Citrus Sinensis ID: 003413
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 822 | 2.2.26 [Sep-21-2011] | |||||||
| Q7ZXX2 | 997 | Kinesin-like protein KIF1 | N/A | no | 0.403 | 0.332 | 0.495 | 3e-84 | |
| Q99PT9 | 997 | Kinesin-like protein KIF1 | yes | no | 0.451 | 0.372 | 0.454 | 3e-82 | |
| Q2TAC6 | 998 | Kinesin-like protein KIF1 | yes | no | 0.453 | 0.373 | 0.462 | 4e-82 | |
| Q86Y91 | 864 | Kinesin-like protein KIF1 | no | no | 0.403 | 0.384 | 0.456 | 1e-79 | |
| Q91WD7 | 886 | Kinesin-like protein KIF1 | no | no | 0.405 | 0.375 | 0.461 | 1e-79 | |
| Q8NI77 | 898 | Kinesin-like protein KIF1 | no | no | 0.401 | 0.367 | 0.456 | 7e-79 | |
| Q6PFD6 | 834 | Kinesin-like protein KIF1 | no | no | 0.454 | 0.448 | 0.426 | 1e-77 | |
| Q4KLL9 | 826 | Kinesin-like protein KIF1 | no | no | 0.461 | 0.458 | 0.416 | 6e-77 | |
| Q5ZLK6 | 797 | Kinesin-like protein KIF1 | no | no | 0.407 | 0.420 | 0.450 | 4e-76 | |
| P53086 | 805 | Kinesin-like protein KIP3 | yes | no | 0.346 | 0.354 | 0.526 | 6e-76 |
| >sp|Q7ZXX2|KIF19_XENLA Kinesin-like protein KIF19 OS=Xenopus laevis GN=kif19 PE=2 SV=1 | Back alignment and function desciption |
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Score = 313 bits (803), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 229/341 (67%), Gaps = 9/341 (2%)
Query: 212 RILVFVRLRPMSKKEKESGSRCCVRIVNKRDVYLTE-FANEHDYLRLKRLRGRHFTFDAS 270
++ V +R+RP+++ E G+ V+K+ V L + + D LR R R + + FD +
Sbjct: 11 QLTVALRIRPINETELAEGATIIAHKVDKQMVVLMDPMEDSDDILRANRSREKSYMFDVA 70
Query: 271 FPDSTSQHEVYSRTTADLVEAVLQGRNGSVFCYGATGAGKTYTMLGTIENPGVMVLAIKD 330
F + +Q VY TT L+E V+ G N +VF YG TG GKTYTMLGT PG+ + + D
Sbjct: 71 FDYTATQDTVYRFTTKGLIEGVISGYNATVFAYGPTGCGKTYTMLGTDWEPGIYIRTLND 130
Query: 331 LFTKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGRP-LVLREDKQGIL-AAGLTQYRAY 388
LF I + S D + V +SY+E+YNE +RDLL+P L LRED +G++ AG+T+
Sbjct: 131 LFKAIEETSDDMEYEVLMSYMEIYNEMIRDLLNPSLGYLDLREDSKGVIQVAGITEVSTI 190
Query: 389 STDEVMALLQRGNQNRTTEPTRANETSSRSHAILQVII--EYRVKDASMNIINRVGKLSL 446
+ E+M LL +GN+ RT EPT AN+TSSRSHAILQV + + RVK+ + + RVG+L +
Sbjct: 191 NAKEIMQLLMKGNRQRTQEPTAANKTSSRSHAILQVTVRQKSRVKNITQEV--RVGRLFM 248
Query: 447 IDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVE--GKKHIPYRNSKLTQLLK 504
IDLAGSERA T R LR EGA+INRSLLAL +CINAL E K++ YR+SKLT+LLK
Sbjct: 249 IDLAGSERASQTQNRGLRMKEGAHINRSLLALGNCINALSERGSNKYVNYRDSKLTRLLK 308
Query: 505 DSLGGACNTVMIANISPCNLSFGETQNTLHWADRAKEIRTK 545
DSLGG TVMIA+ISP + SF E++NTL +ADRAK I+T+
Sbjct: 309 DSLGGNSRTVMIAHISPASTSFEESRNTLTYADRAKNIKTR 349
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Xenopus laevis (taxid: 8355) |
| >sp|Q99PT9|KIF19_MOUSE Kinesin-like protein KIF19 OS=Mus musculus GN=Kif19 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q2TAC6|KIF19_HUMAN Kinesin-like protein KIF19 OS=Homo sapiens GN=KIF19 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q86Y91|KI18B_HUMAN Kinesin-like protein KIF18B OS=Homo sapiens GN=KIF18B PE=1 SV=3 | Back alignment and function description |
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| >sp|Q91WD7|KI18A_MOUSE Kinesin-like protein KIF18A OS=Mus musculus GN=Kif18a PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8NI77|KI18A_HUMAN Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF18A PE=1 SV=2 | Back alignment and function description |
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| >sp|Q6PFD6|KI18B_MOUSE Kinesin-like protein KIF18B OS=Mus musculus GN=Kif18b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q4KLL9|KI18B_RAT Kinesin-like protein KIF18B OS=Rattus norvegicus GN=Kif18b PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5ZLK6|KI18B_CHICK Kinesin-like protein KIF18B OS=Gallus gallus GN=KIF18B PE=2 SV=1 | Back alignment and function description |
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| >sp|P53086|KIP3_YEAST Kinesin-like protein KIP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KIP3 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 822 | ||||||
| 255541864 | 773 | Chromosome-associated kinesin KIF4A, put | 0.930 | 0.989 | 0.802 | 0.0 | |
| 225455818 | 761 | PREDICTED: uncharacterized protein LOC10 | 0.905 | 0.977 | 0.752 | 0.0 | |
| 224121344 | 784 | predicted protein [Populus trichocarpa] | 0.933 | 0.978 | 0.755 | 0.0 | |
| 449441135 | 756 | PREDICTED: kinesin-like protein KIF2C-li | 0.907 | 0.986 | 0.733 | 0.0 | |
| 449477482 | 759 | PREDICTED: kinesin-like protein KIF2C-li | 0.907 | 0.982 | 0.733 | 0.0 | |
| 297734150 | 761 | unnamed protein product [Vitis vinifera] | 0.849 | 0.917 | 0.716 | 0.0 | |
| 356513886 | 732 | PREDICTED: kinesin-like protein KIF18B-l | 0.854 | 0.959 | 0.683 | 0.0 | |
| 356565244 | 709 | PREDICTED: kinesin-like protein KIF18B-l | 0.818 | 0.949 | 0.687 | 0.0 | |
| 297850246 | 726 | hypothetical protein ARALYDRAFT_335111 [ | 0.847 | 0.960 | 0.646 | 0.0 | |
| 240254101 | 725 | ATP binding microtubule motor family pro | 0.846 | 0.96 | 0.643 | 0.0 |
| >gi|255541864|ref|XP_002511996.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis] gi|223549176|gb|EEF50665.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1242 bits (3214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/780 (80%), Positives = 680/780 (87%), Gaps = 15/780 (1%)
Query: 1 MPVSTRSQVTNHEEN--EQRTRTRHRSDQEDASSHVNVALRNPHHGLKEKMKALTLLYEQ 58
MPVSTRSQ +HE++ + RTR RS QED SH NV LRNPHHGLKEKMKALTLLYEQ
Sbjct: 1 MPVSTRSQNNSHEQSGTDPDQRTRSRSVQED--SHNNVPLRNPHHGLKEKMKALTLLYEQ 58
Query: 59 QKRASSAFRNQSPKPDEKRFATHPSVDLVNSC-KRED--KETKDSRLLQDVMKENSMSTM 115
QKRAS A+RNQSPKP+EKRF THPS DLV+SC KRE+ KE+K+S +VM+EN + +
Sbjct: 59 QKRASLAYRNQSPKPEEKRFLTHPSADLVSSCNKRENDFKESKESSEQDNVMRENIVPAV 118
Query: 116 PAPMGAKLPSSRVTRTFVLPQPPTEDAKENLLMGPDRILGFPSCPRKANVTTTVARKLSM 175
AK P+S VTRTFVLPQPP++DAKEN +MGPDR++GF + RKA+V+ TVARKLSM
Sbjct: 119 TTLPNAK-PNSIVTRTFVLPQPPSDDAKENFVMGPDRVIGFSTGLRKASVSNTVARKLSM 177
Query: 176 GSSVAQTELKGVTGDKNMQELEKPEAVLGKHVPSGSRILVFVRLRPMSKKEKESGSRCCV 235
GSSV Q E +G G+KN+QE+EK EAV GK+ GSRI VFVRLRPMSKKE+E+G RCCV
Sbjct: 178 GSSVPQAEPRGFLGNKNLQEVEKLEAVSGKNDDGGSRISVFVRLRPMSKKEREAGMRCCV 237
Query: 236 RIVNKRDVYLTEFANEHDYLRLKRLRGRHFTFDASFPDSTSQHEVYSRTTADLVEAVLQG 295
RIVN++DVYLTEFA+E+DYLRLKRLRGRHFTFD+SFPDSTSQ EVYS TTA+LVEAVLQG
Sbjct: 238 RIVNRKDVYLTEFAHENDYLRLKRLRGRHFTFDSSFPDSTSQQEVYSTTTAELVEAVLQG 297
Query: 296 RNGSVFCYGATGAGKTYTMLGTIENPGVMVLAIKDLFTKIRQRSCDGNHVVHLSYLEVYN 355
RNGSVFCYGATGAGKTYTMLGT+ENPGVMVLAIKDLFTKIRQRSCDGNHVVHLSYLEVYN
Sbjct: 298 RNGSVFCYGATGAGKTYTMLGTMENPGVMVLAIKDLFTKIRQRSCDGNHVVHLSYLEVYN 357
Query: 356 ETVRDLLSPGRPLVLREDKQGILAAGLTQYRAYSTDEVMALLQRGNQNRTTEPTRANETS 415
ETVRDLLSPGRPLVLREDKQGI+AAGLTQYRAYSTDEVMALLQRGNQNRTTEPTRANETS
Sbjct: 358 ETVRDLLSPGRPLVLREDKQGIIAAGLTQYRAYSTDEVMALLQRGNQNRTTEPTRANETS 417
Query: 416 SRSHAILQVIIEYRVKDASMNIINRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSL 475
SRSHAILQVI+EYRVKDASMNI+NRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSL
Sbjct: 418 SRSHAILQVIVEYRVKDASMNIVNRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSL 477
Query: 476 LALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPCNLSFGETQNTLHW 535
LALSSCINALVEGK+HIPYRNSKLTQLLKDSLGG CNT+MIANISP NLSFGETQNTLHW
Sbjct: 478 LALSSCINALVEGKRHIPYRNSKLTQLLKDSLGGTCNTIMIANISPSNLSFGETQNTLHW 537
Query: 536 ADRAKEIRTKEGEANEETLQVPDSGTDQAKLLLELQKENRELRVQMARQQQRLLALEAQA 595
ADRAKEIRTK EAN E Q+P+S DQAKLLLELQKENRELRVQ+ARQQQ+LL L+AQ+
Sbjct: 538 ADRAKEIRTKACEANAEIQQLPESEADQAKLLLELQKENRELRVQLARQQQKLLTLQAQS 597
Query: 596 LAAN-SPTPSSVSSLLTPPSTAHPNEKRKPRSSFLHGNCFTPELKRKVAPEGFRELQQTV 654
LAAN SPTPSSVSSLLTPPS A NEKRK R SFL NCFTPE +RKVA E RELQQ V
Sbjct: 598 LAANASPTPSSVSSLLTPPSNAQSNEKRKTRPSFLGRNCFTPESRRKVADETVRELQQNV 657
Query: 655 KTLEAEIEKMKKDHALQLKQKDDVIRELKRKSDKQLERGGTEGVKKSGVQTRATLRPKEK 714
K LEAEIE+MKKDHA QLKQKDD IREL RKSDK G G K+ V TRA+LRPKE
Sbjct: 658 KALEAEIERMKKDHAFQLKQKDDQIRELSRKSDKP---SGVSGAKR--VVTRASLRPKES 712
Query: 715 NTGELKSPSHRFRSPVPTTKKRSFWDITAANSPSVTALSGRKTRSHVIPEP-GPPSMLLQ 773
N GELKSPSHRFRSP+PT KKRSFWDIT ANSPSV L+GRKTRSHVI EP PSMLLQ
Sbjct: 713 NIGELKSPSHRFRSPIPTAKKRSFWDITTANSPSVATLNGRKTRSHVIVEPAAAPSMLLQ 772
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225455818|ref|XP_002272451.1| PREDICTED: uncharacterized protein LOC100259414 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224121344|ref|XP_002318559.1| predicted protein [Populus trichocarpa] gi|222859232|gb|EEE96779.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449441135|ref|XP_004138339.1| PREDICTED: kinesin-like protein KIF2C-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449477482|ref|XP_004155036.1| PREDICTED: kinesin-like protein KIF2C-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297734150|emb|CBI15397.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356513886|ref|XP_003525639.1| PREDICTED: kinesin-like protein KIF18B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356565244|ref|XP_003550852.1| PREDICTED: kinesin-like protein KIF18B-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|297850246|ref|XP_002893004.1| hypothetical protein ARALYDRAFT_335111 [Arabidopsis lyrata subsp. lyrata] gi|297338846|gb|EFH69263.1| hypothetical protein ARALYDRAFT_335111 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|240254101|ref|NP_173290.4| ATP binding microtubule motor family protein [Arabidopsis thaliana] gi|332191607|gb|AEE29728.1| ATP binding microtubule motor family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 822 | ||||||
| TAIR|locus:2027478 | 725 | AT1G18550 [Arabidopsis thalian | 0.708 | 0.802 | 0.693 | 1e-235 | |
| ZFIN|ZDB-GENE-080215-2 | 1015 | kif19 "kinesin family member 1 | 0.403 | 0.327 | 0.495 | 1.5e-83 | |
| UNIPROTKB|J9NX08 | 1000 | KIF19 "Uncharacterized protein | 0.403 | 0.332 | 0.486 | 4e-81 | |
| UNIPROTKB|Q7ZXX2 | 997 | kif19 "Kinesin-like protein KI | 0.434 | 0.358 | 0.471 | 9.5e-80 | |
| RGD|1559936 | 997 | Kif19 "kinesin family member 1 | 0.403 | 0.332 | 0.495 | 1.2e-79 | |
| UNIPROTKB|Q2TAC6 | 998 | KIF19 "Kinesin-like protein KI | 0.403 | 0.332 | 0.489 | 2e-79 | |
| ZFIN|ZDB-GENE-040426-862 | 895 | kif18a "kinesin family member | 0.435 | 0.4 | 0.473 | 2.5e-79 | |
| UNIPROTKB|E1BFF4 | 999 | KIF19 "Uncharacterized protein | 0.403 | 0.332 | 0.492 | 6.6e-79 | |
| UNIPROTKB|I3LEH8 | 1001 | KIF19 "Uncharacterized protein | 0.403 | 0.331 | 0.489 | 6.6e-79 | |
| MGI|MGI:2447024 | 997 | Kif19a "kinesin family member | 0.403 | 0.332 | 0.489 | 1.7e-78 |
| TAIR|locus:2027478 AT1G18550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2011 (713.0 bits), Expect = 1.0e-235, Sum P(3) = 1.0e-235
Identities = 427/616 (69%), Positives = 477/616 (77%)
Query: 169 VARKLSMGSSVAQTELKGVTGDKNMQELEKPEAVLGKHVPSGSRILVFVRLRPMSKKEKE 228
V RKLSMG+ G +N+ E EK E++ S SRILVFVRLRPM KKE+E
Sbjct: 123 VIRKLSMGN-----------GARNVSEAEKLESLNA----SVSRILVFVRLRPMGKKERE 167
Query: 229 SGSRCCVRIVNKRDVYLTEFANEHDYLRLKRLRGRHFTFDASFPDSTSQHEVYSRTTADL 288
+GSRCCV+++NKRDVYLTEF NE+DYLRLKRLR RHFTFD+SFP++T+Q EVYS TT DL
Sbjct: 168 NGSRCCVKVLNKRDVYLTEFTNENDYLRLKRLRVRHFTFDSSFPETTTQQEVYSTTTGDL 227
Query: 289 VEAVLQGRNGSVFCYGATGAGKTYTMLGTIENPGVMVLAIKDLFTKIRQRSCDGNHVVHL 348
VEAVL+GRNGSVFCYGATGAGKTYTMLGT+ENPGVMVLAIKDLF K+RQRS DGNHVVHL
Sbjct: 228 VEAVLEGRNGSVFCYGATGAGKTYTMLGTMENPGVMVLAIKDLFAKVRQRSLDGNHVVHL 287
Query: 349 SYLEVYNETVRDLLSPGRPLVLREDKQGILAAGLTQYRAYSTDEVMALLQRGNQNRTTEP 408
SYLEVYNETVRDLLSPGRPL+LREDKQGI+AAGLTQYRAYSTDEVMALLQRGNQNRTTEP
Sbjct: 288 SYLEVYNETVRDLLSPGRPLILREDKQGIVAAGLTQYRAYSTDEVMALLQRGNQNRTTEP 347
Query: 409 TRANETSSRSHAILQVIIEYRVKDASMNIINRVGKLSLIDLAGSERALATDQRTLRSLEG 468
TR NETSSRSHAILQVI+EY+ +DASMNII+RVGKLSLIDLAGSERALATDQRTLRSLEG
Sbjct: 348 TRCNETSSRSHAILQVIVEYKTRDASMNIISRVGKLSLIDLAGSERALATDQRTLRSLEG 407
Query: 469 ANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPCNLSFGE 528
ANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGG+CNTVMIANISP + SFGE
Sbjct: 408 ANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGSCNTVMIANISPSSQSFGE 467
Query: 529 TQNTLHWADRAKEIRTKEGEANEETLQV-PDSGTDQAKLLLELQKENREXXXXXXXXXXX 587
TQNTLHWADRAKEIR KE E NEE +QV + G DQAKLLLELQKEN E
Sbjct: 468 TQNTLHWADRAKEIRVKECEVNEEVVQVGEEEGADQAKLLLELQKENSELRVQLAKQQQK 527
Query: 588 XXXXXXXX-XXXNXXXXXXXXXXXXXXXXAHPN-----EKRKPRSSFLHGNCFTPE-LKR 640
N P+ +K+KPR S L G CFTPE LKR
Sbjct: 528 LLTLQAENIAAANNNNNISLTPPSISSLMTPPSALTAQQKKKPRHSLLSGTCFTPESLKR 587
Query: 641 KVAPEGFRELQQTVKTLEAEIEKMKKDHALQLK-QKDDVIREL-KRKSDKQLERGGTEGV 698
A E +ELQ TVK L+ E+E+MK++H LQ+K QKD+++++L RKS+K ER +
Sbjct: 588 TKAEEAVKELQLTVKALKMEMERMKREHGLQMKKQKDELMKDLCSRKSEKTPER--CKET 645
Query: 699 KKSGVQTRATLRPKEKNTGELKSPSHRFRSPVPTTKKRSFWDITAAN-SPSVTALSGRKT 757
++ + TR +LRPKEK ELKSPSHRF SPV KKRSFWDIT AN SP AL RKT
Sbjct: 646 RR--IVTRGSLRPKEKEK-ELKSPSHRFASPVAAAKKRSFWDITVANTSP---ALDRRKT 699
Query: 758 RSHVIPEPGPPSMLLQ 773
RSH + PS LLQ
Sbjct: 700 RSHGLVHQEAPSKLLQ 715
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| ZFIN|ZDB-GENE-080215-2 kif19 "kinesin family member 19" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9NX08 KIF19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7ZXX2 kif19 "Kinesin-like protein KIF19" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
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| RGD|1559936 Kif19 "kinesin family member 19" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2TAC6 KIF19 "Kinesin-like protein KIF19" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-862 kif18a "kinesin family member 18A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BFF4 KIF19 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LEH8 KIF19 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:2447024 Kif19a "kinesin family member 19A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 822 | |||
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 1e-179 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-134 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-128 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-125 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 1e-100 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 2e-97 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 6e-97 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 1e-91 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 6e-91 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 1e-87 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 1e-84 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 2e-83 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 5e-83 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 3e-81 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 6e-72 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 2e-70 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 2e-66 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 1e-46 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 7e-35 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 2e-06 |
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
Score = 516 bits (1332), Expect = e-179
Identities = 193/338 (57%), Positives = 245/338 (72%), Gaps = 7/338 (2%)
Query: 212 RILVFVRLRPMSKKEKESGSRCCVRIVNKRDVYLTEFANEHD--YLRLKRLRGRHFTFDA 269
+ V VR+RP ++KEK+ G+R V++V+ R + E LR +R + ++FD
Sbjct: 1 SLTVAVRVRPFNEKEKQEGTRRVVKVVDDRMLVFDPKDEEDAFRNLRARRNKELKYSFDR 60
Query: 270 SFPDSTSQHEVYSRTTADLVEAVLQGRNGSVFCYGATGAGKTYTMLGTIENPGVMVLAIK 329
F ++++Q EVY TT LV+ VL G N +VF YGATGAGKT+TMLGT +PG+MVL +K
Sbjct: 61 VFDETSTQEEVYENTTKPLVDGVLNGYNATVFAYGATGAGKTHTMLGTDSDPGLMVLTMK 120
Query: 330 DLFTKIRQRSCDGNHVVHLSYLEVYNETVRDLLSP-GRPLVLRED-KQGILAAGLTQYRA 387
DLF KI +R D V LSYLE+YNET+RDLLSP PL LRED QGI+ AGLT+++
Sbjct: 121 DLFDKIEERKDDKEFEVSLSYLEIYNETIRDLLSPSSGPLELREDPNQGIVVAGLTEHQP 180
Query: 388 YSTDEVMALLQRGNQNRTTEPTRANETSSRSHAILQVIIEYRVKDASMNIINRVGKLSLI 447
S +E++ LL +GN+NRT EPT AN TSSRSHA+LQ+ + + + AS+N R+GKLSLI
Sbjct: 181 KSAEEILELLMKGNRNRTQEPTEANATSSRSHAVLQITVRQKDRTASINQQVRIGKLSLI 240
Query: 448 DLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKK---HIPYRNSKLTQLLK 504
DLAGSERA AT+ R R EGANINRSLLAL +CINALV+GKK HIPYR+SKLT+LLK
Sbjct: 241 DLAGSERASATNNRGQRLKEGANINRSLLALGNCINALVDGKKKNKHIPYRDSKLTRLLK 300
Query: 505 DSLGGACNTVMIANISPCNLSFGETQNTLHWADRAKEI 542
DSLGG C TVMIANISP + + ET NTL +A+RAK I
Sbjct: 301 DSLGGNCKTVMIANISPSSSHYEETHNTLKYANRAKNI 338
|
The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 338 |
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 822 | |||
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 97.71 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 95.53 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 92.57 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 92.25 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 90.95 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 90.8 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 89.37 | |
| PRK06620 | 214 | hypothetical protein; Validated | 88.79 | |
| PRK12377 | 248 | putative replication protein; Provisional | 87.75 | |
| PRK08116 | 268 | hypothetical protein; Validated | 87.29 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 86.98 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 86.85 | |
| COG1474 | 366 | CDC6 Cdc6-related protein, AAA superfamily ATPase | 86.6 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 85.94 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 85.65 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 85.56 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 85.25 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 85.19 | |
| PRK06526 | 254 | transposase; Provisional | 85.04 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 85.03 | |
| PRK09087 | 226 | hypothetical protein; Validated | 84.9 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 84.88 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 84.28 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 83.58 | |
| PF05673 | 249 | DUF815: Protein of unknown function (DUF815); Inte | 83.57 | |
| COG0593 | 408 | DnaA ATPase involved in DNA replication initiation | 83.2 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 82.35 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 81.65 | |
| TIGR00631 | 655 | uvrb excinuclease ABC, B subunit. This family is b | 81.41 | |
| PRK08939 | 306 | primosomal protein DnaI; Reviewed | 81.35 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 80.52 |
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-91 Score=788.56 Aligned_cols=361 Identities=43% Similarity=0.616 Sum_probs=325.4
Q ss_pred CCCCeEEEEEcCCCCchhhhcCCceEEEEecCc-eeEEeeccCcchhhhhcccCCeeeEeccccCCCCchhHHhhhhHHH
Q 003413 209 SGSRILVFVRLRPMSKKEKESGSRCCVRIVNKR-DVYLTEFANEHDYLRLKRLRGRHFTFDASFPDSTSQHEVYSRTTAD 287 (822)
Q Consensus 209 ~~~~IrV~VRVRPl~~~E~~~g~~~~V~v~~~~-~v~l~~~~~~~~~~~~~~~~~k~F~FD~VF~~~asQeeVF~~~v~p 287 (822)
...+|+|+|||||++..+...+...++.++... .+.+..+... ....++.|+||.||+++++|++||+.++.|
T Consensus 3 ~~~~v~vvvr~rPl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~ftfD~vf~~~stQ~dvy~~~~~~ 76 (574)
T KOG4280|consen 3 PACKVKVVVRVRPLSAAERSELLKSILSVDPAHGRVSLKNPVAG------IEGKPKSFTFDAVFDSDSTQDDVYQETVAP 76 (574)
T ss_pred cccceeEEEeecCCCchhhhhhhccccccccccceeeecCCccc------ccCCCCCceeeeeecCCCCHHHHHHHHhHH
Confidence 356899999999999999888887777776443 3333332211 124567899999999999999999999999
Q ss_pred HHHHHHcCCCceeeeeccCCCCcceeeccc-CCCCchHHHHHHHHHHhhhhcCCCCcEEEEEEEEEEecceeeecCCCCC
Q 003413 288 LVEAVLQGRNGSVFCYGATGAGKTYTMLGT-IENPGVMVLAIKDLFTKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGR 366 (822)
Q Consensus 288 LV~svL~GyN~tIfAYGQTGSGKTyTM~G~-~e~~GIIpRal~~LF~~i~~~~~~~~~~V~vS~lEIYNE~V~DLL~p~~ 366 (822)
+|++||+|||+||||||||||||||||+|. ++..|||||+|++||.+|........|.|+|||+|||||.|+|||++..
T Consensus 77 lV~svl~GyNgtvFaYGQTGsGKTyTM~G~~~~~~GiiPraf~~LF~~I~~~~~~~~f~vrvS~lEiYnE~i~DLL~~~~ 156 (574)
T KOG4280|consen 77 LVESVLEGYNGTVFAYGQTGSGKTYTMIGPDPELRGLIPRAFEHLFRHIDERKEKTRFLVRVSYLEIYNESIRDLLSPVN 156 (574)
T ss_pred HHHHHhcccCceEEEeccCCCCCceEeeCCChhhCCchhHHHHHHHHHHHhccccceEEEEeehHHHHhHHHHHHhCccC
Confidence 999999999999999999999999999999 6668999999999999999887666899999999999999999999876
Q ss_pred --CceEeeCC-CCeEecCcEEEEcCCHHHHHHHHHhhhccCcccccCCCCCCCCceeEEEEEEEEEeecCCCceeeEEee
Q 003413 367 --PLVLREDK-QGILAAGLTQYRAYSTDEVMALLQRGNQNRTTEPTRANETSSRSHAILQVIIEYRVKDASMNIINRVGK 443 (822)
Q Consensus 367 --~L~ired~-~Gv~V~gLtev~V~S~eE~~~lL~~G~~nR~v~sT~~N~~SSRSH~IftI~V~~~~~~~~~~~~~~~Sk 443 (822)
.+.+++++ .|+||+||+++.|.++++++.+|..|.++|.+++|.||..|||||+||+|+|++......+....+.|+
T Consensus 157 ~~~l~lre~p~~Gv~V~nlse~~v~s~~d~~~~l~~G~~nR~vgat~mn~~SsRSH~ift~~i~~~~~~~~~~~~~~~~r 236 (574)
T KOG4280|consen 157 PKGLELREDPKCGVYVENLSEMDVESAEDAQQLLVVGLANRRVGATSMNEESSRSHAIFTIHIESSEKSDGGLMSGRSSK 236 (574)
T ss_pred cCCceeeEcCCCceEecCcceeecCCHHHHHHHHHHHHhhcchhhccCCcccccceEEEEEEEEeecccCCCccccccce
Confidence 79999998 599999999999999999999999999999999999999999999999999999443332333567899
Q ss_pred EEEeecCCCcccccccchhhhhHHHHhhhhhHHHHHHHHHHHhcCCC-CCCccCchhhhhhhhccCCCceeeEEEeeCCC
Q 003413 444 LSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKK-HIPYRNSKLTQLLKDSLGGACNTVMIANISPC 522 (822)
Q Consensus 444 L~LVDLAGSER~~kt~~~g~rlkE~~~INkSLsaLg~VI~ALa~~~~-hIPYRdSKLTrLLqDSLGGnskT~mIa~ISPs 522 (822)
|+|||||||||+.++++.|.|++|+.+||+||++||+||.+|+++++ ||||||||||+||||||||||+|+|||||+|+
T Consensus 237 lnlvDLagsEr~~~tga~G~rlkEa~~IN~SLs~LG~vI~aLvd~~~~HIPYRdSkLT~LLqdSLGGN~kT~mianvsp~ 316 (574)
T KOG4280|consen 237 LNLVDLAGSERQSKTGAEGERLKEATNINLSLSALGNVISALVDGSKTHIPYRDSKLTRLLQDSLGGNSKTTMIANVSPS 316 (574)
T ss_pred eeeeeccchhhhcccCccchhhhhhcccchhHHHHHHHHHHHhccccCCCCcchhHHHHHHHHHcCCCceEEEEEecCch
Confidence 99999999999999999999999999999999999999999999887 99999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhhhhhcccccccccccCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 003413 523 NLSFGETQNTLHWADRAKEIRTKEGEANEETLQVPDSGTDQAKLLLELQKENRELRVQMARQQ 585 (822)
Q Consensus 523 ~~~~eETLsTLrFA~Rak~Iknk~~~~ne~~~~~~~~~~d~~~li~eLq~Ei~~Lr~eL~~~q 585 (822)
..+++||++||+||+|||.|+|+|+ +|+++. ...+++|++||+.||.+|+...
T Consensus 317 ~~~~~ETlsTLrfA~Rak~I~nk~~-ined~~---------~~~~~~lq~ei~~Lk~~l~~~~ 369 (574)
T KOG4280|consen 317 SDNYEETLSTLRFAQRAKAIKNKPV-INEDPK---------DALLRELQEEIERLKKELDPGG 369 (574)
T ss_pred hhhhHHHHHHHHHHHHHHHhhcccc-ccCCcc---------hhhHHHHHHHHHHHHHhhcccc
Confidence 9999999999999999999999995 777764 4689999999999999987643
|
|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >PF05673 DUF815: Protein of unknown function (DUF815); InterPro: IPR008533 This domain consists of several bacterial proteins of unknown function | Back alignment and domain information |
|---|
| >COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >TIGR00631 uvrb excinuclease ABC, B subunit | Back alignment and domain information |
|---|
| >PRK08939 primosomal protein DnaI; Reviewed | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 822 | ||||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 1e-78 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 9e-67 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-61 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-56 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-56 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-55 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 3e-55 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 4e-55 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 4e-55 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 2e-54 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 3e-53 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 2e-52 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 2e-52 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 7e-52 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 1e-51 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 1e-51 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-51 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 1e-51 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 1e-51 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 1e-51 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 1e-51 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 1e-51 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 2e-51 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 2e-51 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 2e-51 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 3e-51 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 3e-51 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 5e-51 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 4e-50 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 4e-50 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 1e-49 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 7e-49 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 1e-48 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 2e-48 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 3e-48 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 4e-48 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 1e-43 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 3e-42 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 1e-41 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 2e-41 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 2e-41 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 6e-41 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 1e-40 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 5e-38 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 7e-38 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 9e-37 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 2e-36 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 5e-36 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 4e-35 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 4e-35 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 6e-35 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-34 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-34 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-34 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 6e-34 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 3e-28 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 4e-13 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 1e-12 |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
|
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
Score = 487 bits (1255), Expect = e-167
Identities = 156/348 (44%), Positives = 220/348 (63%), Gaps = 14/348 (4%)
Query: 209 SGSRILVFVRLRPMSKKEKESGSRCCVRIVNKRDVYLTEFANEHDYLRL----------K 258
+ V VR+RP + KEK +G V +V+K + E + K
Sbjct: 8 LCHHMKVVVRVRPENTKEKAAGFHKVVHVVDKHILVFDPKQEEVSFFHGKKTTNQNVIKK 67
Query: 259 RLRGRHFTFDASFPDSTSQHEVYSRTTADLVEAVLQGRNGSVFCYGATGAGKTYTMLGTI 318
+ + F FDA F ++++Q EV+ TT ++ + L G N +V YGATGAGKT+TMLG+
Sbjct: 68 QNKDLKFVFDAVFDETSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSA 127
Query: 319 ENPGVMVLAIKDLFTKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGRPLVLRED-KQGI 377
+ PGVM L + L+ + + + +SYLEVYNE +RDLL PL +RED ++G+
Sbjct: 128 DEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNSGPLAVREDTQKGV 187
Query: 378 LAAGLTQYRAYSTDEVMALLQRGNQNRTTEPTRANETSSRSHAILQVIIEYRVKDASMNI 437
+ GLT ++ S++E++ LL GN+NRT PT N TSSRSHA+ Q+ + + K AS+N
Sbjct: 188 VVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASINQ 247
Query: 438 INRVGKLSLIDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKK---HIPY 494
R+ K+SLIDLAGSERA + + R +EG NINRSLLAL + INAL + K+ HIPY
Sbjct: 248 NVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSKRKNQHIPY 307
Query: 495 RNSKLTQLLKDSLGGACNTVMIANISPCNLSFGETQNTLHWADRAKEI 542
RNSKLT+LLKDSLGG C T+MIA +SP ++ + +T NTL +A+RAK+I
Sbjct: 308 RNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355
|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* Length = 180 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 822 | |||
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 100.0 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 100.0 | |
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 100.0 | |
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 100.0 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 100.0 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 100.0 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 100.0 | |
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 100.0 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 100.0 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 100.0 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 100.0 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 100.0 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 100.0 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 100.0 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 100.0 | |
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 100.0 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 100.0 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 100.0 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 100.0 | |
| 3nwn_A | 359 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 100.0 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 100.0 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 100.0 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 100.0 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 100.0 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 100.0 | |
| 4h1g_A | 715 | Maltose binding protein-cakar3 motor domain fusio; | 100.0 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 99.95 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 99.94 | |
| 2o0a_A | 298 | S.cerevisiae chromosome XVI reading frame ORF YPL2 | 99.92 | |
| 3ec2_A | 180 | DNA replication protein DNAC; helicase loader, rep | 93.13 | |
| 2w58_A | 202 | DNAI, primosome component (helicase loader); ATP-b | 91.62 | |
| 2qgz_A | 308 | Helicase loader, putative primosome component; str | 90.0 | |
| 1jbk_A | 195 | CLPB protein; beta barrel, chaperone; 1.80A {Esche | 84.71 | |
| 2r62_A | 268 | Cell division protease FTSH homolog; ATPase domain | 83.93 | |
| 4b4t_M | 434 | 26S protease regulatory subunit 6A; hydrolase, AAA | 83.09 | |
| 3te6_A | 318 | Regulatory protein SIR3; heterochromatin, gene sil | 82.38 | |
| 2p65_A | 187 | Hypothetical protein PF08_0063; CLPB, malaria, str | 81.88 | |
| 3t15_A | 293 | Ribulose bisphosphate carboxylase/oxygenase activ | 81.32 | |
| 2bjv_A | 265 | PSP operon transcriptional activator; AAA, transcr | 80.74 |
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-90 Score=756.43 Aligned_cols=341 Identities=43% Similarity=0.632 Sum_probs=279.5
Q ss_pred CCCeEEEEEcCCCCchhhhcCCceEEEEec-CceeEEeeccCcchhhhhcccCCeeeEeccccCCCCchhHHhhhhHHHH
Q 003413 210 GSRILVFVRLRPMSKKEKESGSRCCVRIVN-KRDVYLTEFANEHDYLRLKRLRGRHFTFDASFPDSTSQHEVYSRTTADL 288 (822)
Q Consensus 210 ~~~IrV~VRVRPl~~~E~~~g~~~~V~v~~-~~~v~l~~~~~~~~~~~~~~~~~k~F~FD~VF~~~asQeeVF~~~v~pL 288 (822)
.++|+|+|||||++..|...+...||.+.+ ...|.+..+...... .......+.|+||+||+++++|++||+.++.|+
T Consensus 3 ~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~v~v~~~~~~~~~-~~~~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~pl 81 (350)
T 2vvg_A 3 SDNIKVIVRCRPLNARETRENALNIIRMDEASAQVIVDPPEQEKSA-TQAKKVPRTFTFDAVYDQTSCNYGIFQASFKPL 81 (350)
T ss_dssp -CBCEEEEEECCCCHHHHHTTCCBCEEEEGGGTEEEECC---------------EEEECSEEECTTCCHHHHHHHTTHHH
T ss_pred CCCeEEEEEeCCCChhhhccCCceEEEEcCCCCEEEEeeccccccc-cccCCCceEeeCCEEECCCcchhHHHHHHHHHH
Confidence 478999999999999999888888888764 345666544321111 111234689999999999999999999999999
Q ss_pred HHHHHcCCCceeeeeccCCCCcceeecccCCCCchHHHHHHHHHHhhhhcCCCCcEEEEEEEEEEecceeeecCCCCCCc
Q 003413 289 VEAVLQGRNGSVFCYGATGAGKTYTMLGTIENPGVMVLAIKDLFTKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGRPL 368 (822)
Q Consensus 289 V~svL~GyN~tIfAYGQTGSGKTyTM~G~~e~~GIIpRal~~LF~~i~~~~~~~~~~V~vS~lEIYNE~V~DLL~p~~~L 368 (822)
|+++|+|||+||||||||||||||||+|+.+++|||||++++||+.+........|.|++||+|||||+|+|||++...+
T Consensus 82 v~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~l 161 (350)
T 2vvg_A 82 IDAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSSSSNQNFLVIGSYLELYNEEIRDLIKNNTKL 161 (350)
T ss_dssp HHHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTCCTTEEEEEEEEEEEEETTEEEETTTTEEEE
T ss_pred HHHHhCCCceeEEeecCCCCCCCEEeecCCccCchHHHHHHHHHHHHHhhccCCcEEEEEEEEEEeCCEEEEcccCCcCc
Confidence 99999999999999999999999999999999999999999999999877677899999999999999999999988889
Q ss_pred eEeeCCC-CeEecCcEEEEcCCHHHHHHHHHhhhccCcccccCCCCCCCCceeEEEEEEEEEeecCCCceeeEEeeEEEe
Q 003413 369 VLREDKQ-GILAAGLTQYRAYSTDEVMALLQRGNQNRTTEPTRANETSSRSHAILQVIIEYRVKDASMNIINRVGKLSLI 447 (822)
Q Consensus 369 ~ired~~-Gv~V~gLtev~V~S~eE~~~lL~~G~~nR~v~sT~~N~~SSRSH~IftI~V~~~~~~~~~~~~~~~SkL~LV 447 (822)
.+++++. |++|.||+++.|.|++|++.+|..|.++|++++|.||..|||||+||+|.|++.....+.. ....|+|+||
T Consensus 162 ~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~-~~~~skl~lV 240 (350)
T 2vvg_A 162 PLKEDKTRGIYVDGLSMHRVTTAAELSALMDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENKE-VIRVGKLNLV 240 (350)
T ss_dssp CEEEETTTEEEETTCCCEEESSHHHHHHHHHHHHHHC----------CTTCEEEEEEEEEEEEC----C-EEEEEEEEEE
T ss_pred eeeEcCCCCEEecCCEEEEcCCHHHHHHHHHHHHhccccccccCCCCCCcceEEEEEEEEEeeccCCCc-cEEEEEEEEE
Confidence 9999875 8999999999999999999999999999999999999999999999999998876543222 3568999999
Q ss_pred ecCCCcccccccchhhhhHHHHhhhhhHHHHHHHHHHHhcCCCCCCccCchhhhhhhhccCCCceeeEEEeeCCCCCCHH
Q 003413 448 DLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPCNLSFG 527 (822)
Q Consensus 448 DLAGSER~~kt~~~g~rlkE~~~INkSLsaLg~VI~ALa~~~~hIPYRdSKLTrLLqDSLGGnskT~mIa~ISPs~~~~e 527 (822)
|||||||..++++.|.+++|+.+||+||++||+||.+|++++.||||||||||+||||+|||||+|+|||||||+..+++
T Consensus 241 DLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~vI~aL~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP~~~~~~ 320 (350)
T 2vvg_A 241 DLAGSERQSKTGATGETLVEGAKINLSLSALGLVISKLVEGATHIPYRDSKLTRLLQDSLGGNSKTLMCANISPASTNYD 320 (350)
T ss_dssp ECCCCCC---------------CTTHHHHHHHHHHHHHHHTCSSCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHH
T ss_pred eCCCCCccccccccHHHHHHHHHHhHHHHHHHHHHHHHHcCCCCCCccccHHHHHHHHhcCCCccEEEEEEeCCccccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhcccccccccc
Q 003413 528 ETQNTLHWADRAKEIRTKEGEANEET 553 (822)
Q Consensus 528 ETLsTLrFA~Rak~Iknk~~~~ne~~ 553 (822)
||++||+||+|||+|+|+|. +|+++
T Consensus 321 ETl~TL~fA~rak~i~n~~~-~n~~~ 345 (350)
T 2vvg_A 321 ETMSTLRYADRAKQIKNKPR-INEDP 345 (350)
T ss_dssp HHHHHHHHHHHHTTCBCCCC-CCBSC
T ss_pred HHHHHHHHHHHHhhccccce-ecCCc
Confidence 99999999999999999995 66654
|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* | Back alignment and structure |
|---|
| >3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* | Back alignment and structure |
|---|
| >4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* | Back alignment and structure |
|---|
| >2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} | Back alignment and structure |
|---|
| >1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20 | Back alignment and structure |
|---|
| >2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* | Back alignment and structure |
|---|
| >4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A | Back alignment and structure |
|---|
| >2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 822 | ||||
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 7e-83 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 2e-78 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 1e-77 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 3e-77 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 4e-77 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 8e-74 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 2e-71 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 6e-68 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 3e-66 |
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Human (Homo sapiens) [TaxId: 9606]
Score = 265 bits (679), Expect = 7e-83
Identities = 114/335 (34%), Positives = 171/335 (51%), Gaps = 23/335 (6%)
Query: 213 ILVFVRLRPMSKKEKESGSRCCVRIVNKRDVYLTEFANEHDYLRLKRLRGRHFTFDASFP 272
I V R RP+++ E G + + + V + + + FD F
Sbjct: 7 IKVMCRFRPLNESEVNRGDKYIAKFQGEDTVVIAS---------------KPYAFDRVFQ 51
Query: 273 DSTSQHEVYSRTTADLVEAVLQGRNGSVFCYGATGAGKTYTMLGT---IENPGVMVLAIK 329
STSQ +VY+ +V+ VL+G NG++F YG T +GKT+TM G E G++ ++
Sbjct: 52 SSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQ 111
Query: 330 DLFTKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGRP--LVLREDKQGILAAGLTQYRA 387
D+F I + + +SY E+Y + +RDLL + V + + G T+
Sbjct: 112 DIFNYIYSMDENLEFHIKVSYFEIYLDKIRDLLDVSKTNLSVHEDKNRVPYVKGCTERFV 171
Query: 388 YSTDEVMALLQRGNQNRTTEPTRANETSSRSHAILQVIIEYRVKDASMNIINRVGKLSLI 447
S DEVM + G NR T NE SSRSH+I + ++ GKL L+
Sbjct: 172 CSPDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQK---LSGKLYLV 228
Query: 448 DLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSL 507
DLAGSE+ T E NIN+SL AL + I+AL EG ++PYR+SK+T++L+DSL
Sbjct: 229 DLAGSEKVSKTGAEGAVLDEAKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSL 288
Query: 508 GGACNTVMIANISPCNLSFGETQNTLHWADRAKEI 542
GG C T ++ SP + + ET++TL + RAK I
Sbjct: 289 GGNCRTTIVICCSPSSYNESETKSTLLFGQRAKTI 323
|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 822 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 92.27 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 91.57 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 89.7 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 86.54 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 83.05 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 82.62 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 80.59 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=3.1e-83 Score=700.58 Aligned_cols=345 Identities=35% Similarity=0.522 Sum_probs=300.9
Q ss_pred CeEEEEEcCCCCchhhhcCCceEEEEecCceeEEeeccCcchhhhhcccCCeeeEeccccCCCCchhHHhhhhHHHHHHH
Q 003413 212 RILVFVRLRPMSKKEKESGSRCCVRIVNKRDVYLTEFANEHDYLRLKRLRGRHFTFDASFPDSTSQHEVYSRTTADLVEA 291 (822)
Q Consensus 212 ~IrV~VRVRPl~~~E~~~g~~~~V~v~~~~~v~l~~~~~~~~~~~~~~~~~k~F~FD~VF~~~asQeeVF~~~v~pLV~s 291 (822)
+|+|+|||||+.+.|...+...+|.+.+...+...... ...+.|+||+||+++++|++||+. +.|+|++
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~----------~~~~~f~FD~vf~~~~~q~~vy~~-v~~lv~~ 69 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKD----------DKAKQHMYDRVFDGNATQDDVFED-TKYLVQS 69 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSS----------SSEEEEECSEEECTTCCHHHHHHT-TTHHHHH
T ss_pred CeEEEEEcCCCChhhcccCCCCeEEeCCCCeEEecCCC----------CCceEEECCeecCCCCCHHHHHHH-HHHHHHH
Confidence 59999999999999988888888887776665443211 235799999999999999999987 5899999
Q ss_pred HHcCCCceeeeeccCCCCcceeecccCCCCchHHHHHHHHHHhhhhcCCCCcEEEEEEEEEEecceeeecCCCCC----C
Q 003413 292 VLQGRNGSVFCYGATGAGKTYTMLGTIENPGVMVLAIKDLFTKIRQRSCDGNHVVHLSYLEVYNETVRDLLSPGR----P 367 (822)
Q Consensus 292 vL~GyN~tIfAYGQTGSGKTyTM~G~~e~~GIIpRal~~LF~~i~~~~~~~~~~V~vS~lEIYNE~V~DLL~p~~----~ 367 (822)
+++|||+||||||||||||||||+|+.+++|||||++.+||..+........|.|++||+|||||+|+|||.+.. .
T Consensus 70 ~l~G~n~~i~aYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~ 149 (364)
T d1sdma_ 70 AVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLK 149 (364)
T ss_dssp HHTTCEEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCC
T ss_pred HhcCCceeeeccccCCCCcccccccCccccchhHHHHHHHHhhhhhccccccceEEEEEEEEeccccccccCcccccccc
Confidence 999999999999999999999999999999999999999999998887778899999999999999999998753 5
Q ss_pred ceEeeCCC-CeEecCcEEEEcCCHHHHHHHHHhhhccCcccccCCCCCCCCceeEEEEEEEEEeecCCCceeeEEeeEEE
Q 003413 368 LVLREDKQ-GILAAGLTQYRAYSTDEVMALLQRGNQNRTTEPTRANETSSRSHAILQVIIEYRVKDASMNIINRVGKLSL 446 (822)
Q Consensus 368 L~ired~~-Gv~V~gLtev~V~S~eE~~~lL~~G~~nR~v~sT~~N~~SSRSH~IftI~V~~~~~~~~~~~~~~~SkL~L 446 (822)
+.+++++. |++|.|++++.|.+.+|++.+|..|.++|.+++|.+|..|||||+||+|.+.+...+.. ....|+|+|
T Consensus 150 l~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~~---~~~~~kl~~ 226 (364)
T d1sdma_ 150 LDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQ---AIARGKLSF 226 (364)
T ss_dssp CEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTTC---CEEEEEEEE
T ss_pred cceeecccCccccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccCcc---eeeeEEEEe
Confidence 78888865 89999999999999999999999999999999999999999999999999988776543 356799999
Q ss_pred eecCCCcccccccchhhhhHHHHhhhhhHHHHHHHHHHHhcCCCCCCccCchhhhhhhhccCCCceeeEEEeeCCCCCCH
Q 003413 447 IDLAGSERALATDQRTLRSLEGANINRSLLALSSCINALVEGKKHIPYRNSKLTQLLKDSLGGACNTVMIANISPCNLSF 526 (822)
Q Consensus 447 VDLAGSER~~kt~~~g~rlkE~~~INkSLsaLg~VI~ALa~~~~hIPYRdSKLTrLLqDSLGGnskT~mIa~ISPs~~~~ 526 (822)
||||||||..+++..|.+++|+.+||+||++|++||.+|+++..|||||+||||+||+|+|||||+|+|||||||+..++
T Consensus 227 vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~ 306 (364)
T d1sdma_ 227 VDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNL 306 (364)
T ss_dssp EECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTCSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGH
T ss_pred echhhccccccccccCceeeeccccccchhhHHHHHHHHHcCCCcCCchhhhhhHHHHhhcCCCceEEEEEEeCCCcchH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhcccccccccccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 003413 527 GETQNTLHWADRAKEIRTKEGEANEETLQVPDSGTDQAKLLLELQKENRELRVQMA 582 (822)
Q Consensus 527 eETLsTLrFA~Rak~Iknk~~~~ne~~~~~~~~~~d~~~li~eLq~Ei~~Lr~eL~ 582 (822)
+||++||+||+||++|+|+|. .|+.. ..+.+|++|+..|+.++.
T Consensus 307 ~eTl~TL~fa~~ak~i~n~p~-~n~~~-----------~~~~~l~~~i~~l~~~~~ 350 (364)
T d1sdma_ 307 DETHNSLTYASRVRSIVNDPS-KNVSS-----------KEVARLKKLVSYWKEQAG 350 (364)
T ss_dssp HHHHHHHHHHHHHTTCCCCCC-CCEEC-----------HHHHHHHTTTTCC-----
T ss_pred HHHHHHHHHHHHHhhcccCCc-ccCCH-----------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999995 45432 346777778888877654
|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|