSWNHSKILVVDGQ--------SALTGGINSWKDDYLDT  191 (258)
T ss_dssp             HHHHHHHHHHHGGGGGGEEEEEEEECS----------BTTTTBCBCCCEEEETTT--------EEEEESCCCCHHHHTSS
T ss_pred             HHHHHHHHHhccceeeccccccccccc----------cccccccccceEEEEcCC--------EEEECCcccCcccccCC
Confidence            00001111112222222  21111110          012346899999999997        99999999999998642


Q ss_pred             CCCCccccccccCCCCCCCcccCCCCCCCCCCeeeeeeeeeChHHHHHHHHHHHHHhhhcCC
Q 003210          392 HHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKP  453 (839)
Q Consensus       392 ~H~~~~~~~~~~~~d~~n~~~~~~~~~~~~~pWhDv~~~i~Gpaa~dl~~~F~~rW~~~~~~  453 (839)
                                                   ..||||++++|+||+|.++.+.|.++|+.++++
T Consensus       192 -----------------------------~~~w~D~~~~v~Gp~v~~~~~~F~~~W~~~~~e  224 (258)
T d1v0wa1         192 -----------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQN  224 (258)
T ss_dssp             -----------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHT
T ss_pred             -----------------------------CCCeeeeEEEEECHHHHHHHHHHHHHHHHHhCC
Confidence                                         247999999999999999999999999998765
>d2ep6a1 b.7.1.1 (A:92-217) Multiple C2 and transmembrane domain-containing protein 2, MCTP2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat (Rattus rattus) [TaxId: 10117]} Back     information, alignment and structure
>d1rlwa_ b.7.1.1 (A:) Domain from cytosolic phospholipase A2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2cjta1 b.7.1.1 (A:1-128) Unc-13 homolog A {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1rsya_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1rh8a_ b.7.1.2 (A:) Piccolo {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis protein, rim2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1dqva2 b.7.1.2 (A:425-569) Synaptotagmin III {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1byra_ d.136.1.1 (A:) Nuclease Nuc {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1v0wa2 d.136.1.2 (A:264-514) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d1v0wa1 d.136.1.2 (A:6-263) Phospholipase D {Streptomyces sp. [TaxId: 1931]} Back     information, alignment and structure
>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure
>d2o8ra3 d.136.1.4 (A:318-505) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure
>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xdpa3 d.136.1.4 (A:315-501) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1xdpa4 d.136.1.4 (A:502-688) Polyphosphate kinase, PPK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2o8ra4 d.136.1.4 (A:506-691) Polyphosphate kinase, PPK {Porphyromonas gingivalis [TaxId: 837]} Back     information, alignment and structure