Citrus Sinensis ID: 003293
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 833 | 2.2.26 [Sep-21-2011] | |||||||
| O95239 | 1232 | Chromosome-associated kin | yes | no | 0.810 | 0.547 | 0.361 | 1e-101 | |
| P33174 | 1231 | Chromosome-associated kin | yes | no | 0.810 | 0.548 | 0.351 | 1e-101 | |
| Q91784 | 1226 | Chromosome-associated kin | N/A | no | 0.759 | 0.516 | 0.362 | 6e-98 | |
| Q90640 | 1225 | Chromosome-associated kin | yes | no | 0.752 | 0.511 | 0.371 | 1e-97 | |
| Q2VIQ3 | 1234 | Chromosome-associated kin | no | no | 0.800 | 0.540 | 0.364 | 4e-97 | |
| O75037 | 1637 | Kinesin-like protein KIF2 | no | no | 0.226 | 0.115 | 0.63 | 3e-61 | |
| Q9QXL1 | 1668 | Kinesin-like protein KIF2 | no | no | 0.228 | 0.113 | 0.62 | 9e-61 | |
| Q7Z4S6 | 1674 | Kinesin-like protein KIF2 | no | no | 0.231 | 0.115 | 0.613 | 5e-60 | |
| Q9QXL2 | 1672 | Kinesin-like protein KIF2 | no | no | 0.226 | 0.113 | 0.616 | 2e-59 | |
| Q86VH2 | 1401 | Kinesin-like protein KIF2 | no | no | 0.253 | 0.150 | 0.472 | 4e-53 |
| >sp|O95239|KIF4A_HUMAN Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3 | Back alignment and function desciption |
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Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 291/806 (36%), Positives = 428/806 (53%), Gaps = 131/806 (16%)
Query: 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCA 61
+CLEQG+ SR ST MN+QSSRSHAIFTI+LEQ +K S N S +
Sbjct: 188 VSCLEQGNNSRTVASTAMNSQSSRSHAIFTISLEQRKK--------SDKNSSFR-----S 234
Query: 62 KLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDS 121
KLHLVDLAGSER K+T ++G R KEG++INRGLL LGNVISALGDDKK G VPYRDS
Sbjct: 235 KLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKK---GGFVPYRDS 291
Query: 122 KLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTEM 181
KLTRLLQDSLGGNS T+MIAC+SPAD N EETLNTL+YA+RAR I+NKPIVN DP + E+
Sbjct: 292 KLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADRARKIKNKPIVNIDPQTAEL 351
Query: 182 LKMRQQL------------------------EFLQA------------ELCARGGGSSSD 205
++QQ+ E LQ+ E +RG ++
Sbjct: 352 NHLKQQVQQLQVLLLQAHGGTLPGSITVEPSENLQSLMEKNQSLVEENEKLSRGLSEAAG 411
Query: 206 EVQVLKERIAWLEAANEDLCRELHEYR--SRCT--------DVEQRETDAQDGSPCPLK- 254
+ + ERI E ANE + +L E R + C +E +E C L+
Sbjct: 412 QTAQMLERIILTEQANEKMNAKLEELRQHAACKLDLQKLVETLEDQELKENVEIICNLQQ 471
Query: 255 -----SD----GLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLQNSMDKELNE 305
SD + ++++ + + Q+ E SR D A +H L Q M KEL E
Sbjct: 472 LITQLSDETVACMAAAIDTAVEQEAQV-ETSPETSRSSD--AFTTQHALRQAQMSKELVE 528
Query: 306 LNRRLEEKESEMKLVGGSDTA--ALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASN 363
LN+ L KE+ + + +D+ ++ + I ELE E +QKE++ L+ E++ +
Sbjct: 529 LNKALALKEALARKMTQNDSQLQPIQYQYQDNIKELELEVINLQKEKEELVLELQ--TAK 586
Query: 364 SDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQ 423
D KL + +L+ LE QI DLKKK Q +LLK K+ ++ +L EI+ +K Q
Sbjct: 587 KDANQAKLSERRRKRLQELEGQIADLKKKLNEQSKLLKLKESTERTVSKLNQEIRMMKNQ 646
Query: 424 KVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEE 483
+VQL ++K++AE+FRQWK ++KE++QL++ R+ +YE KL+ Q+Q VL+RKTEE
Sbjct: 647 RVQLMRQMKEDAEKFRQWKQKKDKEVIQLKERDRKRQYELLKLERNFQKQSNVLRRKTEE 706
Query: 484 AAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHEVRFD 543
AA A KRLK+ L+ ++ A + + + + K+ WL +E+EVMV+ E +
Sbjct: 707 AAAANKRLKDALQKQREVADKRKETQSRGMEGTAARVKN---WLGNEIEVMVSTEEAKRH 763
Query: 544 YEKQSQVRAALAEELAVLKQVDEFASKGLSPP----RGKNGFARV---SSMSPNARMARI 596
+ R LA+++A LK+ E G +PP R V S S ++ +I
Sbjct: 764 LNDLLEDRKILAQDVAQLKEKKE---SGENPPPKLRRRTFSLTEVRGQVSESEDSITKQI 820
Query: 597 SSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADA 656
SLE + S + + +L +AE DR + RW + ++ +AK L+Y+ L +
Sbjct: 821 ESLETEMEFRSAQIADLQQKLLDAESEDR---PKQRWENIATILEAKCALKYLIGELVSS 877
Query: 657 RCQLWEKDIEIKEMK------------------------------------EQLKELVGL 680
+ Q+ + + +K+ K E++ L+
Sbjct: 878 KIQVSKLESSLKQSKTSCADMQKMLFEERNHFAEIETELQAELVRMEQQHQEKVLYLLSQ 937
Query: 681 LRQSEVRRKEVEEELKLREQAVAITL 706
L+QS++ K++EE + +EQ + TL
Sbjct: 938 LQQSQMAEKQLEESVSEKEQQLLSTL 963
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Motor protein that translocates PRC1 to the plus ends of interdigitating spindle microtubules during the metaphase to anaphase transition, an essential step for the formation of an organized central spindle midzone and midbody and for successful cytokinesis. May play a role in mitotic chromosomal positioning and bipolar spindle stabilization. Homo sapiens (taxid: 9606) |
| >sp|P33174|KIF4_MOUSE Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q91784|KIF4_XENLA Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q90640|KIF4_CHICK Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q2VIQ3|KIF4B_HUMAN Chromosome-associated kinesin KIF4B OS=Homo sapiens GN=KIF4B PE=2 SV=2 | Back alignment and function description |
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| >sp|O75037|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9QXL1|KI21B_MOUSE Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=2 | Back alignment and function description |
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| >sp|Q7Z4S6|KI21A_HUMAN Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9QXL2|KI21A_MOUSE Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2 | Back alignment and function description |
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| >sp|Q86VH2|KIF27_HUMAN Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 833 | ||||||
| 255538224 | 1067 | Kinesin heavy chain, putative [Ricinus c | 0.996 | 0.777 | 0.898 | 0.0 | |
| 224067254 | 1055 | predicted protein [Populus trichocarpa] | 0.992 | 0.783 | 0.872 | 0.0 | |
| 359492582 | 1071 | PREDICTED: chromosome-associated kinesin | 0.995 | 0.774 | 0.860 | 0.0 | |
| 147790676 | 1094 | hypothetical protein VITISV_001140 [Viti | 0.995 | 0.757 | 0.856 | 0.0 | |
| 302142281 | 1077 | unnamed protein product [Vitis vinifera] | 0.995 | 0.769 | 0.856 | 0.0 | |
| 449447023 | 1050 | PREDICTED: chromosome-associated kinesin | 0.993 | 0.788 | 0.832 | 0.0 | |
| 359480793 | 1031 | PREDICTED: chromosome-associated kinesin | 0.992 | 0.802 | 0.815 | 0.0 | |
| 296082375 | 1032 | unnamed protein product [Vitis vinifera] | 0.992 | 0.801 | 0.815 | 0.0 | |
| 356510469 | 1027 | PREDICTED: chromosome-associated kinesin | 0.986 | 0.800 | 0.820 | 0.0 | |
| 356553972 | 1030 | PREDICTED: chromosome-associated kinesin | 0.992 | 0.802 | 0.822 | 0.0 |
| >gi|255538224|ref|XP_002510177.1| Kinesin heavy chain, putative [Ricinus communis] gi|223550878|gb|EEF52364.1| Kinesin heavy chain, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1529 bits (3959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 747/831 (89%), Positives = 785/831 (94%), Gaps = 1/831 (0%)
Query: 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLC 60
MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKL+PV GDSSPNE MNEEYLC
Sbjct: 220 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNPVFPGDSSPNEGMNEEYLC 279
Query: 61 AKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRD 120
AKLHLVDLAGSERAKRTGSDGLRFKEGVHIN+GLLALGNVISALGD+KKRKEGVHVPYRD
Sbjct: 280 AKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRD 339
Query: 121 SKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTE 180
SKLTRLLQDSLGGNS+TVMIACISPADINAEETLNTLKYANRARNIQNKP+VNRDPMS+E
Sbjct: 340 SKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDPMSSE 399
Query: 181 MLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQ 240
ML+MRQQLE+LQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCT VEQ
Sbjct: 400 MLRMRQQLEYLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTAVEQ 459
Query: 241 RETDAQDGSPCPLKSDGLKRSLNSIEQTDYQMGENITGDSREIDE-VAKEWEHTLLQNSM 299
RETDAQDGS C +K+DGLKRSL SIE TDYQMGE ++GDSREIDE VAKEWEHTLLQN+M
Sbjct: 460 RETDAQDGSTCYVKTDGLKRSLQSIESTDYQMGETMSGDSREIDEEVAKEWEHTLLQNTM 519
Query: 300 DKELNELNRRLEEKESEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIEN 359
DKEL+ELNRRLEEKESEMKL GG D AALKQHFGKKI ELEDEKRTVQ+ERD LL EIEN
Sbjct: 520 DKELHELNRRLEEKESEMKLFGGVDPAALKQHFGKKIMELEDEKRTVQQERDRLLAEIEN 579
Query: 360 LASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQF 419
++++SDGQTQK+QD+HA KLK+LEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQ
Sbjct: 580 ISASSDGQTQKMQDIHAQKLKALEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQS 639
Query: 420 IKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQR 479
IKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQK+VLQR
Sbjct: 640 IKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKMVLQR 699
Query: 480 KTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVNVHE 539
KTEEAAMATKRLKELLE+RKSSARENSA+ NGN TNGQSNEKS QRW+DHELEVMVNVHE
Sbjct: 700 KTEEAAMATKRLKELLEARKSSARENSAIANGNGTNGQSNEKSLQRWVDHELEVMVNVHE 759
Query: 540 VRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSL 599
VRF+YEKQSQVRAALAEELAVLKQV EF SKGLSPPRGKNGFAR SSMSPNARMARISSL
Sbjct: 760 VRFEYEKQSQVRAALAEELAVLKQVGEFTSKGLSPPRGKNGFARASSMSPNARMARISSL 819
Query: 600 ENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQ 659
ENMLSI+SNSLVAMASQLSEAEER+R FTNRGRWNQLRSM DAKNLLQYMFNSL DARCQ
Sbjct: 820 ENMLSITSNSLVAMASQLSEAEERERGFTNRGRWNQLRSMGDAKNLLQYMFNSLGDARCQ 879
Query: 660 LWEKDIEIKEMKEQLKELVGLLRQSEVRRKEVEEELKLREQAVAITLARSASGNLHNSLE 719
+WEK++EIKEMKEQ KELV LLRQSE RRKEVE+ELKLREQAVAI LA SASGN SL+
Sbjct: 880 IWEKEMEIKEMKEQFKELVSLLRQSEARRKEVEKELKLREQAVAIALATSASGNSPISLK 939
Query: 720 HFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLAALG 779
HFADD SGP SPMSVPAQKQLKYTPGIANGS+RESAAFI+Q RK VPLG LSM+KL G
Sbjct: 940 HFADDMSGPLSPMSVPAQKQLKYTPGIANGSVRESAAFIDQTRKMVPLGHLSMRKLVVAG 999
Query: 780 QGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPRPRALP 830
QGGKLWRWKRSHHQWLLQFKWKWQKPWRLSE IRHSDETI+RAK RP ALP
Sbjct: 1000 QGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEMIRHSDETIMRAKHRPHALP 1050
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224067254|ref|XP_002302432.1| predicted protein [Populus trichocarpa] gi|222844158|gb|EEE81705.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359492582|ref|XP_002282968.2| PREDICTED: chromosome-associated kinesin KIF4A-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147790676|emb|CAN61020.1| hypothetical protein VITISV_001140 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|302142281|emb|CBI19484.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449447023|ref|XP_004141269.1| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus] gi|449523834|ref|XP_004168928.1| PREDICTED: chromosome-associated kinesin KIF4A-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|359480793|ref|XP_002278379.2| PREDICTED: chromosome-associated kinesin KIF4-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296082375|emb|CBI21380.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356510469|ref|XP_003523960.1| PREDICTED: chromosome-associated kinesin KIF4-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356553972|ref|XP_003545324.1| PREDICTED: chromosome-associated kinesin KIF4A-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 833 | ||||||
| TAIR|locus:2160912 | 1035 | FRA1 "FRAGILE FIBER 1" [Arabid | 0.987 | 0.795 | 0.763 | 0.0 | |
| TAIR|locus:2074855 | 1051 | KICP-02 [Arabidopsis thaliana | 0.961 | 0.762 | 0.615 | 3e-258 | |
| TAIR|locus:2173537 | 1294 | AT5G60930 [Arabidopsis thalian | 0.548 | 0.353 | 0.427 | 7.4e-92 | |
| MGI|MGI:108389 | 1231 | Kif4 "kinesin family member 4" | 0.534 | 0.361 | 0.378 | 8.2e-68 | |
| UNIPROTKB|O95239 | 1232 | KIF4A "Chromosome-associated k | 0.783 | 0.530 | 0.330 | 8.8e-68 | |
| UNIPROTKB|Q2VIQ3 | 1234 | KIF4B "Chromosome-associated k | 0.519 | 0.350 | 0.382 | 4.4e-67 | |
| UNIPROTKB|F1PDX5 | 1234 | KIF4A "Uncharacterized protein | 0.534 | 0.360 | 0.380 | 1e-66 | |
| UNIPROTKB|E9PSJ3 | 1231 | Kif4 "Protein Kif4" [Rattus no | 0.584 | 0.395 | 0.354 | 1e-66 | |
| FB|FBgn0032243 | 1048 | Klp31E "Kinesin-like protein a | 0.220 | 0.175 | 0.596 | 1.6e-66 | |
| UNIPROTKB|K7GQ60 | 1210 | KIF4A "Uncharacterized protein | 0.534 | 0.367 | 0.376 | 4.1e-66 |
| TAIR|locus:2160912 FRA1 "FRAGILE FIBER 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3196 (1130.1 bits), Expect = 0., P = 0.
Identities = 638/836 (76%), Positives = 712/836 (85%)
Query: 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLC 60
MAACL+QGS+SRATGSTNMNNQSSRSHAIFTIT+EQMRK++ S + + N S+ EEYLC
Sbjct: 205 MAACLDQGSVSRATGSTNMNNQSSRSHAIFTITVEQMRKINTDSPENGAYNGSLKEEYLC 264
Query: 61 AKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRD 120
AKLHLVDLAGSERAKRTGSDGLRFKEGVHIN+GLLALGNVISALGD+KKRK+G HVPYRD
Sbjct: 265 AKLHLVDLAGSERAKRTGSDGLRFKEGVHINKGLLALGNVISALGDEKKRKDGAHVPYRD 324
Query: 121 SKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTE 180
SKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNI+NKP+VNRDP+S+E
Sbjct: 325 SKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIRNKPVVNRDPVSSE 384
Query: 181 MLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQ 240
MLKMRQQ+E+LQAEL R GGSS EVQ LKERI WLE ANE+LCRELHEYRSRC VE
Sbjct: 385 MLKMRQQVEYLQAELSLRTGGSSCAEVQALKERIVWLETANEELCRELHEYRSRCPGVEH 444
Query: 241 RETDAQDGSPCPL----KSDGLKRSLNSIEQTDYQMGENITGDSREIDEVAKEWEHTLLQ 296
E D +D + + DGLKRSL+SIE ++Y M E TGDSREIDE AKEWEH LLQ
Sbjct: 445 SEKDFKDIRADDIVGSVRPDGLKRSLHSIESSNYPMVEATTGDSREIDEEAKEWEHKLLQ 504
Query: 297 NSMDXXXXXXXXXXXXXXSEMKLVGGSDTAALKQHFGKKIAELEDEKRTVQKERDHLLTE 356
NSMD SEMKL G D AALKQHFGKKIAE+EDEKR+VQ+ER+ LL E
Sbjct: 505 NSMDKELYELNRRLEEKESEMKLFDGYDPAALKQHFGKKIAEVEDEKRSVQEERNRLLAE 564
Query: 357 IENLASNSDGQTQKLQDVHAHKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDE 416
IENLAS DGQ QKLQDVHA LK+LEAQILDLKKKQE+QVQLLKQKQKSD+AA+RLQDE
Sbjct: 565 IENLAS--DGQAQKLQDVHAQNLKALEAQILDLKKKQESQVQLLKQKQKSDDAARRLQDE 622
Query: 417 IQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEGRRNEYERHKLQALNQRQKLV 476
IQ IKAQKVQLQHR+KQEAEQFRQWKASREKELLQLRKEGR++EYERHKLQALNQRQK+V
Sbjct: 623 IQSIKAQKVQLQHRMKQEAEQFRQWKASREKELLQLRKEGRKSEYERHKLQALNQRQKMV 682
Query: 477 LQRKTEEAAMATKRLKELLESRKSSARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMVN 536
LQRKTEEAAMATKRLKELLE+RKSS RE+SA TNG TNGQ+NEKS QRWLDHELEVMVN
Sbjct: 683 LQRKTEEAAMATKRLKELLEARKSSPREHSAGTNGFGTNGQTNEKSLQRWLDHELEVMVN 742
Query: 537 VHEVRFDYEKQSQVRXXXXXXXXVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARI 596
VHEVR +YEKQS VR VL+QVDEFA KGLSPPRGKNGFAR SS+SPNARMARI
Sbjct: 743 VHEVRHEYEKQSHVRAALAEELAVLRQVDEFAVKGLSPPRGKNGFARASSLSPNARMARI 802
Query: 597 SSLENMLSISSNSLVAMASQLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADA 656
SSLENML ISSNSLVAMASQLSEAEER+R FTNRGRWNQLRSM +AKNLLQYMFNSLA+
Sbjct: 803 SSLENMLVISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSLAET 862
Query: 657 RCQLWEKDIEIKEMKEQLKELVGLLRQSXXXXXXXXXXXXXXXQAVAITLARSASGNLHN 716
RCQLWEKD+EIKEMK+Q KE+VGLLRQS QA+A +L G +
Sbjct: 863 RCQLWEKDVEIKEMKDQFKEIVGLLRQSELRRKEAEKELKLREQAIATSL-----GTPPS 917
Query: 717 SLEHFADDTSGPPSPMSVPAQKQLKYTPGIANGSIRESAAFINQNRKRVPLGQLSMKKLA 776
S++H A+D S PSPM+VPAQKQLK+TPGIANG +R AAF++ N+K VP+GQ+SM+KL+
Sbjct: 918 SVKHVAEDLS-TPSPMTVPAQKQLKFTPGIANGKVRGPAAFLDTNKKMVPMGQVSMRKLS 976
Query: 777 ALG-QGGKLWRWKRSHHQWLLQFKWKWQKPWRLSEWIRHSDETIVRAKPRPRALPH 831
A+G QGG+LWRWKRSHHQW++QFKWKWQKPWRLSEWIR SDET++++KPR +ALP+
Sbjct: 977 AVGKQGGRLWRWKRSHHQWIVQFKWKWQKPWRLSEWIRTSDETLLKSKPRLKALPN 1032
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| TAIR|locus:2074855 KICP-02 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2173537 AT5G60930 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| MGI|MGI:108389 Kif4 "kinesin family member 4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O95239 KIF4A "Chromosome-associated kinesin KIF4A" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2VIQ3 KIF4B "Chromosome-associated kinesin KIF4B" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1PDX5 KIF4A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E9PSJ3 Kif4 "Protein Kif4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| FB|FBgn0032243 Klp31E "Kinesin-like protein at 31E" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|K7GQ60 KIF4A "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | fgenesh4_pg.C_LG_II001130 | hypothetical protein (1055 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 833 | |||
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 1e-102 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 8e-77 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 2e-74 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 2e-69 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 2e-66 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 1e-64 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 6e-61 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 5e-60 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 2e-59 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 9e-56 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 7e-54 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 1e-48 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 1e-46 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 3e-43 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 2e-41 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 5e-38 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 8e-37 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 7e-35 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 2e-33 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 3e-07 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 3e-06 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 6e-06 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 6e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 7e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-05 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 1e-05 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 1e-05 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 2e-05 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 1e-04 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 2e-04 | |
| COG0419 | 908 | COG0419, SbcC, ATPase involved in DNA repair [DNA | 2e-04 | |
| pfam05557 | 722 | pfam05557, MAD, Mitotic checkpoint protein | 4e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 8e-04 | |
| TIGR02168 | 1179 | TIGR02168, SMC_prok_B, chromosome segregation prot | 0.001 | |
| PRK00286 | 438 | PRK00286, xseA, exodeoxyribonuclease VII large sub | 0.001 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.002 | |
| TIGR02169 | 1164 | TIGR02169, SMC_prok_A, chromosome segregation prot | 0.003 | |
| PRK11448 | 1123 | PRK11448, hsdR, type I restriction enzyme EcoKI su | 0.004 | |
| PRK03918 | 880 | PRK03918, PRK03918, chromosome segregation protein | 0.004 |
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
Score = 318 bits (818), Expect = e-102
Identities = 116/167 (69%), Positives = 130/167 (77%), Gaps = 6/167 (3%)
Query: 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLC 60
+ +CLEQGSLSR T ST MN+QSSRSHAIFTITLEQ RK P + + L
Sbjct: 181 VMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTRKNGP----IAPMSGDDKNSTLT 236
Query: 61 AKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRD 120
+K H VDLAGSER K+TG+ G R KEG+ IN GLLALGNVISALGD+ K+ G HVPYRD
Sbjct: 237 SKFHFVDLAGSERLKKTGATGDRLKEGISINSGLLALGNVISALGDESKK--GSHVPYRD 294
Query: 121 SKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQ 167
SKLTRLLQDSLGGNS T+MIAC+SPAD N EETLNTLKYANRARNI+
Sbjct: 295 SKLTRLLQDSLGGNSHTLMIACVSPADSNFEETLNTLKYANRARNIK 341
|
Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 341 |
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|223496 COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >gnl|CDD|218636 pfam05557, MAD, Mitotic checkpoint protein | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|233757 TIGR02168, SMC_prok_B, chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >gnl|CDD|234714 PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|233758 TIGR02169, SMC_prok_A, chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >gnl|CDD|236912 PRK11448, hsdR, type I restriction enzyme EcoKI subunit R; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235175 PRK03918, PRK03918, chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 833 | |||
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 99.97 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 99.97 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 98.57 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 98.16 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 98.16 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 97.96 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 97.88 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 97.71 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 97.71 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 97.47 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 97.47 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 97.39 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 97.39 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.35 | |
| PF08826 | 61 | DMPK_coil: DMPK coiled coil domain like; InterPro: | 97.34 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 97.29 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 97.25 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 97.24 | |
| PRK11637 | 428 | AmiB activator; Provisional | 97.07 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.98 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 96.96 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 96.77 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 96.72 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 96.68 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 96.65 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 96.61 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 96.57 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 96.37 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 96.28 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 96.27 | |
| PF00038 | 312 | Filament: Intermediate filament protein; InterPro: | 96.17 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.12 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 96.11 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 96.06 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 95.79 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 95.44 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 95.43 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 95.16 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 95.16 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 95.15 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 94.98 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 94.91 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 94.66 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 94.49 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 94.37 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 94.33 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 94.29 | |
| KOG4674 | 1822 | consensus Uncharacterized conserved coiled-coil pr | 94.21 | |
| PF00261 | 237 | Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop | 94.14 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 94.1 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 93.95 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 93.71 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 93.71 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 93.42 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 93.33 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 93.28 | |
| PF05701 | 522 | WEMBL: Weak chloroplast movement under blue light; | 93.0 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 92.82 | |
| PRK09039 | 343 | hypothetical protein; Validated | 92.7 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 92.65 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 92.26 | |
| COG5185 | 622 | HEC1 Protein involved in chromosome segregation, i | 92.14 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 92.01 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 91.88 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 91.8 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 91.75 | |
| PF09787 | 511 | Golgin_A5: Golgin subfamily A member 5; InterPro: | 91.34 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 90.58 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 90.45 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 90.12 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 90.05 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 89.59 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 89.55 | |
| PF01576 | 859 | Myosin_tail_1: Myosin tail; InterPro: IPR002928 Mu | 89.54 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 88.33 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 88.32 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 88.18 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 88.13 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 88.05 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 87.73 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 87.59 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 87.27 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 86.95 | |
| PF10481 | 307 | CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 | 86.85 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 86.61 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 86.35 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 85.13 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 84.6 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 84.28 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 83.91 | |
| KOG0804 | 493 | consensus Cytoplasmic Zn-finger protein BRAP2 (BRC | 83.88 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 82.84 | |
| PF08232 | 134 | Striatin: Striatin family; InterPro: IPR013258 Thi | 82.75 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 82.33 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 82.07 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 80.13 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 80.07 | |
| PF05557 | 722 | MAD: Mitotic checkpoint protein; InterPro: IPR0086 | 80.05 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 80.02 |
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-92 Score=816.75 Aligned_cols=655 Identities=41% Similarity=0.553 Sum_probs=571.2
Q ss_pred CHHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCc
Q 003293 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSD 80 (833)
Q Consensus 1 ~~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~ 80 (833)
+.++|..|...|++++|+||..|||||+||||++++..+... ..+.+|||||||||||||.++|+++
T Consensus 168 ~~~~L~~g~~~RtvasTnMN~qssRshAifti~lkq~kk~~~-------------~s~~~sKlhlVDLAGSER~kkT~a~ 234 (913)
T KOG0244|consen 168 LLSRLEKGSLERTVASTNMNAQSSRSHAIFTITLKQRKKLSK-------------RSSFCSKLHLVDLAGSERVKKTKAE 234 (913)
T ss_pred HHHHHHhchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHhhc-------------cchhhhhhheeeccccccccccccc
Confidence 467899999999999999999999999999999998765422 2267899999999999999999999
Q ss_pred ccccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHH
Q 003293 81 GLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYA 160 (833)
Q Consensus 81 g~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA 160 (833)
|+|++||++||.+|++|||||+||++.++ ++|||||||+|||||||+||||+.|+||+||||++.|+.||++||+||
T Consensus 235 gdrlKEgInIN~gLL~LgnVIsaLg~~kk---~~~vpyRdSkltrlLQdslgGns~tlmiaCiSpadsn~~EtlnTl~ya 311 (913)
T KOG0244|consen 235 GDRLKEGININGGLLALGNVISALGEAKK---GGEVPYRDSKLTRLLQDSLGGNSDTLMIACISPADSNAQETLNTLRYA 311 (913)
T ss_pred hhhhhhccCcchHHHHHHHHHHHHHhhhc---CCcccchHHHHHHHHHHHhcCCcceeeeeecChhhhhhhhHHHHHHHh
Confidence 99999999999999999999999999875 689999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccccccCCcchHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 003293 161 NRARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELCARGGGSSSDEVQVLKERIAWLEAANEDLCRELHEYRSRCTDVEQ 240 (833)
Q Consensus 161 ~rar~I~n~p~vn~d~~~~~i~~l~~~i~~L~~el~~~~~g~~s~~~~~Lkeki~~Le~ene~L~~EL~e~r~rl~~leq 240 (833)
.||+.|+|+|+||.||...++..++.+|+.|+.++....|.....++..+..++..++..++.+..++++.+..|.....
T Consensus 312 ~Rak~iknk~vvN~d~~~~~~~~lK~ql~~l~~ell~~~~~~~~~ei~sl~~e~~~l~~~~d~~~~e~~e~~s~~s~~~~ 391 (913)
T KOG0244|consen 312 DRAKQIKNKPVVNQDPKSFEMLKLKAQLEPLQVELLSKAGDELDAEINSLPFENVTLEETLDALLQEKGEERSTLSSKSL 391 (913)
T ss_pred hHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHhhccccchhHHhhhhhhhhhhhhhHHHHhcchhhhhhhhhHHHH
Confidence 99999999999999999999999999999999999888766667899999999999999999999999999887755443
Q ss_pred HHHHhhcCC------------------CC--CCcchhhhhhhhhhccccccccccCC--CCchhHHHHHHHHHHHHHHhH
Q 003293 241 RETDAQDGS------------------PC--PLKSDGLKRSLNSIEQTDYQMGENIT--GDSREIDEVAKEWEHTLLQNS 298 (833)
Q Consensus 241 ~~~d~q~~~------------------~~--~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ake~E~~~~Q~~ 298 (833)
+...+.... .. .-+...|.+.++.+.+...++..... ++...-....+.++|+..|..
T Consensus 392 ~~~~~~~~k~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~v~~~~~e~~~~~~~~~~e~~~~~~~~~~~~~~~q~~ 471 (913)
T KOG0244|consen 392 KLTGAEKEKDKLRRRTDSCMNLLSEDSNEDASDKSASLPKPLEPVDSGTEEIGMNTDTSGDEAAEKELSETIGHPQKQGS 471 (913)
T ss_pred hcchhhhhHHHHHHHHHHHHHHHHHhHhHHhhhccccCCccccccccccccccccccCCCchhhhcccccCccchHHHhh
Confidence 322221100 00 00001122222222211111111111 111111122456889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhhhhHHHHHHH
Q 003293 299 MDKELNELNRRLEEKESEMKLVGG--SDTAALKQHFGKKIAELEDEKRTVQKERDHLLTEIENLASNSDGQTQKLQDVHA 376 (833)
Q Consensus 299 l~~EL~eLnkqLe~KE~e~k~~~~--~~~~~lkq~yekKi~eLE~ei~~LqkErdeLl~eL~~~~~~~~~~~~KL~e~~e 376 (833)
|..++.+++++|++|+.+++.+.. .....++++|+.++..|+.++..++.|+++|..+|..... ...++.++|.
T Consensus 472 ls~el~el~k~l~~Ke~l~rr~~~~~~~~~~~~~~~e~~~~~le~e~~~le~E~~~l~~el~~~~~----~~~kl~eer~ 547 (913)
T KOG0244|consen 472 LSGELSELEKRLAEKEPLTRRKAYEKAEKSKAKEQYESDSGTLEAEKSPLESERSRLRNELNVFNR----LAAKLGEERV 547 (913)
T ss_pred hhHHHHHHHhhhccccHHHHHHHHhhhhhhHHHHHHhhhhhhHHHHhcccccccHHHHHHHHhhhH----HHHHhhhHHH
Confidence 999999999999999999998875 4567899999999999999999999999999999987732 7899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 003293 377 HKLKSLEAQILDLKKKQENQVQLLKQKQKSDEAAKRLQDEIQFIKAQKVQLQHRIKQEAEQFRQWKASREKELLQLRKEG 456 (833)
Q Consensus 377 kkLqeLE~ei~~LkkK~~~q~~llk~K~k~E~~ik~L~~EIq~mK~qKv~L~kkmkeE~ek~r~~k~~~eKEi~qLKke~ 456 (833)
++|+.||.++..|++++.+|..+++.+.+.+....+|..||..||.++|+|+++|++++++|+.||+..+||++|+++++
T Consensus 548 qklk~le~q~s~lkk~l~~~~~l~~~~~~~~~~~~kl~~ei~~~k~~kv~l~~~~~~d~ekfr~~K~~~~Ke~~qlk~~~ 627 (913)
T KOG0244|consen 548 QKLKSLETQISLLKKKLSSQRKLIKPKPKSEGIRAKLLQEIHIAKGQKVQLLRVMKEDAEKFRQWKDRTEKEWNQLKGQE 627 (913)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhHhhhhhHHHHHHHHHHHHHHHhhhhh-ccccccccCCCCCCCCcchHHHHHHHHHHHHHHH
Q 003293 457 RRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLESRKSS-ARENSAVTNGNLTNGQSNEKSFQRWLDHELEVMV 535 (833)
Q Consensus 457 rK~~~e~~kLe~~~~kQ~~VLkRKtEEa~aa~kRLK~~le~rK~~-~r~~~~~~~~~~~~~~~~~~~~~~Wle~e~ev~~ 535 (833)
|++++++.+++..+.+|..||+|+|+|++++++||++++.+|+.+ +.......+| ....+...|+++++++++
T Consensus 628 rk~~~~~~~~~~l~~~q~~vl~~kt~eas~~~krlk~a~~~r~~~~s~~~~~~~~~------~~~~~~~~~~~~e~ei~~ 701 (913)
T KOG0244|consen 628 RKSEGEHPKLEVLVKKQNYVLQRKTEEASAANKRLKEALCIRALTSSGQVTLGDNG------ASTSRTVAWPSNEIEINQ 701 (913)
T ss_pred hhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhcC------chhHHHHHHhccchHHHH
Confidence 999999999999999999999999999999999999999999977 3343333443 234567999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhcCCCCCCCCCcccccccCChhhHHHHHHHHHHHHhhchHHHHHHHH
Q 003293 536 NVHEVRFDYEKQSQVRAALAEELAVLKQVDEFASKGLSPPRGKNGFARVSSMSPNARMARISSLENMLSISSNSLVAMAS 615 (833)
Q Consensus 536 ~~~e~~~~le~l~~~R~~L~~el~~Lk~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~aqI~~Le~~~~~~~~~l~~l~~ 615 (833)
.+.+++.+|+.++++|+.+..++..++... ..+|.+|+.+++..+.+|.+|++
T Consensus 702 ~~~~~~~~l~~~~~~ra~~~~d~~~~r~~~---------------------------~k~l~~L~~~~~~~~~~i~s~~~ 754 (913)
T KOG0244|consen 702 IALNPRGTLLYAAEERAVRMWDLKRLRSEG---------------------------KKLLGSLEPVMELTSDQISSMQD 754 (913)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------HHHHhhhHHHHHHHHHHHHhHHh
Confidence 999999999999999999999999998742 45799999999999999999999
Q ss_pred HhHHHhhhhhccccccccccccCHHHHHHHHHHHHHHHHHHHHHHh-------HHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 003293 616 QLSEAEERDRLFTNRGRWNQLRSMADAKNLLQYMFNSLADARCQLW-------EKDIEIKEMKEQLKELVGLLRQSEVRR 688 (833)
Q Consensus 616 kl~e~ee~~r~~~~~~rw~~irs~~eAk~~l~~L~~~~~~~r~~~~-------~~~~el~e~k~~~~~l~~~l~~~e~q~ 688 (833)
++.+++.+.+... +|+++.|+.+||+.+.|+|+.++..|+..+ ++...+.++.+++...+..|+..+.+.
T Consensus 755 ~i~~a~~d~~~~~---~w~~v~t~~~ak~~~~~~~~~~~~~r~~~~~~~~~~re~~~~~~~l~~kl~~~q~~~rk~e~~~ 831 (913)
T KOG0244|consen 755 LIITASKDERIKM---RWEAVGTLSEAKNFEPYLYDGIVALRIQGDNLFSGSREKGIKKWDLTQKLLDEQVNLRKDEVQA 831 (913)
T ss_pred hhcccccchhHHH---HHhcccccccchhhhHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988877433 999999999999999999999999999888 566778889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhc
Q 003293 689 KEVEEELKLREQAVAITLARSAS 711 (833)
Q Consensus 689 ~~l~~~~~~~~~~~~~~l~~~~~ 711 (833)
++++++...+.+.+.+++++...
T Consensus 832 ~~~v~e~~~~~~~~~~~~~~~~~ 854 (913)
T KOG0244|consen 832 LGVVPEHPVLLSGCKGGILKVWQ 854 (913)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHH
Confidence 99999999999999999998754
|
|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF08826 DMPK_coil: DMPK coiled coil domain like; InterPro: IPR014930 This domain is found in the myotonic dystrophy protein kinase (DMPK) and adopts a coiled coil structure | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF01576 Myosin_tail_1: Myosin tail; InterPro: IPR002928 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PF08232 Striatin: Striatin family; InterPro: IPR013258 This domain is associated with the N terminus of striatin | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >PF05557 MAD: Mitotic checkpoint protein; InterPro: IPR008672 This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 833 | ||||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 7e-46 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 8e-46 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 6e-43 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 2e-41 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 2e-37 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 2e-36 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-36 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 6e-36 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 6e-36 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 7e-36 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 1e-35 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 1e-35 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 2e-35 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 2e-35 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 2e-35 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 2e-35 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 2e-35 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 2e-35 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 3e-35 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 3e-35 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 3e-35 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 2e-34 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 2e-34 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 3e-34 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 3e-34 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 1e-33 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 1e-32 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 6e-32 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-31 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 2e-31 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 1e-29 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-28 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 3e-26 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 1e-25 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 2e-24 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 5e-24 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 9e-24 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 1e-23 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 1e-23 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 2e-23 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 9e-23 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 2e-22 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 2e-22 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 7e-22 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 8e-22 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-21 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-21 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 1e-21 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 2e-20 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 2e-19 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 2e-17 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-17 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 1e-16 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 1e-16 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 1e-16 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 1e-16 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 7e-16 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 2e-05 |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
|
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
Score = 316 bits (811), Expect = e-101
Identities = 81/198 (40%), Positives = 116/198 (58%), Gaps = 18/198 (9%)
Query: 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLC 60
+ +E+G +R TNMN SSRSH++F I ++Q N++ L
Sbjct: 186 VFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENL--------------ENQKKLS 231
Query: 61 AKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRD 120
KL+LVDLAGSE+ +TG++G E +IN+ L ALGNVISAL D K H+PYRD
Sbjct: 232 GKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKT----HIPYRD 287
Query: 121 SKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRDPMSTE 180
SKLTR+LQ+SLGGN+RT ++ C SPA N ET +TL + RA+ ++N VN + + E
Sbjct: 288 SKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEE 347
Query: 181 MLKMRQQLEFLQAELCAR 198
+ ++ + A L +
Sbjct: 348 WKRRYEKEKEKNARLKGK 365
|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 | Back alignment and structure |
|---|
| >1f5n_A Interferon-induced guanylate-binding protein 1; GBP, GTP hydrolysis, GDP, GMP, dynamin related, large GTPase family. GMPPNP, GPPNHP.; HET: GNP; 1.70A {Homo sapiens} SCOP: a.114.1.1 c.37.1.8 PDB: 1dg3_A* 2b8w_A* 2b92_A* 2bc9_A* 2d4h_A* Length = 592 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 833 | |||
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 100.0 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 100.0 | |
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 100.0 | |
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 100.0 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 100.0 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 100.0 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 100.0 | |
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 100.0 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 100.0 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 100.0 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 100.0 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 100.0 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 100.0 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 100.0 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 100.0 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 100.0 | |
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 100.0 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 100.0 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 100.0 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 100.0 | |
| 3nwn_A | 359 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 100.0 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 100.0 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 100.0 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 100.0 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 100.0 | |
| 4h1g_A | 715 | Maltose binding protein-cakar3 motor domain fusio; | 100.0 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 99.96 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 99.95 | |
| 1wt6_A | 81 | Myotonin-protein kinase; coiled-coil, kinase activ | 97.48 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 97.15 | |
| 1i84_S | 1184 | Smooth muscle myosin heavy chain; muscle protein, | 97.12 | |
| 3ol1_A | 119 | Vimentin; structural genomics, PSI-2, protein stru | 94.85 | |
| 2v71_A | 189 | Nuclear distribution protein NUDE-like 1; developm | 94.54 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 94.23 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 93.72 | |
| 3na7_A | 256 | HP0958; flagellar biogenesis, flagellum export, C4 | 93.53 | |
| 2dfs_A | 1080 | Myosin-5A; myosin-V, inhibited state, cryoelectron | 93.09 | |
| 2v71_A | 189 | Nuclear distribution protein NUDE-like 1; developm | 92.69 | |
| 3o0z_A | 168 | RHO-associated protein kinase 1; coiled-coil, tran | 91.73 | |
| 1c1g_A | 284 | Tropomyosin; contractIle protein; 7.00A {Sus scrof | 90.08 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 86.7 | |
| 3oja_B | 597 | Anopheles plasmodium-responsive leucine-rich REPE | 85.0 | |
| 3o0z_A | 168 | RHO-associated protein kinase 1; coiled-coil, tran | 82.56 | |
| 3vkg_A | 3245 | Dynein heavy chain, cytoplasmic; AAA+ protein, mol | 81.78 | |
| 3s4r_A | 93 | Vimentin; alpha-helix, cytoskeleton, intermediate | 81.21 | |
| 3swk_A | 86 | Vimentin; cytoskeleton, intermediate filament, alp | 80.63 |
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-46 Score=413.41 Aligned_cols=173 Identities=44% Similarity=0.664 Sum_probs=156.4
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|++.... ......|+|+|||||||||..++++.|
T Consensus 182 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~--------------~~~~~~skL~lVDLAGSEr~~~t~~~g 247 (369)
T 3cob_A 182 KTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ--------------TQAIARGKLSFVDLAGSERVKKSGSAG 247 (369)
T ss_dssp HHHHHHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETT--------------TCCEEEEEEEEEECCCSSCCCCCSSCS
T ss_pred HHHHHHHhhcceeecccCCCCCCcceEEEEEEEEEecCC--------------CCcEEEEEEEEEeCCCCCcccccCccc
Confidence 578999999999999999999999999999999986431 123467999999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++. .||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 248 ~rl~E~~~INkSL~aLg~vI~aL~~~~-----~hvPyRdSkLT~lLqdsLgGnskt~mIa~isP~~~~~~ETl~TLrfA~ 322 (369)
T 3cob_A 248 NQLKEAQSINKSLSALGDVISALSSGN-----QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYAS 322 (369)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTC-----SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCC-----CcCCCcCCHHHHHHHHhcCCCccEEEEEEeCCccccHHHHHHHHHHHH
Confidence 999999999999999999999999864 499999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccCCcchHHHHHHHHHHHHHHHHH
Q 003293 162 RARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAEL 195 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~~i~~l~~~i~~L~~el 195 (833)
||+.|+|.|++|.++ .++.+|+.++..++.+.
T Consensus 323 rak~i~~~~~~n~~~--~ei~~L~~~l~~~~~~~ 354 (369)
T 3cob_A 323 RVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQA 354 (369)
T ss_dssp HHHTCBCCCCCCEEC--HHHHHHHHHTTCC----
T ss_pred HHhhcccCCcccCCH--HHHHHHHHHHHHHHHhc
Confidence 999999999999988 67778887777766654
|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* | Back alignment and structure |
|---|
| >4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori} | Back alignment and structure |
|---|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} | Back alignment and structure |
|---|
| >2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} | Back alignment and structure |
|---|
| >1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A | Back alignment and structure |
|---|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens} | Back alignment and structure |
|---|
| >3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A* | Back alignment and structure |
|---|
| >3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A | Back alignment and structure |
|---|
| >3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 833 | ||||
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 3e-50 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 3e-49 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 3e-47 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 8e-47 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 1e-46 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 2e-45 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 2e-44 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 1e-43 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 2e-37 |
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Mouse (Mus musculus), kif1a [TaxId: 10090]
Score = 178 bits (452), Expect = 3e-50
Identities = 81/171 (47%), Positives = 108/171 (63%), Gaps = 17/171 (9%)
Query: 1 MAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLC 60
+ ++ G+ R +TNMN SSRSHA+F I Q R E+
Sbjct: 189 IQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRH----------DAETNITTEKV 238
Query: 61 AKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLALGNVISALGD-------DKKRKEG 113
+K+ LVDLAGSERA TG+ G R KEG +IN+ L LG VISAL + +KK+K+
Sbjct: 239 SKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKT 298
Query: 114 VHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRAR 164
+PYRDS LT LL+++LGGNSRT M+A +SPADIN +ETL+TL+YA+RA+
Sbjct: 299 DFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADRAK 349
|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
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| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
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| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
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| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
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| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
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| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
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| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
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| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
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Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 833 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=3.1e-41 Score=372.75 Aligned_cols=174 Identities=44% Similarity=0.663 Sum_probs=145.6
Q ss_pred HHHHHHHhhcCccccCCCCcccCcceeeeEEEEEeeeccCCCCCCCCCCCCCccchhhhceeeeeecCCCccccccCCcc
Q 003293 2 AACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLSPVSLGDSSPNESMNEEYLCAKLHLVDLAGSERAKRTGSDG 81 (833)
Q Consensus 2 ~~~l~~G~~~R~~~~T~~N~~SSRSHaIfti~i~q~~~~~~~~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~kt~~~g 81 (833)
..+|..|..+|++++|.||..|||||+||+|+|.+.... +.....|+|+|||||||||..++++.|
T Consensus 177 ~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~--------------~~~~~~~kl~~vDLAGsEr~~~~~~~g 242 (364)
T d1sdma_ 177 KTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ--------------TQAIARGKLSFVDLAGSERVKKSGSAG 242 (364)
T ss_dssp HHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETT--------------TCCEEEEEEEEEECCCCSCCCC-----
T ss_pred HHHhhccceeeccccccccccccccceEEEEEEEEeccC--------------cceeeeEEEEeechhhccccccccccC
Confidence 578999999999999999999999999999999986532 123467899999999999999999999
Q ss_pred cccchhhhhhhhhhHHHHHHHHhccccCCCCCccccCCCcchhhhhcccCCCCcceeEEeecCCCCCCHHHHHHHHHHHH
Q 003293 82 LRFKEGVHINRGLLALGNVISALGDDKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYAN 161 (833)
Q Consensus 82 ~r~kE~~~IN~SL~aLg~vI~aL~~~~~~~~~~~iPyRdSkLTrLLqdsLgGns~t~mI~~VSP~~~~~~ETlsTL~fA~ 161 (833)
.+++|+.+||+||++||+||.+|+++.+ ||||||||||+||+|+|||||+|+|||||||+..+++||++||+||+
T Consensus 243 ~~~~E~~~iN~SL~~L~~vi~aL~~~~~-----~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~ 317 (364)
T d1sdma_ 243 NQLKEAQSINKSLSALGDVISALSSGNQ-----HIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYAS 317 (364)
T ss_dssp ----CCCTTCHHHHHHHHHHHHHHHTCS-----CCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHH
T ss_pred ceeeeccccccchhhHHHHHHHHHcCCC-----cCCchhhhhhHHHHhhcCCCceEEEEEEeCCCcchHHHHHHHHHHHH
Confidence 9999999999999999999999998654 99999999999999999999999999999999999999999999999
Q ss_pred HhhcccccccccCCcchHHHHHHHHHHHHHHHHHh
Q 003293 162 RARNIQNKPIVNRDPMSTEMLKMRQQLEFLQAELC 196 (833)
Q Consensus 162 rar~I~n~p~vn~d~~~~~i~~l~~~i~~L~~el~ 196 (833)
+|+.|+|+|++|.++ .++.+|+.++..|+.++.
T Consensus 318 ~ak~i~n~p~~n~~~--~~~~~l~~~i~~l~~~~~ 350 (364)
T d1sdma_ 318 RVRSIVNDPSKNVSS--KEVARLKKLVSYWKEQAG 350 (364)
T ss_dssp HHTTCCCCCCCCEEC--HHHHHHHTTTTCC-----
T ss_pred HHhhcccCCcccCCH--HHHHHHHHHHHHHHHHHH
Confidence 999999999999765 456777777777766653
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| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
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| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
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| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
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