Citrus Sinensis ID: 003426
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 821 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FPT1 | 1116 | Ubiquitin carboxyl-termin | yes | no | 0.974 | 0.716 | 0.879 | 0.0 | |
| Q84WU2 | 1115 | Ubiquitin carboxyl-termin | no | no | 0.974 | 0.717 | 0.858 | 0.0 | |
| Q4VSI4 | 1103 | Ubiquitin carboxyl-termin | yes | no | 0.861 | 0.640 | 0.408 | 1e-144 | |
| Q6A4J8 | 1103 | Ubiquitin carboxyl-termin | yes | no | 0.861 | 0.640 | 0.408 | 1e-144 | |
| Q93009 | 1102 | Ubiquitin carboxyl-termin | yes | no | 0.861 | 0.641 | 0.407 | 1e-144 | |
| Q6U7I1 | 1101 | Ubiquitin carboxyl-termin | yes | no | 0.859 | 0.641 | 0.404 | 1e-142 | |
| Q9UTT1 | 1129 | Ubiquitin carboxyl-termin | yes | no | 0.883 | 0.642 | 0.388 | 1e-141 | |
| Q09879 | 1108 | Probable ubiquitin carbox | no | no | 0.868 | 0.643 | 0.392 | 1e-136 | |
| Q9VYQ8 | 1129 | Ubiquitin carboxyl-termin | yes | no | 0.791 | 0.575 | 0.404 | 1e-129 | |
| P50101 | 1230 | Ubiquitin carboxyl-termin | yes | no | 0.913 | 0.609 | 0.349 | 1e-127 |
| >sp|Q9FPT1|UBP12_ARATH Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=1 SV=2 | Back alignment and function desciption |
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Score = 1456 bits (3768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/805 (87%), Positives = 752/805 (93%), Gaps = 5/805 (0%)
Query: 1 MTMMTPPPLDQ-EEEEMLVPHSDIVEGP-QPMEVVSQVEPASTVENQQVEDPPTMKFTWT 58
MTMMTPPP+DQ E+EEMLVP+SD+V+GP QPMEV ASTVENQ EDPPT+KFTWT
Sbjct: 1 MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 60
Query: 59 IENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSGTLPYGWSRYAQF 118
I NFSR NT+KHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 61 IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 120
Query: 119 SLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDSVVVEAEVA 178
SLAVVNQIH++Y++RK+TQHQFNARESDWGFTSFMPL +LYDPSRGYLVND+V+VEAEVA
Sbjct: 121 SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 180
Query: 179 VRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSG 238
VRKVLDYWSYDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+
Sbjct: 181 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 240
Query: 239 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 298
SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 241 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
Query: 299 VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE 358
VVEGTIQQLFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC+DVYASFDKYVEVERLE
Sbjct: 301 VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 360
Query: 359 GDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLD 418
GDNKYHAE HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRD MVKINDRYEFPL+LDLD
Sbjct: 361 GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
Query: 419 RENGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 478
RE+GKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 421 REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 479 VKRALEEQYGGEEELPPTNPGFNNT-PFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 537
+KRALEEQYGGEEELP TNPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
Sbjct: 481 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540
Query: 538 EHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFR 597
EHLR+RLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDL EQIG+DIYFDLVDHDKVRSFR
Sbjct: 541 EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 600
Query: 598 VQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVS 657
+QKQT F FKEE+AKEFG+P+QLQRFWIWAKRQNHTYRPNRPL PQEE Q VGQ+RE S
Sbjct: 601 IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 660
Query: 658 NKTHTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSK 717
NK +TAEL+LFLEVE DL PI PP+KSK+DILLFFKLYDPEK L Y GRL +KSSSK
Sbjct: 661 NKANTAELKLFLEVEHL-DLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 719
Query: 718 PIEILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSP 777
P++I KLN+M GF PDEEIEL+EEIKFEPCVMCEHLDK+TSFRL QIEDGDIICFQK P
Sbjct: 720 PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 778
Query: 778 PLESEQECRYPDVPSFLEYVHNRQV 802
+ E EC YP VPSFLEYV NRQ+
Sbjct: 779 LVNKEIECLYPAVPSFLEYVQNRQL 803
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Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 4EC: .EC: 1EC: 9EC: .EC: 1EC: 2 |
| >sp|Q84WU2|UBP13_ARATH Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q4VSI4|UBP7_RAT Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus GN=Usp7 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q6A4J8|UBP7_MOUSE Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q93009|UBP7_HUMAN Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q6U7I1|UBP7_CHICK Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9UTT1|UBP21_SCHPO Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp21 PE=3 SV=2 | Back alignment and function description |
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| >sp|Q09879|UBP5_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ubp5 PE=3 SV=3 | Back alignment and function description |
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| >sp|Q9VYQ8|UBP7_DROME Ubiquitin carboxyl-terminal hydrolase 7 OS=Drosophila melanogaster GN=Usp7 PE=1 SV=1 | Back alignment and function description |
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| >sp|P50101|UBP15_YEAST Ubiquitin carboxyl-terminal hydrolase 15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBP15 PE=1 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 821 | ||||||
| 255566265 | 1120 | Ubiquitin carboxyl-terminal hydrolase, p | 0.975 | 0.715 | 0.933 | 0.0 | |
| 449437528 | 1110 | PREDICTED: LOW QUALITY PROTEIN: ubiquiti | 0.971 | 0.718 | 0.913 | 0.0 | |
| 224138194 | 1117 | predicted protein [Populus trichocarpa] | 0.993 | 0.730 | 0.898 | 0.0 | |
| 296089314 | 1116 | unnamed protein product [Vitis vinifera] | 0.976 | 0.718 | 0.899 | 0.0 | |
| 225439303 | 1117 | PREDICTED: ubiquitin carboxyl-terminal h | 0.976 | 0.717 | 0.899 | 0.0 | |
| 224091501 | 1239 | predicted protein [Populus trichocarpa] | 0.975 | 0.646 | 0.832 | 0.0 | |
| 312282613 | 1115 | unnamed protein product [Thellungiella h | 0.974 | 0.717 | 0.888 | 0.0 | |
| 297810771 | 1115 | ubiquitin-specific protease 12 [Arabidop | 0.974 | 0.717 | 0.886 | 0.0 | |
| 30681531 | 1115 | ubiquitin carboxyl-terminal hydrolase 12 | 0.974 | 0.717 | 0.879 | 0.0 | |
| 359487017 | 1115 | PREDICTED: ubiquitin carboxyl-terminal h | 0.975 | 0.718 | 0.870 | 0.0 |
| >gi|255566265|ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis] gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1552 bits (4019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 749/802 (93%), Positives = 777/802 (96%), Gaps = 1/802 (0%)
Query: 1 MTMMTPPPLDQEEEEMLVPHSDIVEGPQPMEVVSQVEPASTVENQQVEDPPTMKFTWTIE 60
MTMMTPPPLDQE+EEMLVPHSD+VEGPQPMEV +QVEPASTVENQ VEDPP+MKFTWTIE
Sbjct: 1 MTMMTPPPLDQEDEEMLVPHSDLVEGPQPMEV-AQVEPASTVENQPVEDPPSMKFTWTIE 59
Query: 61 NFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSGTLPYGWSRYAQFSL 120
NFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDV+DS TLPYGWSRYAQFSL
Sbjct: 60 NFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDSSTLPYGWSRYAQFSL 119
Query: 121 AVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDSVVVEAEVAVR 180
AVVNQIH+KYSIRKDTQHQFNARESDWGFTSFMPL DLYDPSRGYLVND+V+VEAEVAVR
Sbjct: 120 AVVNQIHNKYSIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTVIVEAEVAVR 179
Query: 181 KVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSI 240
KVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND+P+GSI
Sbjct: 180 KVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTGSI 239
Query: 241 PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 300
PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV
Sbjct: 240 PLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVV 299
Query: 301 EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD 360
EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD
Sbjct: 300 EGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGD 359
Query: 361 NKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRE 420
NKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRD MVKINDRYEFPLQLDLDRE
Sbjct: 360 NKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRE 419
Query: 421 NGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVK 480
NGKYLSP+ADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQW+KFDDERVTKED+K
Sbjct: 420 NGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDMK 479
Query: 481 RALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL 540
RALEEQYGGEEEL TNPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL
Sbjct: 480 RALEEQYGGEEELQQTNPGFNNAPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL 539
Query: 541 RIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFRVQK 600
RIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDL EQIGRDIYFDLVDHDKVR+FR+QK
Sbjct: 540 RIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGRDIYFDLVDHDKVRNFRIQK 599
Query: 601 QTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKT 660
QT F FKEE+AKEFGIP+Q QRFWIWAKRQNHTYRPNRPL PQEEAQ+VGQLRE SNK
Sbjct: 600 QTPFNFFKEEVAKEFGIPVQFQRFWIWAKRQNHTYRPNRPLTPQEEAQSVGQLREASNKA 659
Query: 661 HTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSKPIE 720
H+AEL+LFLEVE G DL PIAPPDK+K+DILLFFKLY PEKGELRY+GRLF+KSS KPIE
Sbjct: 660 HSAELKLFLEVELGLDLRPIAPPDKTKEDILLFFKLYVPEKGELRYIGRLFVKSSGKPIE 719
Query: 721 ILRKLNQMAGFDPDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLE 780
IL KLN+MAGF DEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLE
Sbjct: 720 ILAKLNEMAGFATDEEIELYEEIKFEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLE 779
Query: 781 SEQECRYPDVPSFLEYVHNRQV 802
E++C+YPDVPSFLEYVHNRQV
Sbjct: 780 VEEDCKYPDVPSFLEYVHNRQV 801
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449437528|ref|XP_004136544.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 12-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224138194|ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|222867383|gb|EEF04514.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|296089314|emb|CBI39086.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225439303|ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224091501|ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|222855251|gb|EEE92798.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|312282613|dbj|BAJ34172.1| unnamed protein product [Thellungiella halophila] | Back alignment and taxonomy information |
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| >gi|297810771|ref|XP_002873269.1| ubiquitin-specific protease 12 [Arabidopsis lyrata subsp. lyrata] gi|297319106|gb|EFH49528.1| ubiquitin-specific protease 12 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|30681531|ref|NP_850783.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] gi|13430572|gb|AAK25908.1|AF360198_1 putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gi|23296847|gb|AAN13185.1| putative ubiquitin-specific protease UBP12 [Arabidopsis thaliana] gi|332003657|gb|AED91040.1| ubiquitin carboxyl-terminal hydrolase 12 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|359487017|ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis vinifera] gi|296084432|emb|CBI24991.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 821 | ||||||
| TAIR|locus:2144118 | 1116 | UBP12 "ubiquitin-specific prot | 0.974 | 0.716 | 0.803 | 0.0 | |
| TAIR|locus:2081501 | 1115 | UBP13 "ubiquitin-specific prot | 0.974 | 0.717 | 0.784 | 0.0 | |
| DICTYBASE|DDB_G0276443 | 1306 | usp7 "putative ubiquitin carbo | 0.529 | 0.333 | 0.489 | 3.1e-140 | |
| SGD|S000004920 | 1230 | UBP15 "Ubiquitin-specific prot | 0.583 | 0.389 | 0.411 | 4.5e-119 | |
| ZFIN|ZDB-GENE-030131-3656 | 1110 | usp7 "ubiquitin specific pepti | 0.907 | 0.671 | 0.361 | 3.3e-118 | |
| POMBASE|SPBC713.02c | 1129 | ubp15 "ubiquitin C-terminal hy | 0.805 | 0.585 | 0.368 | 4.7e-118 | |
| CGD|CAL0000934 | 1382 | orf19.1777 [Candida albicans ( | 0.574 | 0.341 | 0.405 | 5.8e-114 | |
| POMBASE|SPCC188.08c | 1108 | ubp5 "ubiquitin C-terminal hyd | 0.874 | 0.648 | 0.359 | 1.2e-113 | |
| UNIPROTKB|Q93009 | 1102 | USP7 "Ubiquitin carboxyl-termi | 0.673 | 0.501 | 0.403 | 2.1e-107 | |
| UNIPROTKB|F1N556 | 1086 | USP7 "Ubiquitin carboxyl-termi | 0.657 | 0.497 | 0.408 | 2.7e-107 |
| TAIR|locus:2144118 UBP12 "ubiquitin-specific protease 12" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 3404 (1203.3 bits), Expect = 0., P = 0.
Identities = 647/805 (80%), Positives = 689/805 (85%)
Query: 1 MTMMTPPPLDQ-EEEEMLVPHSDIVEGP-QPMEVVSQVEPASTVENQQVEDPPTMKFTWT 58
MTMMTPPP+DQ E+EEMLVP+SD+V+GP QPMEV ASTVENQ EDPPT+KFTWT
Sbjct: 1 MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT 60
Query: 59 IENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSGTLPYGWSRYAQF 118
I NFSR NT+KHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDV+D+ +LPYGWSRYAQF
Sbjct: 61 IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF 120
Query: 119 SLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDSXXXXXXXX 178
SLAVVNQIH++Y++RK+TQHQFNARESDWGFTSFMPL +LYDPSRGYLVND+
Sbjct: 121 SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA 180
Query: 179 XRKVLDYWSYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSG 238
RKVLDYWSYDSKKETG+VGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTEND P+
Sbjct: 181 VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA 240
Query: 239 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 298
SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
Sbjct: 241 SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT 300
Query: 299 VVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLE 358
VVEGTIQQLFEGHHMNYIECINVD+KSTRKESFYDLQLDVKGC+DVYASFDKYVEVERLE
Sbjct: 301 VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE 360
Query: 359 GDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLD 418
GDNKYHAE HGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRD MVKINDRYEFPL+LDLD
Sbjct: 361 GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD 420
Query: 419 RENGKYLSPDADRSVRNLYTXXXXXXXXXXXXXXXYYAFIRPTLSDQWYKFDDERVTKED 478
RE+GKYLSPDADRSVRNLYT YYAFIRPTLSDQWYKFDDERVTKED
Sbjct: 421 REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED 480
Query: 479 VKRALEEQYGGEEELXXXXXXXXXXX-XXXXKYSNAYMLVYIRESDKDKIICNVDEKDIA 537
+KRALEEQYGGEEEL KYSNAYMLVYIRESDKDKIICNVDEKDIA
Sbjct: 481 LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA 540
Query: 538 EHLRIRLXXXXXXXXXXRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDKVRSFR 597
EHLR+RL RRYKAQAHLYTIIKVARDEDL EQIG+DIYFDLVDHDKVRSFR
Sbjct: 541 EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR 600
Query: 598 VQKQTSFMAFKEEIAKEFGIPIQLQRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVS 657
+QKQT F FKEE+AKEFG+P+QLQRFWIWAKRQNHTYRPNRPL PQEE Q VGQ+RE S
Sbjct: 601 IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS 660
Query: 658 NKTHTAELRLFLEVEFGPDLHPIAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSK 717
NK +TAEL+LFLEVE DL PI PP+KSK+DILLFFKLYDPEK L Y GRL +KSSSK
Sbjct: 661 NKANTAELKLFLEVEH-LDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSK 719
Query: 718 PIEILRKLNQMAGXXXXXXXXXXXXXXXXXCVMCEHLDKRTSFRLSQIEDGDIICFQKSP 777
P++I KLN+M G CVMCEHLDK+TSFRL QIEDGDIICFQK P
Sbjct: 720 PMDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQK-P 778
Query: 778 PLESEQECRYPDVPSFLEYVHNRQV 802
+ E EC YP VPSFLEYV NRQ+
Sbjct: 779 LVNKEIECLYPAVPSFLEYVQNRQL 803
|
|
| TAIR|locus:2081501 UBP13 "ubiquitin-specific protease 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0276443 usp7 "putative ubiquitin carboxyl-terminal hydrolase (UCH)" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| SGD|S000004920 UBP15 "Ubiquitin-specific protease involved in protein deubiquitination" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-030131-3656 usp7 "ubiquitin specific peptidase 7 (herpes virus-associated)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPBC713.02c ubp15 "ubiquitin C-terminal hydrolase Ubp15" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0000934 orf19.1777 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPCC188.08c ubp5 "ubiquitin C-terminal hydrolase Ubp5" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q93009 USP7 "Ubiquitin carboxyl-terminal hydrolase 7" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1N556 USP7 "Ubiquitin carboxyl-terminal hydrolase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9FPT1 | UBP12_ARATH | 3, ., 4, ., 1, 9, ., 1, 2 | 0.8795 | 0.9744 | 0.7168 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.4.19 | 0.976 |
| 3rd Layer | 3.4.19.12 | 0.991 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 821 | |||
| COG5077 | 1089 | COG5077, COG5077, Ubiquitin carboxyl-terminal hydr | 0.0 | |
| cd02659 | 334 | cd02659, peptidase_C19C, A subfamily of Peptidase | 1e-168 | |
| pfam00443 | 313 | pfam00443, UCH, Ubiquitin carboxyl-terminal hydrol | 2e-73 | |
| cd02257 | 255 | cd02257, Peptidase_C19, Peptidase C19 contains ubi | 3e-60 | |
| cd02668 | 324 | cd02668, Peptidase_C19L, A subfamily of Peptidase | 2e-52 | |
| cd02661 | 304 | cd02661, Peptidase_C19E, A subfamily of Peptidase | 2e-43 | |
| cd00121 | 126 | cd00121, MATH, MATH (meprin and TRAF-C homology) d | 6e-41 | |
| cd02663 | 300 | cd02663, Peptidase_C19G, A subfamily of Peptidase | 8e-37 | |
| cd02660 | 328 | cd02660, Peptidase_C19D, A subfamily of Peptidase | 1e-33 | |
| cd02674 | 230 | cd02674, Peptidase_C19R, A subfamily of peptidase | 1e-32 | |
| cd02657 | 305 | cd02657, Peptidase_C19A, A subfamily of Peptidase | 8e-31 | |
| cd02664 | 327 | cd02664, Peptidase_C19H, A subfamily of Peptidase | 3e-30 | |
| cd03775 | 134 | cd03775, MATH_Ubp21p, Ubiquitin-specific protease | 6e-28 | |
| cd02667 | 279 | cd02667, Peptidase_C19K, A subfamily of Peptidase | 2e-27 | |
| cd02671 | 332 | cd02671, Peptidase_C19O, A subfamily of Peptidase | 2e-25 | |
| pfam13423 | 296 | pfam13423, UCH_1, Ubiquitin carboxyl-terminal hydr | 6e-21 | |
| cd03772 | 137 | cd03772, MATH_HAUSP, Herpesvirus-associated ubiqui | 2e-17 | |
| pfam00917 | 116 | pfam00917, MATH, MATH domain | 2e-17 | |
| smart00061 | 95 | smart00061, MATH, meprin and TRAF homology | 3e-17 | |
| COG5533 | 415 | COG5533, UBP5, Ubiquitin C-terminal hydrolase [Pos | 1e-15 | |
| cd02665 | 228 | cd02665, Peptidase_C19I, A subfamily of Peptidase | 2e-15 | |
| COG5560 | 823 | COG5560, UBP12, Ubiquitin C-terminal hydrolase [Po | 7e-14 | |
| cd02662 | 240 | cd02662, Peptidase_C19F, A subfamily of Peptidase | 9e-14 | |
| cd02658 | 311 | cd02658, Peptidase_C19B, A subfamily of Peptidase | 3e-13 | |
| cd02666 | 343 | cd02666, Peptidase_C19J, A subfamily of Peptidase | 8e-10 | |
| cd03773 | 132 | cd03773, MATH_TRIM37, Tripartite motif containing | 7e-08 | |
| cd03774 | 139 | cd03774, MATH_SPOP, Speckle-type POZ protein (SPOP | 6e-07 | |
| COG5560 | 823 | COG5560, UBP12, Ubiquitin C-terminal hydrolase [Po | 6e-06 | |
| pfam12436 | 35 | pfam12436, USP7, Ubiquitin-specific protease 7 | 2e-05 | |
| cd00270 | 149 | cd00270, MATH_TRAF_C, Tumor Necrosis Factor Recept | 4e-04 | |
| COG5207 | 749 | COG5207, UBP14, Isopeptidase T [Posttranslational | 4e-04 |
| >gnl|CDD|227409 COG5077, COG5077, Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Score = 583 bits (1504), Expect = 0.0
Identities = 309/791 (39%), Positives = 441/791 (55%), Gaps = 39/791 (4%)
Query: 46 QVEDPPTMKFTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADS 105
VE+ M FTW ++ +S L KK S F VGG+ W+I++FP+GNN ++S+YL+
Sbjct: 32 DVEELLEMSFTWKVKRWSEL-AKKVESPPFSVGGHTWKIILFPQGNNQCNVSVYLEYEPQ 90
Query: 106 GTLPYGWSRY---AQFSLAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPS 162
G Y AQF+ + N + + H+F+ +DWGFT+F+ L L +PS
Sbjct: 91 ELEETGGKYYDCCAQFAFDISNPKYPTIEYINKSHHRFSMESTDWGFTNFIDLNKLIEPS 150
Query: 163 RG---YLVNDSVVVEAEVAVRK----VL--DYWSYDSKKETGYVGLKNQGATCYMNSLLQ 213
G +L ++V+ V V K VL + +Y+SKKETGYVGL+NQGATCYMNSLLQ
Sbjct: 151 PGRPPFLEEGTLVITVYVRVLKDPTGVLWHSFLNYNSKKETGYVGLRNQGATCYMNSLLQ 210
Query: 214 TLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYD 273
+L+ I FRK VY +PT ++ S+ LALQ LFY LQ + V T ELT+SFGWD+ D
Sbjct: 211 SLFFIAKFRKDVYGIPT-DHPRGRDSVALALQRLFYNLQTGEEPVDTTELTRSFGWDSDD 269
Query: 274 SFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYD 333
SFMQHD+QE NRVL + LE M+GTVVE + +F G +YI+C+NV+Y+S R E F+D
Sbjct: 270 SFMQHDIQEFNRVLQDNLEKSMRGTVVENALNGIFVGKMKSYIKCVNVNYESARVEDFWD 329
Query: 334 LQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRF 393
+QL+VKG +++ SF +Y++VE L+GDN+Y+AE+HGLQDAKKGV+F PPVL LQLKRF
Sbjct: 330 IQLNVKGMKNLQESFRRYIQVETLDGDNRYNAEKHGLQDAKKGVIFESLPPVLHLQLKRF 389
Query: 394 EYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRS--VRNLYTLHSVLVHSGGVHG 451
EYDF RD MVKINDRYEFPL++DL +L DAD+S +Y L+ VLVHSG +H
Sbjct: 390 EYDFERDMMVKINDRYEFPLEIDLL----PFLDRDADKSENSDAVYVLYGVLVHSGDLHE 445
Query: 452 GHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYS 511
GHYYA ++P +WYKFDD RVT+ K LEE +GG+ P + +++ K ++
Sbjct: 446 GHYYALLKPEKDGRWYKFDDTRVTRATEKEVLEENFGGDH--PYKDKIRDHSGIK--RFM 501
Query: 512 NAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVAR 571
+AYMLVY+R+S D ++ V DI H+ L +E ++ E + + + HLY +++
Sbjct: 502 SAYMLVYLRKSMLDDLLNPVAAVDIPPHVEEVLSEEIDKTEVRCKEIDEIHLYRGVRLYT 561
Query: 572 DEDLAEQIGRDIYFDLVDHDK---VRSFRVQKQTSFMAFKEEIAKEFGIPIQLQ-RFWIW 627
+ G D Y D + F +++ + IA+ P L R W
Sbjct: 562 IDSFIHYHGFD-YPDFSSELNDSGLAQFVIKRGAKISDLRNNIAEHLNTPQSLYLREWTM 620
Query: 628 AKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELRLFLE--VEFGPDLHPIAPPDK 685
KR N T R +RP T +L ++ +T ELR +LE +E
Sbjct: 621 IKRHNKTVRVDRPC--NRVNITTRELVGMNTRT-GEELRSYLERIIEHNQLDSQRKVALT 677
Query: 686 SKDDILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIKF 745
I +F K +D + G L + K I + + + LYEEIK
Sbjct: 678 KDGVINIFVKYFDYTTQPISGFGGLHVNKFLKISSISPWIED--SISSNLPLTLYEEIKP 735
Query: 746 EPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLESEQECRYPDVPSFLEYVHNRQVQNM 805
M + + +F S+I GDIICF+ +E + Y +++ R +
Sbjct: 736 G---MVDTIGDNITFIGSEIGTGDIICFEVPGAVEFDTSSAYDSALKLYDFLQGRVLVAF 792
Query: 806 WKFSINSNHNI 816
+FS N+
Sbjct: 793 RRFSDEYRENV 803
|
Length = 1089 |
| >gnl|CDD|239124 cd02659, peptidase_C19C, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|215922 pfam00443, UCH, Ubiquitin carboxyl-terminal hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|239072 cd02257, Peptidase_C19, Peptidase C19 contains ubiquitinyl hydrolases | Back alignment and domain information |
|---|
| >gnl|CDD|239133 cd02668, Peptidase_C19L, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239126 cd02661, Peptidase_C19E, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|238068 cd00121, MATH, MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins | Back alignment and domain information |
|---|
| >gnl|CDD|239128 cd02663, Peptidase_C19G, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239125 cd02660, Peptidase_C19D, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239139 cd02674, Peptidase_C19R, A subfamily of peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239122 cd02657, Peptidase_C19A, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239129 cd02664, Peptidase_C19H, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239744 cd03775, MATH_Ubp21p, Ubiquitin-specific protease 21 (Ubp21p) family, MATH domain; composed of fungal proteins with similarity to Ubp21p of fission yeast | Back alignment and domain information |
|---|
| >gnl|CDD|239132 cd02667, Peptidase_C19K, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239136 cd02671, Peptidase_C19O, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|222118 pfam13423, UCH_1, Ubiquitin carboxyl-terminal hydrolase | Back alignment and domain information |
|---|
| >gnl|CDD|239741 cd03772, MATH_HAUSP, Herpesvirus-associated ubiquitin-specific protease (HAUSP, also known as USP7) family, N-terminal MATH (TRAF-like) domain; composed of proteins similar to human HAUSP, an enzyme that specifically catalyzes the deubiquitylation of p53 and MDM2, hence playing an important role in the p53-MDM2 pathway | Back alignment and domain information |
|---|
| >gnl|CDD|216189 pfam00917, MATH, MATH domain | Back alignment and domain information |
|---|
| >gnl|CDD|214496 smart00061, MATH, meprin and TRAF homology | Back alignment and domain information |
|---|
| >gnl|CDD|227820 COG5533, UBP5, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|239130 cd02665, Peptidase_C19I, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|227847 COG5560, UBP12, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|239127 cd02662, Peptidase_C19F, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239123 cd02658, Peptidase_C19B, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239131 cd02666, Peptidase_C19J, A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >gnl|CDD|239742 cd03773, MATH_TRIM37, Tripartite motif containing protein 37 (TRIM37) family, MATH domain; TRIM37 is a peroxisomal protein and is a member of the tripartite motif (TRIM) protein subfamily, also known as the RING-B-box-coiled-coil (RBCC) subfamily of zinc-finger proteins | Back alignment and domain information |
|---|
| >gnl|CDD|239743 cd03774, MATH_SPOP, Speckle-type POZ protein (SPOP) family, MATH domain; composed of proteins with similarity to human SPOP | Back alignment and domain information |
|---|
| >gnl|CDD|227847 COG5560, UBP12, Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|204918 pfam12436, USP7, Ubiquitin-specific protease 7 | Back alignment and domain information |
|---|
| >gnl|CDD|238168 cd00270, MATH_TRAF_C, Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link cell surface TNFRs and receptors of the interleukin-1/Toll-like family to downstream kinase signaling cascades which results in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses in the immune and inflammatory systems | Back alignment and domain information |
|---|
| >gnl|CDD|227532 COG5207, UBP14, Isopeptidase T [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 821 | |||
| COG5077 | 1089 | Ubiquitin carboxyl-terminal hydrolase [Posttransla | 100.0 | |
| KOG1863 | 1093 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 100.0 | |
| cd02659 | 334 | peptidase_C19C A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02668 | 324 | Peptidase_C19L A subfamily of Peptidase C19. Pepti | 100.0 | |
| KOG4598 | 1203 | consensus Putative ubiquitin-specific protease [Po | 100.0 | |
| cd02664 | 327 | Peptidase_C19H A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02663 | 300 | Peptidase_C19G A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02671 | 332 | Peptidase_C19O A subfamily of Peptidase C19. Pepti | 100.0 | |
| KOG1865 | 545 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 100.0 | |
| cd02657 | 305 | Peptidase_C19A A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02660 | 328 | Peptidase_C19D A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02667 | 279 | Peptidase_C19K A subfamily of Peptidase C19. Pepti | 100.0 | |
| KOG1866 | 944 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 100.0 | |
| cd02661 | 304 | Peptidase_C19E A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02658 | 311 | Peptidase_C19B A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02669 | 440 | Peptidase_C19M A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02662 | 240 | Peptidase_C19F A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02666 | 343 | Peptidase_C19J A subfamily of Peptidase C19. Pepti | 100.0 | |
| cd02665 | 228 | Peptidase_C19I A subfamily of Peptidase C19. Pepti | 100.0 | |
| COG5533 | 415 | UBP5 Ubiquitin C-terminal hydrolase [Posttranslati | 100.0 | |
| cd02674 | 230 | Peptidase_C19R A subfamily of peptidase C19. Pepti | 100.0 | |
| COG5560 | 823 | UBP12 Ubiquitin C-terminal hydrolase [Posttranslat | 100.0 | |
| PF12436 | 249 | USP7_ICP0_bdg: ICP0-binding domain of Ubiquitin-sp | 100.0 | |
| PF00443 | 269 | UCH: Ubiquitin carboxyl-terminal hydrolase; InterP | 100.0 | |
| cd02673 | 245 | Peptidase_C19Q A subfamily of Peptidase C19. Pepti | 100.0 | |
| KOG0944 | 763 | consensus Ubiquitin-specific protease UBP14 [Postt | 100.0 | |
| KOG1868 | 653 | consensus Ubiquitin C-terminal hydrolase [Posttran | 100.0 | |
| cd02257 | 255 | Peptidase_C19 Peptidase C19 contains ubiquitinyl h | 100.0 | |
| KOG1867 | 492 | consensus Ubiquitin-specific protease [Posttransla | 100.0 | |
| cd02672 | 268 | Peptidase_C19P A subfamily of Peptidase C19. Pepti | 100.0 | |
| COG5207 | 749 | UBP14 Isopeptidase T [Posttranslational modificati | 100.0 | |
| KOG1873 | 877 | consensus Ubiquitin-specific protease [Posttransla | 100.0 | |
| PF13423 | 295 | UCH_1: Ubiquitin carboxyl-terminal hydrolase | 99.97 | |
| cd02670 | 241 | Peptidase_C19N A subfamily of Peptidase C19. Pepti | 99.97 | |
| KOG1864 | 587 | consensus Ubiquitin-specific protease [Posttransla | 99.97 | |
| KOG1870 | 842 | consensus Ubiquitin C-terminal hydrolase [Posttran | 99.97 | |
| KOG1872 | 473 | consensus Ubiquitin-specific protease [Posttransla | 99.94 | |
| KOG1871 | 420 | consensus Ubiquitin-specific protease [Posttransla | 99.93 | |
| cd03772 | 137 | MATH_HAUSP Herpesvirus-associated ubiquitin-specif | 99.91 | |
| cd03775 | 134 | MATH_Ubp21p Ubiquitin-specific protease 21 (Ubp21p | 99.91 | |
| KOG2026 | 442 | consensus Spindle pole body protein - Sad1p [Cytos | 99.86 | |
| cd03774 | 139 | MATH_SPOP Speckle-type POZ protein (SPOP) family, | 99.84 | |
| cd03773 | 132 | MATH_TRIM37 Tripartite motif containing protein 37 | 99.83 | |
| cd00270 | 149 | MATH_TRAF_C Tumor Necrosis Factor Receptor (TNFR)- | 99.79 | |
| cd03776 | 147 | MATH_TRAF6 Tumor Necrosis Factor Receptor (TNFR)-A | 99.77 | |
| cd03780 | 148 | MATH_TRAF5 Tumor Necrosis Factor Receptor (TNFR)-A | 99.77 | |
| cd00121 | 126 | MATH MATH (meprin and TRAF-C homology) domain; an | 99.76 | |
| cd03779 | 147 | MATH_TRAF1 Tumor Necrosis Factor Receptor (TNFR) A | 99.76 | |
| cd03777 | 186 | MATH_TRAF3 Tumor Necrosis Factor Receptor (TNFR)-A | 99.76 | |
| cd03781 | 154 | MATH_TRAF4 Tumor Necrosis Factor Receptor (TNFR)-A | 99.75 | |
| cd03771 | 167 | MATH_Meprin Meprin family, MATH domain; Meprins ar | 99.72 | |
| PF00917 | 119 | MATH: MATH domain; InterPro: IPR002083 Although ap | 99.71 | |
| KOG1275 | 1118 | consensus PAB-dependent poly(A) ribonuclease, subu | 99.7 | |
| cd03778 | 164 | MATH_TRAF2 Tumor Necrosis Factor Receptor (TNFR) A | 99.68 | |
| smart00061 | 95 | MATH meprin and TRAF homology. | 99.62 | |
| cd03783 | 167 | MATH_Meprin_Alpha Meprin family, Alpha subunit, MA | 99.39 | |
| cd03782 | 167 | MATH_Meprin_Beta Meprin family, Beta subunit, MATH | 99.37 | |
| PF15499 | 275 | Peptidase_C98: Ubiquitin-specific peptidase-like, | 98.48 | |
| KOG1987 | 297 | consensus Speckle-type POZ protein SPOP and relate | 98.02 | |
| KOG1864 | 587 | consensus Ubiquitin-specific protease [Posttransla | 96.1 | |
| KOG1887 | 806 | consensus Ubiquitin carboxyl-terminal hydrolase [P | 94.32 | |
| PF11976 | 72 | Rad60-SLD: Ubiquitin-2 like Rad60 SUMO-like; Inter | 93.07 | |
| PF08715 | 320 | Viral_protease: Papain like viral protease; InterP | 92.9 | |
| PF14533 | 213 | USP7_C2: Ubiquitin-specific protease C-terminal; P | 92.21 | |
| PF11543 | 80 | UN_NPL4: Nuclear pore localisation protein NPL4; I | 92.18 | |
| PF05408 | 193 | Peptidase_C28: Foot-and-mouth virus L-proteinase; | 90.08 | |
| cd01763 | 87 | Sumo Small ubiquitin-related modifier (SUMO). Smal | 89.76 | |
| KOG3556 | 724 | consensus Familial cylindromatosis protein [Genera | 89.72 | |
| PF08817 | 79 | YukD: WXG100 protein secretion system (Wss), prote | 89.17 | |
| KOG0297 | 391 | consensus TNF receptor-associated factor [Signal t | 88.65 | |
| cd06406 | 80 | PB1_P67 A PB1 domain is present in p67 proteins wh | 87.79 | |
| PF14560 | 87 | Ubiquitin_2: Ubiquitin-like domain; PDB: 1WJN_A 2K | 84.8 | |
| PF00240 | 69 | ubiquitin: Ubiquitin family; InterPro: IPR000626 U | 84.1 | |
| cd01805 | 77 | RAD23_N Ubiquitin-like domain of RAD23. RAD23 belo | 83.66 | |
| cd01796 | 71 | DDI1_N DNA damage inducible protein 1 ubiquitin-li | 82.6 | |
| cd01809 | 72 | Scythe_N Ubiquitin-like domain of Scythe protein. | 81.89 | |
| cd01793 | 74 | Fubi Fubi ubiquitin-like protein. Fubi is a ubiqui | 81.86 | |
| PTZ00044 | 76 | ubiquitin; Provisional | 81.85 | |
| cd01812 | 71 | BAG1_N Ubiquitin-like domain of BAG1. BAG1_N N-ter | 81.57 | |
| cd01794 | 70 | DC_UbP_C dendritic cell derived ubiquitin-like pro | 81.55 | |
| PF12436 | 249 | USP7_ICP0_bdg: ICP0-binding domain of Ubiquitin-sp | 81.33 | |
| cd01791 | 73 | Ubl5 UBL5 ubiquitin-like modifier. UBL5 (also know | 81.23 | |
| cd01807 | 74 | GDX_N ubiquitin-like domain of GDX. GDX contains a | 80.83 | |
| cd01799 | 75 | Hoil1_N Ubiquitin-like domain of HOIL1. HOIL1_N HO | 80.73 | |
| cd01806 | 76 | Nedd8 Nebb8-like ubiquitin protein. Nedd8 (also kn | 80.27 | |
| cd01807 | 74 | GDX_N ubiquitin-like domain of GDX. GDX contains a | 80.17 | |
| cd01796 | 71 | DDI1_N DNA damage inducible protein 1 ubiquitin-li | 80.02 |
| >COG5077 Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-148 Score=1218.35 Aligned_cols=739 Identities=40% Similarity=0.700 Sum_probs=673.4
Q ss_pred cCCCCcEEEEEEcCccccCCCeeecCcEEEcceEEEEEEEECCCCCCcEEEEEEecCCCC---CCCCceEEEEEEEEEEe
Q 003426 48 EDPPTMKFTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSGT---LPYGWSRYAQFSLAVVN 124 (821)
Q Consensus 48 ~~~~~~~~tw~I~n~S~l~~~~~~Sp~f~vgg~~W~I~~yP~G~~~~~lSvyL~~~~~~~---~~~~W~v~a~f~l~L~n 124 (821)
++.....++|+|++||.+. +++.||+|.+||+.|+|.+||+|++...+||||++...+. ....|.|||||+|.|.|
T Consensus 34 Ee~~~~sftW~vk~wsel~-~k~~Sp~F~vg~~twki~lfPqG~nq~~~sVyLe~~pqe~e~~~gk~~~ccaqFaf~Is~ 112 (1089)
T COG5077 34 EELLEMSFTWKVKRWSELA-KKVESPPFSVGGHTWKIILFPQGNNQCNVSVYLEYEPQELEETGGKYYDCCAQFAFDISN 112 (1089)
T ss_pred HHHhhcccceecCChhhhh-hhccCCcccccCeeEEEEEecccCCccccEEEEEeccchhhhhcCcchhhhhheeeecCC
Confidence 4455678999999999998 6899999999999999999999998766999999986531 12359999999999999
Q ss_pred cCCCceeeeeccceeecCCCCCceeccccCCCcccCCCCC---ccccccceeeeeeeeeec------cccccccCCCCcc
Q 003426 125 QIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRG---YLVNDSVVVEAEVAVRKV------LDYWSYDSKKETG 195 (821)
Q Consensus 125 ~~~~~~~~~~~~~~~F~~~~~dwG~~~Fi~~~~L~~~~~g---fl~dD~l~I~~~V~v~~~------~~~~~~~sk~~~g 195 (821)
+..|+....++++|+|+...+||||++|+.+..|..|+.| |+.++++.|+|+|+|+++ |++.+|+||+.||
T Consensus 113 p~~pti~~iN~sHhrFs~~~tDwGFt~f~dL~kl~~psp~~Ppfleeg~l~ItvyVRvlkdPTGVLWHsF~nYnSKkeTG 192 (1089)
T COG5077 113 PKYPTIEYINKSHHRFSMESTDWGFTNFIDLNKLIEPSPGRPPFLEEGTLVITVYVRVLKDPTGVLWHSFLNYNSKKETG 192 (1089)
T ss_pred CCCCchhhhhcccccccccccccchhhhhhhhhhcCCCCCCCCcccCCeEEEEEEEEEEeCCccceeeccccccccccee
Confidence 9999888889999999999999999999999999887654 899999999999999984 4566999999999
Q ss_pred cccccCCCcccchhhHHHHhhccHhHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhcCCCcccchhHHHhhCCCCCCcc
Q 003426 196 YVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSF 275 (821)
Q Consensus 196 ~~GL~N~GnTCYlNS~LQ~L~~~p~fr~~l~~~~~~~~~~~~~~~~~~Lq~Lf~~l~~s~~~v~~~~l~~~~~~~~~~~~ 275 (821)
||||+|+|+||||||+||+||.+..||+.+|.+|+ +++.+.+++++||||+|++||.+..+++|++|+++|||.+.+.+
T Consensus 193 YVGlrNqGATCYmNSLlQslffi~~FRk~Vy~ipT-d~p~grdSValaLQr~Fynlq~~~~PvdTteltrsfgWds~dsf 271 (1089)
T COG5077 193 YVGLRNQGATCYMNSLLQSLFFIAKFRKDVYGIPT-DHPRGRDSVALALQRLFYNLQTGEEPVDTTELTRSFGWDSDDSF 271 (1089)
T ss_pred eeeeccCCceeeHHHHHHHHHHHHHHHHHhhcCCC-CCCCccchHHHHHHHHHHHHhccCCCcchHHhhhhcCcccchHH
Confidence 99999999999999999999999999999999999 66677789999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHHHHHHhcCCcccccccccceeEEeeEEEEeccCceeeeeeeeeeEEEeeCCCCCHHHHHHHhhhhe
Q 003426 276 MQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVE 355 (821)
Q Consensus 276 ~Q~Da~Ef~~~Lld~Le~~~~~~~~~~~i~~lF~g~~~~~i~C~~c~~~s~~~e~f~~l~l~v~~~~~l~esL~~~~~~E 355 (821)
+|||+|||.++|+|+||..|+++..++.++.+|.|+|.++++|.++.++|.|.|.||+|+|++++.++|++||++|++.|
T Consensus 272 ~QHDiqEfnrVl~DnLEksmrgt~VEnaln~ifVgkmksyikCvnvnyEsarvedfwdiqlNvK~~knLqeSfr~yIqvE 351 (1089)
T COG5077 272 MQHDIQEFNRVLQDNLEKSMRGTVVENALNGIFVGKMKSYIKCVNVNYESARVEDFWDIQLNVKGMKNLQESFRRYIQVE 351 (1089)
T ss_pred HHHhHHHHHHHHHHHHHHhhcCChhhhHHhHHHHHHhhceeeEEEechhhhhHHHHHHHHhcccchhhHHHHHHHhhhhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccCCeeeeeeeEEEecCCCeeEEEEEEEEEcccccceeccCceEeCCccccCCccCCCCCCCCcCCCCC-
Q 003426 356 RLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRSVR- 434 (821)
Q Consensus 356 ~l~g~n~y~c~~c~~~~a~k~~~~~~lP~vL~i~L~Rf~~d~~~~~~~Ki~~~v~fP~~Ldl~~~~~~~l~~~~~~~~~- 434 (821)
+|+|+|+|.|+++|.|+|.|++.|.+|||||++|||||+||++++.++||||+++||.+||| .+|+++++++++.
T Consensus 352 ~l~GdN~Y~ae~~GlqdAkKGViFeSlPpVlhlqLKRFeyDfe~d~mvKINDryEFP~eiDl----~pfld~da~ksen~ 427 (1089)
T COG5077 352 TLDGDNRYNAEKHGLQDAKKGVIFESLPPVLHLQLKRFEYDFERDMMVKINDRYEFPLEIDL----LPFLDRDADKSENS 427 (1089)
T ss_pred eccCCcccccccccchhhccceeeccCchHHHHHHHHhccccccCceeeecccccCcchhcc----ccccCchhhhhccc
Confidence 99999999999999999999999999999999999999999999999999999999999999 9999999887766
Q ss_pred -ccEEEeEEEEEeecCCCccEEEEEEeCCCCCEEEeeCCceeEcchHhHHHhhcCCCCCCCCCCCCCCCCCcccccCccE
Q 003426 435 -NLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNA 513 (821)
Q Consensus 435 -~~Y~L~gVIvH~G~~~~GHY~ayir~~~~~~W~~fnD~~V~~v~~~~v~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~A 513 (821)
+.|.|+||+||+|+.+.|||||++|+..+|+||+|||++|++++.++|+++||||+.... .++. ......|..+|
T Consensus 428 d~vY~LygVlVHsGDl~~GHyYallKpe~dg~WykfdDtrVtrat~kevleeNfGgd~~~~--~k~r--~~~~~kRfmsA 503 (1089)
T COG5077 428 DAVYVLYGVLVHSGDLHEGHYYALLKPEKDGRWYKFDDTRVTRATEKEVLEENFGGDHPYK--DKIR--DHSGIKRFMSA 503 (1089)
T ss_pred CcEEEEEEEEEeccccCCceEEEEeccccCCCceeecceehhhHHHHHHHHHhcCCCCCCc--cccc--CCchhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999999986421 1111 11346778899
Q ss_pred EEEEEEeecccccccccCCccchhHHHHHHHHHHHHHHHHHHHHHHhhccceeeEEecChhhHhhhcccccccccCCCc-
Q 003426 514 YMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLAEQIGRDIYFDLVDHDK- 592 (821)
Q Consensus 514 YmL~Y~R~~~~~~~~~~~~~~~ip~~l~~~~~~e~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 592 (821)
|||+|.|++..++++.|+...+||+|+++++.+|..+.|.+.+|+.|+|+|..++++|.+.|.+|.| ||..|+..
T Consensus 504 YmLvYlRks~~ddLlnPV~a~diP~hv~e~l~eei~~~e~r~kei~e~hlYr~vrl~tid~f~~yhg----FDy~Dfs~~ 579 (1089)
T COG5077 504 YMLVYLRKSMLDDLLNPVAAVDIPPHVEEVLSEEIDKTEVRCKEIDEIHLYRGVRLYTIDSFIHYHG----FDYPDFSSE 579 (1089)
T ss_pred heeeeehHhHHHhhhCchhhhhCCHHHHHhhCHHHHHHHHHHHHHHHhhhheeeEEeecchhhhccC----cCchhhhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 88887763
Q ss_pred -----ceEEEeeccccHHHHHHHHHHHhCCCCCc-eEEEEEeecCCCCCCCCCCCCCcchhchHHHHHhhhcccccccee
Q 003426 593 -----VRSFRVQKQTSFMAFKEEIAKEFGIPIQL-QRFWIWAKRQNHTYRPNRPLLPQEEAQTVGQLREVSNKTHTAELR 666 (821)
Q Consensus 593 -----~~~~~v~k~~~~~~~~~~v~~~~~~~~~~-~r~w~~~~~~n~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (821)
...+++++.+++.+|...||+.+++|-+. +|+|.|.+|+|+|.|.++|+. ....++.++.....+. ...++
T Consensus 580 ~~d~~l~qf~iKr~akisdl~~~iae~ln~pqs~~~r~w~m~krhn~tvrvd~P~n--~vnit~~e~~~m~tr~-ge~l~ 656 (1089)
T COG5077 580 LNDSGLAQFVIKRGAKISDLRNNIAEHLNTPQSLYLREWTMIKRHNKTVRVDRPCN--RVNITTRELVGMNTRT-GEELR 656 (1089)
T ss_pred cccccceeEEeecCCCHHHHHHHHHHHcCCCceeeeEEEEEEeccccceeecCcch--hhhhHHHHHhhccchh-HHHHH
Confidence 67899999999999999999999999998 999999999999999999985 4556777776644332 23577
Q ss_pred EEEEeecC-CCCCC-CCCCCCCCCcEEEEEEeecCCCCeEEEeEEEEEecCCChHHHHHHHHHHcCCCCCCcEEEEEeec
Q 003426 667 LFLEVEFG-PDLHP-IAPPDKSKDDILLFFKLYDPEKGELRYVGRLFLKSSSKPIEILRKLNQMAGFDPDEEIELYEEIK 744 (821)
Q Consensus 667 ~~~e~~~~-~~~~~-~~~~~~~~~~~l~flK~fd~~~~~l~~~g~~~~~~~~~v~~l~~~i~~~~g~p~~t~l~lyEEik 744 (821)
+|||.... .++.. ..........++||+||||+.+|.+.|+|++.|.+.++|+++.|.|++ .||.++||.+||||
T Consensus 657 ~yle~~iEhnqL~s~~~~~lt~d~~~~ifvkyfd~~tq~i~gfg~lhvnk~~~issisp~ied--~~ssn~plt~yeei- 733 (1089)
T COG5077 657 SYLERIIEHNQLDSQRKVALTKDGVINIFVKYFDYTTQPISGFGGLHVNKFLKISSISPWIED--SISSNLPLTLYEEI- 733 (1089)
T ss_pred HHHHhhhhhhhhhhhhheeecCCcceEEEEEeeccccccccCccchhhhhhcccccccHHHhh--cccCCCCcchhhhh-
Confidence 88887654 22211 111223445699999999999999999999999999999999999999 89999999999999
Q ss_pred cCccccccccCccCcccccccCCCCEEEEEeCCCCCCccCCCCCCHHHHHHHhhcceEEEEEeC
Q 003426 745 FEPCVMCEHLDKRTSFRLSQIEDGDIICFQKSPPLESEQECRYPDVPSFLEYVHNRQVQNMWKF 808 (821)
Q Consensus 745 ~~p~~i~e~i~~~~t~~~~el~~GDIi~fQ~~~~~~~~~~~~~~~v~~y~~~l~~r~~~~~~~~ 808 (821)
+|+|+ ..|.++.||.++||+.||||||+.+...+......|.++..+|+||++||.|.|.++
T Consensus 734 -kpgmv-d~i~~n~t~~~sei~tgDIi~Fe~p~a~e~Dts~~ydsa~klydfl~~rVlv~frrf 795 (1089)
T COG5077 734 -KPGMV-DTIGDNITFIGSEIGTGDIICFEVPGAVEFDTSSAYDSALKLYDFLQGRVLVAFRRF 795 (1089)
T ss_pred -ccCcc-ccccCCcceeecccCcCcEEEEeccCcccccccccchhhhHHHHhhcCcEEEEEEee
Confidence 79999 999999999999999999999997665544455679999999999999999999976
|
|
| >KOG1863 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02659 peptidase_C19C A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02668 Peptidase_C19L A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG4598 consensus Putative ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02664 Peptidase_C19H A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02663 Peptidase_C19G A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02671 Peptidase_C19O A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG1865 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02657 Peptidase_C19A A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02660 Peptidase_C19D A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02667 Peptidase_C19K A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG1866 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02661 Peptidase_C19E A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02658 Peptidase_C19B A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02669 Peptidase_C19M A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02662 Peptidase_C19F A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02666 Peptidase_C19J A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >cd02665 Peptidase_C19I A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >COG5533 UBP5 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02674 Peptidase_C19R A subfamily of peptidase C19 | Back alignment and domain information |
|---|
| >COG5560 UBP12 Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF12436 USP7_ICP0_bdg: ICP0-binding domain of Ubiquitin-specific protease 7; InterPro: IPR024729 This domain is found in eukaryotes, and is approximately 40 amino acids in length | Back alignment and domain information |
|---|
| >PF00443 UCH: Ubiquitin carboxyl-terminal hydrolase; InterPro: IPR001394 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd02673 Peptidase_C19Q A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG0944 consensus Ubiquitin-specific protease UBP14 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1868 consensus Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02257 Peptidase_C19 Peptidase C19 contains ubiquitinyl hydrolases | Back alignment and domain information |
|---|
| >KOG1867 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd02672 Peptidase_C19P A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >COG5207 UBP14 Isopeptidase T [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1873 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF13423 UCH_1: Ubiquitin carboxyl-terminal hydrolase | Back alignment and domain information |
|---|
| >cd02670 Peptidase_C19N A subfamily of Peptidase C19 | Back alignment and domain information |
|---|
| >KOG1864 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1870 consensus Ubiquitin C-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1872 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1871 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd03772 MATH_HAUSP Herpesvirus-associated ubiquitin-specific protease (HAUSP, also known as USP7) family, N-terminal MATH (TRAF-like) domain; composed of proteins similar to human HAUSP, an enzyme that specifically catalyzes the deubiquitylation of p53 and MDM2, hence playing an important role in the p53-MDM2 pathway | Back alignment and domain information |
|---|
| >cd03775 MATH_Ubp21p Ubiquitin-specific protease 21 (Ubp21p) family, MATH domain; composed of fungal proteins with similarity to Ubp21p of fission yeast | Back alignment and domain information |
|---|
| >KOG2026 consensus Spindle pole body protein - Sad1p [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd03774 MATH_SPOP Speckle-type POZ protein (SPOP) family, MATH domain; composed of proteins with similarity to human SPOP | Back alignment and domain information |
|---|
| >cd03773 MATH_TRIM37 Tripartite motif containing protein 37 (TRIM37) family, MATH domain; TRIM37 is a peroxisomal protein and is a member of the tripartite motif (TRIM) protein subfamily, also known as the RING-B-box-coiled-coil (RBCC) subfamily of zinc-finger proteins | Back alignment and domain information |
|---|
| >cd00270 MATH_TRAF_C Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link cell surface TNFRs and receptors of the interleukin-1/Toll-like family to downstream kinase signaling cascades which results in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses in the immune and inflammatory systems | Back alignment and domain information |
|---|
| >cd03776 MATH_TRAF6 Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF6 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF6, including the Drosophila protein DTRAF2 | Back alignment and domain information |
|---|
| >cd03780 MATH_TRAF5 Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF5 subfamily, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link TNFRs and downstream kinase cascades resulting in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses | Back alignment and domain information |
|---|
| >cd00121 MATH MATH (meprin and TRAF-C homology) domain; an independent folding unit with an eight-stranded beta-sandwich structure found in meprins, TRAFs and other proteins | Back alignment and domain information |
|---|
| >cd03779 MATH_TRAF1 Tumor Necrosis Factor Receptor (TNFR) Associated Factor (TRAF) family, TRAF1 subfamily, TRAF domain, C-terminal MATH subdomain; TRAF molecules serve as adapter proteins that link TNFRs and downstream kinase cascades resulting in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses | Back alignment and domain information |
|---|
| >cd03777 MATH_TRAF3 Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF3 subfamily, TRAF domain; TRAF molecules serve as adapter proteins that link TNFRs and downstream kinase cascades resulting in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses | Back alignment and domain information |
|---|
| >cd03781 MATH_TRAF4 Tumor Necrosis Factor Receptor (TNFR)-Associated Factor (TRAF) family, TRAF4 subfamily, TRAF domain, C-terminal MATH subdomain; composed of proteins with similarity to human TRAF4, including the Drosophila protein DTRAF1 | Back alignment and domain information |
|---|
| >cd03771 MATH_Meprin Meprin family, MATH domain; Meprins are multidomain, highly glycosylated extracellular metalloproteases, which are either anchored to the membrane or secreted into extracellular spaces | Back alignment and domain information |
|---|
| >PF00917 MATH: MATH domain; InterPro: IPR002083 Although apparently functionally unrelated, intracellular TRAFs and extracellular meprins share a conserved region of about 180 residues, the meprin and TRAF homology (MATH) domain [] | Back alignment and domain information |
|---|
| >KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >cd03778 MATH_TRAF2 Tumor Necrosis Factor Receptor (TNFR) Associated Factor (TRAF) family, TRAF2 subfamily, TRAF domain; TRAF molecules serve as adapter proteins that link TNFRs and downstream kinase cascades resulting in the activation of transcription factors and the regulation of cell survival, proliferation and stress responses | Back alignment and domain information |
|---|
| >smart00061 MATH meprin and TRAF homology | Back alignment and domain information |
|---|
| >cd03783 MATH_Meprin_Alpha Meprin family, Alpha subunit, MATH domain; Meprins are multidomain extracellular metalloproteases capable of cleaving growth factors, cytokines, extracellular matrix proteins, and biologically active peptides | Back alignment and domain information |
|---|
| >cd03782 MATH_Meprin_Beta Meprin family, Beta subunit, MATH domain; Meprins are multidomain extracellular metalloproteases capable of cleaving growth factors, cytokines, extracellular matrix proteins, and biologically active peptides | Back alignment and domain information |
|---|
| >PF15499 Peptidase_C98: Ubiquitin-specific peptidase-like, SUMO isopeptidase | Back alignment and domain information |
|---|
| >KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
| >KOG1864 consensus Ubiquitin-specific protease [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1887 consensus Ubiquitin carboxyl-terminal hydrolase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF11976 Rad60-SLD: Ubiquitin-2 like Rad60 SUMO-like; InterPro: IPR022617 This entry includes small ubiquitin-related modifier (SUMO) proteins | Back alignment and domain information |
|---|
| >PF08715 Viral_protease: Papain like viral protease; InterPro: IPR014827 This family of viral proteases are similar to the papain protease and are required for proteolytic processing of the replicase polyprotein | Back alignment and domain information |
|---|
| >PF14533 USP7_C2: Ubiquitin-specific protease C-terminal; PDB: 2YLM_A | Back alignment and domain information |
|---|
| >PF11543 UN_NPL4: Nuclear pore localisation protein NPL4; InterPro: IPR024682 Npl4, along with Ufd1, forms the heterodimer adaptor complex UN, which is involved in the recruitment of p97, an AAA ATPase, for tasks involving the ubiquitin pathway | Back alignment and domain information |
|---|
| >PF05408 Peptidase_C28: Foot-and-mouth virus L-proteinase; InterPro: IPR008739 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
| >cd01763 Sumo Small ubiquitin-related modifier (SUMO) | Back alignment and domain information |
|---|
| >KOG3556 consensus Familial cylindromatosis protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF08817 YukD: WXG100 protein secretion system (Wss), protein YukD; InterPro: IPR014921 YukD is a bacterial protein that adopts a ubiquitin-like fold [] | Back alignment and domain information |
|---|
| >KOG0297 consensus TNF receptor-associated factor [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis | Back alignment and domain information |
|---|
| >PF14560 Ubiquitin_2: Ubiquitin-like domain; PDB: 1WJN_A 2KJ6_A 2KJR_A 1V6E_A 1T0Y_A | Back alignment and domain information |
|---|
| >PF00240 ubiquitin: Ubiquitin family; InterPro: IPR000626 Ubiquitinylation is an ATP-dependent process that involves the action of at least three enzymes: a ubiquitin-activating enzyme (E1, IPR000011 from INTERPRO), a ubiquitin-conjugating enzyme (E2, IPR000608 from INTERPRO), and a ubiquitin ligase (E3, IPR000569 from INTERPRO, IPR003613 from INTERPRO), which work sequentially in a cascade | Back alignment and domain information |
|---|
| >cd01805 RAD23_N Ubiquitin-like domain of RAD23 | Back alignment and domain information |
|---|
| >cd01796 DDI1_N DNA damage inducible protein 1 ubiquitin-like domain | Back alignment and domain information |
|---|
| >cd01809 Scythe_N Ubiquitin-like domain of Scythe protein | Back alignment and domain information |
|---|
| >cd01793 Fubi Fubi ubiquitin-like protein | Back alignment and domain information |
|---|
| >PTZ00044 ubiquitin; Provisional | Back alignment and domain information |
|---|
| >cd01812 BAG1_N Ubiquitin-like domain of BAG1 | Back alignment and domain information |
|---|
| >cd01794 DC_UbP_C dendritic cell derived ubiquitin-like protein | Back alignment and domain information |
|---|
| >PF12436 USP7_ICP0_bdg: ICP0-binding domain of Ubiquitin-specific protease 7; InterPro: IPR024729 This domain is found in eukaryotes, and is approximately 40 amino acids in length | Back alignment and domain information |
|---|
| >cd01791 Ubl5 UBL5 ubiquitin-like modifier | Back alignment and domain information |
|---|
| >cd01807 GDX_N ubiquitin-like domain of GDX | Back alignment and domain information |
|---|
| >cd01799 Hoil1_N Ubiquitin-like domain of HOIL1 | Back alignment and domain information |
|---|
| >cd01806 Nedd8 Nebb8-like ubiquitin protein | Back alignment and domain information |
|---|
| >cd01807 GDX_N ubiquitin-like domain of GDX | Back alignment and domain information |
|---|
| >cd01796 DDI1_N DNA damage inducible protein 1 ubiquitin-like domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 821 | ||||
| 2f1z_A | 522 | Crystal Structure Of Hausp Length = 522 | 1e-105 | ||
| 1nbf_A | 353 | Crystal Structure Of A Ubp-Family Deubiquitinating | 4e-91 | ||
| 1nb8_A | 353 | Structure Of The Catalytic Domain Of Usp7 (Hausp) L | 1e-87 | ||
| 3m99_A | 471 | Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Mod | 2e-19 | ||
| 3mhh_A | 476 | Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE | 3e-19 | ||
| 4fip_A | 476 | Structure Of The Saga Ubp8(S144n)SGF11(1-72, Delta- | 6e-19 | ||
| 2ylm_A | 530 | Mechanism Of Usp7 (Hausp) Activation By Its C-Termi | 2e-13 | ||
| 3n3k_A | 396 | The Catalytic Domain Of Usp8 In Complex With A Usp8 | 7e-12 | ||
| 2gfo_A | 396 | Structure Of The Catalytic Domain Of Human Ubiquiti | 5e-11 | ||
| 3v6c_A | 367 | Crystal Structure Of Usp2 In Complex With Mutated U | 3e-10 | ||
| 2hd5_A | 359 | Usp2 In Complex With Ubiquitin Length = 359 | 6e-10 | ||
| 2ibi_A | 374 | Covalent Ubiquitin-Usp2 Complex Length = 374 | 2e-09 | ||
| 3nhe_A | 348 | High Resolution Structure (1.26a) Of Usp2a In Compl | 2e-08 | ||
| 2f1y_A | 159 | Crystal Structure Of The Traf-Like Domain Of HauspU | 1e-07 | ||
| 1yy6_A | 155 | The Crystal Strucure Of The N-Terminal Domain Of Ha | 1e-07 | ||
| 2f1w_A | 158 | Crystal Structure Of The Traf-Like Domain Of HauspU | 1e-07 | ||
| 2f1x_A | 161 | Crystal Structure Of The Traf-Like Domain Of HauspU | 1e-07 | ||
| 2xxn_A | 143 | Structure Of The Virf4-Hausp Traf Domain Complex Le | 1e-07 | ||
| 3mtn_A | 373 | Usp21 In Complex With A Ubiquitin-based, Usp21-spec | 1e-06 | ||
| 3i3t_A | 355 | Crystal Structure Of Covalent Ubiquitin-usp21 Compl | 2e-06 | ||
| 2y5b_A | 370 | Structure Of Usp21 In Complex With Linear Diubiquit | 2e-06 | ||
| 2kvr_A | 130 | Solution Nmr Structure Of Human Ubiquitin Specific | 5e-05 |
| >pdb|2F1Z|A Chain A, Crystal Structure Of Hausp Length = 522 | Back alignment and structure |
|
| >pdb|1NBF|A Chain A, Crystal Structure Of A Ubp-Family Deubiquitinating Enzyme In Isolation And In Complex With Ubiquitin Aldehyde Length = 353 | Back alignment and structure |
| >pdb|1NB8|A Chain A, Structure Of The Catalytic Domain Of Usp7 (Hausp) Length = 353 | Back alignment and structure |
| >pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module Length = 471 | Back alignment and structure |
| >pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE Length = 476 | Back alignment and structure |
| >pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72, Delta-Znf)SUS1SGF73 Dub Module Length = 476 | Back alignment and structure |
| >pdb|2YLM|A Chain A, Mechanism Of Usp7 (Hausp) Activation By Its C-Terminal Ubiquitin-Like Domain (Hubl) And Allosteric Regulation By Gmp-Synthetase Length = 530 | Back alignment and structure |
| >pdb|3N3K|A Chain A, The Catalytic Domain Of Usp8 In Complex With A Usp8 Specific Inhibitor Length = 396 | Back alignment and structure |
| >pdb|2GFO|A Chain A, Structure Of The Catalytic Domain Of Human Ubiquitin Carboxyl-terminal Hydrolase 8 Length = 396 | Back alignment and structure |
| >pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated Ubiquitin Length = 367 | Back alignment and structure |
| >pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin Length = 359 | Back alignment and structure |
| >pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex Length = 374 | Back alignment and structure |
| >pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With Ubiquitin Length = 348 | Back alignment and structure |
| >pdb|2F1Y|A Chain A, Crystal Structure Of The Traf-Like Domain Of HauspUSP7 Bound To A Mdm2 Peptide Length = 159 | Back alignment and structure |
| >pdb|1YY6|A Chain A, The Crystal Strucure Of The N-Terminal Domain Of HauspUSP7 Complexed With An Ebna1 Peptide Length = 155 | Back alignment and structure |
| >pdb|2F1W|A Chain A, Crystal Structure Of The Traf-Like Domain Of HauspUSP7 Length = 158 | Back alignment and structure |
| >pdb|2F1X|A Chain A, Crystal Structure Of The Traf-Like Domain Of HauspUSP7 Bound To A P53 Peptide Length = 161 | Back alignment and structure |
| >pdb|2XXN|A Chain A, Structure Of The Virf4-Hausp Traf Domain Complex Length = 143 | Back alignment and structure |
| >pdb|3MTN|A Chain A, Usp21 In Complex With A Ubiquitin-based, Usp21-specific Inhibitor Length = 373 | Back alignment and structure |
| >pdb|3I3T|A Chain A, Crystal Structure Of Covalent Ubiquitin-usp21 Complex Length = 355 | Back alignment and structure |
| >pdb|2Y5B|A Chain A, Structure Of Usp21 In Complex With Linear Diubiquitin-Aldehyde Length = 370 | Back alignment and structure |
| >pdb|2KVR|A Chain A, Solution Nmr Structure Of Human Ubiquitin Specific Protease Usp7 Ubl Domain (Residues 537-664). Nesg Target Hr4395c SGC-Toronto Length = 130 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens} Length = 522 | Back alignment and structure |
|---|
Score = 603 bits (1555), Expect = 0.0
Identities = 237/538 (44%), Positives = 328/538 (60%), Gaps = 27/538 (5%)
Query: 26 GPQPMEVVSQVEPASTVENQQVEDPPTM---KFTWTIENFSRLNTKKHYSDVFVVGGYKW 82
G V+ + +T E +D F +T+E FSRL+ + S V W
Sbjct: 1 GSHMNGNVALSDGHNTAEEDMEDDTSWRSEATFQFTVERFSRLS-ESVLSPPCFVRNLPW 59
Query: 83 RILIFPK----GNNVDHLSMYLDVADSGTLPYGWSRYAQFSLAVVNQIHSKYSIRKDTQH 138
+I++ P+ + + +L ++ + WS +AQ L ++N + S + H
Sbjct: 60 KIMVMPRFYPDRPHQKSVGFFLQ-CNAESDSTSWSCHAQAVLKIINYRDDEKSFSRRISH 118
Query: 139 QFNARESDWGFTSFMPLGDLYDPSRGYLVNDSVVVEAEVAVRKVLDYWSYDSKKETGYVG 198
F +E+DWGF++FM ++ DP +G++ +D V E V ++DSKK TGYVG
Sbjct: 119 LFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADAP-HGVAWDSKKHTGYVG 177
Query: 199 LKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYNDTSV 258
LKNQGATCYMNSLLQTL+ RKAVY MPT +D S S+PLALQ +FY+LQ++D V
Sbjct: 178 LKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDD-SSKSVPLALQRVFYELQHSDKPV 236
Query: 259 ATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIEC 318
TK+LTKSFGW+T DSFMQHDVQEL RVL + +E+KMKGT VEGTI +LF G ++YI+C
Sbjct: 237 GTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQC 296
Query: 319 INVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVL 378
VDY+S R+E +YD+QL +KG ++++ SF YV VE+L+GDNKY A EHGLQ+A+KGV
Sbjct: 297 KEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGLQEAEKGVK 356
Query: 379 FIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYT 438
F+ PPVL LQL RF YD D +KINDR+EFP QL LD ++L D Y
Sbjct: 357 FLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLD----EFLQ-KTDPKDPANYI 411
Query: 439 LHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNP 498
LH+VLVHSG HGGHY ++ P +W KFDD+ V++ + A+E YGG ++
Sbjct: 412 LHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDD------ 465
Query: 499 GFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEEKEDKRR 556
+NAYMLVYIRES +++ V + DI + L RL++E+ + KR+
Sbjct: 466 -----DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRK 518
|
| >1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A Length = 353 | Back alignment and structure |
|---|
| >3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 3m99_A Length = 476 | Back alignment and structure |
|---|
| >2ylm_A Ubiquitin carboxyl-terminal hydrolase 7; UBL; 2.70A {Homo sapiens} Length = 530 | Back alignment and structure |
|---|
| >3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} PDB: 2hd5_A 2ibi_A Length = 348 | Back alignment and structure |
|---|
| >2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A Length = 404 | Back alignment and structure |
|---|
| >1vjv_A Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE; 1.74A {Saccharomyces cerevisiae} SCOP: d.3.1.9 Length = 415 | Back alignment and structure |
|---|
| >2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A Length = 155 | Back alignment and structure |
|---|
| >2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A Length = 396 | Back alignment and structure |
|---|
| >3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} PDB: 2y5b_A 3mtn_A Length = 355 | Back alignment and structure |
|---|
| >2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
| >2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens} Length = 130 | Back alignment and structure |
|---|
| >3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A Length = 145 | Back alignment and structure |
|---|
| >1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A Length = 160 | Back alignment and structure |
|---|
| >1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A Length = 168 | Back alignment and structure |
|---|
| >1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A Length = 192 | Back alignment and structure |
|---|
| >2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A Length = 192 | Back alignment and structure |
|---|
| >3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens} Length = 854 | Back alignment and structure |
|---|
| >3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens} Length = 854 | Back alignment and structure |
|---|
| >1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A Length = 228 | Back alignment and structure |
|---|
| >3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling, linkage specificity, deubiquitinating enzyme, Lys63- linked, anti-oncogene; 2.8A {Homo sapiens} Length = 374 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 821 | |||
| 2f1z_A | 522 | Ubiquitin carboxyl-terminal hydrolase 7; hausp, US | 100.0 | |
| 1nb8_A | 353 | Ubiquitin carboxyl-terminal hydrolase 7; UBP, deub | 100.0 | |
| 2y6e_A | 367 | Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; | 100.0 | |
| 3nhe_A | 348 | Ubiquitin carboxyl-terminal hydrolase 2; cysteine | 100.0 | |
| 2gfo_A | 396 | Ubiquitin carboxyl-terminal hydrolase 8; protease, | 100.0 | |
| 3i3t_A | 355 | Ubiquitin carboxyl-terminal hydrolase 21; hydrolas | 100.0 | |
| 2ayn_A | 404 | Ubiquitin carboxyl-terminal hydrolase 14; deubiqui | 100.0 | |
| 1vjv_A | 415 | Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, | 100.0 | |
| 3mhs_A | 476 | Ubiquitin carboxyl-terminal hydrolase 8; multi-pro | 100.0 | |
| 3ihp_A | 854 | Ubiquitin carboxyl-terminal hydrolase 5; hydrolase | 100.0 | |
| 2ylm_A | 530 | Ubiquitin carboxyl-terminal hydrolase 7; UBL; 2.70 | 100.0 | |
| 2foj_A | 155 | Ubiquitin carboxyl-terminal hydrolase 7; MATH doma | 99.93 | |
| 2vhf_A | 374 | Ubiquitin carboxyl-terminal hydrolase CYLD; cytoki | 99.93 | |
| 3ivv_A | 145 | Speckle-type POZ protein; protein binding, nucleus | 99.91 | |
| 2kvr_A | 130 | Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubi | 99.9 | |
| 4gjh_A | 178 | TNF receptor-associated factor 5; TRAF domain, imm | 99.88 | |
| 4ghu_A | 198 | TNF receptor-associated factor 3; alpha/beta, inna | 99.86 | |
| 1ca9_A | 192 | TRAF2, protein (TNF receptor associated factor 2); | 99.85 | |
| 1d00_A | 168 | Tumor necrosis factor receptor associated protein | 99.85 | |
| 1lb6_A | 160 | TNF receptor-associated factor 6; TRAF6-CD40 compl | 99.84 | |
| 2gkw_A | 192 | TNF receptor-associated factor 3; CD40, NF-KB sign | 99.82 | |
| 3hqi_A | 312 | Speckle-type POZ protein; SPOP, ubiquitin, puckere | 99.82 | |
| 1flk_A | 228 | TNF receptor associated factor 3; TNF signaling, T | 99.81 | |
| 4gwm_A | 592 | Meprin A subunit beta; mulidomain structure, hydro | 98.88 | |
| 3mp2_A | 211 | Non-structural protein 3; papain-like protease, TG | 96.61 | |
| 3u30_A | 172 | Ubiquitin, linear DI-ubiquitin; immune system; 2.4 | 96.37 | |
| 3b08_A | 152 | Polyubiquitin-C, ubiquitin; protein complex, signa | 96.35 | |
| 3rt3_B | 159 | Ubiquitin-like protein ISG15; ubiquitin-like domai | 96.35 | |
| 2ylm_A | 530 | Ubiquitin carboxyl-terminal hydrolase 7; UBL; 2.70 | 96.26 | |
| 2fe8_A | 315 | PP1AB, ORF1AB, replicase polyprotein 1AB; protease | 94.84 | |
| 2io1_B | 94 | Small ubiquitin-related modifier 3 precursor; SUMO | 92.19 | |
| 3goe_A | 82 | DNA repair protein RAD60; SUMO-like domain, sumoyl | 91.3 | |
| 2io0_B | 91 | Small ubiquitin-related modifier 2 precursor; SUMO | 90.21 | |
| 3kyd_D | 115 | Small ubiquitin-related modifier 1; SUMO, thioeste | 90.19 | |
| 1wm3_A | 72 | Ubiquitin-like protein SMT3B; ubiquitin fold, half | 89.76 | |
| 2k8h_A | 110 | Small ubiquitin protein; SUMO, post-translational | 89.65 | |
| 2kj6_A | 97 | Tubulin folding cofactor B; methods development, N | 89.16 | |
| 2d07_B | 93 | Ubiquitin-like protein SMT3B; hydrolase; 2.10A {Ho | 89.07 | |
| 3plu_A | 93 | Ubiquitin-like modifier HUB1; ubiquitin-like, HUB- | 88.98 | |
| 3a4r_A | 79 | Nfatc2-interacting protein; ubiquitin fold, coiled | 88.46 | |
| 3dbh_I | 88 | NEDD8; cell cycle, activating enzyme, apoptosis, m | 88.36 | |
| 2eke_C | 106 | Ubiquitin-like protein SMT3; UBC9, SUMO binding mo | 88.27 | |
| 1wz0_A | 104 | Ubiquitin-like protein SMT3B; SUMO-2, ubiquitin-li | 88.13 | |
| 1wjn_A | 97 | Tubulin-folding protein TBCE; ubiquitin-like domai | 87.98 | |
| 4dbg_A | 105 | Ranbp-type and C3HC4-type zinc finger-containing; | 87.81 | |
| 3v6c_B | 91 | Ubiquitin; structural genomics, structural genomic | 87.8 | |
| 2jxx_A | 97 | Nfatc2-interacting protein; nuclear factor of acti | 87.44 | |
| 2dzi_A | 81 | Ubiquitin-like protein 4A; GDX, structural genomic | 87.1 | |
| 2l76_A | 95 | Nfatc2-interacting protein; ubiquitin-like domain, | 86.97 | |
| 2uyz_B | 79 | Small ubiquitin-related modifier 1; sumoylation, c | 86.68 | |
| 2kjr_A | 95 | CG11242; UBL, ubiquitin, ubiquitin-like, structura | 86.17 | |
| 3plu_A | 93 | Ubiquitin-like modifier HUB1; ubiquitin-like, HUB- | 86.1 | |
| 1wyw_B | 97 | Ubiquitin-like protein SMT3C; hydrolase; 2.10A {Ho | 86.06 | |
| 3n3k_B | 85 | Ubiquitin; hydrolase, protease, thiol protease, DU | 86.03 | |
| 4hcn_B | 98 | Polyubiquitin, ubiquitin; ubiquitin/NEDD8 deamidas | 85.68 | |
| 4b6w_A | 86 | Tubulin-specific chaperone; CAP-Gly, ubiquitin-lik | 85.35 | |
| 3mtn_B | 85 | UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquit | 85.29 | |
| 1wx7_A | 106 | Ubiquilin 3; ubiquitin-like domain, structural gen | 85.23 | |
| 3phx_B | 79 | Ubiquitin-like protein ISG15; OTU domain, DE-ubiqu | 85.01 | |
| 2bwf_A | 77 | Ubiquitin-like protein DSK2; signaling protein, UB | 84.93 | |
| 2kjr_A | 95 | CG11242; UBL, ubiquitin, ubiquitin-like, structura | 84.83 | |
| 4b6w_A | 86 | Tubulin-specific chaperone; CAP-Gly, ubiquitin-lik | 84.59 | |
| 3tix_A | 207 | Ubiquitin-like protein SMT3, RNA-induced transcri | 84.47 | |
| 1wh3_A | 87 | 59 kDa 2'-5'-oligoadenylate synthetase like protei | 83.55 | |
| 1j8c_A | 125 | Ubiquitin-like protein hplic-2; ubiquitin-like dom | 83.53 | |
| 2kj6_A | 97 | Tubulin folding cofactor B; methods development, N | 83.45 | |
| 1v5o_A | 102 | 1700011N24RIK protein; hypothetical protein, ubiqu | 83.15 | |
| 3jyu_A | 231 | Ubiquitin carboxyl-terminal hydrolase; domain in u | 83.05 | |
| 4a3p_A | 217 | Ubiquitin carboxyl-terminal hydrolase 15; 1.40A {H | 82.98 | |
| 4fbj_B | 88 | NEDD8; effector-HOST target complex, glutamine dea | 82.72 | |
| 1uh6_A | 100 | Ubiquitin-like 5; beta-grAsp fold, structural geno | 82.62 | |
| 1wx8_A | 96 | Riken cDNA 4931431F19; ubiquitin-like domain, ubiq | 82.34 | |
| 2hj8_A | 88 | Interferon-induced 17 kDa protein; HR2873B, human | 82.04 | |
| 3n3k_B | 85 | Ubiquitin; hydrolase, protease, thiol protease, DU | 81.77 | |
| 1yqb_A | 100 | Ubiquilin 3; structural genomics consortium, ubiqu | 81.44 | |
| 2klc_A | 101 | Ubiquilin-1; ubiquitin-like, structural genomics, | 80.86 | |
| 3a9j_A | 76 | Ubiquitin; protein complex, cytoplasm, isopeptide | 80.77 | |
| 1v6e_A | 95 | Cytoskeleton-associated protein 1; tubulin-specifi | 80.71 | |
| 3mtn_B | 85 | UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquit | 80.5 | |
| 2l7r_A | 93 | Ubiquitin-like protein FUBI; structural genomics, | 80.15 |
| >2f1z_A Ubiquitin carboxyl-terminal hydrolase 7; hausp, USP7, UBP, deubiquitinating enzyme, substrate recognition; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-96 Score=856.80 Aligned_cols=492 Identities=47% Similarity=0.797 Sum_probs=435.7
Q ss_pred CCCCcEEEEEEcCccccCCCeeecCcEEEcceEEEEEEEECCC----CCCcEEEEEEecCCCCCCCCceEEEEEEEEEEe
Q 003426 49 DPPTMKFTWTIENFSRLNTKKHYSDVFVVGGYKWRILIFPKGN----NVDHLSMYLDVADSGTLPYGWSRYAQFSLAVVN 124 (821)
Q Consensus 49 ~~~~~~~tw~I~n~S~l~~~~~~Sp~f~vgg~~W~I~~yP~G~----~~~~lSvyL~~~~~~~~~~~W~v~a~f~l~L~n 124 (821)
....++|+|+|+|||.++ +.++|++|.+||++|+|++||+|+ +.+|||+||+|.+. ..+.+|+|+|+|.|+|+|
T Consensus 27 ~~~~~~~~w~I~nfS~~~-~~~~S~~F~vgg~~W~i~~yP~G~~~~~~~~~lSlyL~~~~~-~~~~~w~v~a~f~l~l~n 104 (522)
T 2f1z_A 27 WRSEATFQFTVERFSRLS-ESVLSPPCFVRNLPWKIMVMPRFYPDRPHQKSVGFFLQCNAE-SDSTSWSCHAQAVLKIIN 104 (522)
T ss_dssp CCSEEEEEEEESSCTTCC-SCEECCCEEETTEEEEEEECBC--------CBBCEEEEESTT-CCCSSCBEEEEEEEEECC
T ss_pred ccCCcEEEEEECChhhcC-CceeCCCEEECCEeeEEEEEeCCCCCCCCCCeEEEEEEecCC-CCCCCceEEEEEEEEEEc
Confidence 345799999999999998 499999999999999999999995 44799999999877 446789999999999999
Q ss_pred cCCCceeeeeccceeecCCCCCceeccccCCCcccCCCCCccccccceeeeeeeeeeccccccccCCCCcccccccCCCc
Q 003426 125 QIHSKYSIRKDTQHQFNARESDWGFTSFMPLGDLYDPSRGYLVNDSVVVEAEVAVRKVLDYWSYDSKKETGYVGLKNQGA 204 (821)
Q Consensus 125 ~~~~~~~~~~~~~~~F~~~~~dwG~~~Fi~~~~L~~~~~gfl~dD~l~I~~~V~v~~~~~~~~~~sk~~~g~~GL~N~Gn 204 (821)
+.++..+..+...|+|...+.+|||.+||++++|.++++|||.||+++|+|+|+|.. +....|++++.+|++||.|+||
T Consensus 105 ~~~~~~~~~~~~~~~F~~~~~~wG~~~Fi~~~~L~~~~~g~L~nD~l~i~~~V~v~~-p~g~~~~~~~~~g~~GL~NlGn 183 (522)
T 2f1z_A 105 YRDDEKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADA-PHGVAWDSKKHTGYVGLKNQGA 183 (522)
T ss_dssp TTCGGGCEEEECCEEECGGGCEEEESSSSBHHHHSCGGGSSCBTTBEEEEEEEEECC-CBSSCCCTTTTTSCCCBCCC--
T ss_pred CCCCccceeccceeEecCCCCCcchhheeEhhHhcCcccCcccCCcEEEEEEeeccc-cccccCCccccCCccceecCcc
Confidence 998877777788899988888999999999999988889999999999999999965 4456789999999999999999
Q ss_pred ccchhhHHHHhhccHhHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhcCCCcccchhHHHhhCCCCCCccccCcHHHHH
Q 003426 205 TCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELN 284 (821)
Q Consensus 205 TCYlNS~LQ~L~~~p~fr~~l~~~~~~~~~~~~~~~~~~Lq~Lf~~l~~s~~~v~~~~l~~~~~~~~~~~~~Q~Da~Ef~ 284 (821)
||||||+||+|+++|+||++++.++.. ......+++++|++||..|+.+..++.+..|+++|+|..+..++|||||||+
T Consensus 184 TCYmNSvLQ~L~~~~~fr~~~~~~~~~-~~~~~~~~~~~l~~lf~~l~~~~~~~~~~~l~~~~~~~~~~~~~QqDa~Efl 262 (522)
T 2f1z_A 184 TCYMNSLLQTLFFTNQLRKAVYMMPTE-GDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELC 262 (522)
T ss_dssp CTTHHHHHHHHHTCHHHHHHHHTCCCC-SSCTTTCHHHHHHHHHHHHHHCSSCBCCTTHHHHTCCCTTTSSTTSCHHHHH
T ss_pred cHHHHHHHHHHhccHHHHHHHhhcccc-CCcccchHHHHHHHHHHHHhcCCCccCcHHHHhhcCCccCCCcccccHHHHH
Confidence 999999999999999999999987753 3344568999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCcccccccccceeEEeeEEEEeccCceeeeeeeeeeEEEeeCCCCCHHHHHHHhhhhecccCCCccc
Q 003426 285 RVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYH 364 (821)
Q Consensus 285 ~~Lld~Le~~~~~~~~~~~i~~lF~g~~~~~i~C~~c~~~s~~~e~f~~l~l~v~~~~~l~esL~~~~~~E~l~g~n~y~ 364 (821)
+.||+.|+++++++...+.|.++|+|++.+.++|..|++.+.+.|+|++|+|+|++..+|.++|+.|+.+|.++|+|+|.
T Consensus 263 ~~LLd~L~~~l~~~~~~s~i~~lF~G~~~s~i~C~~C~~~s~~~e~f~~LsL~i~~~~~l~~~L~~~~~~E~l~~~n~~~ 342 (522)
T 2f1z_A 263 RVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYD 342 (522)
T ss_dssp HHHHHHHHHHHTTSTTTTHHHHHHCEEEEEEECCSSSCCCCCEEEEESCEEECCTTCCBHHHHHHHHTCEEEECTTSCBC
T ss_pred HHHHHHHHhhccCCccccchhhheeEEEEEEEEcCCCCceeeeeeeeEEEEEEeCCcccchHHHHHhhceeecCCcceee
Confidence 99999999999988888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCeeeeeeeEEEecCCCeeEEEEEEEEEcccccceeccCceEeCCccccCCccCCCCCCCCcCCCCCccEEEeEEEE
Q 003426 365 AEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSVLV 444 (821)
Q Consensus 365 c~~c~~~~a~k~~~~~~lP~vL~i~L~Rf~~d~~~~~~~Ki~~~v~fP~~Ldl~~~~~~~l~~~~~~~~~~~Y~L~gVIv 444 (821)
|+.|+++.|.|+..|.++|+||+|||+||.|+..++...|++++|+||..||| ++|+.... ...+..|+|+|||+
T Consensus 343 C~~c~~~~a~k~~~i~~lP~vL~i~LkRF~~~~~~~~~~Ki~~~v~fp~~Ldl----~~~~~~~~-~~~~~~Y~L~avv~ 417 (522)
T 2f1z_A 343 AGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPL----DEFLQKTD-PKDPANYILHAVLV 417 (522)
T ss_dssp CGGGCSBCEEEEEEESCCCSEEEEEECCEEECSSSSCEEECCCCCBCCSEEEC----GGGBSSCC-TTSCCEEEEEEEEE
T ss_pred cCcCCccceEEEEEeecCCceEEEEEEeEEEcccCCcceEcCcEEeCCCeecc----hhhhcccc-CCCCcEEEEEEEEE
Confidence 99999999999999999999999999999999888889999999999999999 67766432 23467899999999
Q ss_pred EeecCCCccEEEEEEeCCCCCEEEeeCCceeEcchHhHHHhhcCCCCCCCCCCCCCCCCCcccccCccEEEEEEEeeccc
Q 003426 445 HSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDK 524 (821)
Q Consensus 445 H~G~~~~GHY~ayir~~~~~~W~~fnD~~V~~v~~~~v~~~~~Gg~~~~~~~~~~~~~~~~~~~~~~~AYmL~Y~R~~~~ 524 (821)
|.|++++|||+||+|+..+++||+|||+.|++++.++|+..+|||.+... ......+||||||+|.+..
T Consensus 418 H~G~~~~GHY~a~v~~~~~~~W~~fnD~~V~~v~~~~v~~~~~Gg~~~~~-----------~~~~~~~aYiLfY~r~~~~ 486 (522)
T 2f1z_A 418 HSGDNHGGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDDDL-----------SVRHCTNAYMLVYIRESKL 486 (522)
T ss_dssp EECSSSCSEEEEEECTTSSSCCEEEETTEEEECCHHHHSTTSSCCC-------------------CEEEEEEEEEETTSH
T ss_pred ecccCCCceEEEEEecCCCCCEEEEECceeEECCHHHHHHhhcCCCcccc-----------ccCcCCceEEEEEEECCch
Confidence 99999999999999986689999999999999999999999999975311 1122468999999999999
Q ss_pred ccccccCCccchhHHHHHHHHHHHHHHHHHHHHHHh
Q 003426 525 DKIICNVDEKDIAEHLRIRLKKEQEEKEDKRRYKAQ 560 (821)
Q Consensus 525 ~~~~~~~~~~~ip~~l~~~~~~e~~~~~~~~~e~~~ 560 (821)
++++.++.+.+||+++.+++++|+++.++++||++|
T Consensus 487 ~~~~~~~~~~~ip~~~~~~~~~e~~~~~~~~~~~~~ 522 (522)
T 2f1z_A 487 SEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQE 522 (522)
T ss_dssp HHHTCCCCTTTSCSHHHHHHHHTTTCC---------
T ss_pred HHhhcccCccCCCHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999888875
|
| >1nb8_A Ubiquitin carboxyl-terminal hydrolase 7; UBP, deubiquitination, hausp, P53 binding; 2.30A {Homo sapiens} SCOP: d.3.1.9 PDB: 1nbf_A | Back alignment and structure |
|---|
| >2y6e_A Ubiquitin carboxyl-terminal hydrolase 4; HET: CME; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3nhe_A Ubiquitin carboxyl-terminal hydrolase 2; cysteine protease, substrate ENZY complex, hydrolase-protein binding complex; HET: CME; 1.26A {Homo sapiens} SCOP: d.3.1.9 PDB: 2hd5_A 3v6c_A 3v6e_A 2ibi_A | Back alignment and structure |
|---|
| >2gfo_A Ubiquitin carboxyl-terminal hydrolase 8; protease, thiol protease, UBL conjugation pathway deubiquitinating enzyme, DUB, zinc ribbon; 2.00A {Homo sapiens} SCOP: d.3.1.9 PDB: 3n3k_A | Back alignment and structure |
|---|
| >3i3t_A Ubiquitin carboxyl-terminal hydrolase 21; hydrolase, structural genomics consortium, SGC, activator, alternative splicing, chromatin regulator, nucleus, polymorphism, protease; 2.59A {Homo sapiens} SCOP: d.3.1.0 PDB: 2y5b_A 3mtn_A | Back alignment and structure |
|---|
| >2ayn_A Ubiquitin carboxyl-terminal hydrolase 14; deubiquitinating enzymes, DUB, USP14, proteasome, enzyme mechanism; 3.20A {Homo sapiens} SCOP: d.3.1.9 PDB: 2ayo_A | Back alignment and structure |
|---|
| >1vjv_A Ubiquitin carboxyl-terminal hydrolase 6; YFR010W, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE; 1.74A {Saccharomyces cerevisiae} SCOP: d.3.1.9 | Back alignment and structure |
|---|
| >3mhs_A Ubiquitin carboxyl-terminal hydrolase 8; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3mhh_A 4fjc_A 4fk5_A 4fip_A 3m99_A | Back alignment and structure |
|---|
| >3ihp_A Ubiquitin carboxyl-terminal hydrolase 5; hydrolase, protease, thiol protease, UBL conjugation pathway, metal-binding, zinc-finger,structural genomics; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2ylm_A Ubiquitin carboxyl-terminal hydrolase 7; UBL; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2foj_A Ubiquitin carboxyl-terminal hydrolase 7; MATH domain, hydrolase; 1.60A {Homo sapiens} PDB: 1yze_A 1yy6_A 2foo_A 2fop_A 3mqr_A 3mqs_C 2f1w_A 2f1x_A 2f1y_A 2xxn_A | Back alignment and structure |
|---|
| >2vhf_A Ubiquitin carboxyl-terminal hydrolase CYLD; cytokine signalling, linkage specificity, deubiquitinating enzyme, Lys63- linked, anti-oncogene; 2.8A {Homo sapiens} | Back alignment and structure |
|---|
| >3ivv_A Speckle-type POZ protein; protein binding, nucleus, UBL conjugation pathway, ligase; 1.25A {Homo sapiens} SCOP: b.8.1.1 PDB: 3ivq_A 3ivb_A 3hsv_A 3hqh_A 3hqm_A 3hql_A 2cr2_A | Back alignment and structure |
|---|
| >2kvr_A Ubiquitin carboxyl-terminal hydrolase 7; USP7, ubiquitin-like domain, UBL, ubiquitin specific protease, HOST-virus interaction, nucleus, protease; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4gjh_A TNF receptor-associated factor 5; TRAF domain, immune system; 2.81A {Mus musculus} | Back alignment and structure |
|---|
| >4ghu_A TNF receptor-associated factor 3; alpha/beta, innate immunity, IFN pathway, immune system; 2.20A {Mus musculus} PDB: 2gkw_A 1kzz_A 1l0a_A 1zms_A 1rf3_A | Back alignment and structure |
|---|
| >1ca9_A TRAF2, protein (TNF receptor associated factor 2); TNF signaling, TRAF, adapter protein, cell surviVal; 2.30A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1qsc_A 1czz_A | Back alignment and structure |
|---|
| >1d00_A Tumor necrosis factor receptor associated protein 2; B-sandwich, protein-peptide complex, apoptosis; 2.00A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1ca4_A 1d0j_A 1f3v_B 1czy_A 1d01_A 1d0a_A | Back alignment and structure |
|---|
| >1lb6_A TNF receptor-associated factor 6; TRAF6-CD40 complex, signaling protein; 1.80A {Homo sapiens} SCOP: b.8.1.1 PDB: 1lb5_A 1lb4_A | Back alignment and structure |
|---|
| >2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A | Back alignment and structure |
|---|
| >3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A | Back alignment and structure |
|---|
| >1flk_A TNF receptor associated factor 3; TNF signaling, TRAF3, CD40-binding protein, apoptosis; 2.80A {Homo sapiens} SCOP: b.8.1.1 h.1.2.1 PDB: 1fll_A | Back alignment and structure |
|---|
| >4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A* | Back alignment and structure |
|---|
| >3mp2_A Non-structural protein 3; papain-like protease, TGEV, hydrolase; 2.50A {Porcine transmissible gastroenteritiscoronavirus} | Back alignment and structure |
|---|
| >3u30_A Ubiquitin, linear DI-ubiquitin; immune system; 2.43A {Homo sapiens} | Back alignment and structure |
|---|
| >3b08_A Polyubiquitin-C, ubiquitin; protein complex, signaling protein-metal binding protein COM; HET: TRE; 1.70A {Homo sapiens} PDB: 2w9n_A* 3b0a_A* 3axc_A 2zvn_A 2zvo_A 2y5b_B | Back alignment and structure |
|---|
| >3rt3_B Ubiquitin-like protein ISG15; ubiquitin-like domain, isgylation, antiviral protein-viral P complex; 2.01A {Homo sapiens} PDB: 3sdl_C 3r66_C 3pse_B 1z2m_A | Back alignment and structure |
|---|
| >2ylm_A Ubiquitin carboxyl-terminal hydrolase 7; UBL; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2fe8_A PP1AB, ORF1AB, replicase polyprotein 1AB; protease, hydrolase; 1.85A {Sars coronavirus} PDB: 3e9s_A* 3mj5_A* | Back alignment and structure |
|---|
| >2io1_B Small ubiquitin-related modifier 3 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.60A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3goe_A DNA repair protein RAD60; SUMO-like domain, sumoylation, SUMO, genome stability, DNA damage, DNA recombination, nucleus; HET: DNA; 0.97A {Schizosaccharomyces pombe} PDB: 3rcz_A* | Back alignment and structure |
|---|
| >2io0_B Small ubiquitin-related modifier 2 precursor; SUMO, SENP, ULP, complex, protein binding, hydrolase; 2.30A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3kyd_D Small ubiquitin-related modifier 1; SUMO, thioester, adenylation, inhibitor, TETR intermediate, ligase, nucleus, phosphoprotein; HET: VMX; 2.61A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B | Back alignment and structure |
|---|
| >2k8h_A Small ubiquitin protein; SUMO, post-translational modifier, signaling protein; NMR {Trypanosoma brucei} | Back alignment and structure |
|---|
| >2kj6_A Tubulin folding cofactor B; methods development, NESG, solution PSI-2, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2d07_B Ubiquitin-like protein SMT3B; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 2rpq_A 2awt_A 2io3_B 2iyd_B 1u4a_A 2k1f_A | Back alignment and structure |
|---|
| >3plu_A Ubiquitin-like modifier HUB1; ubiquitin-like, HUB-1, SNU66, peptide binding protein; 1.40A {Saccharomyces cerevisiae} PDB: 3plv_A 1m94_A 1p0r_A | Back alignment and structure |
|---|
| >3a4r_A Nfatc2-interacting protein; ubiquitin fold, coiled coil, cytoplasm, methylation, nucleus, transcription; 1.00A {Mus musculus} PDB: 3a4s_C 3rd2_A | Back alignment and structure |
|---|
| >3dbh_I NEDD8; cell cycle, activating enzyme, apoptosis, membrane, UBL conjugation pathway, ATP-binding, ligase, nucleotide- binding, polymorphism; 2.85A {Homo sapiens} SCOP: d.15.1.1 PDB: 3dbr_I 3dbl_I | Back alignment and structure |
|---|
| >2eke_C Ubiquitin-like protein SMT3; UBC9, SUMO binding motif, SBM, ligase/protein binding complex; 1.90A {Saccharomyces cerevisiae} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wz0_A Ubiquitin-like protein SMT3B; SUMO-2, ubiquitin-like molecule, structural genomics, sentrin2, NPPFSA; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wjn_A Tubulin-folding protein TBCE; ubiquitin-like domain, progressive motor neuropathy, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >4dbg_A Ranbp-type and C3HC4-type zinc finger-containing; ubiquitin fold, ubiquitination, ligase; 2.71A {Homo sapiens} PDB: 2lgy_A | Back alignment and structure |
|---|
| >3v6c_B Ubiquitin; structural genomics, structural genomics consortium, SGC, UB protease, hydrolase-signaling protein complex; 1.70A {Homo sapiens} PDB: 3v6e_B | Back alignment and structure |
|---|
| >2jxx_A Nfatc2-interacting protein; nuclear factor of activated T-cells, cytoplasmic 2- interacting protein, ubiquitin like homologue; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2l76_A Nfatc2-interacting protein; ubiquitin-like domain, structural genomics, PSI-biology, Pro structure initiative; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >2uyz_B Small ubiquitin-related modifier 1; sumoylation, cell division, nuclear protein, ubiquitin-like modifier, UBL conjugation pathway; 1.4A {Homo sapiens} SCOP: d.15.1.1 PDB: 2vrr_B 2iy0_B 2iy1_B 2g4d_B 2las_A 2io2_B 1z5s_B 3uip_B* 1tgz_B* 2bf8_B | Back alignment and structure |
|---|
| >2kjr_A CG11242; UBL, ubiquitin, ubiquitin-like, structural genomics, PSI-2, protein structure initiative; NMR {Drosophila melanogaster} | Back alignment and structure |
|---|
| >3plu_A Ubiquitin-like modifier HUB1; ubiquitin-like, HUB-1, SNU66, peptide binding protein; 1.40A {Saccharomyces cerevisiae} PDB: 3plv_A 1m94_A 1p0r_A | Back alignment and structure |
|---|
| >1wyw_B Ubiquitin-like protein SMT3C; hydrolase; 2.10A {Homo sapiens} SCOP: d.15.1.1 PDB: 1y8r_C* 2asq_A 2pe6_B 1a5r_A 2kqs_A 3kyc_D* 3rzw_C | Back alignment and structure |
|---|
| >3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >4hcn_B Polyubiquitin, ubiquitin; ubiquitin/NEDD8 deamidase, NEDD8, protein binding; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4b6w_A Tubulin-specific chaperone; CAP-Gly, ubiquitin-like; HET: MSE; 2.35A {Trypanosoma brucei brucei strain 927} | Back alignment and structure |
|---|
| >3mtn_B UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquitin-specific protease activity, hydrolase, ubiquitin B structural genomics consortium, SGC; 2.70A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wx7_A Ubiquilin 3; ubiquitin-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3phx_B Ubiquitin-like protein ISG15; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2bwf_A Ubiquitin-like protein DSK2; signaling protein, UBA, signaling proteins; 1.15A {Saccharomyces cerevisiae} SCOP: d.15.1.1 PDB: 2bwe_S | Back alignment and structure |
|---|
| >2kjr_A CG11242; UBL, ubiquitin, ubiquitin-like, structural genomics, PSI-2, protein structure initiative; NMR {Drosophila melanogaster} | Back alignment and structure |
|---|
| >4b6w_A Tubulin-specific chaperone; CAP-Gly, ubiquitin-like; HET: MSE; 2.35A {Trypanosoma brucei brucei strain 927} | Back alignment and structure |
|---|
| >3tix_A Ubiquitin-like protein SMT3, RNA-induced transcri silencing complex protein TAS3; PIN, rossmann fold, SPOC, alpha-helical hairpin, heterochrom silencing, RITS, RNAI, argonaute; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1wh3_A 59 kDa 2'-5'-oligoadenylate synthetase like protein; P59 OASL, ubiquitin family, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1j8c_A Ubiquitin-like protein hplic-2; ubiquitin-like domain, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2kj6_A Tubulin folding cofactor B; methods development, NESG, solution PSI-2, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >1v5o_A 1700011N24RIK protein; hypothetical protein, ubiquitin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3jyu_A Ubiquitin carboxyl-terminal hydrolase; domain in ubiquitin-specific peptidases (DUSP), proto- oncogene, ubiquitin-fold, UBL, protease, thioesterase; HET: 1PS; 2.37A {Mus musculus} | Back alignment and structure |
|---|
| >4a3p_A Ubiquitin carboxyl-terminal hydrolase 15; 1.40A {Homo sapiens} PDB: 4a3o_A 3pv1_A 3ppa_A* 3t9l_A 3lmn_A | Back alignment and structure |
|---|
| >4fbj_B NEDD8; effector-HOST target complex, glutamine deamidase, deamidati bacterial effector, cell cycle-protein binding complex; 1.60A {Homo sapiens} PDB: 4f8c_B | Back alignment and structure |
|---|
| >1uh6_A Ubiquitin-like 5; beta-grAsp fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1wx8_A Riken cDNA 4931431F19; ubiquitin-like domain, ubiquilin 1-like, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2hj8_A Interferon-induced 17 kDa protein; HR2873B, human ISG15, structure, northeast structural genomics consortium, protein structure initiative, NESG; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >1yqb_A Ubiquilin 3; structural genomics consortium, ubiquitin, ubiquitin-like domain, structural genomics, signaling protein SGC; 2.00A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2klc_A Ubiquilin-1; ubiquitin-like, structural genomics, PSI-2, protein structur initiative, northeast structural genomics consortium, NESG; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ... | Back alignment and structure |
|---|
| >1v6e_A Cytoskeleton-associated protein 1; tubulin-specific chaperone B, tubulin folding cofactor B, microtubule, ubiquitin-like fold, structural genomics; NMR {Mus musculus} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >3mtn_B UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquitin-specific protease activity, hydrolase, ubiquitin B structural genomics consortium, SGC; 2.70A {Homo sapiens} SCOP: d.15.1.1 | Back alignment and structure |
|---|
| >2l7r_A Ubiquitin-like protein FUBI; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; NMR {Homo sapiens} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 821 | ||||
| d1nbfa_ | 347 | d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase | 5e-80 | |
| d2gfoa1 | 348 | d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal h | 2e-46 | |
| d2hd5a1 | 336 | d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hy | 8e-45 | |
| d2ayna1 | 383 | d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hy | 4e-41 | |
| d1vjva_ | 397 | d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase | 6e-32 | |
| d1vjva_ | 397 | d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase | 6e-15 | |
| d2cr2a1 | 146 | b.8.1.1 (A:8-153) Speckle-type poz protein SPOP {H | 5e-29 | |
| d1czya1 | 152 | b.8.1.1 (A:350-501) TNF receptor associated factor | 6e-25 | |
| d1l0aa1 | 155 | b.8.1.1 (A:350-504) TNF receptor associated factor | 5e-24 | |
| d1lb6a_ | 155 | b.8.1.1 (A:) TNF receptor associated factor 6 (TRA | 1e-23 |
| >d1nbfa_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) species: Human (Homo sapiens) [TaxId: 9606]
Score = 259 bits (662), Expect = 5e-80
Identities = 193/364 (53%), Positives = 245/364 (67%), Gaps = 17/364 (4%)
Query: 191 KKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYK 250
KK TGYVGLKNQGATCYMNSLLQTL+ RKAVY MPT E D S S+PLALQ +FY+
Sbjct: 1 KKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPT-EGDDSSKSVPLALQRVFYE 59
Query: 251 LQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEG 310
LQ++D V TK+LTKSFGW+T DSFMQHDVQEL RVL + +E+KMKGT VEGTI +LF G
Sbjct: 60 LQHSDKPVGTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRG 119
Query: 311 HHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGL 370
++YI+C VDY+S R+E +YD+QL +KG ++++ SF YV VE+L+GDNKY A EHGL
Sbjct: 120 KMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVDYVAVEQLDGDNKYDAGEHGL 179
Query: 371 QDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDAD 430
Q+A+KGV F+ PPVL LQL RF YD D +KINDR+EFP QL LD D
Sbjct: 180 QEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEF-----LQKTD 234
Query: 431 RSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGE 490
Y LH+VLVHSG HGGHY ++ P +W KFDD+ V++ + A+E YGG
Sbjct: 235 PKDPANYILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGH 294
Query: 491 EELPPTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEE 550
++ +NAYMLVYIRES +++ V + DI + L RL++E+
Sbjct: 295 DD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRI 343
Query: 551 KEDK 554
+ K
Sbjct: 344 EAQK 347
|
| >d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
| >d2hd5a1 d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 336 | Back information, alignment and structure |
|---|
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} Length = 383 | Back information, alignment and structure |
|---|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 397 | Back information, alignment and structure |
|---|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 397 | Back information, alignment and structure |
|---|
| >d2cr2a1 b.8.1.1 (A:8-153) Speckle-type poz protein SPOP {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
| >d1czya1 b.8.1.1 (A:350-501) TNF receptor associated factor 2 (TRAF2) {Human (Homo sapiens) [TaxId: 9606]} Length = 152 | Back information, alignment and structure |
|---|
| >d1l0aa1 b.8.1.1 (A:350-504) TNF receptor associated factor 3 (TRAF3) {Human (Homo sapiens) [TaxId: 9606]} Length = 155 | Back information, alignment and structure |
|---|
| >d1lb6a_ b.8.1.1 (A:) TNF receptor associated factor 6 (TRAF6) {Human (Homo sapiens) [TaxId: 9606]} Length = 155 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 821 | |||
| d1nbfa_ | 347 | Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAU | 100.0 | |
| d2ayna1 | 383 | Ubiquitin carboxyl-terminal hydrolase 14 {Human (H | 100.0 | |
| d2gfoa1 | 348 | Ubiquitin carboxyl-terminal hydrolase 8 {Human (Ho | 100.0 | |
| d2hd5a1 | 336 | Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Hum | 100.0 | |
| d1vjva_ | 397 | Ubiquitin carboxyl-terminal hydrolase 6 {Baker's y | 100.0 | |
| d1czya1 | 152 | TNF receptor associated factor 2 (TRAF2) {Human (H | 99.85 | |
| d2cr2a1 | 146 | Speckle-type poz protein SPOP {Human (Homo sapiens | 99.84 | |
| d1l0aa1 | 155 | TNF receptor associated factor 3 (TRAF3) {Human (H | 99.83 | |
| d1lb6a_ | 155 | TNF receptor associated factor 6 (TRAF6) {Human (H | 99.82 | |
| d1wjna_ | 97 | Tubulin-folding protein TbcE {Mouse (Mus musculus) | 93.9 | |
| d1euvb_ | 79 | SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomy | 91.53 | |
| d2uyzb1 | 77 | SUMO-1 (smt3 homologue) {Human (Homo sapiens) [Tax | 91.17 | |
| d1wm3a_ | 72 | SUMO-2 {Human (Homo sapiens) [TaxId: 9606]} | 89.74 | |
| d2zeqa1 | 78 | Ubiquitin-like domain of parkin {Mouse (Mus muscul | 87.72 | |
| d1v5oa_ | 102 | 1700011n24rik protein {Mouse (Mus musculus) [TaxId | 87.43 | |
| d1m94a_ | 73 | Ubiquitin-like modifier protein hub1 {Baker's yeas | 86.7 | |
| d1v6ea_ | 95 | Ubiquitin-like domain of tubulin folding cofactor | 86.27 | |
| d1z2ma2 | 76 | Interferon-induced 15 kDa protein {Human (Homo sap | 85.65 | |
| d1qmya_ | 156 | FMDV leader protease {Foot-and-mouth disease virus | 84.91 | |
| d1z2ma1 | 76 | Interferon-induced 15 kDa protein {Human (Homo sap | 84.77 | |
| d1yqba1 | 84 | Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | 84.52 | |
| d1t0ya_ | 90 | Ubiquitin-like domain of tubulin folding cofactor | 84.03 | |
| d1uh6a_ | 100 | Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculu | 83.51 | |
| d1wh3a_ | 87 | 2'-5'-oligoadenylate synthetase-like protein, OASL | 83.48 | |
| d1ttna1 | 80 | Dendritic cell-derived ubiquitin-like protein {Hum | 83.39 | |
| d1m94a_ | 73 | Ubiquitin-like modifier protein hub1 {Baker's yeas | 83.25 | |
| d1wjna_ | 97 | Tubulin-folding protein TbcE {Mouse (Mus musculus) | 83.06 | |
| d1euvb_ | 79 | SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomy | 82.91 | |
| d1v6ea_ | 95 | Ubiquitin-like domain of tubulin folding cofactor | 82.87 | |
| d1zkha1 | 86 | Splicing factor 3 subunit 1, C-terminal domain {Hu | 82.85 | |
| d2bwfa1 | 73 | DSK2 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 82.58 | |
| d1wy8a1 | 76 | Ubiquitin-like PHD and RING finger domain-containi | 81.3 | |
| d1wx9a1 | 73 | Large proline-rich protein BAT3 {Human (Homo sapie | 81.09 | |
| d2uyzb1 | 77 | SUMO-1 (smt3 homologue) {Human (Homo sapiens) [Tax | 80.9 | |
| d1we6a_ | 111 | Splicing factor 3 subunit 1, C-terminal domain {Th | 80.35 | |
| d1wx8a1 | 83 | 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090] | 80.23 |
| >d1nbfa_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Cysteine proteinases superfamily: Cysteine proteinases family: Ubiquitin carboxyl-terminal hydrolase, UCH domain: Ubiquitin carboxyl-terminal hydrolase 7 (USP7, HAUSP) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-66 Score=566.54 Aligned_cols=343 Identities=55% Similarity=0.925 Sum_probs=315.6
Q ss_pred CCCcccccccCCCcccchhhHHHHhhccHhHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhcCCCcccchhHHHhhCCC
Q 003426 191 KKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDLPSGSIPLALQSLFYKLQYNDTSVATKELTKSFGWD 270 (821)
Q Consensus 191 k~~~g~~GL~N~GnTCYlNS~LQ~L~~~p~fr~~l~~~~~~~~~~~~~~~~~~Lq~Lf~~l~~s~~~v~~~~l~~~~~~~ 270 (821)
|++||++||.|+||||||||+||+|+++|+||++++..+.. ......++..+|++||..|+.+..++.+..+.+.++|.
T Consensus 1 ~~~~G~vGL~NlGNTCy~NSvLQ~L~~~~~f~~~i~~~~~~-~~~~~~~~~~~l~~lf~~l~~~~~~~~~~~~~~~~~~~ 79 (347)
T d1nbfa_ 1 KKHTGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTE-GDDSSKSVPLALQRVFYELQHSDKPVGTKKLTKSFGWE 79 (347)
T ss_dssp CCSSSCCCBCCCSSCHHHHHHHHHHHTSHHHHHHHHTSCCT-TCCTTTCHHHHHHHHHHHHHHCSSCBCCHHHHHHTTCC
T ss_pred CCCCCCcCCeeCCcchHHHHHHHHHHcCHHHHHHHHhCCcc-CCcccchHHHHHHHHHHHHhcCCCCcChHHHHHhhchh
Confidence 68999999999999999999999999999999999988763 44456789999999999999999999999999999999
Q ss_pred CCCccccCcHHHHHHHHHHHHHHHhcCCcccccccccceeEEeeEEEEeccCceeeeeeeeeeEEEeeCCCCCHHHHHHH
Q 003426 271 TYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDK 350 (821)
Q Consensus 271 ~~~~~~Q~Da~Ef~~~Lld~Le~~~~~~~~~~~i~~lF~g~~~~~i~C~~c~~~s~~~e~f~~l~l~v~~~~~l~esL~~ 350 (821)
.+..+.||||+||+..|++.|++++......+.|.++|.|++.+.++|..|++.+.+.|+|+.|+|+++...++.++|..
T Consensus 80 ~~~~~~qqDa~Ef~~~ll~~l~~~~~~~~~~~~i~~lF~g~~~~~~~C~~C~~~s~~~e~f~~l~L~i~~~~~~~~~l~~ 159 (347)
T d1nbfa_ 80 TLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKEVDYRSDRREDYYDIQLSIKGKKNIFESFVD 159 (347)
T ss_dssp GGGGGSCBCHHHHHHHHHHHHHHHHTTSTTTTHHHHHHCEEEEEEEEESSSCCEEEEEEEESSEEEECTTCCBHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHhhccccccccceeceEEEEeEEeCCccceeeeeccccccccccccccchhhhHHh
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred hhhhecccCCCccccccCCeeeeeeeEEEecCCCeeEEEEEEEEEcccccceeccCceEeCCccccCCccCCCCCCCCcC
Q 003426 351 YVEVERLEGDNKYHAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDAMVKINDRYEFPLQLDLDRENGKYLSPDAD 430 (821)
Q Consensus 351 ~~~~E~l~g~n~y~c~~c~~~~a~k~~~~~~lP~vL~i~L~Rf~~d~~~~~~~Ki~~~v~fP~~Ldl~~~~~~~l~~~~~ 430 (821)
++.+|.++|++++.|..|+..++.++..|.++|++|+|||+||.|+..++...|+++.|.||..||| ++|+....
T Consensus 160 ~~~~e~l~~~~~~~~~~~~~~~~~k~~~i~~lP~vL~i~l~Rf~~~~~~~~~~K~~~~v~fp~~Ldl----~~~~~~~~- 234 (347)
T d1nbfa_ 160 YVAVEQLDGDNKYDAGEHGLQEAEKGVKFLTLPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPL----DEFLQKTD- 234 (347)
T ss_dssp HTCCEEECGGGCEECSTTCEECEEEEEEEEECCSEEEEEEECEEEETTTTEEEECCCCCBCCSEEEC----GGGBSSCC-
T ss_pred hcchheeccccccccccCcceeccEEEEEEecCChheEeeeeeeeccccCcccccCceEeeeeeecc----cccccccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 67766543
Q ss_pred CCCCccEEEeEEEEEeecCCCccEEEEEEeCCCCCEEEeeCCceeEcchHhHHHhhcCCCCCCCCCCCCCCCCCcccccC
Q 003426 431 RSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPPTNPGFNNTPFKFTKY 510 (821)
Q Consensus 431 ~~~~~~Y~L~gVIvH~G~~~~GHY~ayir~~~~~~W~~fnD~~V~~v~~~~v~~~~~Gg~~~~~~~~~~~~~~~~~~~~~ 510 (821)
......|+|+|||+|.|++++|||+||+|...+++||+|||+.|+++++++|+..+|||..... .....
T Consensus 235 ~~~~~~Y~L~~vI~H~G~~~~GHY~~~~~~~~~~~W~~fnD~~V~~v~~~ev~~~~~g~~~~~~-----------~~~~~ 303 (347)
T d1nbfa_ 235 PKDPANYILHAVLVHSGDNHGGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDDDL-----------SVRHC 303 (347)
T ss_dssp TTSCCEEEEEEEEEEEEETTEEEEEEEECTTSSSCCEEEETTEEEECCHHHHTGGGSCCCCSCC-----------STTTT
T ss_pred ccCccceeeEEEEEecCCCCCCEEEEeeecCCCCEEEEEECCceEECCHHHHHHhhcCCCcccc-----------ccCCC
Confidence 2346789999999999988999999999987788999999999999999999999999975321 12234
Q ss_pred ccEEEEEEEeecccccccccCCccchhHHHHHHHHHHHHH
Q 003426 511 SNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLKKEQEE 550 (821)
Q Consensus 511 ~~AYmL~Y~R~~~~~~~~~~~~~~~ip~~l~~~~~~e~~~ 550 (821)
.+||||||+|++..+++..++++.+||+++.+++++|++.
T Consensus 304 ~~aYiLfY~r~~~~~~~~~~~~~~~~~~~l~~~~~e~~~~ 343 (347)
T d1nbfa_ 304 TNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRI 343 (347)
T ss_dssp EEEEEEEEEEGGGHHHHTCCCCGGGSCHHHHHHHHTHHHH
T ss_pred CCEEEEEEEecCchHHhhCCCCccccCHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999887654
|
| >d2ayna1 d.3.1.9 (A:100-482) Ubiquitin carboxyl-terminal hydrolase 14 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2gfoa1 d.3.1.9 (A:762-1109) Ubiquitin carboxyl-terminal hydrolase 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hd5a1 d.3.1.9 (A:211-521) Ubiquitin carboxyl-terminal hydrolase 2, USP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vjva_ d.3.1.9 (A:) Ubiquitin carboxyl-terminal hydrolase 6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1czya1 b.8.1.1 (A:350-501) TNF receptor associated factor 2 (TRAF2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2cr2a1 b.8.1.1 (A:8-153) Speckle-type poz protein SPOP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l0aa1 b.8.1.1 (A:350-504) TNF receptor associated factor 3 (TRAF3) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lb6a_ b.8.1.1 (A:) TNF receptor associated factor 6 (TRAF6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wjna_ d.15.1.1 (A:) Tubulin-folding protein TbcE {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wm3a_ d.15.1.1 (A:) SUMO-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1v5oa_ d.15.1.1 (A:) 1700011n24rik protein {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1v6ea_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1z2ma2 d.15.1.1 (A:79-154) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qmya_ d.3.1.2 (A:) FMDV leader protease {Foot-and-mouth disease virus [TaxId: 12110]} | Back information, alignment and structure |
|---|
| >d1z2ma1 d.15.1.1 (A:3-78) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1t0ya_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1uh6a_ d.15.1.1 (A:) Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ttna1 d.15.1.1 (A:21-100) Dendritic cell-derived ubiquitin-like protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1wjna_ d.15.1.1 (A:) Tubulin-folding protein TbcE {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1v6ea_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1zkha1 d.15.1.1 (A:1-86) Splicing factor 3 subunit 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bwfa1 d.15.1.1 (A:2-74) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1wy8a1 d.15.1.1 (A:8-83) Ubiquitin-like PHD and RING finger domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wx9a1 d.15.1.1 (A:8-80) Large proline-rich protein BAT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1we6a_ d.15.1.1 (A:) Splicing factor 3 subunit 1, C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wx8a1 d.15.1.1 (A:8-90) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|