Citrus Sinensis ID: 003511
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | 2.2.26 [Sep-21-2011] | |||||||
| Q2TAC6 | 998 | Kinesin-like protein KIF1 | yes | no | 0.657 | 0.536 | 0.368 | 5e-94 | |
| Q7ZXX2 | 997 | Kinesin-like protein KIF1 | N/A | no | 0.640 | 0.522 | 0.370 | 4e-91 | |
| Q99PT9 | 997 | Kinesin-like protein KIF1 | yes | no | 0.657 | 0.536 | 0.357 | 6e-90 | |
| Q86Y91 | 864 | Kinesin-like protein KIF1 | no | no | 0.466 | 0.439 | 0.446 | 1e-87 | |
| Q6PFD6 | 834 | Kinesin-like protein KIF1 | no | no | 0.441 | 0.430 | 0.437 | 1e-82 | |
| Q4KLL9 | 826 | Kinesin-like protein KIF1 | no | no | 0.441 | 0.434 | 0.442 | 1e-82 | |
| Q5ZLK6 | 797 | Kinesin-like protein KIF1 | no | no | 0.422 | 0.431 | 0.453 | 6e-82 | |
| O59751 | 784 | Kinesin-like protein 6 OS | yes | no | 0.525 | 0.545 | 0.377 | 1e-78 | |
| Q91WD7 | 886 | Kinesin-like protein KIF1 | no | no | 0.463 | 0.425 | 0.404 | 2e-78 | |
| Q8NI77 | 898 | Kinesin-like protein KIF1 | no | no | 0.554 | 0.502 | 0.371 | 2e-78 |
| >sp|Q2TAC6|KIF19_HUMAN Kinesin-like protein KIF19 OS=Homo sapiens GN=KIF19 PE=2 SV=2 | Back alignment and function desciption |
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Score = 346 bits (887), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 222/602 (36%), Positives = 346/602 (57%), Gaps = 67/602 (11%)
Query: 11 KSTTLTVAIKCRPLT--EREQGRDIVRVKHDKEVVVL-----DPDFSKDYLDHIQNRTKE 63
K L VA++ RP++ E E+G ++ K D+++VVL DPD D L +R++E
Sbjct: 8 KDQQLMVALRVRPISVAELEEGATLIAHKVDEQMVVLMDPMEDPD---DILR--AHRSRE 62
Query: 64 KNYCFDRAFGPGCTNLDVYTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPG 123
K+Y FD AF T VY A S+I GV+ G NATVFAYG TG GKTYTM+GT +PG
Sbjct: 63 KSYLFDVAFDFTATQEMVYQATTKSLIEGVISGYNATVFAYGPTGCGKTYTMLGTDQEPG 122
Query: 124 LMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKSSAHLELREDPMHGIVVA 183
+ V +L+ +F I++ N E+EVS SYLE+YNE+I DLL S +LELRED I VA
Sbjct: 123 IYVQTLNDLFRAIEETSNDMEYEVSMSYLEIYNEMIRDLLNPSLGYLELREDSKGVIQVA 182
Query: 184 GLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTE-YCNQVM 242
G+ + +A +I++LL GN +R E T AN TSSRSHAVL++TV++R + + +V
Sbjct: 183 GITEVSTINAKEIMQLLMKGNRQRTQEPTAANQTSSRSHAVLQVTVRQRSRVKNILQEVR 242
Query: 243 RGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRN 302
+G+L ++DLAGSERAS+ + GQ++++GA+INRSLLAL NCINAL K Y+ YR+
Sbjct: 243 QGRLFMIDLAGSERASQTQNRGQRMKEGAHINRSLLALGNCINALS--DKGSNKYINYRD 300
Query: 303 SKLTRILKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSIDTH 362
SKLTR+LKD L GNS+TVM+A ISP S + + NTL YA RAK IKT +++N+ ++ H
Sbjct: 301 SKLTRLLKDSLGGNSRTVMIAHISPASSAFEESRNTLTYAGRAKNIKTRVKQNLLNVSYH 360
Query: 363 VSDYQRMIDNLQIEVCRLKKELADKDSQPSVKPAEKAAD--------------DELSWLN 408
++ Y +I +L+ E+ RLK+++ ++ + + + D E + +
Sbjct: 361 IAQYTSIIADLRGEIQRLKRKIDEQTGRGQARGRQDRGDIRHIQAEVQLHSGQGEKAGMG 420
Query: 409 VLSLEISENAQERINLQNALFELEETNLRI-------------------RAELQYLDDAI 449
L +++ QE+++++ L ELE + + R L++ ++
Sbjct: 421 QLREQLASAFQEQMDVRRRLLELENRAMEVQIDTSRHLLTIAGWKHEKSRRALKWREE-- 478
Query: 450 AKKQAIGKDDAVVEALKSRRQI-ILD-----NIRENDEAGINYQKEIEENE---SRRC-- 498
+K+ KDD+ ++ Q IL+ RE+ A ++ QK++ + + +RC
Sbjct: 479 QRKECYAKDDSEKDSDTGDDQPDILEPPEVAAARESIAALVDEQKQLRKQKLALEQRCRE 538
Query: 499 ------ELQKMIDEAVSSNGNKTYLRILSQYRILGMANIELQFEMAMRDQVIHNQRAAQR 552
L++ + + S + L +L + L + N E+Q +RD + ++ A R
Sbjct: 539 LRARGRRLEETLPRRIGSEEQREVLSLLCRVHELEVENTEMQSHALLRDGALRHRHEAVR 598
Query: 553 QL 554
+L
Sbjct: 599 RL 600
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Homo sapiens (taxid: 9606) |
| >sp|Q7ZXX2|KIF19_XENLA Kinesin-like protein KIF19 OS=Xenopus laevis GN=kif19 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q99PT9|KIF19_MOUSE Kinesin-like protein KIF19 OS=Mus musculus GN=Kif19 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q86Y91|KI18B_HUMAN Kinesin-like protein KIF18B OS=Homo sapiens GN=KIF18B PE=1 SV=3 | Back alignment and function description |
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| >sp|Q6PFD6|KI18B_MOUSE Kinesin-like protein KIF18B OS=Mus musculus GN=Kif18b PE=2 SV=2 | Back alignment and function description |
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| >sp|Q4KLL9|KI18B_RAT Kinesin-like protein KIF18B OS=Rattus norvegicus GN=Kif18b PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5ZLK6|KI18B_CHICK Kinesin-like protein KIF18B OS=Gallus gallus GN=KIF18B PE=2 SV=1 | Back alignment and function description |
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| >sp|O59751|KLP6_SCHPO Kinesin-like protein 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=klp6 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q91WD7|KI18A_MOUSE Kinesin-like protein KIF18A OS=Mus musculus GN=Kif18a PE=2 SV=1 | Back alignment and function description |
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| >sp|Q8NI77|KI18A_HUMAN Kinesin-like protein KIF18A OS=Homo sapiens GN=KIF18A PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | ||||||
| 255576027 | 829 | Chromosome-associated kinesin KIF4A, put | 0.998 | 0.980 | 0.710 | 0.0 | |
| 359480532 | 809 | PREDICTED: kinesin-like protein KIF19-li | 0.931 | 0.936 | 0.741 | 0.0 | |
| 147818972 | 1817 | hypothetical protein VITISV_026465 [Viti | 0.926 | 0.414 | 0.712 | 0.0 | |
| 297735858 | 715 | unnamed protein product [Vitis vinifera] | 0.869 | 0.990 | 0.687 | 0.0 | |
| 297819612 | 819 | hypothetical protein ARALYDRAFT_906263 [ | 0.842 | 0.837 | 0.719 | 0.0 | |
| 15229185 | 813 | P-loop containing nucleoside triphosphat | 0.842 | 0.843 | 0.718 | 0.0 | |
| 110737803 | 813 | kinesin like protein [Arabidopsis thalia | 0.842 | 0.843 | 0.716 | 0.0 | |
| 449451573 | 706 | PREDICTED: kinesin-like protein KIF19-li | 0.818 | 0.943 | 0.689 | 0.0 | |
| 242037969 | 724 | hypothetical protein SORBIDRAFT_01g00670 | 0.880 | 0.990 | 0.663 | 0.0 | |
| 222625881 | 729 | hypothetical protein OsJ_12760 [Oryza sa | 0.890 | 0.994 | 0.657 | 0.0 |
| >gi|255576027|ref|XP_002528909.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis] gi|223531663|gb|EEF33489.1| Chromosome-associated kinesin KIF4A, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1184 bits (3062), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 581/818 (71%), Positives = 663/818 (81%), Gaps = 5/818 (0%)
Query: 1 MPGISAPATKKSTTLTVAIKCRPLTEREQGRDIVRVKHDKEVVVLDPDFSKDYLDHIQNR 60
MP I APATK+STTLTVA+KCRPLTERE+GR+IVRV +KEV++LDPD SKDYLD IQNR
Sbjct: 1 MPTIRAPATKRSTTLTVAVKCRPLTERERGRNIVRVNDNKEVIILDPDLSKDYLDRIQNR 60
Query: 61 TKEKNYCFDRAFGPGCTNLDVYTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKS 120
TKEK YCFD AFGP TNL VY ISS++SGV+QGLN TVFAYGSTGSGKTYTMVGT+
Sbjct: 61 TKEKKYCFDYAFGPDSTNLAVYNRSISSIVSGVIQGLNVTVFAYGSTGSGKTYTMVGTQD 120
Query: 121 DPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKSSAHLELREDPMHGI 180
DPGLMVLSLH IFDLIKKDK+SDEFEVSCSYLEVYNEVIYDLLEKSS HLELREDP GI
Sbjct: 121 DPGLMVLSLHAIFDLIKKDKSSDEFEVSCSYLEVYNEVIYDLLEKSSGHLELREDPEQGI 180
Query: 181 VVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQ 240
+V GLRCIKV SA+KILELLN+GNSRRKTE+TEAN TSSRSHAVLEI VKR+++ +Y NQ
Sbjct: 181 IVVGLRCIKVQSANKILELLNMGNSRRKTESTEANATSSRSHAVLEIIVKRKRRNKYRNQ 240
Query: 241 VMRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPY 300
VM+GKL+LVDLAGSERASE NSGGQKLRDGANINRSLLALANCINALGK QKKGLAYVPY
Sbjct: 241 VMKGKLALVDLAGSERASETNSGGQKLRDGANINRSLLALANCINALGKQQKKGLAYVPY 300
Query: 301 RNSKLTRILKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSID 360
RNSKLTRILKDGLSGNSQTVMVATISP ++QYHHT+NTLKYADRAK+IKTHIQ+NIG+ID
Sbjct: 301 RNSKLTRILKDGLSGNSQTVMVATISPANNQYHHTINTLKYADRAKEIKTHIQENIGTID 360
Query: 361 THVSDYQRMIDNLQIEVCRLKKELADKDSQPSVKPAEKAADDELSWLNVLSLEISENAQE 420
THVSDYQ+MIDNLQIEVCRL+KELA+K+S SVKPAEKA DDELSWLN+LS E SEN QE
Sbjct: 361 THVSDYQKMIDNLQIEVCRLRKELANKESLLSVKPAEKAVDDELSWLNILSCETSENVQE 420
Query: 421 RINLQNALFELEETNLRIRAELQYLDDAIAKKQAIGKDDAVVEALKSRRQIILDNIREND 480
RINLQ ALFELEETNL R ELQ+LDDAIAK+QAI K+ AVVEAL++RRQ+ILDNIR+ND
Sbjct: 421 RINLQKALFELEETNLHNRIELQHLDDAIAKQQAIEKEGAVVEALRARRQVILDNIRDND 480
Query: 481 EAGINYQKEIEENESRRCELQKMIDEAVSSNGNKTYLRILSQYRILGMANIELQFEMAMR 540
EAGINYQKEIE NE RC+LQ MI++A+S +GNKTYLRILSQYR+LGMAN ELQFEMAMR
Sbjct: 481 EAGINYQKEIEANEKHRCQLQDMIEKAISKDGNKTYLRILSQYRLLGMANTELQFEMAMR 540
Query: 541 DQVIHNQRAAQRQLWNLLMRSGVDEKHLLDLAAKHGITIEDWSMDSHVGLPERKKSM-DF 599
DQ+IHNQR AQR+LWNLLM G+DEK +LDLA KHGI IEDW+M H+G+ ++ D
Sbjct: 541 DQIIHNQRQAQRKLWNLLMGLGLDEKRVLDLAVKHGIIIEDWTMIPHLGVANKQSPYSDS 600
Query: 600 SPGRYTRSGCSPCIGQLYSRSSCIFQHHEDFSSRFSPAGLWDPARTVCREEHRRSYYFLS 659
+ GRY +G SPCIGQ +S + +FQ +DF SR G WD +R CREEH SYY S
Sbjct: 601 ALGRYPSTGNSPCIGQSFS-GAHVFQQFQDFGSRSFSKGPWDASRAFCREEHYSSYYMPS 659
Query: 660 HDHSPSTYLKLRNCSEQWIDSTPGSWFETPGKHPQDFRSSCPEIRTLASPFSESYLPASH 719
HD SP YL+LR ++ W + PGSWF TP K PQD SSCPE+ T ASP + + AS
Sbjct: 660 HDQSPPAYLRLRKSTDHWAGNFPGSWFGTPTKRPQDLCSSCPELGTWASPCKDGFQSASP 719
Query: 720 HSADFCQLFKDVWNITKRQNPLEGPQFEITSSPDFYREKVTGHCETTR--VAGYNPLEQS 777
ADF +D WN RQ+ E P ++ S + + + + T R NPLEQ+
Sbjct: 720 FRADFSHQLEDAWNNASRQHLFEAPLSAMSHSQELQKRAMMSYGGTARGFFGHNNPLEQA 779
Query: 778 SSIHCSNPISQNTESSNCPNLSCIPSFDANGS-NFCFP 814
S +H SN I Q+TE S+ NLS IPSF G +F P
Sbjct: 780 SGLHSSNHIFQHTEPSSGQNLSHIPSFSTAGQISFVTP 817
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359480532|ref|XP_003632483.1| PREDICTED: kinesin-like protein KIF19-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297735858|emb|CBI18612.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297819612|ref|XP_002877689.1| hypothetical protein ARALYDRAFT_906263 [Arabidopsis lyrata subsp. lyrata] gi|297323527|gb|EFH53948.1| hypothetical protein ARALYDRAFT_906263 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|15229185|ref|NP_190534.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] gi|6561965|emb|CAB62469.1| kinesin-like protein [Arabidopsis thaliana] gi|332645051|gb|AEE78572.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|110737803|dbj|BAF00840.1| kinesin like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449451573|ref|XP_004143536.1| PREDICTED: kinesin-like protein KIF19-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|242037969|ref|XP_002466379.1| hypothetical protein SORBIDRAFT_01g006700 [Sorghum bicolor] gi|241920233|gb|EER93377.1| hypothetical protein SORBIDRAFT_01g006700 [Sorghum bicolor] | Back alignment and taxonomy information |
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| >gi|222625881|gb|EEE60013.1| hypothetical protein OsJ_12760 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 814 | ||||||
| TAIR|locus:2114728 | 813 | AT3G49650 [Arabidopsis thalian | 0.842 | 0.843 | 0.722 | 4e-264 | |
| UNIPROTKB|E1BFF4 | 999 | KIF19 "Uncharacterized protein | 0.582 | 0.474 | 0.411 | 8.9e-92 | |
| ZFIN|ZDB-GENE-090312-134 | 991 | si:dkey-26i13.8 "si:dkey-26i13 | 0.520 | 0.427 | 0.440 | 4.9e-91 | |
| UNIPROTKB|Q7ZXX2 | 997 | kif19 "Kinesin-like protein KI | 0.740 | 0.604 | 0.367 | 3.1e-90 | |
| UNIPROTKB|J9NX08 | 1000 | KIF19 "Uncharacterized protein | 0.686 | 0.559 | 0.376 | 1.2e-89 | |
| ZFIN|ZDB-GENE-080215-2 | 1015 | kif19 "kinesin family member 1 | 0.723 | 0.580 | 0.381 | 4.6e-89 | |
| UNIPROTKB|F1N4G9 | 521 | F1N4G9 "Uncharacterized protei | 0.527 | 0.823 | 0.419 | 2.1e-88 | |
| UNIPROTKB|I3LEH8 | 1001 | KIF19 "Uncharacterized protein | 0.678 | 0.551 | 0.386 | 6.7e-88 | |
| UNIPROTKB|Q2TAC6 | 998 | KIF19 "Kinesin-like protein KI | 0.689 | 0.562 | 0.379 | 9.9e-87 | |
| RGD|1559936 | 997 | Kif19 "kinesin family member 1 | 0.690 | 0.563 | 0.371 | 2e-86 |
| TAIR|locus:2114728 AT3G49650 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2541 (899.5 bits), Expect = 4.0e-264, P = 4.0e-264
Identities = 513/710 (72%), Positives = 582/710 (81%)
Query: 1 MPGISAPATKKSTTLTVAIKCRPLTEREQGRDIVRVKHDKEVVVLDPDFSKDYLDHIQNR 60
MP I APA KK+TTLTVA+KCRPL E+E+GRDIVRV + KEVVVLDPD SKDYLD IQNR
Sbjct: 1 MPSIRAPAAKKTTTLTVAVKCRPLMEKERGRDIVRVNNSKEVVVLDPDLSKDYLDRIQNR 60
Query: 61 TKEKNYCFDRAFGPGCTNLDVYTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKS 120
TKEK YCFD AFGP TN +VY + +SSVIS VV GLNATVFAYGSTGSGKTYTMVGT+S
Sbjct: 61 TKEKKYCFDHAFGPESTNKNVYRS-MSSVISSVVHGLNATVFAYGSTGSGKTYTMVGTRS 119
Query: 121 DPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKSSAHLELREDPMHGI 180
DPGLMVLSL+TIFD+IK DK+SDEFEV+CSYLEVYNEVIYDLLEKSS HLELREDP GI
Sbjct: 120 DPGLMVLSLNTIFDMIKSDKSSDEFEVTCSYLEVYNEVIYDLLEKSSGHLELREDPEQGI 179
Query: 181 VVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQ 240
VVAGLR IKVHSAD+ILELLNLGNSRRKTE+TE NGTSSRSHAVLEI VKRRQK + NQ
Sbjct: 180 VVAGLRSIKVHSADRILELLNLGNSRRKTESTEMNGTSSRSHAVLEIAVKRRQKNQ--NQ 237
Query: 241 VMRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPY 300
VMRGKL+LVDLAGSERA+E N+GGQKLRDGANINRSLLALANCINALGK KKGLAYVPY
Sbjct: 238 VMRGKLALVDLAGSERAAETNNGGQKLRDGANINRSLLALANCINALGKQHKKGLAYVPY 297
Query: 301 RNSKLTRILKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSID 360
RNSKLTRILKDGLSGNSQTVMVATISP DSQYHHT+NTLKYADRAK+IKTHIQKNIG+ID
Sbjct: 298 RNSKLTRILKDGLSGNSQTVMVATISPADSQYHHTVNTLKYADRAKEIKTHIQKNIGTID 357
Query: 361 THVSDYQRMIDNLQIEVCRLKKELADKDSQPSVKPAEKAADDELSWLNVLSLEISENAQE 420
TH+SDYQRMIDNLQ EV +LK +LA+K+SQ S+KP E+ + ELSWL+ LS +ISEN Q+
Sbjct: 358 THMSDYQRMIDNLQSEVSQLKTQLAEKESQLSIKPFERGVERELSWLDGLSHQISENVQD 417
Query: 421 RINLQNALFELEETNLRIRAELQYLDDAIAKKQAIGKDDAVVEALKSRRQIILDNIREND 480
RINLQ ALFELEETNLR R ELQ+LDDAIAK QA KD VVEAL SRRQ+ILDNIR+ND
Sbjct: 418 RINLQKALFELEETNLRNRTELQHLDDAIAK-QATEKD--VVEALSSRRQVILDNIRDND 474
Query: 481 EAGINYQKEIEENESRRCELQKMIDEAVSSNGNKTYLRILSQYRILGMANIELQFEMAMR 540
EAG+NYQ++IEENE RCELQ M++EA+++NGNKTYL IL+QY++LGM N ELQFEMAMR
Sbjct: 475 EAGVNYQRDIEENEKHRCELQDMLNEAINNNGNKTYLHILNQYKLLGMGNTELQFEMAMR 534
Query: 541 DQVIHNQRAAQRQLWNLLMRSGVDEKHLLDLAAKHGITIEDWSMDS-HVGLPERKKSMDF 599
DQ+I+NQR AQR LWNLLM GV+EK + DLAAK GITIEDWS + GLP RK++ F
Sbjct: 535 DQIIYNQREAQRNLWNLLMGLGVEEKQVFDLAAKQGITIEDWSSIALFPGLPYRKQTPSF 594
Query: 600 SPGRYTRSGCSPCIGQLYSRSSCIFQHHEDFSSRFSPAGLWDPARTVCREEHRRSYYFLS 659
P P +G YS+SSC FQ ++D SS+ W P T+CREEH SYYF+
Sbjct: 595 IPANI------PFVGHSYSKSSCTFQSYQDPSSKGQQ---WAPTPTLCREEHHSSYYFMR 645
Query: 660 HDHSPSTYLKLRNCSEQWID-STPGSWFETPGKH-----PQDFRSSCPEI 703
+ P ++ LR + W+ S P S +T G H PQ +S P +
Sbjct: 646 QE--PPAFVNLRKSHDGWVGGSRPASRIDTGGNHRRVSYPQTVNNSSPRM 693
|
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| UNIPROTKB|E1BFF4 KIF19 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-090312-134 si:dkey-26i13.8 "si:dkey-26i13.8" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7ZXX2 kif19 "Kinesin-like protein KIF19" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
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| UNIPROTKB|J9NX08 KIF19 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-080215-2 kif19 "kinesin family member 19" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1N4G9 F1N4G9 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LEH8 KIF19 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2TAC6 KIF19 "Kinesin-like protein KIF19" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| RGD|1559936 Kif19 "kinesin family member 19" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | scaffold_501967.1 | annotation not avaliable (819 aa) | ||||||
(Arabidopsis lyrata) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 814 | |||
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 0.0 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-140 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-135 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-126 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 1e-106 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 1e-103 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 1e-101 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 1e-101 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 1e-99 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 4e-97 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 3e-94 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 2e-91 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 6e-83 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 9e-80 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 3e-77 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 1e-71 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 3e-69 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 9e-51 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 1e-33 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 3e-06 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.001 | |
| COG1196 | 1163 | COG1196, Smc, Chromosome segregation ATPases [Cell | 0.002 |
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
Score = 525 bits (1354), Expect = 0.0
Identities = 193/340 (56%), Positives = 238/340 (70%), Gaps = 7/340 (2%)
Query: 14 TLTVAIKCRPLTERE---QGRDIVRVKHDKEVVVLDPDFSKDYL-DHIQNRTKEKNYCFD 69
+LTVA++ RP E+E R +V+V D ++V DP +D + R KE Y FD
Sbjct: 1 SLTVAVRVRPFNEKEKQEGTRRVVKVV-DDRMLVFDPKDEEDAFRNLRARRNKELKYSFD 59
Query: 70 RAFGPGCTNLDVYTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPGLMVLSL 129
R F T +VY ++ GV+ G NATVFAYG+TG+GKT+TM+GT SDPGLMVL++
Sbjct: 60 RVFDETSTQEEVYENTTKPLVDGVLNGYNATVFAYGATGAGKTHTMLGTDSDPGLMVLTM 119
Query: 130 HTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKSSAHLELREDPMHGIVVAGLRCIK 189
+FD I++ K+ EFEVS SYLE+YNE I DLL SS LELREDP GIVVAGL +
Sbjct: 120 KDLFDKIEERKDDKEFEVSLSYLEIYNETIRDLLSPSSGPLELREDPNQGIVVAGLTEHQ 179
Query: 190 VHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCN-QVMRGKLSL 248
SA++ILELL GN R E TEAN TSSRSHAVL+ITV+++ +T N QV GKLSL
Sbjct: 180 PKSAEEILELLMKGNRNRTQEPTEANATSSRSHAVLQITVRQKDRTASINQQVRIGKLSL 239
Query: 249 VDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRI 308
+DLAGSERAS N+ GQ+L++GANINRSLLAL NCINAL KK ++PYR+SKLTR+
Sbjct: 240 IDLAGSERASATNNRGQRLKEGANINRSLLALGNCINALVDG-KKKNKHIPYRDSKLTRL 298
Query: 309 LKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKI 348
LKD L GN +TVM+A ISP S Y T NTLKYA+RAK I
Sbjct: 299 LKDSLGGNCKTVMIANISPSSSHYEETHNTLKYANRAKNI 338
|
The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 338 |
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 97.17 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 97.05 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 96.51 | |
| KOG0971 | 1243 | consensus Microtubule-associated protein dynactin | 96.44 | |
| PF09726 | 697 | Macoilin: Transmembrane protein; InterPro: IPR0191 | 96.31 | |
| PF09789 | 319 | DUF2353: Uncharacterized coiled-coil protein (DUF2 | 96.14 | |
| PRK11637 | 428 | AmiB activator; Provisional | 96.1 | |
| PRK09039 | 343 | hypothetical protein; Validated | 95.96 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 95.74 | |
| COG4372 | 499 | Uncharacterized protein conserved in bacteria with | 95.63 | |
| TIGR02169 | 1164 | SMC_prok_A chromosome segregation protein SMC, pri | 95.52 | |
| PRK11637 | 428 | AmiB activator; Provisional | 95.51 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 95.32 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 95.28 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 95.21 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 95.11 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 95.07 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 94.95 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 94.79 | |
| TIGR02168 | 1179 | SMC_prok_B chromosome segregation protein SMC, com | 94.34 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 94.3 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 94.27 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 94.12 | |
| COG1196 | 1163 | Smc Chromosome segregation ATPases [Cell division | 94.09 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 94.06 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 94.0 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 93.99 | |
| KOG0250 | 1074 | consensus DNA repair protein RAD18 (SMC family pro | 93.9 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 93.9 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 93.9 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 93.82 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 93.75 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 93.7 | |
| PRK03918 | 880 | chromosome segregation protein; Provisional | 93.68 | |
| PF07888 | 546 | CALCOCO1: Calcium binding and coiled-coil domain ( | 93.58 | |
| PF04849 | 306 | HAP1_N: HAP1 N-terminal conserved region; InterPro | 93.51 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 93.48 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 93.44 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 93.22 | |
| PRK04863 | 1486 | mukB cell division protein MukB; Provisional | 93.1 | |
| PF12128 | 1201 | DUF3584: Protein of unknown function (DUF3584); In | 92.99 | |
| KOG4673 | 961 | consensus Transcription factor TMF, TATA element m | 92.94 | |
| KOG0999 | 772 | consensus Microtubule-associated protein Bicaudal- | 92.81 | |
| TIGR03017 | 444 | EpsF chain length determinant protein EpsF. Sequen | 92.8 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 92.74 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 92.67 | |
| KOG0161 | 1930 | consensus Myosin class II heavy chain [Cytoskeleto | 92.59 | |
| KOG0980 | 980 | consensus Actin-binding protein SLA2/Huntingtin-in | 92.39 | |
| PF15254 | 861 | CCDC14: Coiled-coil domain-containing protein 14 | 91.91 | |
| KOG0964 | 1200 | consensus Structural maintenance of chromosome pro | 91.82 | |
| KOG0977 | 546 | consensus Nuclear envelope protein lamin, intermed | 91.81 | |
| TIGR01005 | 754 | eps_transp_fam exopolysaccharide transport protein | 91.72 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 91.42 | |
| TIGR00606 | 1311 | rad50 rad50. This family is based on the phylogeno | 91.19 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 91.18 | |
| KOG0946 | 970 | consensus ER-Golgi vesicle-tethering protein p115 | 91.15 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 91.08 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 91.05 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 90.76 | |
| COG4942 | 420 | Membrane-bound metallopeptidase [Cell division and | 90.71 | |
| KOG1899 | 861 | consensus LAR transmembrane tyrosine phosphatase-i | 90.61 | |
| KOG0982 | 502 | consensus Centrosomal protein Nuf [Cell cycle cont | 90.59 | |
| KOG0996 | 1293 | consensus Structural maintenance of chromosome pro | 90.53 | |
| PHA02562 | 562 | 46 endonuclease subunit; Provisional | 90.51 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 90.41 | |
| KOG4643 | 1195 | consensus Uncharacterized coiled-coil protein [Fun | 90.38 | |
| KOG1029 | 1118 | consensus Endocytic adaptor protein intersectin [S | 90.2 | |
| PF15070 | 617 | GOLGA2L5: Putative golgin subfamily A member 2-lik | 89.91 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 89.71 | |
| KOG0976 | 1265 | consensus Rho/Rac1-interacting serine/threonine ki | 89.58 | |
| PRK09039 | 343 | hypothetical protein; Validated | 89.45 | |
| PRK02224 | 880 | chromosome segregation protein; Provisional | 89.43 | |
| PRK06620 | 214 | hypothetical protein; Validated | 89.02 | |
| KOG1937 | 521 | consensus Uncharacterized conserved protein [Funct | 89.01 | |
| COG1579 | 239 | Zn-ribbon protein, possibly nucleic acid-binding [ | 88.77 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 88.72 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 88.62 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 88.48 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 88.4 | |
| KOG0979 | 1072 | consensus Structural maintenance of chromosome pro | 88.14 | |
| KOG4302 | 660 | consensus Microtubule-associated protein essential | 87.94 | |
| PF08317 | 325 | Spc7: Spc7 kinetochore protein; InterPro: IPR01325 | 87.92 | |
| PRK04778 | 569 | septation ring formation regulator EzrA; Provision | 87.72 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 87.66 | |
| PF09730 | 717 | BicD: Microtubule-associated protein Bicaudal-D; I | 87.5 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 87.37 | |
| PF05667 | 594 | DUF812: Protein of unknown function (DUF812); Inte | 87.36 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 86.76 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 86.56 | |
| PRK12377 | 248 | putative replication protein; Provisional | 86.38 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 86.3 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 86.19 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 85.87 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 85.81 | |
| PF13851 | 201 | GAS: Growth-arrest specific micro-tubule binding | 85.74 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 85.72 | |
| PRK08116 | 268 | hypothetical protein; Validated | 85.71 | |
| PRK06835 | 329 | DNA replication protein DnaC; Validated | 85.5 | |
| PRK11281 | 1113 | hypothetical protein; Provisional | 85.35 | |
| PRK09087 | 226 | hypothetical protein; Validated | 85.02 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 84.54 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 84.43 | |
| PRK06526 | 254 | transposase; Provisional | 84.34 | |
| COG1474 | 366 | CDC6 Cdc6-related protein, AAA superfamily ATPase | 84.24 | |
| PF09755 | 310 | DUF2046: Uncharacterized conserved protein H4 (DUF | 84.08 | |
| PRK14087 | 450 | dnaA chromosomal replication initiation protein; P | 84.04 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 83.98 | |
| PF06160 | 560 | EzrA: Septation ring formation regulator, EzrA ; I | 83.9 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 83.78 | |
| KOG0933 | 1174 | consensus Structural maintenance of chromosome pro | 83.44 | |
| TIGR03007 | 498 | pepcterm_ChnLen polysaccharide chain length determ | 82.89 | |
| KOG1655 | 218 | consensus Protein involved in vacuolar protein sor | 82.78 | |
| TIGR02680 | 1353 | conserved hypothetical protein TIGR02680. Members | 82.77 | |
| KOG0995 | 581 | consensus Centromere-associated protein HEC1 [Cell | 82.59 | |
| TIGR03185 | 650 | DNA_S_dndD DNA sulfur modification protein DndD. T | 82.47 | |
| COG3883 | 265 | Uncharacterized protein conserved in bacteria [Fun | 82.41 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 82.3 | |
| COG1340 | 294 | Uncharacterized archaeal coiled-coil protein [Func | 82.28 | |
| PF12718 | 143 | Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 | 82.03 | |
| PRK08903 | 227 | DnaA regulatory inactivator Hda; Validated | 82.02 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 82.0 | |
| PF10174 | 775 | Cast: RIM-binding protein of the cytomatrix active | 81.93 | |
| KOG1853 | 333 | consensus LIS1-interacting protein NUDE [Cytoskele | 81.71 | |
| COG3096 | 1480 | MukB Uncharacterized protein involved in chromosom | 81.67 | |
| PF03938 | 158 | OmpH: Outer membrane protein (OmpH-like); InterPro | 81.12 | |
| TIGR00634 | 563 | recN DNA repair protein RecN. All proteins in this | 80.93 | |
| PF15619 | 194 | Lebercilin: Ciliary protein causing Leber congenit | 80.91 | |
| PF14662 | 193 | CCDC155: Coiled-coil region of CCDC155 | 80.79 | |
| PF04111 | 314 | APG6: Autophagy protein Apg6; InterPro: IPR007243 | 80.79 | |
| KOG4360 | 596 | consensus Uncharacterized coiled coil protein [Fun | 80.7 | |
| KOG2129 | 552 | consensus Uncharacterized conserved protein H4 [Fu | 80.51 | |
| PRK10929 | 1109 | putative mechanosensitive channel protein; Provisi | 80.17 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 80.09 | |
| PF10146 | 230 | zf-C4H2: Zinc finger-containing protein ; InterPro | 80.01 |
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-91 Score=820.37 Aligned_cols=369 Identities=40% Similarity=0.640 Sum_probs=324.1
Q ss_pred CCCCCCCCCceEEEEEeCCCCCCcCC---CCeEEEeC-CcEEEEECCCCCchhhhhccccCCcceeeeeeecCCCCCcHH
Q 003511 5 SAPATKKSTTLTVAIKCRPLTEREQG---RDIVRVKH-DKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLD 80 (814)
Q Consensus 5 ~~p~~~~~~~IkV~VRvRPl~~~E~~---~~~v~v~~-~~~Vvv~dp~~~~~~~~~~~~~~~~k~F~FD~VF~~~atQee 80 (814)
+.+...++.+|+|+|||||++++|.. ..+|.+.+ .+.|.|-.. +.+..-.++|+||+||+|.+.|++
T Consensus 41 ~k~~~e~~~NIqVivRcRp~n~~E~~~~s~~VVs~~~~~kEV~v~~~---------~~sk~~~k~ftFDkVFGpes~Q~d 111 (1041)
T KOG0243|consen 41 SKDHKEKEVNIQVIVRCRPRNDRERKSKSSVVVSCDGIRKEVAVRQT---------IASKQIDKTFTFDKVFGPESQQED 111 (1041)
T ss_pred cCCCCCCCCceEEEEEeCCCCchhhhcCCCeEEecCCCcceEEEecc---------cccccccceeecceeeCcchhHHH
Confidence 34445677999999999999999963 23455555 445666432 122234789999999999999999
Q ss_pred HHHHHHhhhHhhhccCcceEEEeeccCCCCcceeecc--------CCCCCCchhhhHHHHHHHHhhcCCCCeEEEEEEEE
Q 003511 81 VYTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVG--------TKSDPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYL 152 (814)
Q Consensus 81 Vy~~~v~plV~~vl~GyN~tIfAYGqTGSGKTyTM~G--------~~~~~GIIpral~~LF~~i~~~~~~~~f~VsvSyl 152 (814)
||+.++.|+|..|+.|||||||||||||+||||||.| .+.++|||||++.+||+.+.... .+|.|+|||+
T Consensus 112 ~Y~~~v~p~i~eVl~GyNCTIFAYGQTGTGKTyTMeG~~~~~~g~l~~~aGIIPRal~~IFd~Le~~~--~EYsvKVSfL 189 (1041)
T KOG0243|consen 112 LYDQAVSPIIKEVLEGYNCTIFAYGQTGTGKTYTMEGGERKKNGELPSEAGIIPRALRQIFDTLEAQG--AEYSVKVSFL 189 (1041)
T ss_pred HHHHHHHHHHHHHhccCCceEEEecCCCCCceeeeecCcccccCCCCccCCcchHHHHHHHHHHHhcC--CeEEEEEEeh
Confidence 9999999999999999999999999999999999999 46678999999999999998754 7899999999
Q ss_pred EEecceeeecccccc---CcceeeecC-----CCCeeecCeEEEEecChHHHHHHHHhhhhcCCCccccCCCCCCCCeEE
Q 003511 153 EVYNEVIYDLLEKSS---AHLELREDP-----MHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAV 224 (814)
Q Consensus 153 EIYnE~I~DLL~~~~---~~L~ired~-----~~g~~V~gLtev~V~S~ee~~~lL~~G~~~R~~~~T~~N~~SSRSHaI 224 (814)
|+|||.|+|||++.. ..+.+.+++ ++|++|.||.++.|.++.|++.+|.+|.+.|++++|.||+.|||||+|
T Consensus 190 ELYNEEl~DLLa~~~~~~~~~~~k~~~~~~~~kggV~vkGlEEi~V~~A~ei~klLekGs~kRrtAaTl~N~~SSRSHsI 269 (1041)
T KOG0243|consen 190 ELYNEELTDLLASEDTSDKKLRIKDDSTIVDGKGGVIVKGLEEIIVTNADEIYKLLEKGSKKRRTAATLMNDQSSRSHSI 269 (1041)
T ss_pred hhhhHHHHHhcCCccccccccccccCCcccCCcCcEEEecceeeeecchhHHHHHHHhhhhHhHHHHHHhhhhccccceE
Confidence 999999999998653 345555554 789999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEEeccccC-CceeEEEEEEEEcCCCcccccccCcchhhHHHHHhhHhHHHHHHHHHHhcCCCCCCCcccccccc
Q 003511 225 LEITVKRRQKTEYC-NQVMRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNS 303 (814)
Q Consensus 225 ftI~V~~~~~~~~~-~~~~~SkL~fVDLAGSER~~~t~~~g~rlkE~~~INkSL~aLg~VI~aLs~~~k~~~~hIPYRdS 303 (814)
|+|+|..+..+..+ ..++.|||+||||||||..+.+|+.+.|.+|++.||+||++||+||+||.+.. .|||||+|
T Consensus 270 FsItvhike~t~~geelvK~GKLNLVDLAGSENI~RSGA~~~RArEAG~INqSLLTLGRVInALVe~s----~HIPYRES 345 (1041)
T KOG0243|consen 270 FSITVHIKENTPEGEELVKIGKLNLVDLAGSENISRSGARNGRAREAGEINQSLLTLGRVINALVEHS----GHIPYRES 345 (1041)
T ss_pred EEEEEEEecCCCcchhhHhhcccceeeccccccccccccccchhHHhhhhhHHHHHHHHHHHHHHccC----CCCCchHH
Confidence 99999888766543 34778999999999999999999999999999999999999999999999854 58999999
Q ss_pred hhhhhhcccCCCCcceeEEEeeCCCCCChHHHHHHHHHHHHHhhcccccccccccccccchHHHHHHHHHHHHHHHHHHH
Q 003511 304 KLTRILKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSIDTHVSDYQRMIDNLQIEVCRLKKE 383 (814)
Q Consensus 304 KLTrLLkdsLGGnskT~mIatISPs~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~~~~~~~~~~~~I~~L~~Ei~~Lk~e 383 (814)
||||||||||||.++|+|||||||+..+++||++||.||.|||+|+|+|.+|..- .-..+|++|-.||++||.+
T Consensus 346 KLTRLLQDSLGGkTKT~iIATiSPa~~~lEETlSTLEYA~RAKnIkNKPevNQkl------~K~~llKd~~~EIerLK~d 419 (1041)
T KOG0243|consen 346 KLTRLLQDSLGGKTKTCIIATISPAKHNLEETLSTLEYAHRAKNIKNKPEVNQKL------MKKTLLKDLYEEIERLKRD 419 (1041)
T ss_pred HHHHHHHHHhCCCceeEEEEEeCCCcccHHHHHHHHHHHHHhhhccCCCccchHH------HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999998421 2246899999999999999
Q ss_pred HhccCCCCCCC
Q 003511 384 LADKDSQPSVK 394 (814)
Q Consensus 384 L~~~~~~~~~~ 394 (814)
|...+....+.
T Consensus 420 l~AaReKnGvy 430 (1041)
T KOG0243|consen 420 LAAAREKNGVY 430 (1041)
T ss_pred HHHhHhhCceE
Confidence 98877654443
|
|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes | Back alignment and domain information |
|---|
| >PF09789 DUF2353: Uncharacterized coiled-coil protein (DUF2353); InterPro: IPR019179 Members of this family have been annotated as being coiled-coil domain-containing protein 149, however they currently have no known function | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type | Back alignment and domain information |
|---|
| >PRK11637 AmiB activator; Provisional | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >PRK03918 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT) | Back alignment and domain information |
|---|
| >PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PRK04863 mukB cell division protein MukB; Provisional | Back alignment and domain information |
|---|
| >PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins | Back alignment and domain information |
|---|
| >KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription] | Back alignment and domain information |
|---|
| >KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR03017 EpsF chain length determinant protein EpsF | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF15254 CCDC14: Coiled-coil domain-containing protein 14 | Back alignment and domain information |
|---|
| >KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure] | Back alignment and domain information |
|---|
| >TIGR01005 eps_transp_fam exopolysaccharide transport protein family | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >TIGR00606 rad50 rad50 | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0982 consensus Centrosomal protein Nuf [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >PHA02562 46 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5 | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK09039 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK02224 chromosome segregation protein; Provisional | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >KOG1937 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association [] | Back alignment and domain information |
|---|
| >PRK04778 septation ring formation regulator EzrA; Provisional | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) [] | Back alignment and domain information |
|---|
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PF13851 GAS: Growth-arrest specific micro-tubule binding | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK06835 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK11281 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain | Back alignment and domain information |
|---|
| >PRK14087 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
| >KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily | Back alignment and domain information |
|---|
| >KOG1655 consensus Protein involved in vacuolar protein sorting [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >TIGR02680 conserved hypothetical protein TIGR02680 | Back alignment and domain information |
|---|
| >KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
| >TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD | Back alignment and domain information |
|---|
| >COG3883 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown] | Back alignment and domain information |
|---|
| >PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells | Back alignment and domain information |
|---|
| >PRK08903 DnaA regulatory inactivator Hda; Validated | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion [] | Back alignment and domain information |
|---|
| >KOG1853 consensus LIS1-interacting protein NUDE [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG3096 MukB Uncharacterized protein involved in chromosome partitioning [Cell division and chromosome partitioning] | Back alignment and domain information |
|---|
| >PF03938 OmpH: Outer membrane protein (OmpH-like); InterPro: IPR005632 This entry includes outer membrane proteins such as OmpH (Skp) among others | Back alignment and domain information |
|---|
| >TIGR00634 recN DNA repair protein RecN | Back alignment and domain information |
|---|
| >PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease | Back alignment and domain information |
|---|
| >PF14662 CCDC155: Coiled-coil region of CCDC155 | Back alignment and domain information |
|---|
| >PF04111 APG6: Autophagy protein Apg6; InterPro: IPR007243 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells | Back alignment and domain information |
|---|
| >KOG4360 consensus Uncharacterized coiled coil protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown] | Back alignment and domain information |
|---|
| >PRK10929 putative mechanosensitive channel protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PF10146 zf-C4H2: Zinc finger-containing protein ; InterPro: IPR018482 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 814 | ||||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 5e-70 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 4e-64 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 3e-59 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 8e-59 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 8e-59 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 1e-58 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 1e-58 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 1e-58 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 1e-58 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-58 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 2e-58 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 3e-58 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 5e-58 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 4e-57 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 2e-56 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-55 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 3e-55 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 4e-54 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 5e-54 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 8e-54 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 2e-53 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 5e-52 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 1e-51 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 2e-51 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 6e-51 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 6e-51 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 7e-51 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 8e-51 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 2e-50 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 2e-50 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 8e-50 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 9e-50 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 2e-49 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 2e-49 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 6e-47 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 4e-46 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 2e-43 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 5e-43 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 4e-41 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 4e-41 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 5e-41 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 8e-41 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 1e-40 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 3e-40 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 4e-40 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 4e-40 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 8e-40 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-39 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 2e-39 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 3e-39 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 3e-38 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 6e-37 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 6e-35 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 1e-33 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 9e-33 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 9e-31 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 6e-12 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 8e-11 |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
|
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
Score = 465 bits (1200), Expect = e-159
Identities = 147/357 (41%), Positives = 208/357 (58%), Gaps = 16/357 (4%)
Query: 5 SAPATKKSTTLTVAIKCRPLTERE---QGRDIVRVKHDKEVVVLDPDFSKDYL------- 54
S + V ++ RP +E +V V DK ++V DP +
Sbjct: 2 SVTEEDLCHHMKVVVRVRPENTKEKAAGFHKVVHVV-DKHILVFDPKQEEVSFFHGKKTT 60
Query: 55 --DHIQNRTKEKNYCFDRAFGPGCTNLDVYTACISSVISGVVQGLNATVFAYGSTGSGKT 112
+ I+ + K+ + FD F T +V+ ++ + G N TV AYG+TG+GKT
Sbjct: 61 NQNVIKKQNKDLKFVFDAVFDETSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKT 120
Query: 113 YTMVGTKSDPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKSSAHLEL 172
+TM+G+ +PG+M L++ ++ + + K + SYLEVYNE I DLL S L +
Sbjct: 121 HTMLGSADEPGVMYLTMLHLYKCMDEIKEEKICSTAVSYLEVYNEQIRDLLVNSG-PLAV 179
Query: 173 REDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRR 232
RED G+VV GL + S+++IL LL+ GN R T+ N TSSRSHAV +I ++++
Sbjct: 180 REDTQKGVVVHGLTLHQPKSSEEILHLLDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQ 239
Query: 233 QKTEYCNQVMR-GKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQ 291
KT NQ +R K+SL+DLAGSERAS + + G + +G NINRSLLAL N INAL +
Sbjct: 240 DKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLLALGNVINALADSK 299
Query: 292 KKGLAYVPYRNSKLTRILKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKI 348
+K ++PYRNSKLTR+LKD L GN QT+M+A +SP Y T NTLKYA+RAK I
Sbjct: 300 RKN-QHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSVFYDDTYNTLKYANRAKDI 355
|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 814 | ||||
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 1e-76 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 1e-75 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 8e-75 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 4e-72 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 5e-72 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 1e-71 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 3e-67 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 3e-67 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 1e-61 |
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Neurospora crassa [TaxId: 5141]
Score = 250 bits (639), Expect = 1e-76
Identities = 120/375 (32%), Positives = 188/375 (50%), Gaps = 28/375 (7%)
Query: 9 TKKSTTLTVAIKCRPLTEREQ---GRDIVRVKHDKEVVVLDPDFSKDYLDHIQNRTKEKN 65
+ + ++ V + RP E G+ IV + V ++ + +
Sbjct: 1 SSSANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTV-------------DSKEAQGS 47
Query: 66 YCFDRAFGPGCTNLDVYTACISSVISGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPG-- 123
+ FDR F C D++ I + ++ G N TVFAYG TG+GK+YTM+GT D
Sbjct: 48 FTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSIDDPDG 107
Query: 124 --LMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKSSAHLELREDPMHGIV 181
++ + IF I + E+ V SY+E+Y E I DLL + +L + E+ G+
Sbjct: 108 RGVIPRIVEQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVY 167
Query: 182 VAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQV 241
V GL I V S ++ E++ G + R T N SSRSH++ IT+ ++
Sbjct: 168 VKGLLEIYVSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVET--GSA 225
Query: 242 MRGKLSLVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYR 301
G+L LVDLAGSE+ + + GQ L + IN+SL AL INAL + +VPYR
Sbjct: 226 KSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSS---HVPYR 282
Query: 302 NSKLTRILKDGLSGNSQTVMVATISPVDSQYHHTLNTLKYADRAKKIKTHIQKNIGSIDT 361
+SKLTRIL++ L GNS+T ++ SP TL+TL++ RAK IK + N +
Sbjct: 283 DSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVN---AEL 339
Query: 362 HVSDYQRMIDNLQIE 376
++ ++M+ + +
Sbjct: 340 SPAELKQMLAKAKTQ 354
|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 814 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 92.59 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 84.57 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 83.58 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=0 Score=636.59 Aligned_cols=345 Identities=34% Similarity=0.565 Sum_probs=310.4
Q ss_pred CEEEEEEECCCCCCCC---CCCEEEEECCCEEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 4399999189998758---9970899389579997999981011100136875013431003999870988999976668
Q 003511 14 TLTVAIKCRPLTEREQ---GRDIVRVKHDKEVVVLDPDFSKDYLDHIQNRTKEKNYCFDRAFGPGCTNLDVYTACISSVI 90 (814)
Q Consensus 14 ~IkV~VRvRPl~~~E~---~~~~V~v~~~~~Vvv~dp~~~~~~l~~~~~~~~~k~F~FD~VF~~~asQeeVy~~~v~plV 90 (814)
+|+|+|||||+.+.|. ...++.+.++..+...... ...+.|.||+||+++++|++||+. +.|+|
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~------------~~~~~f~FD~vf~~~~~q~~vy~~-v~~lv 67 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKD------------DKAKQHMYDRVFDGNATQDDVFED-TKYLV 67 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSS------------SSEEEEECSEEECTTCCHHHHHHT-TTHHH
T ss_pred CEEEEEECCCCCHHHCCCCCCCEEEECCCCEEEECCCC------------CCCEEEECCEECCCCCCHHHHHHH-HHHHH
T ss_conf 96999992789936622589875996799758735789------------985477788564999998999998-99999
Q ss_pred HHHCCCCCEEEEEECCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEECCCCCC---
Q ss_conf 65216864479941468999331522479999733403899998874158998199999999995645442345665---
Q 003511 91 SGVVQGLNATVFAYGSTGSGKTYTMVGTKSDPGLMVLSLHTIFDLIKKDKNSDEFEVSCSYLEVYNEVIYDLLEKSS--- 167 (814)
Q Consensus 91 ~~vl~G~N~tIfAYGqTGSGKTyTM~G~~~~~GIipral~~LF~~i~~~~~~~~f~VsvSylEIYnE~I~DLL~~~~--- 167 (814)
+++++|||+||||||||||||||||+|+..++||+||++.+||..+........|.|++||+|||||+|+|||++..
T Consensus 68 ~~~l~G~n~~i~aYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~ 147 (364)
T d1sdma_ 68 QSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKR 147 (364)
T ss_dssp HHHHTTCEEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCC
T ss_pred HHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 99966985035522347877620165676655136789999886553103465536999988872363223357654555
Q ss_pred CCCEEEECCCCCEEECCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEE
Q ss_conf 85204465999836448089993496799999995520378755557799898748999999998335567712488899
Q 003511 168 AHLELREDPMHGIVVAGLRCIKVHSADKILELLNLGNSRRKTENTEANGTSSRSHAVLEITVKRRQKTEYCNQVMRGKLS 247 (814)
Q Consensus 168 ~~l~ired~~~g~~V~gLtev~V~S~eei~~lL~~G~~~R~~~~T~~N~~SSRSHaIftI~V~~~~~~~~~~~~~~skL~ 247 (814)
..+.+++++.++++|.|++++.|.+.++++.+|..|.++|.+++|.+|..|||||+||+|.+.+..... .....++|+
T Consensus 148 ~~l~~~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~~--~~~~~~kl~ 225 (364)
T d1sdma_ 148 LKLDIKKDSKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQT--QAIARGKLS 225 (364)
T ss_dssp CCCEEEECTTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETTT--CCEEEEEEE
T ss_pred CCCCEEECCCCCCCCCCCEEEEECCHHHHHHHHHCCCEEECCCCCCCCCCCCCCCEEEEEEEEEECCCC--CEEEEEEEE
T ss_conf 443313314676020353000117788978986406600044534354103336359999999703676--503567998
Q ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECC
Q ss_conf 99768985422236764344888773374999999999825899999853455463011210035888862137973099
Q 003511 248 LVDLAGSERASEANSGGQKLRDGANINRSLLALANCINALGKPQKKGLAYVPYRNSKLTRILKDGLSGNSQTVMVATISP 327 (814)
Q Consensus 248 lVDLAGSER~~~t~~~g~rlkE~~~IN~SL~aLg~VI~aLs~~~~~~~~hIPYRdSKLTrLLkDsLGGnskT~mIatISP 327 (814)
|||||||||...+++.|.+++|+..||+||++|++||.+|+++. .||||||||||+||+|+|||||+|+||+||||
T Consensus 226 ~vDLAGsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~~----~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp 301 (364)
T d1sdma_ 226 FVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSGN----QHIPYRNHKLTMLMSDSLGGNAKTLMFVNISP 301 (364)
T ss_dssp EEECCCCSCCCC---------CCCTTCHHHHHHHHHHHHHHHTC----SCCCGGGCHHHHHTTTTTTSSSEEEEEEEECC
T ss_pred EECHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCC----CCCCCHHHHHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 40410035200146667502332335643206899999997499----75773011213887863499950999999698
Q ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 98776878999999999731001212345565621127999999999999999999850
Q 003511 328 VDSQYHHTLNTLKYADRAKKIKTHIQKNIGSIDTHVSDYQRMIDNLQIEVCRLKKELAD 386 (814)
Q Consensus 328 s~~~~eETlsTLrfA~Rak~Ikn~~~~N~~~~~~~~~~~~~~I~~L~~Ei~~Lk~eL~~ 386 (814)
+..+++||++||+||+||++|+|+|.+|+.. ..+..|+.++..|+.++..
T Consensus 302 ~~~~~~eTl~TL~fa~~ak~i~n~p~~n~~~---------~~~~~l~~~i~~l~~~~~~ 351 (364)
T d1sdma_ 302 AESNLDETHNSLTYASRVRSIVNDPSKNVSS---------KEVARLKKLVSYWKEQAGR 351 (364)
T ss_dssp BGGGHHHHHHHHHHHHHHTTCCCCCCCCEEC---------HHHHHHHTTTTCC------
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH---------HHHHHHHHHHHHHHHHHHH
T ss_conf 7001899999999999984206678355798---------9999999999999999874
|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|