Citrus Sinensis ID: 003606

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------81
MSRPFMSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
cccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccEEEccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccHHHHHHHccHHHHHHHHHccccEEEccccccccccccccHHHHHHHHHHccccEEEEccHHHHHHHHHcccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcEEEEEccccccccccccccEEEEEcccccccccccccccccccccccHHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHccEEEEEEEccccccccccccccccccHHHHHHHHHHHHcccccEEEEEEcccccccccHHHcccccEEEEcccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccHHHHHccccccccccccccccccccccccccccccccEEEEEEEEEEcccccccEEEEEEEEcccccccccccccccEEEEEEccccEEEEEEEEEcccccEEEcccccEEEccEEEEEEEcccccEEEEEEc
cccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHcccccccccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccEccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccccccEEcHHHHHHHccHHHHHHHHHcccEEEEHEHHccccccccccHHHHHHHHHHccccEEEEccHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHcccHHHHHHHHHHHHHHcEEEEEccccccccHccccEEEEEcccccccHHccccccccccccccHHHHHHHHHcccEEcccccccccccHHHHHHHHHHHHcccEEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEccccEEccHccccccccHEEEEcccccHHHHHHHHHHHccccccccccEEEccccccccccccccccccccccccccEEEEEcccEEEEcccccEEEEEEEEccEccccccccccHcHcccccccccccccccccHHcccccccccEEEEEEEEEEcccccccEEEEEEEccccccccccHHHHcccEEEEEccccEEEEEEEEccHHHHEEEcccccEEEccccEEEEEccccccEEEEcc
msrpfmsiQLRERILFRVLQLIVVVNVIAfsnskpvlnkpdfpckpphfdsypfcntslsISTRAKSLISLLTLQEKIQQLSDnasaiprlgipayewwseslhgiasngpgvnfngtvssvtSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGqagltfwapninifrdprwgrgqetpgedpmVVSAYAVEFVKSfqgenwksddggigfgFREKRVLkgfgeesdrgdELMLSACCKHLIAYDLekwgnfsrysfnamiteqdtedtfqppfrscieqgkascimcsynqvngvpaclrgDLFQKArnewgfkgyitsdcDAVATIFEYQNYTKTHEDSAAGVlkagmdincgtcmlrhtqsaidkgkvqEKDIDRALLNLFSVQLRlglfngdprkgkygklgpddvctsEHKKLALDAARQGIVLLkndkkflplnknavSSLAIIGPlvnnisqmgggytgipcspkslLRGLEAyvskthyasgchdvpcnsdagFHEAVRIAKKADFVIVVAGldltqetedrdrvslllpgqqmsLVTSVARTSKRPVILVltgggpldvsfaeadsqISSILWIGYPGEAGAKALAEIIfgdfnpggrlpmtwypesftkvpmndmnmradssrqypgrsyrfytgtqvygfghglsyTNYSYkflsapselTISASlkagsdknilqqtgsrldyvhidevtsctslrFHVQISvtnagdvdgsHVVMLFArvpkvsqgtpekqligfdrvhtvakgskeisfgvdpceqlsiankhgrrilplgnHVLMVGELRhsltiety
msrpfmsiQLRERILFRVLQLIVVVNVIAfsnskpvlnKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSfqgenwksddggigFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRlglfngdprkgkygkLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLdltqetedrdrvslllpgqqmslvtsvartskrPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPkvsqgtpekqligfDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGnhvlmvgelrhsltiety
MSRPFMSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
******SIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRG******DPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPL*************ILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKV****************GRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLK****KNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSL*****
*************ILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRAD****YPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTI**SLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRH*L*IETY
MSRPFMSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
******SIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGE****************************GDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTI******************RLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIE*Y
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSRPFMSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIETY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query808 2.2.26 [Sep-21-2011]
Q9LXA8792 Probable beta-D-xylosidas yes no 0.976 0.996 0.662 0.0
Q9SGZ5767 Probable beta-D-xylosidas no no 0.908 0.956 0.506 0.0
A5JTQ3774 Beta-xylosidase/alpha-L-a N/A no 0.902 0.941 0.472 0.0
Q9FLG1784 Beta-D-xylosidase 4 OS=Ar no no 0.928 0.956 0.470 0.0
Q9LJN4781 Probable beta-D-xylosidas no no 0.930 0.962 0.455 0.0
A5JTQ2774 Beta-xylosidase/alpha-L-a N/A no 0.902 0.941 0.479 0.0
Q9LXD6773 Beta-D-xylosidase 3 OS=Ar no no 0.939 0.981 0.465 0.0
Q94KD8768 Probable beta-D-xylosidas no no 0.933 0.981 0.447 0.0
Q9FGY1774 Beta-D-xylosidase 1 OS=Ar no no 0.926 0.967 0.453 0.0
A1DJS5771 Probable exo-1,4-beta-xyl N/A no 0.846 0.887 0.383 1e-129
>sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 Back     alignment and function desciption
 Score = 1104 bits (2856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 532/803 (66%), Positives = 631/803 (78%), Gaps = 14/803 (1%)

Query: 6   MSIQLRERILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRA 65
           M++QL       ++ L+   + IA    K + + P FPCKPPHF SYPFCN SLSI  RA
Sbjct: 1   MNLQLT------LISLLFFTSAIA-ETFKNLDSHPQFPCKPPHFSSYPFCNVSLSIKQRA 53

Query: 66  KSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSF 125
            SL+SLL L EKI QLS+ A+++PRLGIP YEWWSESLHG+A NGPGV+FNG++S+ TSF
Sbjct: 54  ISLVSLLMLPEKIGQLSNTAASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSF 113

Query: 126 PQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPG 185
           PQV+VSAASFNR+LW  IGSAVAVE RAMYN GQAGLTFWAPNIN+FRDPRWGRGQETPG
Sbjct: 114 PQVIVSAASFNRTLWYEIGSAVAVEGRAMYNGGQAGLTFWAPNINVFRDPRWGRGQETPG 173

Query: 186 EDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKH 245
           EDP VVS Y VEFV+ FQ E  K       F             + D   +LMLSACCKH
Sbjct: 174 EDPKVVSEYGVEFVRGFQ-EKKKRKVLKRRFSDDVDDDRH----DDDADGKLMLSACCKH 228

Query: 246 LIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACL 305
             AYDLEKWGNF+RY FNA++TEQD EDT+QPPF +CI  GKASC+MCSYN VNGVPAC 
Sbjct: 229 FTAYDLEKWGNFTRYDFNAVVTEQDMEDTYQPPFETCIRDGKASCLMCSYNAVNGVPACA 288

Query: 306 RGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLR 365
           +GDL QKAR EWGF+GYITSDCDAVATIF YQ YTK+ E++ A  +KAG+DINCGT MLR
Sbjct: 289 QGDLLQKARVEWGFEGYITSDCDAVATIFAYQGYTKSPEEAVADAIKAGVDINCGTYMLR 348

Query: 366 HTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLAL 425
           HTQSAI++GKV E+ +DRALLNLF+VQLRLGLF+GDPR+G+YGKLG +D+C+S+H+KLAL
Sbjct: 349 HTQSAIEQGKVSEELVDRALLNLFAVQLRLGLFDGDPRRGQYGKLGSNDICSSDHRKLAL 408

Query: 426 DAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEA 485
           +A RQGIVLLKND K LPLNKN VSSLAI+GP+ NNIS MGG YTG PC  K+L   L  
Sbjct: 409 EATRQGIVLLKNDHKLLPLNKNHVSSLAIVGPMANNISNMGGTYTGKPCQRKTLFTELLE 468

Query: 486 YVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQ 545
           YV KT YASGC DV C+SD GF EAV IAK ADFVIVVAGLDL+QETED+DRVSL LPG+
Sbjct: 469 YVKKTSYASGCSDVSCDSDTGFGEAVAIAKGADFVIVVAGLDLSQETEDKDRVSLSLPGK 528

Query: 546 QMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFG 605
           Q  LV+ VA  SK+PVILVLTGGGP+DV+FA+ D +I SI+WIGYPGE G +ALAEIIFG
Sbjct: 529 QKDLVSHVAAVSKKPVILVLTGGGPVDVTFAKNDPRIGSIIWIGYPGETGGQALAEIIFG 588

Query: 606 DFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNY 665
           DFNPGGRLP TWYPESFT V M+DM+MRA+SSR YPGR+YRFYTG QVY FG GLSYT +
Sbjct: 589 DFNPGGRLPTTWYPESFTDVAMSDMHMRANSSRGYPGRTYRFYTGPQVYSFGTGLSYTKF 648

Query: 666 SYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDE--VTSCTSLRFHVQISVTNA 723
            YK LSAP  L++S  L   S      Q G  L Y+ +D+  V SC SLRF+V++ V+N 
Sbjct: 649 EYKILSAPIRLSLSELLPQQSSHKKQLQHGEELRYLQLDDVIVNSCESLRFNVRVHVSNT 708

Query: 724 GDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHG 783
           G++DGSHVVMLF+++P V  G PEKQLIG+DRVH  +    E  F +DPC+QLS+AN  G
Sbjct: 709 GEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMMETVFVIDPCKQLSVANDVG 768

Query: 784 RRILPLGNHVLMVGELRHSLTIE 806
           +R++PLG+HVL +G+L+HSL++E
Sbjct: 769 KRVIPLGSHVLFLGDLQHSLSVE 791

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 Back     alignment and function description
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 Back     alignment and function description
>sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 Back     alignment and function description
>sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 Back     alignment and function description
>sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 Back     alignment and function description
>sp|A1DJS5|XYND_NEOFI Probable exo-1,4-beta-xylosidase xlnD OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query808
225469218789 PREDICTED: probable beta-D-xylosidase 6- 0.965 0.988 0.713 0.0
296084630768 unnamed protein product [Vitis vinifera] 0.943 0.992 0.700 0.0
224058158780 predicted protein [Populus trichocarpa] 0.939 0.973 0.723 0.0
357485313783 Beta-D-xylosidase [Medicago truncatula] 0.965 0.996 0.654 0.0
297811163796 glycosyl hydrolase family 3 protein [Ara 0.959 0.973 0.661 0.0
15238197792 putative beta-D-xylosidase 6 [Arabidopsi 0.976 0.996 0.662 0.0
449451581777 PREDICTED: probable beta-D-xylosidase 6- 0.954 0.992 0.630 0.0
449496501767 PREDICTED: probable beta-D-xylosidase 6- 0.936 0.986 0.639 0.0
356531391780 PREDICTED: probable beta-D-xylosidase 6- 0.923 0.956 0.658 0.0
26449574732 putative beta-xylosidase [Arabidopsis th 0.900 0.994 0.678 0.0
>gi|225469218|ref|XP_002264031.1| PREDICTED: probable beta-D-xylosidase 6-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1197 bits (3097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/797 (71%), Positives = 670/797 (84%), Gaps = 17/797 (2%)

Query: 13  RILFRVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLL 72
           R LF  L  + V+ + + S S      P FPC PP    YPFCNTSL ISTRA+SL+SLL
Sbjct: 6   RFLFICL-FLQVLPLFSISES----THPQFPCMPPTNSDYPFCNTSLPISTRAQSLVSLL 60

Query: 73  TLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSA 132
           TL EKIQQLSD A+AIPRL IPAYEWWSESLHGIA+NGPGV+FNGTVS+ TSFPQVL++A
Sbjct: 61  TLSEKIQQLSDEAAAIPRLYIPAYEWWSESLHGIATNGPGVSFNGTVSAATSFPQVLLTA 120

Query: 133 ASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVS 192
           ASFNRSLW +IGSA+AVEARAMYN+GQAGLTFWAPNINIFRDPRWGRGQETPGEDPMV S
Sbjct: 121 ASFNRSLWFSIGSAIAVEARAMYNVGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVAS 180

Query: 193 AYAVEFVKSFQGENWKSDD---GGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAY 249
           AYAVEFV+ FQG NWK  D   G +G    +KRVL+G   +SD GD LMLSACCKHL AY
Sbjct: 181 AYAVEFVRGFQGGNWKGGDEIRGAVG----KKRVLRG---DSD-GDGLMLSACCKHLTAY 232

Query: 250 DLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDL 309
           DLEKWGNFSRYSF+A+++ QD EDT+QPPFRSC++QGKASC+MCSYN+VNGVPAC R DL
Sbjct: 233 DLEKWGNFSRYSFDAVVSNQDLEDTYQPPFRSCVQQGKASCLMCSYNRVNGVPACARQDL 292

Query: 310 FQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQS 369
           FQKA+ EWGFKGYITSDCDAVAT++EYQ+Y  + ED+ A VLKAG DINCG+ MLRHTQS
Sbjct: 293 FQKAKTEWGFKGYITSDCDAVATVYEYQHYANSPEDAVADVLKAGTDINCGSYMLRHTQS 352

Query: 370 AIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAAR 429
           AID+GKV+E+DIDRAL NLFSVQ+RLGLF+GDP  G YG LGP DVCT EH+ LAL+AAR
Sbjct: 353 AIDQGKVKEEDIDRALFNLFSVQMRLGLFDGDPANGLYGNLGPKDVCTKEHRTLALEAAR 412

Query: 430 QGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSK 489
           QGIVLLKNDKKFLPL+K+ +SSLAIIGP  +    +GGGYTGIPC P+SL+ GL+ YV K
Sbjct: 413 QGIVLLKNDKKFLPLDKSRISSLAIIGPQADQ-PFLGGGYTGIPCKPESLVEGLKTYVEK 471

Query: 490 THYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSL 549
           T +A+GC DVPC SD GF EAV IA+KAD V+VVAGLDL+QETED DRVSLLLPG+QM+L
Sbjct: 472 TSFAAGCVDVPCLSDTGFDEAVSIARKADIVVVVAGLDLSQETEDHDRVSLLLPGKQMAL 531

Query: 550 VTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNP 609
           ++SVA   ++P++LVLTGGGPLDVSFAE D +I+SILWIGYPGEAGAKALAEIIFGDFNP
Sbjct: 532 ISSVASAIQKPLVLVLTGGGPLDVSFAEQDPRIASILWIGYPGEAGAKALAEIIFGDFNP 591

Query: 610 GGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKF 669
           GGRLPMTWYPESFT+VPMNDMNMRAD  R YPGR+YRFY G +VYGFG GLSYT ++Y+F
Sbjct: 592 GGRLPMTWYPESFTRVPMNDMNMRADPYRGYPGRTYRFYIGHRVYGFGQGLSYTKFAYQF 651

Query: 670 LSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGS 729
           +SAP++L +  S    S KN+ +Q    ++Y HI+E+ +C SLRFHV+ISVTN GD+DGS
Sbjct: 652 VSAPNKLNLLRSSDTVSSKNLPRQRREEVNYFHIEELDTCDSLRFHVEISVTNVGDMDGS 711

Query: 730 HVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPL 789
           HVVMLF+RVPK+ +GTPEKQLIGF RVHTV++ S E S  VDPCE  SIAN+ G+RI+PL
Sbjct: 712 HVVMLFSRVPKIVKGTPEKQLIGFSRVHTVSRRSTETSIMVDPCEHFSIANEQGKRIMPL 771

Query: 790 GNHVLMVGELRHSLTIE 806
           G+H +M+G++ HS+++E
Sbjct: 772 GDHTIMLGDVVHSVSVE 788

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296084630|emb|CBI25718.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224058158|ref|XP_002299457.1| predicted protein [Populus trichocarpa] gi|222846715|gb|EEE84262.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357485313|ref|XP_003612944.1| Beta-D-xylosidase [Medicago truncatula] gi|355514279|gb|AES95902.1| Beta-D-xylosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|297811163|ref|XP_002873465.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp. lyrata] gi|297319302|gb|EFH49724.1| glycosyl hydrolase family 3 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15238197|ref|NP_196618.1| putative beta-D-xylosidase 6 [Arabidopsis thaliana] gi|75264319|sp|Q9LXA8.1|BXL6_ARATH RecName: Full=Probable beta-D-xylosidase 6; Short=AtBXL6; Flags: Precursor gi|7671447|emb|CAB89387.1| beta-xylosidase-like protein [Arabidopsis thaliana] gi|15982753|gb|AAL09717.1| AT5g10560/F12B17_90 [Arabidopsis thaliana] gi|332004180|gb|AED91563.1| putative beta-D-xylosidase 6 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449451581|ref|XP_004143540.1| PREDICTED: probable beta-D-xylosidase 6-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449496501|ref|XP_004160150.1| PREDICTED: probable beta-D-xylosidase 6-like, partial [Cucumis sativus] Back     alignment and taxonomy information
>gi|356531391|ref|XP_003534261.1| PREDICTED: probable beta-D-xylosidase 6-like [Glycine max] Back     alignment and taxonomy information
>gi|26449574|dbj|BAC41913.1| putative beta-xylosidase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query808
TAIR|locus:2142434792 AT5G10560 [Arabidopsis thalian 0.957 0.977 0.667 1.8e-291
TAIR|locus:2029391767 AT1G78060 [Arabidopsis thalian 0.699 0.736 0.5 2.9e-207
TAIR|locus:2174809784 XYL4 "beta-D-xylosidase 4" [Ar 0.707 0.729 0.468 6.9e-195
TAIR|locus:2091236781 AT3G19620 [Arabidopsis thalian 0.696 0.720 0.457 3.8e-194
TAIR|locus:2144756773 BXL3 "AT5G09730" [Arabidopsis 0.707 0.739 0.464 1.5e-192
TAIR|locus:2196060768 BXL2 "beta-xylosidase 2" [Arab 0.696 0.733 0.446 1.7e-191
TAIR|locus:2157994774 BXL1 "beta-xylosidase 1" [Arab 0.696 0.727 0.452 3.5e-191
ASPGD|ASPL0000029139763 bxlB [Emericella nidulans (tax 0.539 0.571 0.379 1.9e-128
UNIPROTKB|Q5ATH9763 bxlB "Exo-1,4-beta-xylosidase 0.539 0.571 0.379 1.9e-128
ASPGD|ASPL0000048081803 xlnD [Emericella nidulans (tax 0.525 0.529 0.372 5e-108
TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2799 (990.4 bits), Expect = 1.8e-291, P = 1.8e-291
 Identities = 534/800 (66%), Positives = 638/800 (79%)

Query:    18 VLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEK 77
             ++ L+   + IA    K + + P FPCKPPHF SYPFCN SLSI  RA SL+SLL L EK
Sbjct:     7 LISLLFFTSAIA-ETFKNLDSHPQFPCKPPHFSSYPFCNVSLSIKQRAISLVSLLMLPEK 65

Query:    78 IQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNR 137
             I QLS+ A+++PRLGIP YEWWSESLHG+A NGPGV+FNG++S+ TSFPQV+VSAASFNR
Sbjct:    66 IGQLSNTAASVPRLGIPPYEWWSESLHGLADNGPGVSFNGSISAATSFPQVIVSAASFNR 125

Query:   138 SLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVE 197
             +LW  IGSAVAVE RAMYN GQAGLTFWAPNIN+FRDPRWGRGQETPGEDP VVS Y VE
Sbjct:   126 TLWYEIGSAVAVEGRAMYNGGQAGLTFWAPNINVFRDPRWGRGQETPGEDPKVVSEYGVE 185

Query:   198 FVKSFQGENWKSDDGGIGFGFREKRVLKG-FGEE--SDRGDE-----LMLSACCKHLIAY 249
             FV+ FQ +             ++++VLK  F ++   DR D+     LMLSACCKH  AY
Sbjct:   186 FVRGFQEK-------------KKRKVLKRRFSDDVDDDRHDDDADGKLMLSACCKHFTAY 232

Query:   250 DLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDL 309
             DLEKWGNF+RY FNA++TEQD EDT+QPPF +CI  GKASC+MCSYN VNGVPAC +GDL
Sbjct:   233 DLEKWGNFTRYDFNAVVTEQDMEDTYQPPFETCIRDGKASCLMCSYNAVNGVPACAQGDL 292

Query:   310 FQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQS 369
              QKAR EWGF+GYITSDCDAVATIF YQ YTK+ E++ A  +KAG+DINCGT MLRHTQS
Sbjct:   293 LQKARVEWGFEGYITSDCDAVATIFAYQGYTKSPEEAVADAIKAGVDINCGTYMLRHTQS 352

Query:   370 AIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAAR 429
             AI++GKV E+ +DRALLNLF+VQLRLGLF+GDPR+G+YGKLG +D+C+S+H+KLAL+A R
Sbjct:   353 AIEQGKVSEELVDRALLNLFAVQLRLGLFDGDPRRGQYGKLGSNDICSSDHRKLALEATR 412

Query:   430 QGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSK 489
             QGIVLLKND K LPLNKN VSSLAI+GP+ NNIS MGG YTG PC  K+L   L  YV K
Sbjct:   413 QGIVLLKNDHKLLPLNKNHVSSLAIVGPMANNISNMGGTYTGKPCQRKTLFTELLEYVKK 472

Query:   490 THYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSL 549
             T YASGC DV C+SD GF EAV IAK ADFVIVVAGLDL+QETED+DRVSL LPG+Q  L
Sbjct:   473 TSYASGCSDVSCDSDTGFGEAVAIAKGADFVIVVAGLDLSQETEDKDRVSLSLPGKQKDL 532

Query:   550 VTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNP 609
             V+ VA  SK+PVILVLTGGGP+DV+FA+ D +I SI+WIGYPGE G +ALAEIIFGDFNP
Sbjct:   533 VSHVAAVSKKPVILVLTGGGPVDVTFAKNDPRIGSIIWIGYPGETGGQALAEIIFGDFNP 592

Query:   610 GGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKF 669
             GGRLP TWYPESFT V M+DM+MRA+SSR YPGR+YRFYTG QVY FG GLSYT + YK 
Sbjct:   593 GGRLPTTWYPESFTDVAMSDMHMRANSSRGYPGRTYRFYTGPQVYSFGTGLSYTKFEYKI 652

Query:   670 LSAPSELTISASL-KAGSDKNILQQTGSRLDYVHIDEV--TSCTSLRFHVQISVTNAGDV 726
             LSAP  L++S  L +  S K  LQ  G  L Y+ +D+V   SC SLRF+V++ V+N G++
Sbjct:   653 LSAPIRLSLSELLPQQSSHKKQLQH-GEELRYLQLDDVIVNSCESLRFNVRVHVSNTGEI 711

Query:   727 DGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRI 786
             DGSHVVMLF+++P V  G PEKQLIG+DRVH  +    E  F +DPC+QLS+AN  G+R+
Sbjct:   712 DGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMMETVFVIDPCKQLSVANDVGKRV 771

Query:   787 LPLGNHVLMVGELRHSLTIE 806
             +PLG+HVL +G+L+HSL++E
Sbjct:   772 IPLGSHVLFLGDLQHSLSVE 791
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009044 "xylan 1,4-beta-xylosidase activity" evidence=TAS
GO:0005773 "vacuole" evidence=IDA
GO:0005774 "vacuolar membrane" evidence=IDA
TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029139 bxlB [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ATH9 bxlB "Exo-1,4-beta-xylosidase bxlB" [Aspergillus nidulans FGSC A4 (taxid:227321)] Back     alignment and assigned GO terms
ASPGD|ASPL0000048081 xlnD [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q4WFI6BXLB_ASPFU3, ., 2, ., 1, ., 3, 70.38310.86260.9040yesno
A2QA27XYND_ASPNC3, ., 2, ., 1, ., 3, 70.34950.87990.8843yesno
Q5ATH9BXLB_EMENI3, ., 2, ., 1, ., 3, 70.36380.86880.9200yesno
O00089XYND_ASPNG3, ., 2, ., 1, ., 3, 70.34950.87990.8843yesno
Q9LXA8BXL6_ARATH3, ., 2, ., 1, ., -0.66250.97640.9962yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.370.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00012513001
SubName- Full=Chromosome undetermined scaffold_388, whole genome shotgun sequence; (768 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query808
PLN03080779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 0.0
PRK15098765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 3e-79
pfam01915221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 9e-59
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 1e-53
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 3e-47
pfam1431071 pfam14310, Fn3-like, Fibronectin type III-like dom 4e-12
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information 
 Score = 1386 bits (3589), Expect = 0.0
 Identities = 553/793 (69%), Positives = 647/793 (81%), Gaps = 23/793 (2%)

Query: 17  RVLQLIVVVNVIAFSNSKPVLNKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQE 76
           R L L++ +  +  +      + P FPCKPP F +YPFCN SL I  RA+SL+SLLTL E
Sbjct: 6   RPLFLLLFLLALGATFKAADAH-PQFPCKPPTFSAYPFCNASLPIPARARSLVSLLTLDE 64

Query: 77  KIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFN-GTVSSVTSFPQVLVSAASF 135
           KI QLS+ A+ +PRLGIP YEWWSESLHG+A NGPGV+FN G VS+ TSFPQV++SAASF
Sbjct: 65  KIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGPGVSFNSGPVSAATSFPQVILSAASF 124

Query: 136 NRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYA 195
           NRSLW  IGSA+AVEARAMYN GQAGLTFWAPNINIFRDPRWGRGQETPGEDP V SAY+
Sbjct: 125 NRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVASAYS 184

Query: 196 VEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWG 255
           VEFVK FQG  WK                           +LMLSACCKH  AYDLEKWG
Sbjct: 185 VEFVKGFQGGKWKKVRD------------------DGEDGKLMLSACCKHYTAYDLEKWG 226

Query: 256 NFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARN 315
           NFSRY+FNA++TEQD EDT+QPPF+SCI++GKASC+MCSYNQVNGVPAC R DL QKAR+
Sbjct: 227 NFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQKARD 286

Query: 316 EWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTCMLRHTQSAIDKGK 375
           EWGF+GYITSDCDAVATIFEYQ YTK+ ED+ A VLKAGMDINCG+ MLRHTQSAI+KGK
Sbjct: 287 EWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADVLKAGMDINCGSYMLRHTQSAIEKGK 346

Query: 376 VQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLL 435
           VQE+DIDRAL NLFSVQLRLGLF+GDPR G YGKLGP++VCT EH++LAL+AARQGIVLL
Sbjct: 347 VQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLL 406

Query: 436 KNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASG 495
           KNDKKFLPLNK+ VSSLAIIGP+ N+   +GG YTG+PC P +L +GL+AYV KT +A+G
Sbjct: 407 KNDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAG 466

Query: 496 CHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVAR 555
           C DV CNSD GF EA+ IAK+ADFV+VVAGLDL+QETED DRVSLLLPG+QM L++SVA 
Sbjct: 467 CKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVAS 526

Query: 556 TSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPM 615
            SK+PV+LVLTGGGP+DVSFA+ D +I+SILWIGYPGE G +ALAEIIFGD+NPGGRLPM
Sbjct: 527 VSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEIIFGDYNPGGRLPM 586

Query: 616 TWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSE 675
           TWYPESFT VPM DMNMRAD SR YPGR+YRFYTG  VYGFG+GLSYT +SYK LSAP +
Sbjct: 587 TWYPESFTAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKK 646

Query: 676 LTISASL--KAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVM 733
           L++S S    + S K +LQ+    LDYV I+++ SC SLRF+V ISV+N G++DGSHVVM
Sbjct: 647 LSLSRSSVQDSISRKPLLQR-RDELDYVQIEDIASCESLRFNVHISVSNVGEMDGSHVVM 705

Query: 734 LFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHV 793
           LF+R P V  G PEKQL+GFDRVHT +  S E    VDPC+ LS+AN+ G+R+LPLG+HV
Sbjct: 706 LFSRSPPVVPGVPEKQLVGFDRVHTASGRSTETEIVVDPCKHLSVANEEGKRVLPLGDHV 765

Query: 794 LMVGELRHSLTIE 806
           LM+G+L HSL+IE
Sbjct: 766 LMLGDLEHSLSIE 778

Length = 779
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|222669 pfam14310, Fn3-like, Fibronectin type III-like domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 808
PLN03080779 Probable beta-xylosidase; Provisional 100.0
PRK15098765 beta-D-glucoside glucohydrolase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 100.0
PF01915227 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter 100.0
PF1431071 Fn3-like: Fibronectin type III-like domain; PDB: 3 99.79
PF07705101 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic 95.71
PF1063378 NPCBM_assoc: NPCBM-associated, NEW3 domain of alph 94.4
PF1269082 BsuPI: Intracellular proteinase inhibitor; InterPr 92.38
PF14874102 PapD-like: Flagellar-associated PapD-like 86.64
COG0486454 ThdF Predicted GTPase [General function prediction 84.36
>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.4e-167  Score=1487.10  Aligned_cols=750  Identities=73%  Similarity=1.253  Sum_probs=654.5

Q ss_pred             CCCCCCCCCCCCCCCCccCCCCCHHHHHHHHHhcCCHHHHHHhhcCCCCCCCCCCCCcchhhccccccccccCCccccc-
Q 003606           38 NKPDFPCKPPHFDSYPFCNTSLSISTRAKSLISLLTLQEKIQQLSDNASAIPRLGIPAYEWWSESLHGIASNGPGVNFN-  116 (808)
Q Consensus        38 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ll~~mtleEKv~ql~~~~~~~~rlgip~~~~~~~~~~gi~~~~~g~~~~-  116 (808)
                      ..++|+|++++...+||||++++.++|+++||++||||||++||.+.+.+++|||||.+.||+|++||++..++|+++. 
T Consensus        26 ~~~~~~c~~~~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~~~~~d~~hGv~~~~~g~~~~~  105 (779)
T PLN03080         26 AHPQFPCKPPTFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGPGVSFNS  105 (779)
T ss_pred             CCCCcCCCCccccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCccceecccccccccCCCcccccc
Confidence            3578999987778899999999999999999999999999999999899999999999999999999998888888775 


Q ss_pred             CCCCccCcCchHHHHHhhcCHHHHHHHHHHHHHHHHHhhccCCCCceeeccccccCCCCCCCCCCCCCCCChHHHHHHHH
Q 003606          117 GTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAV  196 (808)
Q Consensus       117 ~~~~~~t~fP~~~~laAt~d~~l~~~~g~~~~~E~ra~~~~g~~g~~~laP~~di~r~p~~gr~~esfgeDP~l~~~~a~  196 (808)
                      +.+..+|.||++|++|||||++|++++|+++|+|+|+++|.|..|+++|+|++||.|||||||++|||||||+|+++|+.
T Consensus       106 g~~~~aT~FP~~i~laAt~d~~L~~~~g~~ig~E~ra~g~~~~~G~~~~aP~vdi~rdPrwGR~~EtfGEDP~lv~~~a~  185 (779)
T PLN03080        106 GPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVASAYSV  185 (779)
T ss_pred             CCCCCceECchHHhhhhcCCHHHHHHHHHHHHHHHHhhccccccCcceeecccccccCCCcCccccCcCCCHHHHHHHHH
Confidence            33457899999999999999999999999999999999776655777899999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeeeccccccCccccCCccceecccccCHhHHhhccC
Q 003606          197 EFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQ  276 (808)
Q Consensus       197 a~v~Glq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~v~a~~KHF~g~~~~~~~~~~r~~~~~~~~~~~l~e~~l  276 (808)
                      |||+|||+.+...  .            |.   +. ..++.+|+||+||||||+++.+.++.|..+++.+++++|+|+||
T Consensus       186 a~V~GlQ~~~~~~--~------------~~---~~-~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L~e~yl  247 (779)
T PLN03080        186 EFVKGFQGGKWKK--V------------RD---DG-EDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQ  247 (779)
T ss_pred             HHHHHhcCCCccc--c------------cc---cc-cCCCceEEEECCeeeCCCccccCCccccCccCccCHHHHHhhhh
Confidence            9999999852100  0            00   00 01133499999999999999877788998999999999999999


Q ss_pred             hhHHHHHHcCCcceEEeecCccCCcccccCHHHHHHHHhhcCCCeEEEcchhhHhhhhhccccCCCHHHHHHHHHHcCCC
Q 003606          277 PPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKAGMD  356 (808)
Q Consensus       277 ~PF~~~i~~g~~~~vM~sy~~vng~pa~~s~~ll~~LR~e~gf~G~VvSD~~~~~~~~~~~~~~~~~~~a~~~al~AG~D  356 (808)
                      +||++||++|.+++||||||++||+|||.|++||++||+||||+|+|||||++|..+...|+++.+.+|++++||+||+|
T Consensus       248 ~PF~~ai~~g~~~~VM~sYn~vnG~Pa~~s~~lL~~LR~ewGF~G~VvSD~~a~~~~~~~~~~~~~~~ea~~~Al~AG~D  327 (779)
T PLN03080        248 PPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQKARDEWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADVLKAGMD  327 (779)
T ss_pred             HHHHHHHHhcCCeEEEeCCcCcCCccccCCHHHHHHHHHHhCcCCeEecchHHHHHhhhcccccCCHHHHHHHHHHcCCC
Confidence            99999999998879999999999999999999997799999999999999999999998888888899999999999999


Q ss_pred             ccCCccchHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhhhhhhc
Q 003606          357 INCGTCMLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLK  436 (808)
Q Consensus       357 ~~~~~~~~~~l~~av~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~v~~~~h~~lA~eaA~eSiVLLK  436 (808)
                      |+|+..+.+.|.+||++|+|++++||+||+|||++|+++|+|+.+|...+|.++....+++++|+++|+|+|++||||||
T Consensus       328 l~~~~~~~~~l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~~h~~lA~eaA~~siVLLK  407 (779)
T PLN03080        328 INCGSYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLK  407 (779)
T ss_pred             cccCchhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCHHHHHHHHHHHHhCEEEEe
Confidence            99988778899999999999999999999999999999999995443344555556778899999999999999999999


Q ss_pred             cCCCcccCcCCCCCeEEEEccccccccccCCCcccCCCCcccHHHHHHhhhcceEEecCCCCCCCCCcccHHHHHHHhhc
Q 003606          437 NDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKK  516 (808)
Q Consensus       437 N~~~~LPL~~~~~~kIaViGp~a~~~~~~~G~~sg~~~~~~t~l~gl~~~~~~v~y~~g~~~~~~~~~~~~~~a~~~a~~  516 (808)
                      |++++|||++.+.+||+||||+|+....++|+|++.+++.+|++++|+++..++.|..||....+.+...+++|+++|++
T Consensus       408 N~~~~LPL~~~~~~~IaViGp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~A~~~A~~  487 (779)
T PLN03080        408 NDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKR  487 (779)
T ss_pred             cCCCCCCCCCCCCCEEEEECCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcceeccCccccccCchhhHHHHHHHhcc
Confidence            99999999976567999999999998888899999889999999999998877889999875554445678999999999


Q ss_pred             CCEEEEEEecCCCCccccCCCCCCCCChhhHHHHHHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEecCCChhhH
Q 003606          517 ADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGA  596 (808)
Q Consensus       517 aD~vIv~vG~~~~~e~Eg~Dr~~l~Lp~~q~~LI~~v~~~~~kpvVVVl~~g~P~~l~~~~~~~~v~AIL~a~~pG~e~g  596 (808)
                      ||+|||++|.+...++|+.||.+|.||+.|.+||++|++++++|||||+++|+|++|+|+.+.++++||||+|||||++|
T Consensus       488 aD~vIv~~G~~~~~e~E~~Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv~l~~~~~~~~v~AIl~~~ypGqegG  567 (779)
T PLN03080        488 ADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGG  567 (779)
T ss_pred             CCEEEEEeCCCccccccCCCcccccCCccHHHHHHHHHhhcCCCEEEEEeCCceeeccchhccCCCCeEEEccCCcccch
Confidence            99999999999889999999999999999999999999875678999999999999999876678999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCceeCCCCCCCCCCCCCCcCcCCCCCCCCCcccccCCCcceecccccCCCCcccccccCcccc
Q 003606          597 KALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKFLSAPSEL  676 (808)
Q Consensus       597 ~AiAdVL~G~~nPsGkLPvT~~p~~~~~~p~~~~~~~~~~~~~~~g~~Yr~~~~~~lypFGyGLSYTtF~ys~l~~~~~~  676 (808)
                      +|+||||||++|||||||+||||+++.++|+++++++++...+|||++||||+.+|+||||||||||||+|+++++++..
T Consensus       568 ~AiAdvLfG~vnPsGkLPvT~~p~~~~~~P~~~~~~~~~~~~~~pg~~Yr~~~~~p~ypFG~GLSYTtF~ys~~~~~~~~  647 (779)
T PLN03080        568 QALAEIIFGDYNPGGRLPMTWYPESFTAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKKL  647 (779)
T ss_pred             hhhHHHHcCCCCCCCcCeeeecccccccCCccccCcccccccCCCCCCceeCCCCcceeccCCCccceeEeccccccccc
Confidence            99999999999999999999999989999999888877666678999999999999999999999999999998754322


Q ss_pred             ccccccccCCCccccccc-C-CCC-cccccccccccccceEEEEEEEEeCCCCCcceeEEEEEecCCCCCCCchhhhccc
Q 003606          677 TISASLKAGSDKNILQQT-G-SRL-DYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGF  753 (808)
Q Consensus       677 ~~~~~~~~~~~~~~~~~~-~-~~~-~~~~~~~~~~~~~~~~~vsv~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF  753 (808)
                      ++.........  ..+.. . ... ...++.+...|++..++|+|+|||||+++|+||||||+++|.++..+|.|+|+||
T Consensus       648 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQlYv~~p~~~~~~P~k~L~gF  725 (779)
T PLN03080        648 SLSRSSVQDSI--SRKPLLQRRDELDYVQIEDIASCESLRFNVHISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGF  725 (779)
T ss_pred             ccccccccccc--ccccccccccccccccccccccCCCceEEEEEEEEECCcccCcEEEEEEEecCccCCCCcchhccCc
Confidence            22100000000  00000 0 000 0000000012333369999999999999999999999999988778999999999


Q ss_pred             cccccCCCCEEEEEEEeCCCCCceeEcCCCCEEecCeeEEEEEecCCceEEEEe
Q 003606          754 DRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGELRHSLTIET  807 (808)
Q Consensus       754 ~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~~s~~~~~~~  807 (808)
                      +||+|+||||++|+|+|+++++|++||++++|++|+|+|+|+||+++|+++|++
T Consensus       726 ~kv~L~~Ges~~V~~~l~~~~~ls~~d~~~~~~v~~G~y~l~vG~~~~~~~~~~  779 (779)
T PLN03080        726 DRVHTASGRSTETEIVVDPCKHLSVANEEGKRVLPLGDHVLMLGDLEHSLSIEI  779 (779)
T ss_pred             EeEeeCCCCEEEEEEEeCchHHceEEcCCCcEEEeCccEEEEEeCCccceEEeC
Confidence            999999999999999999756899999999999999999999999999999985

>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information
>PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 Back     alignment and domain information
>PF14310 Fn3-like: Fibronectin type III-like domain; PDB: 3ABZ_D 3AC0_D 2X40_A 2X41_A 2X42_A Back     alignment and domain information
>PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins Back     alignment and domain information
>PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known Back     alignment and domain information
>PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo Back     alignment and domain information
>PF14874 PapD-like: Flagellar-associated PapD-like Back     alignment and domain information
>COG0486 ThdF Predicted GTPase [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query808
2x40_A721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 8e-38
2x42_A721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 6e-37
1ex1_A605 Beta-D-Glucan Exohydrolase From Barley Length = 605 4e-31
1lq2_A602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 5e-31
4i8d_A714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 2e-29
3zyz_A713 Crystal Structure Of A Glycoside Hydrolase Family 3 2e-29
3rrx_A822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 1e-25
3usz_A822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 1e-25
4i3g_A829 Crystal Structure Of Desr, A Beta-glucosidase From 4e-24
4i3g_A829 Crystal Structure Of Desr, A Beta-glucosidase From 2e-15
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 1e-21
3ac0_A845 Crystal Structure Of Beta-Glucosidase From Kluyvero 1e-15
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 4e-19
3abz_A845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 2e-15
3bmx_A642 Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis 2e-05
3lk6_A616 Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) Fro 9e-05
4gyj_A648 Crystal Structure Of Mutant (D318n) Bacillus Subtil 9e-05
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure 
Iteration: 1

 Score =  155 bits (392), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 190/787 (24%), Positives = 312/787 (39%), Gaps = 206/787 (26%)
Query: 64  RAKSLISLLTLQEKIQQL-------------------SDNASAIPRLGIPAYEWWSESLH 104
           +   ++S LTL+EK++ +                   +     +PR+G+PA+        
Sbjct: 3   KVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-------- 54
Query: 105 GIASNGP-GVNFNGTVSS------VTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNL 157
            + ++GP G+  N T  +       T+FP  ++ A+++NR L   +G A+  E R  Y +
Sbjct: 55  -VLADGPAGLRINPTRENDENTYYTTAFPVEIMLASTWNRELLEEVGKAMGEEVRE-YGV 112
Query: 158 GQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFG 217
                   AP +NI R+P  GR  E   EDP++    A  FVK  Q +       G+G  
Sbjct: 113 D----VLLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-------GVG-- 159
Query: 218 FREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQP 277
                                  AC KH +A + E     +R   + +++E+   + +  
Sbjct: 160 -----------------------ACIKHFVANNQET----NRMVVDTIVSERALREIYLR 192
Query: 278 PFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKA-RNEWGFKGYITSDCDAVATIFEY 336
            F   +++ K   +M +YN++NG        L +K  R EWGF+G++ SD  A       
Sbjct: 193 GFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYA------- 245
Query: 337 QNYTKTHEDSAAGVLKAGMD-INCGTCMLRHTQ---------SAIDKGKVQEKDIDRALL 386
                   D+    LKAG D I  G     +T+          A+ +GK+ E+ +D  + 
Sbjct: 246 -------GDNPVEQLKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVR 298
Query: 387 NLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNK 446
           N+  V     L N    K       PD     +H K+A +A  +G+VLL+N++  LPL++
Sbjct: 299 NILKV-----LVNAPSFKNYRYSNKPD---LEKHAKVAYEAGAEGVVLLRNEEA-LPLSE 349
Query: 447 NAVSSLAIIGPLVNNISQMGGGYTGIPCSPK---SLLRGL---------------EAYVS 488
           N  S +A+ G     I  + GG       P+   S+L G+               E Y+ 
Sbjct: 350 N--SKIALFG--TGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIK 405
Query: 489 KTHYASGCH------------DVPCN--SDAGFHEAVRIAKKADFVIVVAGLDLTQETED 534
           K                     +P N  S+   H   ++AKK D  ++V    ++ E  D
Sbjct: 406 KMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIH---KLAKKNDVAVIVIS-RISGEGYD 461
Query: 535 RDRVS--LLLPGQQMSLVTSVAR---TSKRPVILVLTGGGPLDVSFAEADSQISSILWIG 589
           R  V     L   +  L+ +V+R      + VI++L  G P++V        +  IL + 
Sbjct: 462 RKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEV--VSWRDLVDGILLVW 519
Query: 590 YPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQ--------YP 641
             G+   + +A+++ G  NP G+LP T +P  ++ VP          + Q        Y 
Sbjct: 520 QAGQETGRIVADVLTGRINPSGKLPTT-FPRDYSDVPSWTFPGEPKDNPQKVVYEEDIYV 578
Query: 642 GRSYRFYTGTQV---YGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRL 698
           G  YR+Y    V   Y FG+GLSYT + Y                  SD N+        
Sbjct: 579 G--YRYYDTFGVEPAYEFGYGLSYTTFEY------------------SDLNV-------- 610
Query: 699 DYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHT 758
                    S       VQ  + N G   G  V  ++ + PK     P ++L  F +   
Sbjct: 611 ---------SFDGETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRL 661
Query: 759 VAKGSKE 765
           +  G  E
Sbjct: 662 LNPGESE 668
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 Back     alignment and structure
>pdb|3LK6|A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis Length = 616 Back     alignment and structure
>pdb|4GYJ|A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) Length = 648 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query808
2x41_A721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 1e-153
3rrx_A822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 1e-132
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 1e-125
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 3e-87
3abz_A845 Beta-glucosidase I; glycoside hydrolase family3 be 6e-50
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 8e-35
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 6e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 2e-06
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 4e-04
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
 Score =  464 bits (1197), Expect = e-153
 Identities = 179/826 (21%), Positives = 305/826 (36%), Gaps = 199/826 (24%)

Query: 64  RAKSLISLLTLQEKIQQLS-------------------DNASAIPRLGIPAYEWWSESLH 104
           +   ++S LTL+EK++ +                         +PR+G+PA+   ++   
Sbjct: 3   KVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPA 61

Query: 105 GIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLT- 163
           G+  N    N   T    T+FP  ++ A+++NR L   +G A+  E R        G+  
Sbjct: 62  GLRINPTRENDENTYY-TTAFPVEIMLASTWNRELLEEVGKAMGEEVREY------GVDV 114

Query: 164 FWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRV 223
             AP +NI R+P  GR  E   EDP++    A  FVK  Q +       G+G        
Sbjct: 115 LLAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ-------GVG-------- 159

Query: 224 LKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCI 283
                            AC KH +A + E      R   + +++E+   + +   F   +
Sbjct: 160 -----------------ACIKHFVANNQETN----RMVVDTIVSERALREIYLRGFEIAV 198

Query: 284 EQGKASCIMCSYNQVNGVPAC-----LRGDLFQKARNEWGFKGYITSDCDAVATIFEYQN 338
           ++ K   +M +YN++NG         L+  L    R EWGF+G++ SD  A         
Sbjct: 199 KKSKPWSVMSAYNKLNGKYCSQNEWLLKKVL----REEWGFEGFVMSDWYAG-------- 246

Query: 339 YTKTHEDSAAGVLKAGMDI----------NCGTCMLRHTQSAIDKGKVQEKDIDRALLNL 388
                       LKAG D+                +     A+ +GK+ E+ +D  + N+
Sbjct: 247 ----DNPVEQ--LKAGNDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNI 300

Query: 389 FSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNA 448
             V +    F       K            +H K+A +A  +G+VLL+N++  LPL++N+
Sbjct: 301 LKVLVNAPSFKNYRYSNKPD--------LEKHAKVAYEAGAEGVVLLRNEE-ALPLSENS 351

Query: 449 VSSLAIIGPLVNNISQMGGGY-TGIPCSPKSLLRGLEAYVSKTH--YASGCHD------- 498
              +A+ G       + G G     P    S+L G++          A    D       
Sbjct: 352 --KIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRE 409

Query: 499 -----------------VPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVS-- 539
                                +     E  ++AKK D  ++V         E  DR    
Sbjct: 410 TEEYKPRRDSWGTIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVK 466

Query: 540 --LLLPGQQMSLVTSVARTSKR---PVILVLTGGGPLDVSFAEADSQISSILWIGYPGEA 594
               L   +  L+ +V+R        VI++L  G P++V        +  IL +   G+ 
Sbjct: 467 GDFYLSDDETDLIKTVSREFHEQGKKVIVLLNIGSPVEV--VSWRDLVDGILLVWQAGQE 524

Query: 595 GAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRS------YRFY 648
             + +A+++ G  NP G+LP T+ P  ++ VP          + Q           YR+Y
Sbjct: 525 TGRIVADVLTGRINPSGKLPTTF-PRDYSDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYY 583

Query: 649 TGTQV---YGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDE 705
               V   Y FG+GLSYT + Y      S+L +S                        + 
Sbjct: 584 DTFGVEPAYEFGYGLSYTTFEY------SDLNVSFD---------------------GET 616

Query: 706 VTSCTSLRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKG-SK 764
           +         VQ  + N G   G  V  ++ + PK     P ++L  F +   +  G S+
Sbjct: 617 LR--------VQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESE 668

Query: 765 EISFGVDPCEQLSIANKHGRRILPLGNHVLMVG----ELRHSLTIE 806
           E+   +     L+  N     +   G + + VG     ++   T  
Sbjct: 669 EVVLEIPV-RDLASFNGEEWVVEA-GEYEVRVGASSRNIKLKGTFS 712
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 808
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 4e-44
d1x38a2214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 1e-28
d1tr9a_330 c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol 2e-05
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  162 bits (409), Expect = 4e-44
 Identities = 86/415 (20%), Positives = 152/415 (36%), Gaps = 65/415 (15%)

Query: 52  YP-FCNTSLSISTRAKSLISLLTLQEKIQQLS---------------------DNASAIP 89
           Y  + + +  +  R   L+  +TL EKI Q++                         ++P
Sbjct: 2   YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVP 61

Query: 90  RLGIPAYEWWS----------ESLHGIAS--NGPGVNFNGTVSSVTSFPQVLVSAASFNR 137
           R G  A EW             +  GI        V+    V   T FP  +   A+ + 
Sbjct: 62  RKGATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDP 121

Query: 138 SLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVE 197
            L   IG A A+E RA           +AP I + RDPRWGR  E+  ED  +V +   E
Sbjct: 122 YLVKRIGEATALEVRATGIQ-----YAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMT-E 175

Query: 198 FVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNF 257
            +   QG+  K    G+ F   + +V                +AC KH +       G  
Sbjct: 176 LIPGLQGDVPKDFTSGMPFVAGKNKV----------------AACAKHFVGDGGTVDG-- 217

Query: 258 SRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQKARNEW 317
                N +I  +   +   P +++ +++G ++ ++   +         +  +    ++  
Sbjct: 218 -INENNTIINREGLMNIHMPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTL 276

Query: 318 GFKGYITSDCDAVATIFEYQNYTKTHEDSAA--GVLKAGMDINCGTCMLRHTQSAIDKGK 375
            FKG++ SD + +  I        ++   A+    L   M  N     +      ++ G 
Sbjct: 277 KFKGFVISDWEGIDRITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGV 336

Query: 376 VQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQ 430
           +    ID A+  +  V+  +GLF              + +   EH+ LA +AAR+
Sbjct: 337 IPMSRIDDAVTRILRVKFTMGLFENPYADPAM----AEQLGKQEHRDLAREAARK 387
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query808
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 100.0
d1x38a2214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 100.0
d1w8oa1103 Sialidase, "linker" domain {Micromonospora viridif 96.36
d2q3za2114 Transglutaminase, two C-terminal domains {Human (H 88.5
d1ex0a2112 Transglutaminase, two C-terminal domains {Human (H 83.21
d1vjja2115 Transglutaminase, two C-terminal domains {Human (H 80.29
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=0  Score=552.21  Aligned_cols=336  Identities=27%  Similarity=0.462  Sum_probs=273.3

Q ss_pred             CC-CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCC---------------------CCCCCCC------------------
Q ss_conf             98-6699999999999999218999999833188---------------------8888878------------------
Q 003606           52 YP-FCNTSLSISTRAKSLISLLTLQEKIQQLSDN---------------------ASAIPRL------------------   91 (808)
Q Consensus        52 ~p-~~~~~~~~~~rv~~ll~~mtleEKv~ql~~~---------------------~~~~~~~------------------   91 (808)
                      +| |+||++|+++||++|+++||||||||||++.                     ...++++                  
T Consensus         2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~   81 (388)
T d1x38a1           2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKAC   81 (388)
T ss_dssp             CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf             98768899999999999998779999996130644456887889852566166368766678989999999999999998


Q ss_pred             -----CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEE-E
Q ss_conf             -----9784021112334200369962136777766768368899850599999999999999999853047777313-4
Q 003606           92 -----GIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTF-W  165 (808)
Q Consensus        92 -----gip~~~~~~~~~~gi~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~~~E~ra~~~~g~~g~~~-l  165 (808)
                           |||.+ +..|..+|+..          ....|.||+++++|||||+++++++|+++|+|+|++      |+|+ |
T Consensus        82 ~~~~~giPll-i~~D~e~G~~~----------~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~------Gin~~~  144 (388)
T d1x38a1          82 MSTRLGIPMI-YGIDAVHGQNN----------VYGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT------GIQYAF  144 (388)
T ss_dssp             HTSSSCCCCE-EEECCSSSSTT----------STTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT------TCCEEC
T ss_pred             HHCCCCCCCE-EECCCCCCCCC----------CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHC------CCCCCC
T ss_conf             7436898836-63365567523----------566421003331102589799999999865788744------876336


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECC
Q ss_conf             51133479999987788889996999999999972304898898999877554321020257888889895302123325
Q 003606          166 APNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKH  245 (808)
Q Consensus       166 aP~~di~r~p~~gr~~esfgeDp~l~~~~a~a~v~Glq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~v~a~~KH  245 (808)
                      ||++||.|+|+|||++|+|||||++++.|+. +|.++|+.....             ++++.-.+.   ...+|++|+||
T Consensus       145 aPv~Dv~~~p~~gr~~et~geDp~l~~~~~~-~v~~~~g~~~~~-------------~~~G~~~~~---~~~gV~a~~KH  207 (388)
T d1x38a1         145 APCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKD-------------FTSGMPFVA---GKNKVAACAKH  207 (388)
T ss_dssp             CCBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTT-------------CCTTCCCCC---STTSCBCEEEE
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHHCHHHHH-------------HCCCCCCCC---CCCCCCEEEEE
T ss_conf             7763534564446556676678899999886-536641101354-------------301222234---55674213314


Q ss_pred             CCCCCCCCCCCCCCEECCCCCCHHHHHHCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH-HHHHCCCCEEEE
Q ss_conf             6555765568864200144469767860058258999880996268952576599035469999999-985509981999
Q 003606          246 LIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQK-ARNEWGFKGYIT  324 (808)
Q Consensus       246 Fpg~~~~~~~~~~r~~~~~~~~~~~l~~~~l~pF~~~i~~g~~~~VM~sy~~v~g~pa~~s~~ll~~-LR~~~gf~G~V~  324 (808)
                      |||||....+   +...++.+++++|+++||+||+.+|++|.. +|||+|+.+||+|+|.|++++++ ||++|||+|+||
T Consensus       208 FpG~g~~~~~---~~~~~~~i~~~~l~~~~l~pf~~~i~~g~~-~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~Vv  283 (388)
T d1x38a1         208 FVGDGGTVDG---INENNTIINREGLMNIHMPAYKNAMDKGVS-TVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVI  283 (388)
T ss_dssp             ETTGGGCGGG---CTTCEECCCHHHHHHHTSHHHHHHHHTTCC-EEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEE
T ss_pred             EECCCCCCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
T ss_conf             4368866467---403345304888998861455777760565-122342235775665799999999873059975242


Q ss_pred             CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCC----CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             26056764211234479978999999982999038843----16999999982886688899999999999998224579
Q 003606          325 SDCDAVATIFEYQNYTKTHEDSAAGVLKAGMDINCGTC----MLRHTQSAIDKGKVQEKDIDRALLNLFSVQLRLGLFNG  400 (808)
Q Consensus       325 SD~~~~~~~~~~~~~~~~~~~a~~~al~AG~D~~~~~~----~~~~l~~av~~g~~~~~~id~av~ril~~k~~~Glf~~  400 (808)
                      |||++|.++..  ++.....++.+.++.||+||.|.+.    +...|.+||++|.++++|||+||+|||++|+++|||| 
T Consensus       284 SD~~~m~~~~~--~~~~~~~~~~~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd-  360 (388)
T d1x38a1         284 SDWEGIDRITT--PAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-  360 (388)
T ss_dssp             CCTTTTGGGSS--STTTTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-
T ss_pred             CCHHHCCCCCC--CCCCCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC-
T ss_conf             42210233123--567757899999985178813478538999999999998599899999999999999999948998-


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             9999988988999778999999999999864
Q 003606          401 DPRKGKYGKLGPDDVCTSEHKKLALDAARQG  431 (808)
Q Consensus       401 ~p~~~~~~~~~~~~v~~~~h~~lA~~aA~eS  431 (808)
                      +|+..+..   ...+++++|+++|+++|+||
T Consensus       361 ~p~~~~~~---~~~i~~~~h~~~a~~aA~~S  388 (388)
T d1x38a1         361 NPYADPAM---AEQLGKQEHRDLAREAARKS  388 (388)
T ss_dssp             CCSCCGGG---GGGTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHH---HHHCCCHHHHHHHHHHHHCC
T ss_conf             88778245---44069999999999999639
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} Back     information, alignment and structure
>d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]} Back     information, alignment and structure
>d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]} Back     information, alignment and structure
>d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]} Back     information, alignment and structure