Citrus Sinensis ID: 003613
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | 2.2.26 [Sep-21-2011] | |||||||
| Q94A41 | 887 | Alpha-amylase 3, chloropl | yes | no | 0.954 | 0.868 | 0.664 | 0.0 | |
| Q8LFG1 | 413 | Probable alpha-amylase 2 | no | no | 0.350 | 0.685 | 0.501 | 7e-82 | |
| P17859 | 421 | Alpha-amylase OS=Vigna mu | N/A | no | 0.349 | 0.669 | 0.491 | 8e-78 | |
| A2YGY2 | 446 | Alpha-amylase isozyme 2A | N/A | no | 0.354 | 0.641 | 0.485 | 8e-77 | |
| Q0D9J1 | 445 | Alpha-amylase isozyme 2A | no | no | 0.354 | 0.642 | 0.485 | 9e-77 | |
| P27934 | 437 | Alpha-amylase isozyme 3E | no | no | 0.350 | 0.647 | 0.481 | 1e-75 | |
| P27932 | 440 | Alpha-amylase isozyme 3A | no | no | 0.350 | 0.643 | 0.467 | 3e-75 | |
| P00693 | 438 | Alpha-amylase type A isoz | N/A | no | 0.369 | 0.680 | 0.448 | 3e-75 | |
| P27937 | 438 | Alpha-amylase isozyme 3B | no | no | 0.350 | 0.646 | 0.453 | 6e-73 | |
| P27933 | 436 | Alpha-amylase isozyme 3D | no | no | 0.350 | 0.649 | 0.453 | 2e-72 |
| >sp|Q94A41|AMY3_ARATH Alpha-amylase 3, chloroplastic OS=Arabidopsis thaliana GN=AMY3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 1075 bits (2781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/801 (66%), Positives = 624/801 (77%), Gaps = 31/801 (3%)
Query: 1 MSTVTIRPLLP-SYRRANLNFRDRTNILLKPNYINYSIKSAPNARRFCSFKKLQKITVSS 59
MSTV I LL SY R N +R N P I+ +++S F S K L I S
Sbjct: 1 MSTVPIESLLHHSYLRHNSKV-NRGNRSFIP--ISLNLRS-----HFTSNKLLHSIGKSV 52
Query: 60 STST-STSP----ATSTDTTPVRPG---DVFFKETFPLKRTHAVEGKMFVRLQKGKDEKN 111
S+ + SP ATS+DT V DV FKE FP++R EGK++VRL++ K EKN
Sbjct: 53 GVSSMNKSPVAIRATSSDTAVVETAQSDDVIFKEIFPVQRIEKAEGKIYVRLKEVK-EKN 111
Query: 112 WQLSVGCNIPGKWILHWGVSFVGDNGSEWDQPPKKMRPPGSVSIKDYAIETPLKKLAEGD 171
W+LSVGC+IPGKWILHWGVS+VGD GSEWDQPP+ MRPPGS++IKDYAIETPLKKL+EGD
Sbjct: 112 WELSVGCSIPGKWILHWGVSYVGDTGSEWDQPPEDMRPPGSIAIKDYAIETPLKKLSEGD 171
Query: 172 VFDQVNIDFDTRSDIAAINFVLKDEETGAWYQHRGRDFKVPLVDYLQHDGNVIGTKSTFG 231
F +V I+ + S +AA+NFVLKDEETGAWYQH+GRDFKVPLVD + +GN+IG K FG
Sbjct: 172 SFFEVAINLNLESSVAALNFVLKDEETGAWYQHKGRDFKVPLVDDVPDNGNLIGAKKGFG 231
Query: 232 LWPGALGQLSKMILKADTSQSGIQDSSSESCELKQENKHLEGFYEELPIVKEIIIENTVS 291
ALGQLS + LK QD SS + +E K L+ FYEE+PI K + +N+VS
Sbjct: 232 ----ALGQLSNIPLK--------QDKSSAETDSIEERKGLQEFYEEMPISKRVADDNSVS 279
Query: 292 VSVRKCPETAKTLLNLETDLTGDVVVHWGVCRDDSKNWEIPAEPYPPETIVFKNKALRTL 351
V+ RKCPET+K ++++ETDL GDV VHWGVC++ +K WEIP+EPYP ET +FKNKALRT
Sbjct: 280 VTARKCPETSKNIVSIETDLPGDVTVHWGVCKNGTKKWEIPSEPYPEETSLFKNKALRTR 339
Query: 352 LQPKEGGKGCSRLFTVDEEFAGFLFVLKLNENTWLKCMENDFYIPLTSSSCLPAESVQEM 411
LQ K+ G G LF++D + G FVLKLNENTWL DFY+P +SS P E+ +
Sbjct: 340 LQRKDDGNGSFGLFSLDGKLEGLCFVLKLNENTWLNYRGEDFYVPFLTSSSSPVET-EAA 398
Query: 412 LIPGKAEEATQEVSQTAYTAGIIKEIRNLVSDFSSDISRKTKSKEAQKSILLEIEKLAAE 471
+ + +EVS + +T II EIRNL D SS ++KT KE Q++IL EIEKLAAE
Sbjct: 399 QVSKPKRKTDKEVSASGFTKEIITEIRNLAIDISSHKNQKTNVKEVQENILQEIEKLAAE 458
Query: 472 AYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKE 531
AYSIFR+T P F EE +E E KP KIS GTG+GFEILCQGFNWES+KSGRWY+EL+E
Sbjct: 459 AYSIFRSTTPAFSEEGVLEAEADKPDIKISSGTGSGFEILCQGFNWESNKSGRWYLELQE 518
Query: 532 KATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKIL 591
KA EL+SLGF+V+WLPPPTESVSPEGYMP+DLYNL+SRYG IDELKD V KFH VG+K+L
Sbjct: 519 KADELASLGFTVLWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDTVKKFHKVGIKVL 578
Query: 592 GDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDH 651
GD VLNHRCAH++NQNGVWN+FGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDH
Sbjct: 579 GDAVLNHRCAHFKNQNGVWNLFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDH 638
Query: 652 SQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSY 711
SQDFVRKDIKEWLCW+ E+GYDGWRLDFVRGFWGGYVKDY++A++PYFAVGEYWDSLSY
Sbjct: 639 SQDFVRKDIKEWLCWMMEEVGYDGWRLDFVRGFWGGYVKDYMDASKPYFAVGEYWDSLSY 698
Query: 712 TYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGV 771
TYGEMD+NQDAHRQRI+DWINA SG AGAFDVTTKGILH+AL +CEYWRLSD KGKPPGV
Sbjct: 699 TYGEMDYNQDAHRQRIVDWINATSGAAGAFDVTTKGILHTALQKCEYWRLSDPKGKPPGV 758
Query: 772 VGWWPSRAVTFIENHDTGSTQ 792
VGWWPSRAVTFIENHDTGSTQ
Sbjct: 759 VGWWPSRAVTFIENHDTGSTQ 779
|
Possesses endoamylolytic activity in vitro, but seems not required for breakdown of transitory starch in leaves. May be involved in the determination of the final structure of glucans by shortening long linear phospho-oligosaccharides in the chloroplast stroma. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 1 |
| >sp|Q8LFG1|AMY2_ARATH Probable alpha-amylase 2 OS=Arabidopsis thaliana GN=AMY2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P17859|AMYA_VIGMU Alpha-amylase OS=Vigna mungo GN=AMY1.1 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|A2YGY2|AMY2A_ORYSI Alpha-amylase isozyme 2A OS=Oryza sativa subsp. indica GN=AMYC2 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|Q0D9J1|AMY2A_ORYSJ Alpha-amylase isozyme 2A OS=Oryza sativa subsp. japonica GN=AMY2A PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P27934|AMY3E_ORYSJ Alpha-amylase isozyme 3E OS=Oryza sativa subsp. japonica GN=AMY1.4 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P27932|AMY3A_ORYSJ Alpha-amylase isozyme 3A OS=Oryza sativa subsp. japonica GN=AMY1.2 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|P00693|AMY1_HORVU Alpha-amylase type A isozyme OS=Hordeum vulgare GN=AMY1.1 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P27937|AMY3B_ORYSJ Alpha-amylase isozyme 3B OS=Oryza sativa subsp. japonica GN=AMY1.6 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P27933|AMY3D_ORYSJ Alpha-amylase isozyme 3D OS=Oryza sativa subsp. japonica GN=AMY1.3 PE=2 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | ||||||
| 255558214 | 900 | alpha-amylase, putative [Ricinus communi | 0.969 | 0.868 | 0.712 | 0.0 | |
| 296086427 | 885 | unnamed protein product [Vitis vinifera] | 0.959 | 0.874 | 0.709 | 0.0 | |
| 225424910 | 901 | PREDICTED: uncharacterized protein LOC10 | 0.960 | 0.860 | 0.697 | 0.0 | |
| 449478456 | 900 | PREDICTED: LOW QUALITY PROTEIN: alpha-am | 0.970 | 0.87 | 0.703 | 0.0 | |
| 449434821 | 900 | PREDICTED: alpha-amylase 3, chloroplasti | 0.970 | 0.87 | 0.703 | 0.0 | |
| 60652317 | 901 | plastid alpha-amylase [Malus x domestica | 0.972 | 0.871 | 0.69 | 0.0 | |
| 60652321 | 895 | plastid alpha-amylase [Actinidia chinens | 0.971 | 0.875 | 0.688 | 0.0 | |
| 147774624 | 887 | hypothetical protein VITISV_001008 [Viti | 0.952 | 0.866 | 0.692 | 0.0 | |
| 356526892 | 922 | PREDICTED: uncharacterized protein LOC10 | 0.893 | 0.781 | 0.708 | 0.0 | |
| 18409378 | 887 | alpha-amylase-like 3 [Arabidopsis thalia | 0.954 | 0.868 | 0.664 | 0.0 |
| >gi|255558214|ref|XP_002520134.1| alpha-amylase, putative [Ricinus communis] gi|223540626|gb|EEF42189.1| alpha-amylase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/803 (71%), Positives = 666/803 (82%), Gaps = 21/803 (2%)
Query: 1 MSTVTIRPLLP-SYRRANLNFRDRTNILLKPNYINYSIKSA-PNARRFCSFKKLQKITVS 58
MST+T+ PLL S R +L R +LKP+ +N+S K N FC+FK+ S
Sbjct: 1 MSTLTVEPLLRFSGREKSLPIGSRK--ILKPSSLNFSKKLLLSNGSSFCNFKR------S 52
Query: 59 SSTSTSTSPATSTDTTPV---RPGDVFFKETFPLKRTHAVEGKMFVRLQKG-KDEKNWQL 114
S + +++TDT + + DV FKETF L RT +EGK+FVRL K KD++ WQL
Sbjct: 53 PPLSHTVRASSTTDTALIETFKSADVLFKETFSLSRTETIEGKIFVRLDKEEKDQQRWQL 112
Query: 115 SVGCNIPGKWILHWGVSFVGDNGSEWDQPPKKMRPPGSVSIKDYAIETPLKKLAEGDVFD 174
SVGC++PGKWILHWGVS+VGD GSEWDQPPK MRP GS+SIKDYAIETPL+K +E D+F
Sbjct: 113 SVGCSLPGKWILHWGVSYVGDVGSEWDQPPKNMRPRGSISIKDYAIETPLEKSSEADMFY 172
Query: 175 QVNIDFDTRSDIAAINFVLKDEETGAWYQHRGRDFKVPLVDYLQHDGNVIGTKSTFGLWP 234
+V ID D S IAAINFVLKDEETGAWYQH+GRDFKVPLVDYL GNV+G K F +WP
Sbjct: 173 EVKIDLDPNSSIAAINFVLKDEETGAWYQHKGRDFKVPLVDYLLEGGNVVGAKRGFSIWP 232
Query: 235 GALGQLSKMILKADTSQSGIQDSSSESCELKQENKHLEGFYEELPIVKEIIIENTVSVSV 294
G+L LS M+LK +T S +D++SE+ ++KQ++ L+GFYEE PI K++ I+N+ +VSV
Sbjct: 233 GSL--LSNMLLKTETLPSKDEDNNSETKDVKQDSGQLKGFYEEQPITKQVTIQNSATVSV 290
Query: 295 RKCPETAKTLLNLETDLTGDVVVHWGVCRDDSKNWEIPAEPYPPETIVFKNKALRTLLQP 354
KCP+TAK LL LETDL G+VV+HWGVCRDD+KNWEIP+ P+PPET VFKNKAL+T+LQP
Sbjct: 291 TKCPKTAKYLLYLETDLPGEVVLHWGVCRDDAKNWEIPSSPHPPETTVFKNKALQTMLQP 350
Query: 355 KEGGKGCSRLFTVDEEFAGFLFVLKLNENTWLKCMENDFYIPLTSSSCLPAESVQE---- 410
+GG GCS LF++DEEFAGFLFVLKLNE TWLKC NDFY+PL++SS LP + Q
Sbjct: 351 NDGGNGCSGLFSLDEEFAGFLFVLKLNEGTWLKCKGNDFYVPLSTSSSLPTQPGQGQSEG 410
Query: 411 MLIPGKAEEATQEVSQTAYTAGIIKEIRNLVSDFSSDISRKTKSKEAQKSILLEIEKLAA 470
+L GK E +EVS+TAYT II EIRNLV+ SS+ R+TK+KEAQ+SIL EIEKLAA
Sbjct: 411 VLASGKDAEGNEEVSRTAYTDEIIDEIRNLVNGISSEKVRQTKTKEAQESILQEIEKLAA 470
Query: 471 EAYSIFRTTAPTFFEEAAVELEESK-PPAKISPGTGTGFEILCQGFNWESHKSGRWYMEL 529
EAYSIFR++ PTF EE+ +E E K PPAKI GTGTG EIL QGFNWES+KSGRW+MEL
Sbjct: 471 EAYSIFRSSIPTFTEESVLESEVEKAPPAKICSGTGTGHEILLQGFNWESNKSGRWHMEL 530
Query: 530 KEKATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMK 589
KEKA E+SSLGF+VIWLPPPTESVSPEGYMP+DLYNL+SRYG+IDELKD+V H VG+K
Sbjct: 531 KEKAAEISSLGFTVIWLPPPTESVSPEGYMPKDLYNLNSRYGSIDELKDLVKSLHRVGLK 590
Query: 590 ILGDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNI 649
+LGD VLNHRCAH+QNQNGVWNIFGGRLNWDDRA+VADDPHFQGRG+KSSGDNFHAAPNI
Sbjct: 591 VLGDAVLNHRCAHFQNQNGVWNIFGGRLNWDDRAIVADDPHFQGRGSKSSGDNFHAAPNI 650
Query: 650 DHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSL 709
DHSQDFVR+D+KEWLCWLR+EIGY+GWRLDFVRGFWGGYVKDY+EATEPYFAVGEYWDSL
Sbjct: 651 DHSQDFVRQDLKEWLCWLRDEIGYNGWRLDFVRGFWGGYVKDYMEATEPYFAVGEYWDSL 710
Query: 710 SYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPP 769
SYTYGEMDHNQDAHRQRIIDWINA +GTAGAFDVTTKGILHSALDRCEYWRLSD+KGKPP
Sbjct: 711 SYTYGEMDHNQDAHRQRIIDWINATNGTAGAFDVTTKGILHSALDRCEYWRLSDQKGKPP 770
Query: 770 GVVGWWPSRAVTFIENHDTGSTQ 792
GVVGWWPSRAVTFIENHDTGSTQ
Sbjct: 771 GVVGWWPSRAVTFIENHDTGSTQ 793
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086427|emb|CBI32016.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225424910|ref|XP_002270049.1| PREDICTED: uncharacterized protein LOC100267346 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449478456|ref|XP_004155323.1| PREDICTED: LOW QUALITY PROTEIN: alpha-amylase 3, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449434821|ref|XP_004135194.1| PREDICTED: alpha-amylase 3, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|60652317|gb|AAX33231.1| plastid alpha-amylase [Malus x domestica] | Back alignment and taxonomy information |
|---|
| >gi|60652321|gb|AAX33233.1| plastid alpha-amylase [Actinidia chinensis] | Back alignment and taxonomy information |
|---|
| >gi|147774624|emb|CAN69906.1| hypothetical protein VITISV_001008 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356526892|ref|XP_003532050.1| PREDICTED: uncharacterized protein LOC100788193 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|18409378|ref|NP_564977.1| alpha-amylase-like 3 [Arabidopsis thaliana] gi|75306316|sp|Q94A41.1|AMY3_ARATH RecName: Full=Alpha-amylase 3, chloroplastic; Short=AtAMY3; AltName: Full=1,4-alpha-D-glucan glucanohydrolase; Flags: Precursor gi|15215738|gb|AAK91414.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gi|23308479|gb|AAN18209.1| At1g69830/T17F3_14 [Arabidopsis thaliana] gi|332196862|gb|AEE34983.1| alpha-amylase-like 3 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 807 | ||||||
| TAIR|locus:2196759 | 887 | AMY3 "alpha-amylase-like 3" [A | 0.961 | 0.874 | 0.650 | 5.3e-285 | |
| TAIR|locus:2199808 | 413 | AMY2 "alpha-amylase-like 2" [A | 0.348 | 0.680 | 0.505 | 2e-81 | |
| UNIPROTKB|P27934 | 437 | AMY1.4 "Alpha-amylase isozyme | 0.350 | 0.647 | 0.484 | 6.3e-76 | |
| UNIPROTKB|P27932 | 440 | AMY1.2 "Alpha-amylase isozyme | 0.350 | 0.643 | 0.470 | 1.9e-74 | |
| UNIPROTKB|P27937 | 438 | AMY1.6 "Alpha-amylase isozyme | 0.350 | 0.646 | 0.457 | 2.8e-73 | |
| UNIPROTKB|P17654 | 434 | AMY1.1 "Alpha-amylase" [Oryza | 0.354 | 0.658 | 0.453 | 4.6e-73 | |
| UNIPROTKB|P27939 | 437 | AMY1.7 "Alpha-amylase isozyme | 0.350 | 0.647 | 0.453 | 1.2e-72 | |
| UNIPROTKB|P27933 | 436 | AMY1.3 "Alpha-amylase isozyme | 0.350 | 0.649 | 0.457 | 2.5e-72 | |
| TAIR|locus:2117398 | 423 | AMY1 "alpha-amylase-like" [Ara | 0.350 | 0.669 | 0.460 | 7.2e-68 | |
| RGD|1309348 | 232 | Amy2-3 "amylase 2-3, pancreati | 0.231 | 0.806 | 0.286 | 2.1e-12 |
| TAIR|locus:2196759 AMY3 "alpha-amylase-like 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2738 (968.9 bits), Expect = 5.3e-285, P = 5.3e-285
Identities = 517/795 (65%), Positives = 604/795 (75%)
Query: 1 MSTVTIRPLLP-SYRRANLNFRDRTNILLKPNYINYSIKSAPNARRFCSFKKLQKIXXXX 59
MSTV I LL SY R N +R N P +N N + S K +
Sbjct: 1 MSTVPIESLLHHSYLRHNSKV-NRGNRSFIPISLNLRSHFTSN-KLLHSIGKSVGVSSMN 58
Query: 60 XX--XXXXXXXXXXXXXPVRPGDVFFKETFPLKRTHAVEGKMFVRLQKGKDEKNWQLSVG 117
+ DV FKE FP++R EGK++VRL++ K EKNW+LSVG
Sbjct: 59 KSPVAIRATSSDTAVVETAQSDDVIFKEIFPVQRIEKAEGKIYVRLKEVK-EKNWELSVG 117
Query: 118 CNIPGKWILHWGVSFVGDNGSEWDQPPKKMRPPGSVSIKDYAIETPLKKLAEGDVFDQVN 177
C+IPGKWILHWGVS+VGD GSEWDQPP+ MRPPGS++IKDYAIETPLKKL+EGD F +V
Sbjct: 118 CSIPGKWILHWGVSYVGDTGSEWDQPPEDMRPPGSIAIKDYAIETPLKKLSEGDSFFEVA 177
Query: 178 IDFDTRSDIAAINFVLKDEETGAWYQHRGRDFKVPLVDYLQHDGNVIGTKSTFGLWPGAL 237
I+ + S +AA+NFVLKDEETGAWYQH+GRDFKVPLVD + +GN+IG K FG AL
Sbjct: 178 INLNLESSVAALNFVLKDEETGAWYQHKGRDFKVPLVDDVPDNGNLIGAKKGFG----AL 233
Query: 238 GQLSKMILKADTXXXXXXXXXXXXCELKQENKHLEGFYEELPIVKEIIIENTVSVSVRKC 297
GQLS + LK D +E K L+ FYEE+PI K + +N+VSV+ RKC
Sbjct: 234 GQLSNIPLKQDKSSAETDSI--------EERKGLQEFYEEMPISKRVADDNSVSVTARKC 285
Query: 298 PETAKTLLNLETDLTGDVVVHWGVCRDDSKNWEIPAEPYPPETIVFKNKALRTLLQPKEG 357
PET+K ++++ETDL GDV VHWGVC++ +K WEIP+EPYP ET +FKNKALRT LQ K+
Sbjct: 286 PETSKNIVSIETDLPGDVTVHWGVCKNGTKKWEIPSEPYPEETSLFKNKALRTRLQRKDD 345
Query: 358 GKGCSRLFTVDEEFAGFLFVLKLNENTWLKCMENDFYIPLTSSSCLPAESVQEMLIPGKA 417
G G LF++D + G FVLKLNENTWL DFY+P +SS P E+ + K
Sbjct: 346 GNGSFGLFSLDGKLEGLCFVLKLNENTWLNYRGEDFYVPFLTSSSSPVETEAAQVSKPK- 404
Query: 418 EEATQEVSQTAYTAGIIKEIRNLVSDFSSDISRKTKSKEAQKSILLEIEKLAAEAYSIFR 477
+ +EVS + +T II EIRNL D SS ++KT KE Q++IL EIEKLAAEAYSIFR
Sbjct: 405 RKTDKEVSASGFTKEIITEIRNLAIDISSHKNQKTNVKEVQENILQEIEKLAAEAYSIFR 464
Query: 478 TTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELS 537
+T P F EE +E E KP KIS GTG+GFEILCQGFNWES+KSGRWY+EL+EKA EL+
Sbjct: 465 STTPAFSEEGVLEAEADKPDIKISSGTGSGFEILCQGFNWESNKSGRWYLELQEKADELA 524
Query: 538 SLGFSVIWLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLN 597
SLGF+V+WLPPPTESVSPEGYMP+DLYNL+SRYG IDELKD V KFH VG+K+LGD VLN
Sbjct: 525 SLGFTVLWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDTVKKFHKVGIKVLGDAVLN 584
Query: 598 HRCAHYQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVR 657
HRCAH++NQNGVWN+FGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVR
Sbjct: 585 HRCAHFKNQNGVWNLFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVR 644
Query: 658 KDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSYTYGEMD 717
KDIKEWLCW+ E+GYDGWRLDFVRGFWGGYVKDY++A++PYFAVGEYWDSLSYTYGEMD
Sbjct: 645 KDIKEWLCWMMEEVGYDGWRLDFVRGFWGGYVKDYMDASKPYFAVGEYWDSLSYTYGEMD 704
Query: 718 HNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPS 777
+NQDAHRQRI+DWINA SG AGAFDVTTKGILH+AL +CEYWRLSD KGKPPGVVGWWPS
Sbjct: 705 YNQDAHRQRIVDWINATSGAAGAFDVTTKGILHTALQKCEYWRLSDPKGKPPGVVGWWPS 764
Query: 778 RAVTFIENHDTGSTQ 792
RAVTFIENHDTGSTQ
Sbjct: 765 RAVTFIENHDTGSTQ 779
|
|
| TAIR|locus:2199808 AMY2 "alpha-amylase-like 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P27934 AMY1.4 "Alpha-amylase isozyme 3E" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P27932 AMY1.2 "Alpha-amylase isozyme 3A" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P27937 AMY1.6 "Alpha-amylase isozyme 3B" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P17654 AMY1.1 "Alpha-amylase" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P27939 AMY1.7 "Alpha-amylase isozyme 3C" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P27933 AMY1.3 "Alpha-amylase isozyme 3D" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2117398 AMY1 "alpha-amylase-like" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| RGD|1309348 Amy2-3 "amylase 2-3, pancreatic" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q94A41 | AMY3_ARATH | 3, ., 2, ., 1, ., 1 | 0.6641 | 0.9541 | 0.8680 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1 | 0.691 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 807 | |||
| PLN02784 | 894 | PLN02784, PLN02784, alpha-amylase | 0.0 | |
| cd11314 | 302 | cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase | 1e-132 | |
| PLN02361 | 401 | PLN02361, PLN02361, alpha-amylase | 1e-123 | |
| PLN00196 | 428 | PLN00196, PLN00196, alpha-amylase; Provisional | 8e-99 | |
| PRK09441 | 479 | PRK09441, PRK09441, cytoplasmic alpha-amylase; Rev | 2e-43 | |
| cd11318 | 391 | cd11318, AmyAc_bac_fung_AmyA, Alpha amylase cataly | 7e-34 | |
| smart00642 | 166 | smart00642, Aamy, Alpha-amylase domain | 2e-21 | |
| pfam00128 | 314 | pfam00128, Alpha-amylase, Alpha amylase, catalytic | 4e-18 | |
| cd00551 | 260 | cd00551, AmyAc_family, Alpha amylase catalytic dom | 6e-15 | |
| COG0366 | 505 | COG0366, AmyA, Glycosidases [Carbohydrate transpor | 7e-15 | |
| cd11339 | 344 | cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catal | 8e-13 | |
| cd11320 | 389 | cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase | 9e-12 | |
| cd11340 | 407 | cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catal | 3e-11 | |
| cd11319 | 375 | cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic d | 2e-10 | |
| cd11352 | 443 | cd11352, AmyAc_5, Alpha amylase catalytic domain f | 3e-09 | |
| cd11337 | 328 | cd11337, AmyAc_CMD_like, Alpha amylase catalytic d | 3e-09 | |
| cd11313 | 336 | cd11313, AmyAc_arch_bac_AmyA, Alpha amylase cataly | 1e-08 | |
| cd11350 | 390 | cd11350, AmyAc_4, Alpha amylase catalytic domain f | 3e-08 | |
| cd11354 | 357 | cd11354, AmyAc_bac_CMD_like, Alpha amylase catalyt | 6e-08 | |
| cd11353 | 366 | cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase cat | 9e-08 | |
| cd11338 | 389 | cd11338, AmyAc_CMD, Alpha amylase catalytic domain | 2e-07 | |
| cd11317 | 329 | cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalyt | 2e-07 | |
| PRK09505 | 683 | PRK09505, malS, alpha-amylase; Reviewed | 3e-07 | |
| cd11316 | 403 | cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic | 3e-07 | |
| cd11348 | 429 | cd11348, AmyAc_2, Alpha amylase catalytic domain f | 4e-07 | |
| cd11334 | 447 | cd11334, AmyAc_TreS, Alpha amylase catalytic domai | 6e-07 | |
| TIGR02456 | 539 | TIGR02456, treS_nterm, trehalose synthase | 7e-07 | |
| cd11315 | 352 | cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic | 3e-06 | |
| cd11333 | 428 | cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase ca | 6e-06 | |
| cd11325 | 436 | cd11325, AmyAc_GTHase, Alpha amylase catalytic dom | 1e-05 | |
| TIGR02403 | 543 | TIGR02403, trehalose_treC, alpha,alpha-phosphotreh | 5e-05 | |
| COG0296 | 628 | COG0296, GlgB, 1,4-alpha-glucan branching enzyme [ | 5e-05 | |
| cd11328 | 470 | cd11328, AmyAc_maltase, Alpha amylase catalytic do | 3e-04 | |
| cd11321 | 406 | cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic | 3e-04 | |
| PRK10933 | 551 | PRK10933, PRK10933, trehalose-6-phosphate hydrolas | 4e-04 | |
| cd11330 | 472 | cd11330, AmyAc_OligoGlu, Alpha amylase catalytic d | 0.002 | |
| cd11322 | 402 | cd11322, AmyAc_Glg_BE, Alpha amylase catalytic dom | 0.002 | |
| cd11326 | 433 | cd11326, AmyAc_Glg_debranch, Alpha amylase catalyt | 0.002 | |
| TIGR02100 | 688 | TIGR02100, glgX_debranch, glycogen debranching enz | 0.004 |
| >gnl|CDD|215419 PLN02784, PLN02784, alpha-amylase | Back alignment and domain information |
|---|
Score = 1247 bits (3228), Expect = 0.0
Identities = 568/796 (71%), Positives = 653/796 (82%), Gaps = 14/796 (1%)
Query: 1 MSTVTIRPLLPSYRRANLNFRDRTNILLKPNYINYSIKSAPNARRFCSFKKLQKITVSSS 60
MSTV I LL + R +N S+KS N + FC+FK S
Sbjct: 1 MSTVCIESLLHHSGLEKNSKIGRGKRSPSS--LNLSLKSLTNGKSFCNFKM------SVG 52
Query: 61 TSTSTSPATSTDTTPV---RPGDVFFKETFPLKRTHAVEGKMFVRLQKGKDEKNWQLSVG 117
S++T A+S+DT V + DVFFKETFP+KRT VEGK++VRL + K+EKNW+LSVG
Sbjct: 53 VSSTTRRASSSDTALVETAQSDDVFFKETFPVKRTEKVEGKIYVRL-EEKNEKNWKLSVG 111
Query: 118 CNIPGKWILHWGVSFVGDNGSEWDQPPKKMRPPGSVSIKDYAIETPLKKLAEGDVFDQVN 177
C+IPGKWILHWGVS+VGD GSEWDQPP++MRPPGS++IKDYAIETPLKK +EGD F +V
Sbjct: 112 CSIPGKWILHWGVSYVGDTGSEWDQPPEEMRPPGSIAIKDYAIETPLKKSSEGDSFYEVT 171
Query: 178 IDFDTRSDIAAINFVLKDEETGAWYQHRGRDFKVPLVDYLQHDGNVIGTKSTFGLWPGAL 237
ID D S IAAINFVLKDEETGAWYQH+GRDFKVPLVD L GN +G K FG+WPGAL
Sbjct: 172 IDLDPNSSIAAINFVLKDEETGAWYQHKGRDFKVPLVDDLPDGGNNVGAKKGFGIWPGAL 231
Query: 238 GQLSKMILKADTSQSGIQDSSSESCELKQENKHLEGFYEELPIVKEIIIENTVSVSVRKC 297
GQLS ++LK + S S QD SS + E K L+GFYEE+PIVK + ++N+V+V+VRKC
Sbjct: 232 GQLSNILLKDEGSPSKEQDKSSSELDSAAERKGLKGFYEEMPIVKRVAVDNSVTVTVRKC 291
Query: 298 PETAKTLLNLETDLTGDVVVHWGVCRDDSKNWEIPAEPYPPETIVFKNKALRTLLQPKEG 357
PETAK L+ LETDL GDVVVHWGVC+D +K WEIP EP+PPET +FKNKAL+T+LQ K+
Sbjct: 292 PETAKNLVYLETDLPGDVVVHWGVCKDGAKTWEIPPEPHPPETSLFKNKALQTMLQQKDD 351
Query: 358 GKGCSRLFTVDEEFAGFLFVLKLNENTWLKCMENDFYIPLTSSSCLPAESVQEMLIPGKA 417
G G S LF++D E G LFVLKLNE TWL+C NDFY+PL +SS LP ++ Q GK
Sbjct: 352 GNGSSGLFSLDGELEGLLFVLKLNEGTWLRCNGNDFYVPLLTSSSLPTQTEQGQ-SEGKT 410
Query: 418 EEATQEVSQTAYTAGIIKEIRNLVSDFSSDISRKTKSKEAQKSILLEIEKLAAEAYSIFR 477
+ +EVS++AYT GII EIRNLV D SS+ +KTK+KE Q+SIL EIEKLAAEAYSIFR
Sbjct: 411 AKTNKEVSKSAYTDGIIGEIRNLVIDISSEKGQKTKTKELQESILQEIEKLAAEAYSIFR 470
Query: 478 TTAPTFFEEAAVELE-ESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATEL 536
+T PTF EE+ +E E KPP KI GTG+GFEILCQGFNWESHKSGRWYMEL EKA EL
Sbjct: 471 STIPTFSEESVLEAERIQKPPIKICSGTGSGFEILCQGFNWESHKSGRWYMELGEKAAEL 530
Query: 537 SSLGFSVIWLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVL 596
SSLGF+V+WLPPPTESVSPEGYMP+DLYNL+SRYG IDELKD+V FH+VG+K+LGD VL
Sbjct: 531 SSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDAVL 590
Query: 597 NHRCAHYQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFV 656
NHRCAH+QNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFV
Sbjct: 591 NHRCAHFQNQNGVWNIFGGRLNWDDRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFV 650
Query: 657 RKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSYTYGEM 716
RKD+KEWLCW+R E+GYDGWRLDFVRGFWGGYVKDY+EA+EPYFAVGEYWDSLSYTYGEM
Sbjct: 651 RKDLKEWLCWMRKEVGYDGWRLDFVRGFWGGYVKDYMEASEPYFAVGEYWDSLSYTYGEM 710
Query: 717 DHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWP 776
D+NQDAHRQRI+DWINA +GTAGAFDVTTKGILHSAL+RCEYWRLSD+KGKPPGVVGWWP
Sbjct: 711 DYNQDAHRQRIVDWINATNGTAGAFDVTTKGILHSALERCEYWRLSDQKGKPPGVVGWWP 770
Query: 777 SRAVTFIENHDTGSTQ 792
SRAVTFIENHDTGSTQ
Sbjct: 771 SRAVTFIENHDTGSTQ 786
|
Length = 894 |
| >gnl|CDD|200453 cd11314, AmyAc_arch_bac_plant_AmyA, Alpha amylase catalytic domain found in archaeal, bacterial, and plant Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|177990 PLN02361, PLN02361, alpha-amylase | Back alignment and domain information |
|---|
| >gnl|CDD|165762 PLN00196, PLN00196, alpha-amylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236518 PRK09441, PRK09441, cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|200457 cd11318, AmyAc_bac_fung_AmyA, Alpha amylase catalytic domain found in bacterial and fungal Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|214758 smart00642, Aamy, Alpha-amylase domain | Back alignment and domain information |
|---|
| >gnl|CDD|215737 pfam00128, Alpha-amylase, Alpha amylase, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|200451 cd00551, AmyAc_family, Alpha amylase catalytic domain family | Back alignment and domain information |
|---|
| >gnl|CDD|223443 COG0366, AmyA, Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|200478 cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200459 cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200479 cd11340, AmyAc_bac_CMD_like_3, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200458 cd11319, AmyAc_euk_AmyA, Alpha amylase catalytic domain found in eukaryotic Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|200489 cd11352, AmyAc_5, Alpha amylase catalytic domain found in an uncharacterized protein family | Back alignment and domain information |
|---|
| >gnl|CDD|200476 cd11337, AmyAc_CMD_like, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200452 cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|200488 cd11350, AmyAc_4, Alpha amylase catalytic domain found in an uncharacterized protein family | Back alignment and domain information |
|---|
| >gnl|CDD|200491 cd11354, AmyAc_bac_CMD_like, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200490 cd11353, AmyAc_euk_bac_CMD_like, Alpha amylase catalytic domain found in eukaryotic and bacterial cyclomaltodextrinases and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200477 cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200456 cd11317, AmyAc_bac_euk_AmyA, Alpha amylase catalytic domain found in bacterial and eukaryotic Alpha amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|236543 PRK09505, malS, alpha-amylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|200455 cd11316, AmyAc_bac2_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|200486 cd11348, AmyAc_2, Alpha amylase catalytic domain found in an uncharacterized protein family | Back alignment and domain information |
|---|
| >gnl|CDD|200473 cd11334, AmyAc_TreS, Alpha amylase catalytic domain found in Trehalose synthetase | Back alignment and domain information |
|---|
| >gnl|CDD|233874 TIGR02456, treS_nterm, trehalose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|200454 cd11315, AmyAc_bac1_AmyA, Alpha amylase catalytic domain found in bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|200472 cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200464 cd11325, AmyAc_GTHase, Alpha amylase catalytic domain found in Glycosyltrehalose trehalohydrolase (also called Maltooligosyl trehalose Trehalohydrolase) | Back alignment and domain information |
|---|
| >gnl|CDD|233851 TIGR02403, trehalose_treC, alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
| >gnl|CDD|223373 COG0296, GlgB, 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|200467 cd11328, AmyAc_maltase, Alpha amylase catalytic domain found in maltase (also known as alpha glucosidase) and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200460 cd11321, AmyAc_bac_euk_BE, Alpha amylase catalytic domain found in bacterial and eukaryotic branching enzymes | Back alignment and domain information |
|---|
| >gnl|CDD|182849 PRK10933, PRK10933, trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|200469 cd11330, AmyAc_OligoGlu, Alpha amylase catalytic domain found in oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase) and related proteins | Back alignment and domain information |
|---|
| >gnl|CDD|200461 cd11322, AmyAc_Glg_BE, Alpha amylase catalytic domain found in the Glycogen branching enzyme (also called 1,4-alpha-glucan branching enzyme) | Back alignment and domain information |
|---|
| >gnl|CDD|200465 cd11326, AmyAc_Glg_debranch, Alpha amylase catalytic domain found in glycogen debranching enzymes | Back alignment and domain information |
|---|
| >gnl|CDD|131155 TIGR02100, glgX_debranch, glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 807 | |||
| PLN02784 | 894 | alpha-amylase | 100.0 | |
| PLN02361 | 401 | alpha-amylase | 100.0 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 100.0 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 100.0 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 100.0 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 100.0 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 100.0 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 100.0 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 100.0 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 100.0 | |
| PLN02784 | 894 | alpha-amylase | 100.0 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 100.0 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 100.0 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 100.0 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 100.0 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 100.0 | |
| PRK13840 | 495 | sucrose phosphorylase; Provisional | 100.0 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 100.0 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 100.0 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 100.0 | |
| COG0366 | 505 | AmyA Glycosidases [Carbohydrate transport and meta | 100.0 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 99.98 | |
| TIGR03852 | 470 | sucrose_gtfA sucrose phosphorylase. In the forward | 99.98 | |
| KOG0471 | 545 | consensus Alpha-amylase [Carbohydrate transport an | 99.97 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 99.97 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 99.97 | |
| PLN02960 | 897 | alpha-amylase | 99.97 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 99.96 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 99.96 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 99.96 | |
| TIGR02455 | 688 | TreS_stutzeri trehalose synthase, Pseudomonas stut | 99.95 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 99.95 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 99.94 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 99.93 | |
| TIGR02401 | 825 | trehalose_TreY malto-oligosyltrehalose synthase. T | 99.93 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 99.91 | |
| KOG0470 | 757 | consensus 1,4-alpha-glucan branching enzyme/starch | 99.9 | |
| KOG2212 | 504 | consensus Alpha-amylase [Carbohydrate transport an | 99.9 | |
| PRK14511 | 879 | maltooligosyl trehalose synthase; Provisional | 99.84 | |
| PLN03244 | 872 | alpha-amylase; Provisional | 99.76 | |
| PRK14507 | 1693 | putative bifunctional 4-alpha-glucanotransferase/m | 99.75 | |
| COG3280 | 889 | TreY Maltooligosyl trehalose synthase [Carbohydrat | 99.65 | |
| TIGR01531 | 1464 | glyc_debranch glycogen debranching enzymye. glycog | 99.44 | |
| PF14701 | 423 | hDGE_amylase: glucanotransferase domain of human g | 98.52 | |
| PF14872 | 811 | GHL5: Hypothetical glycoside hydrolase 5 | 98.14 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 98.09 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 98.07 | |
| PF02324 | 809 | Glyco_hydro_70: Glycosyl hydrolase family 70; Inte | 98.06 | |
| COG1649 | 418 | Uncharacterized protein conserved in bacteria [Fun | 97.46 | |
| PF02324 | 809 | Glyco_hydro_70: Glycosyl hydrolase family 70; Inte | 97.03 | |
| cd06592 | 303 | GH31_glucosidase_KIAA1161 KIAA1161 is an uncharact | 96.58 | |
| KOG3625 | 1521 | consensus Alpha amylase [Carbohydrate transport an | 96.53 | |
| PLN02635 | 538 | disproportionating enzyme | 96.51 | |
| cd06597 | 340 | GH31_transferase_CtsY CtsY (cyclic tetrasaccharide | 96.33 | |
| PF02065 | 394 | Melibiase: Melibiase; InterPro: IPR000111 O-Glycos | 96.28 | |
| cd06593 | 308 | GH31_xylosidase_YicI YicI alpha-xylosidase is a gl | 96.1 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 96.05 | |
| PF13199 | 559 | Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: | 96.01 | |
| PLN02316 | 1036 | synthase/transferase | 95.71 | |
| PLN02316 | 1036 | synthase/transferase | 95.35 | |
| cd06599 | 317 | GH31_glycosidase_Aec37 Glycosyl hydrolase family 3 | 95.18 | |
| PF03423 | 87 | CBM_25: Carbohydrate binding domain (family 25); I | 95.13 | |
| cd06594 | 317 | GH31_glucosidase_YihQ YihQ is a bacterial alpha-gl | 93.38 | |
| PRK14582 | 671 | pgaB outer membrane N-deacetylase; Provisional | 93.34 | |
| cd06591 | 319 | GH31_xylosidase_XylS XylS is a glycosyl hydrolase | 93.23 | |
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 93.17 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 93.07 | |
| cd06604 | 339 | GH31_glucosidase_II_MalA Alpha-glucosidase II (alp | 92.83 | |
| cd06600 | 317 | GH31_MGAM-like This family includes the following | 92.52 | |
| PRK14508 | 497 | 4-alpha-glucanotransferase; Provisional | 92.07 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 91.74 | |
| PRK11052 | 695 | malQ 4-alpha-glucanotransferase; Provisional | 91.55 | |
| cd06602 | 339 | GH31_MGAM_SI_GAA This family includes the followin | 91.19 | |
| TIGR00217 | 513 | malQ 4-alpha-glucanotransferase. This enzyme is kn | 91.1 | |
| COG3589 | 360 | Uncharacterized conserved protein [Function unknow | 90.74 | |
| PRK10426 | 635 | alpha-glucosidase; Provisional | 90.61 | |
| PF05913 | 357 | DUF871: Bacterial protein of unknown function (DUF | 89.53 | |
| TIGR01531 | 1464 | glyc_debranch glycogen debranching enzymye. glycog | 89.37 | |
| PF02446 | 496 | Glyco_hydro_77: 4-alpha-glucanotransferase; InterP | 89.19 | |
| TIGR01370 | 315 | cysRS possible cysteinyl-tRNA synthetase, Methanoc | 89.09 | |
| cd06598 | 317 | GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide | 88.44 | |
| PF01055 | 441 | Glyco_hydro_31: Glycosyl hydrolases family 31 ; In | 87.7 | |
| PRK10658 | 665 | putative alpha-glucosidase; Provisional | 87.43 | |
| COG1501 | 772 | Alpha-glucosidases, family 31 of glycosyl hydrolas | 86.94 | |
| KOG3625 | 1521 | consensus Alpha amylase [Carbohydrate transport an | 86.84 | |
| cd06595 | 292 | GH31_xylosidase_XylS-like This family represents a | 86.75 | |
| cd06542 | 255 | GH18_EndoS-like Endo-beta-N-acetylglucosaminidases | 86.08 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 85.47 | |
| PF10566 | 273 | Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: | 85.28 | |
| cd06589 | 265 | GH31 The enzymes of glycosyl hydrolase family 31 ( | 81.76 | |
| PF03423 | 87 | CBM_25: Carbohydrate binding domain (family 25); I | 81.15 | |
| PLN02763 | 978 | hydrolase, hydrolyzing O-glycosyl compounds | 80.82 | |
| cd02875 | 358 | GH18_chitobiase Chitobiase (also known as di-N-ace | 80.03 |
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-171 Score=1486.37 Aligned_cols=794 Identities=71% Similarity=1.218 Sum_probs=744.5
Q ss_pred CcceeccccchhhhhccCCCCCCCccccccccceeccccCCCcccccccccccceecccCCCCCCCCCCCCCCCC---CC
Q 003613 1 MSTVTIRPLLPSYRRANLNFRDRTNILLKPNYINYSIKSAPNARRFCSFKKLQKITVSSSTSTSTSPATSTDTTP---VR 77 (807)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 77 (807)
||||||||||+||||+++.++++++ .+|+||||++++|+||++||||+....+.-. ..++++++|++ .+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 72 (894)
T PLN02784 1 MSTVCIESLLHHSGLEKNSKIGRGK--RSPSSLNLSLKSLTNGKSFCNFKMSVGVSST------TRRASSSDTALVETAQ 72 (894)
T ss_pred CCceeeHHHHhHHhhccccccCccc--ccccccccccccccCCcccccccCCCCcccc------cccccccceeeeeccc
Confidence 9999999999999999999977433 3499999999999999999999875544222 12467777877 56
Q ss_pred CCcceeeeeeeeeeeeeeCCeEEEEEEecCCCCceEEEEEecCCCceEEEeeeeecCCCCCCccCCCCCCCCCCcccccc
Q 003613 78 PGDVFFKETFPLKRTHAVEGKMFVRLQKGKDEKNWQLSVGCNIPGKWILHWGVSFVGDNGSEWDQPPKKMRPPGSVSIKD 157 (807)
Q Consensus 78 ~~~~~~~e~~~~~~~~~~~~~~~v~v~~~~~~~~~~v~~~td~~~~~~lHWgv~~~~~~~~eW~~Pp~~~~P~gt~~~~~ 157 (807)
..+++|+|.|++.++++|||+|+|+|+ +++++|++|+|+||+|++|||||||++.+++++||++||++||||||+.+|+
T Consensus 73 ~~~v~~kk~F~v~~~e~ve~~~~v~l~-~~~~g~~kv~v~t~~~~~~vLHWGVs~~~~~~~EW~~PP~~~~PpgS~~~~~ 151 (894)
T PLN02784 73 SDDVFFKETFPVKRTEKVEGKIYVRLE-EKNEKNWKLSVGCSIPGKWILHWGVSYVGDTGSEWDQPPEEMRPPGSIAIKD 151 (894)
T ss_pred cccceeeeeeeecccceecceeEEEEE-ccCCCcEEEEEEecCCCCeEEEEeEecCCCCCccccCCCcccCCCCcEEecC
Confidence 889999999999999999999999997 7899999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccCCCceeEEEEeecCCCCceeEEEEEEeCCccchhccCCcceeeecccccccCCccccccccccccCchH
Q 003613 158 YAIETPLKKLAEGDVFDQVNIDFDTRSDIAAINFVLKDEETGAWYQHRGRDFKVPLVDYLQHDGNVIGTKSTFGLWPGAL 237 (807)
Q Consensus 158 ~A~~T~f~~~~~~~~~~~~~i~~~~d~~~~~i~FVlk~~~~~~W~~~~G~df~v~l~~~~~~~~~~~~~~~~~~~w~~~~ 237 (807)
+||||||++++.|+.++++.|+|+++++++||+||||++++|+||||||+||||||+++++++++++|+++++.+|||+|
T Consensus 152 ~A~eT~f~~~s~~~~~~~v~iel~l~~~~~ai~FVLk~~~~g~W~~~~G~DF~V~l~~~~~~~~~~~~~~~~~~~~~~~l 231 (894)
T PLN02784 152 YAIETPLKKSSEGDSFYEVTIDLDPNSSIAAINFVLKDEETGAWYQHKGRDFKVPLVDDLPDGGNNVGAKKGFGIWPGAL 231 (894)
T ss_pred eEEeccccccccCCcceeEEEEEeeCCceeeEEEEEEeCCCCchhhcCCccEEEecccccccccceeehhhhcCcCcCcc
Confidence 99999999999888888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhcccCCCCCCCCCCcccchhhhhhhhhhhhhhcccchhhheecceeEEEEeeccCCCceEEEEEcCCCCCeEE
Q 003613 238 GQLSKMILKADTSQSGIQDSSSESCELKQENKHLEGFYEELPIVKEIIIENTVSVSVRKCPETAKTLLNLETDLTGDVVV 317 (807)
Q Consensus 238 ~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~~~~~~~~~v~~~~~~~~~~~~v~~~td~~~~~vl 317 (807)
++||++++|+|+++++.+++++.+.++....|+|++||||+||+|++.++|.++|+||||++++|++|||+||+|+|+||
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~v~v~~~~~~~k~~v~v~td~~~~vvl 311 (894)
T PLN02784 232 GQLSNILLKDEGSPSKEQDKSSSELDSAAERKGLKGFYEEMPIVKRVAVDNSVTVTVRKCPETAKNLVYLETDLPGDVVV 311 (894)
T ss_pred ccccchhccCCCCCcccCCCcccccccccccccchhhhhccceeeEEEecceEEEEEecCCCCCceEEEEEcCCCCCEEE
Confidence 99999999999999999998887889999999999999999999999999999999999999999999999999999999
Q ss_pred EeeeccCCCCCcccCCCCCCCCcceeecccccccCccccCCCcceeEEEecCccceeEEEEEcCCccccccCCcceEEeC
Q 003613 318 HWGVCRDDSKNWEIPAEPYPPETIVFKNKALRTLLQPKEGGKGCSRLFTVDEEFAGFLFVLKLNENTWLKCMENDFYIPL 397 (807)
Q Consensus 318 HWgv~~~~~~~W~~Pp~~~~p~~s~~~~~a~eTpf~~~~~~~~~~~~~~l~~~~~g~~FVl~~~~~~W~k~~g~df~i~l 397 (807)
||||||++++||++||++++|+||+++++||||||++.+++.++++.|+|+.+|.||+|||++++++||||+|+||||||
T Consensus 312 HWgV~k~~~~eW~~Pp~~~~P~~sv~~~kA~eT~~~~~~~~~~~~~~~~ld~~~~g~~FVLk~~~g~W~~~~G~DF~Ipl 391 (894)
T PLN02784 312 HWGVCKDGAKTWEIPPEPHPPETSLFKNKALQTMLQQKDDGNGSSGLFSLDGELEGLLFVLKLNEGTWLRCNGNDFYVPL 391 (894)
T ss_pred EeEeccCCCCcccCCCCCCCCCcceecccccccccccccCCCcceEEEecCCCeeEEEEEEECCCCchhhcCCccEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999966999999999999999
Q ss_pred CCCCCCCC---cccccccccCCCcccccccccchhhHHHHHHHhhcccccccchhhcccchhhhhhhhHHhhhhhhhhhh
Q 003613 398 TSSSCLPA---ESVQEMLIPGKAEEATQEVSQTAYTAGIIKEIRNLVSDFSSDISRKTKSKEAQKSILLEIEKLAAEAYS 474 (807)
Q Consensus 398 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~tv~~~~~~~pav~Yq 474 (807)
..+++.++ +.|+|.. ....+++++..+|+++||++||++++|++++++++++.++.|..+++++++++|.+|.
T Consensus 392 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (894)
T PLN02784 392 LTSSSLPTQTEQGQSEGK----TAKTNKEVSKSAYTDGIIGEIRNLVIDISSEKGQKTKTKELQESILQEIEKLAAEAYS 467 (894)
T ss_pred Cchhcccccccccccccc----cccccccccccccccchhhhhHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhhhhhe
Confidence 99988776 4455544 5677889999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccccc-cCCCCCCCCCCCCccceeeeeeeeccCCCCCCcHHHHHHhHHHHHHcCCCEEEECCCCCCC
Q 003613 475 IFRTTAPTFFEEAAVELE-ESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPPPTESV 553 (807)
Q Consensus 475 IFp~~~drF~~~~~~~~~-~~~p~~~~~~~~~~~~~v~~~~F~Wd~~~~GGdl~GI~ekLdYLk~LGvt~I~L~PIfes~ 553 (807)
||++.++.|.+.++.+.+ ..+|+.++..++++.+++++|+|+|+++++|.||++|+++|+||++||||+|||+|++++.
T Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eVmlQgF~Wds~~dg~w~~~I~ekldyL~~LG~taIWLpP~~~s~ 547 (894)
T PLN02784 468 IFRSTIPTFSEESVLEAERIQKPPIKICSGTGSGFEILCQGFNWESHKSGRWYMELGEKAAELSSLGFTVVWLPPPTESV 547 (894)
T ss_pred eeccCCCCcChhhhhcchhhcCCcccccccccCCceEEEEeEEcCcCCCCchHHHHHHHHHHHHHhCCCEEEeCCCCCCC
Confidence 999999999988887755 3568777888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCCccCCCCCCHHHHHHHHHHHHHcCcEEEEeEeecccccccCcCCCcccccCCcCCCCCCcccCCCCCCCC
Q 003613 554 SPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFGGRLNWDDRAVVADDPHFQG 633 (807)
Q Consensus 554 s~hGYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NHtg~d~~~~~~~w~~~~g~~~w~~~~~~~~~~~f~~ 633 (807)
++|||++.|||+||++|||.+||++||++||++||+||+|+|+||++..+.+.++.|..|.+..+|.++..+.+++.|.+
T Consensus 548 s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDiViNH~ag~f~~~~g~~~~f~g~~dW~d~~i~~ddp~F~G 627 (894)
T PLN02784 548 SPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDAVLNHRCAHFQNQNGVWNIFGGRLNWDDRAVVADDPHFQG 627 (894)
T ss_pred CCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEECcccccccccCCCCcccccCCeecCCCCcccCCCcccCC
Confidence 99999999999999999999999999999999999999999999999887766788888888889998888778888998
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCccEEEEccccchhHHHHHHHHHhcCCcEEEeccccCCCccc
Q 003613 634 RGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSYTY 713 (807)
Q Consensus 634 ~~~~~~~~~~~~lpdLn~~np~Vr~~i~~~l~~Wi~e~GVDGfRlDaa~~f~~~~i~~~~~~~~~~~lvGE~w~~~~~~~ 713 (807)
+++++++.++.++||||+.||+||++|.+|++||++++||||||||+|+|||..|+++++++.++.|+|||+|++++|..
T Consensus 628 rG~~~sgddf~~lPDLDh~npeVR~eL~~WlkWL~~e~G~DGfRLDaVKgf~~~Fvkeyv~a~kp~F~VGEyWd~~~~~~ 707 (894)
T PLN02784 628 RGNKSSGDNFHAAPNIDHSQDFVRKDLKEWLCWMRKEVGYDGWRLDFVRGFWGGYVKDYMEASEPYFAVGEYWDSLSYTY 707 (894)
T ss_pred cCCcCcccccCcCCcCCCCCHHHHHHHHHHHHHHHhccCCCEEEEeccCCCCHHHHHHHHhccCCcEEEEEecccccccc
Confidence 89999999999999999999999999999999999899999999999999999999999999888999999999877777
Q ss_pred ccccccchhhHHHHHHHHhhcCCCceecchhhHHHHHHHhhcCchhhhhhccCCCCCCcCcCCCcceecccccCCCCCCC
Q 003613 714 GEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQV 793 (807)
Q Consensus 714 G~~~y~~~~~~~~i~~yl~~~~~~~svfDf~l~~~l~~al~~g~~~~l~~~~g~~~~l~~~~P~~avtFveNHDt~R~~~ 793 (807)
|+++|+|+++++.+.+|++.+++..++|||++++.|..++.+++.|++.+..+..+++++.+|.+|||||+||||++.|+
T Consensus 708 g~~~Ynqd~~rq~l~dwi~~tgg~~saFDfplk~~L~~A~~~~e~wrL~d~~g~~~glv~~~P~~AVTFVDNHDTg~~Q~ 787 (894)
T PLN02784 708 GEMDYNQDAHRQRIVDWINATNGTAGAFDVTTKGILHSALERCEYWRLSDQKGKPPGVVGWWPSRAVTFIENHDTGSTQG 787 (894)
T ss_pred CccccCchhHHHHHHHHHHhCCCceeeechhHHHHHHHHHhccchhhhhhccCCCCCeeccccCceEEEecCCCCCCCcc
Confidence 89999999999999999998888899999999999999998889999999888889999999999999999999999999
Q ss_pred CCccccc-ccccCCC
Q 003613 794 RSSLCST-ISQDFTY 807 (807)
Q Consensus 794 ~~~~~~~-v~~~~~~ 807 (807)
+|.+... +-++|||
T Consensus 788 ~w~~p~~k~~~AYAy 802 (894)
T PLN02784 788 HWRFPEGKEMQGYAY 802 (894)
T ss_pred cCCCCccchhhHHHH
Confidence 9998765 5677776
|
|
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK13840 sucrose phosphorylase; Provisional | Back alignment and domain information |
|---|
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
| >COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >TIGR03852 sucrose_gtfA sucrose phosphorylase | Back alignment and domain information |
|---|
| >KOG0471 consensus Alpha-amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
| >TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type | Back alignment and domain information |
|---|
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase | Back alignment and domain information |
|---|
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
| >KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2212 consensus Alpha-amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK14511 maltooligosyl trehalose synthase; Provisional | Back alignment and domain information |
|---|
| >PLN03244 alpha-amylase; Provisional | Back alignment and domain information |
|---|
| >PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional | Back alignment and domain information |
|---|
| >COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR01531 glyc_debranch glycogen debranching enzymye | Back alignment and domain information |
|---|
| >PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme | Back alignment and domain information |
|---|
| >PF14872 GHL5: Hypothetical glycoside hydrolase 5 | Back alignment and domain information |
|---|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
| >PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >COG1649 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >PF02324 Glyco_hydro_70: Glycosyl hydrolase family 70; InterPro: IPR003318 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase | Back alignment and domain information |
|---|
| >KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PLN02635 disproportionating enzyme | Back alignment and domain information |
|---|
| >cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ | Back alignment and domain information |
|---|
| >PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose | Back alignment and domain information |
|---|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
| >PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A | Back alignment and domain information |
|---|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
| >cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37 | Back alignment and domain information |
|---|
| >PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity | Back alignment and domain information |
|---|
| >cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride | Back alignment and domain information |
|---|
| >PRK14582 pgaB outer membrane N-deacetylase; Provisional | Back alignment and domain information |
|---|
| >cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate | Back alignment and domain information |
|---|
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
| >cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities | Back alignment and domain information |
|---|
| >cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II | Back alignment and domain information |
|---|
| >PRK14508 4-alpha-glucanotransferase; Provisional | Back alignment and domain information |
|---|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK11052 malQ 4-alpha-glucanotransferase; Provisional | Back alignment and domain information |
|---|
| >cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase | Back alignment and domain information |
|---|
| >TIGR00217 malQ 4-alpha-glucanotransferase | Back alignment and domain information |
|---|
| >COG3589 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK10426 alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
| >PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea | Back alignment and domain information |
|---|
| >TIGR01531 glyc_debranch glycogen debranching enzymye | Back alignment and domain information |
|---|
| >PF02446 Glyco_hydro_77: 4-alpha-glucanotransferase; InterPro: IPR003385 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >TIGR01370 cysRS possible cysteinyl-tRNA synthetase, Methanococcus type | Back alignment and domain information |
|---|
| >cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY | Back alignment and domain information |
|---|
| >PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK10658 putative alpha-glucosidase; Provisional | Back alignment and domain information |
|---|
| >COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus | Back alignment and domain information |
|---|
| >cd06542 GH18_EndoS-like Endo-beta-N-acetylglucosaminidases are bacterial chitinases that hydrolyze the chitin core of various asparagine (N)-linked glycans and glycoproteins | Back alignment and domain information |
|---|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase | Back alignment and domain information |
|---|
| >PF03423 CBM_25: Carbohydrate binding domain (family 25); InterPro: IPR005085 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity | Back alignment and domain information |
|---|
| >PLN02763 hydrolase, hydrolyzing O-glycosyl compounds | Back alignment and domain information |
|---|
| >cd02875 GH18_chitobiase Chitobiase (also known as di-N-acetylchitobiase) is a lysosomal glycosidase that hydrolyzes the reducing-end N-acetylglucosamine from the chitobiose core of oligosaccharides during the ordered degradation of asparagine-linked glycoproteins in eukaryotes | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 807 | ||||
| 3bsg_A | 414 | Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant | 7e-77 | ||
| 2qps_A | 405 | "sugar Tongs" Mutant Y380a In Complex With Acarbose | 1e-76 | ||
| 1ht6_A | 405 | Crystal Structure At 1.5a Resolution Of The Barley | 1e-76 | ||
| 2qpu_A | 405 | Sugar Tongs Mutant S378p In Complex With Acarbose L | 2e-76 | ||
| 3bsh_A | 414 | Barley Alpha-Amylase Isozyme 1 (Amy1) Double Mutant | 2e-76 | ||
| 1rp8_A | 405 | Crystal Structure Of Barley Alpha-Amylase Isozyme 1 | 9e-76 | ||
| 1ava_A | 403 | Amy2BASI PROTEIN-Protein Complex From Barley Seed L | 1e-71 | ||
| 1mwo_A | 435 | Crystal Structure Analysis Of The Hyperthermostable | 3e-23 | ||
| 3qgv_A | 435 | Crystal Structure Of A Thermostable Amylase Variant | 1e-22 | ||
| 3bh4_A | 483 | High Resolution Crystal Structure Of Bacillus Amylo | 6e-21 | ||
| 1e3x_A | 483 | Native Structure Of Chimaeric Amylase From B. Amylo | 2e-19 | ||
| 1gcy_A | 527 | High Resolution Crystal Structure Of Maltotetraose- | 1e-18 | ||
| 2amg_A | 418 | Structure Of Hydrolase (Glycosidase) Length = 418 | 3e-18 | ||
| 1jda_A | 429 | Maltotetraose-Forming Exo-Amylase Length = 429 | 6e-18 | ||
| 1qi3_A | 429 | Mutant (D193n) Maltotetraose-Forming Exo-Amylase In | 1e-17 | ||
| 1qi5_A | 429 | Mutant (D294n) Maltotetraose-Forming Exo-Amylase In | 1e-17 | ||
| 1qi4_A | 429 | Mutant (e219g) Maltotetraose-forming Exo-amylase In | 2e-17 | ||
| 1qpk_A | 418 | Mutant (D193g) Maltotetraose-Forming Exo-Amylase In | 2e-17 | ||
| 1bli_A | 483 | Bacillus Licheniformis Alpha-Amylase Length = 483 | 1e-16 | ||
| 1ob0_A | 483 | Kinetic Stabilization Of Bacillus Licheniformis-Amy | 2e-16 | ||
| 1vjs_A | 483 | Structure Of Alpha-Amylase Precursor Length = 483 | 3e-16 | ||
| 1ud2_A | 480 | Crystal Structure Of Calcium-Free Alpha-Amylase Fro | 3e-15 | ||
| 1ud3_A | 480 | Crystal Structure Of Amyk38 N289h Mutant Length = 4 | 3e-15 | ||
| 2die_A | 485 | Alkaline Alpha-Amylase Amyk From Bacillus Sp. Ksm-1 | 1e-14 | ||
| 1hvx_A | 515 | Bacillus Stearothermophilus Alpha-Amylase Length = | 1e-14 | ||
| 3bc9_A | 599 | Alpha-Amylase B In Complex With Acarbose Length = 5 | 6e-14 | ||
| 2guy_A | 478 | Orthorhombic Crystal Structure (Space Group P21212) | 1e-11 | ||
| 1w9x_A | 481 | Bacillus Halmapalus Alpha Amylase Length = 481 | 1e-11 | ||
| 2gjp_A | 485 | Structure Of Bacillus Halmapalus Alpha-Amylase, Cry | 2e-11 | ||
| 2taa_A | 478 | Structure And Possible Catalytic Residues Of Taka-A | 2e-11 | ||
| 1wp6_A | 485 | Crystal Structure Of Maltohexaose-producing Amylase | 6e-11 | ||
| 2aaa_A | 484 | Calcium Binding In Alpha-Amylases: An X-Ray Diffrac | 9e-10 | ||
| 3old_A | 496 | Crystal Structure Of Alpha-Amylase In Complex With | 2e-09 | ||
| 1b2y_A | 496 | Structure Of Human Pancreatic Alpha-Amylase In Comp | 2e-09 | ||
| 1kgw_A | 496 | Three Dimensional Structure Analysis Of The R337q V | 3e-09 | ||
| 1kbb_A | 496 | Mechanistic Analyses Of Catalysis In Human Pancreat | 3e-09 | ||
| 1kgu_A | 496 | Three Dimensional Structure Analysis Of The R337a V | 3e-09 | ||
| 2cpu_A | 496 | Subsite Mapping Of The Active Site Of Human Pancrea | 3e-09 | ||
| 1xgz_A | 496 | Structure Of The N298s Variant Of Human Pancreatic | 3e-09 | ||
| 1cpu_A | 496 | Subsite Mapping Of The Active Site Of Human Pancrea | 3e-09 | ||
| 1kgx_A | 496 | Three Dimensional Structure Analysis Of The R195q V | 1e-08 | ||
| 1kb3_A | 496 | Three Dimensional Structure Analysis Of The R195a V | 2e-08 | ||
| 1kbk_A | 496 | Mechanistic Analyses Of Catalysis In Human Pancreat | 2e-08 | ||
| 1nm9_A | 496 | Crystal Structure Of Recombinant Human Salivary Amy | 3e-08 | ||
| 3blk_A | 496 | Role Of Aromatic Residues In Starch Binding Length | 3e-08 | ||
| 3blp_X | 496 | Role Of Aromatic Residues In Human Salivary Alpha-A | 3e-08 | ||
| 1jxj_A | 496 | Role Of Mobile Loop In The Mechanism Of Human Saliv | 3e-08 | ||
| 1jxk_A | 491 | Role Of Ethe Mobile Loop In The Mehanism Of Human S | 4e-08 | ||
| 1c8q_A | 496 | Structure Solution And Refinement Of The Recombinan | 4e-08 | ||
| 1q4n_X | 496 | Structural Studies Of Phe256trp Of Human Salivary A | 5e-08 | ||
| 1lwh_A | 441 | Crystal Structure Of T. Maritima 4-Alpha-Glucanotra | 6e-08 | ||
| 1z32_X | 496 | Structure-Function Relationships In Human Salivary | 9e-08 | ||
| 3dhp_A | 496 | Probing The Role Of Aromatic Residues At The Second | 1e-07 | ||
| 1bpl_A | 189 | Glycosyltransferase Length = 189 | 1e-07 | ||
| 1ea9_C | 583 | Cyclomaltodextrinase Length = 583 | 3e-07 | ||
| 1bpl_B | 294 | Glycosyltransferase Length = 294 | 9e-07 | ||
| 1bvn_P | 496 | Pig Pancreatic Alpha-Amylase In Complex With The Pr | 2e-06 | ||
| 1j0h_A | 588 | Crystal Structure Of Bacillus Stearothermophilus Ne | 2e-06 | ||
| 1ppi_A | 496 | The Active Center Of A Mammalian Alpha-Amylase. The | 2e-06 | ||
| 1pez_A | 686 | Bacillus Circulans Strain 251 Mutant A230v Length = | 3e-06 | ||
| 1jfh_A | 496 | Structure Of A Pancreatic Alpha-Amylase Bound To A | 3e-06 | ||
| 1dhk_A | 496 | Structure Of Porcine Pancreatic Alpha-Amylase Lengt | 3e-06 | ||
| 1pj9_A | 686 | Bacillus Circulans Strain 251 Loop Mutant 183-195 L | 3e-06 | ||
| 1pif_A | 496 | Pig Alpha-amylase Length = 496 | 3e-06 | ||
| 1kck_A | 686 | Bacillus Circulans Strain 251 Cyclodextrin Glycosyl | 3e-06 | ||
| 1tcm_A | 686 | Cyclodextrin Glycosyltransferase W616a Mutant From | 3e-06 | ||
| 1vah_A | 496 | Crystal Structure Of The Pig Pancreatic-Amylase Com | 3e-06 | ||
| 1kxq_A | 496 | Camelid Vhh Domain In Complex With Porcine Pancreat | 3e-06 | ||
| 1ua3_A | 496 | Crystal Structure Of The Pig Pancreatic A-Amylase C | 3e-06 | ||
| 1cdg_A | 686 | Nucleotide Sequence And X-Ray Structure Of Cyclodex | 3e-06 | ||
| 1j0j_A | 588 | Crystal Structure Of Neopullulanase E357q Complex W | 4e-06 | ||
| 1ose_A | 496 | Porcine Pancreatic Alpha-Amylase Complexed With Aca | 4e-06 | ||
| 1hx0_A | 496 | Structure Of Pig Pancreatic Alpha-Amylase Complexed | 4e-06 | ||
| 3l2l_A | 496 | X-Ray Crystallographic Analysis Of Pig Pancreatic A | 4e-06 | ||
| 1dtu_A | 686 | Bacillus Circulans Strain 251 Cyclodextrin Glycosyl | 5e-06 | ||
| 1cxl_A | 686 | Complex Between A Covalent Intermediate And Bacillu | 6e-06 | ||
| 1cgt_A | 684 | Structure Of Cyclodextrin Glycosyltransferase Refin | 7e-06 | ||
| 4cgt_A | 678 | Deletion Mutant Delta(145-150), F151d Of Cyclodextr | 7e-06 | ||
| 1cgv_A | 686 | Site Directed Mutations Of The Active Site Residue | 7e-06 | ||
| 1cgw_A | 686 | Site Directed Mutations Of The Active Site Residue | 8e-06 | ||
| 1qho_A | 686 | Five-Domain Alpha-Amylase From Bacillus Stearotherm | 9e-06 | ||
| 1ot2_A | 686 | Bacillus Circulans Strain 251 Cyclodextrin Glycosyl | 1e-05 | ||
| 1cgx_A | 686 | Site Directed Mutations Of The Active Site Residue | 1e-05 | ||
| 3vm5_A | 505 | Recombinant Medaka Fish Alpha-Amylase Expressed In | 1e-05 | ||
| 1cgy_A | 686 | Site Directed Mutations Of The Active Site Residue | 1e-05 | ||
| 6cgt_A | 684 | Hoxa Complex Of Cyclodextrin Glycosyltransferase Mu | 1e-05 | ||
| 1d7f_A | 686 | Crystal Structure Of Asparagine 233-Replaced Cyclod | 1e-05 | ||
| 1v3k_A | 686 | Crystal Structure Of F283y Mutant Cyclodextrin Glyc | 2e-05 | ||
| 1v3j_A | 686 | Crystal Structure Of F283l Mutant Cyclodextrin Glyc | 2e-05 | ||
| 1sma_A | 588 | Crystal Structure Of A Maltogenic Amylase Length = | 2e-05 | ||
| 1cxk_A | 686 | Complex Between A Maltononaose Substrate And Bacill | 2e-05 | ||
| 1pam_A | 686 | Cyclodextrin Glucanotransferase Length = 686 | 2e-05 | ||
| 1ot1_A | 686 | Bacillus Circulans Strain 251 Cyclodextrin Glycosyl | 2e-05 | ||
| 1kcl_A | 686 | Bacillus Ciruclans Strain 251 Cyclodextrin Glycosyl | 2e-05 | ||
| 1uks_A | 686 | Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN | 2e-05 | ||
| 2wc7_A | 488 | Crystal Structure Of Nostoc Punctiforme Debranching | 3e-05 | ||
| 8cgt_A | 684 | Structure Of Cyclodextrin Glycosyltransferase Compl | 3e-05 | ||
| 3bmv_A | 683 | Cyclodextrin Glycosyl Transferase From Thermoanerob | 3e-05 | ||
| 1jf5_A | 585 | Crystal Structure Of Thermoactinomyces Vulgaris R-4 | 4e-05 | ||
| 1cgu_A | 684 | Catalytic Center Of Cyclodextrin Glycosyltransferas | 5e-05 | ||
| 1eo5_A | 686 | Bacillus Circulans Strain 251 Cyclodextrin Glycosyl | 1e-04 | ||
| 3ede_A | 601 | Structural Base For Cyclodextrin Hydrolysis Length | 1e-04 | ||
| 2ze0_A | 555 | Alpha-glucosidase Gsj Length = 555 | 1e-04 | ||
| 1gvi_A | 588 | Thermus Maltogenic Amylase In Complex With Beta-Cd | 1e-04 | ||
| 1wza_A | 488 | Crystal Structure Of Alpha-Amylase From H.Orenii Le | 2e-04 | ||
| 1uok_A | 558 | Crystal Structure Of B. Cereus Oligo-1,6-Glucosidas | 2e-04 | ||
| 1bvz_A | 585 | Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vul | 2e-04 | ||
| 1ukt_A | 686 | Crystal Structure Of Y100l Mutant Cyclodextrin Gluc | 2e-04 | ||
| 1wzm_A | 585 | Thermoactinomyces Vulgaris R-47 Alpha-amylase Ii (t | 2e-04 | ||
| 1wzl_A | 585 | Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (T | 2e-04 | ||
| 1wzk_A | 585 | Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (T | 2e-04 | ||
| 1jf6_A | 585 | Crystal Structure Of Thermoactinomyces Vulgaris R-4 | 2e-04 | ||
| 1bf2_A | 750 | Structure Of Pseudomonas Isoamylase Length = 750 | 2e-04 | ||
| 3edd_A | 601 | Structural Base For Cyclodextrin Hydrolysis Length | 2e-04 | ||
| 3edf_A | 601 | Structural Base For Cyclodextrin Hydrolysis Length | 3e-04 | ||
| 1a47_A | 683 | Cgtase From Thermoanaerobacterium Thermosulfurigene | 3e-04 | ||
| 4gkl_A | 422 | Crystal Structure Of A Noncanonic Maltogenic Alpha- | 4e-04 | ||
| 3gbd_A | 558 | Crystal Structure Of The Isomaltulose Synthase Smua | 4e-04 | ||
| 3dhu_A | 449 | Crystal Structure Of An Alpha-Amylase From Lactobac | 4e-04 | ||
| 1cyg_A | 680 | Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgt | 5e-04 | ||
| 1vfm_A | 585 | Crystal Structure Of Thermoactinomyces Vulgaris R-4 | 6e-04 | ||
| 1jl8_A | 585 | Complex Of Alpha-Amylase Ii (Tva Ii) From Thermoact | 6e-04 | ||
| 1g1y_A | 585 | Crystal Structure Of Alpha-Amylase Ii (Tvaii) From | 8e-04 | ||
| 1h3g_A | 601 | Cyclomaltodextrinase From Flavobacterium Sp. No. 92 | 8e-04 |
| >pdb|3BSG|A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) H395a Mutant Length = 414 | Back alignment and structure |
|
| >pdb|2QPS|A Chain A, "sugar Tongs" Mutant Y380a In Complex With Acarbose Length = 405 | Back alignment and structure |
| >pdb|1HT6|A Chain A, Crystal Structure At 1.5a Resolution Of The Barley Alpha- Amylase Isozyme 1 Length = 405 | Back alignment and structure |
| >pdb|2QPU|A Chain A, Sugar Tongs Mutant S378p In Complex With Acarbose Length = 405 | Back alignment and structure |
| >pdb|3BSH|A Chain A, Barley Alpha-Amylase Isozyme 1 (Amy1) Double Mutant Y105aY380A IN COMPLEX WITH INHIBITOR ACARBOSE Length = 414 | Back alignment and structure |
| >pdb|1RP8|A Chain A, Crystal Structure Of Barley Alpha-Amylase Isozyme 1 (Amy1) Inactive Mutant D180a In Complex With Maltoheptaose Length = 405 | Back alignment and structure |
| >pdb|1AVA|A Chain A, Amy2BASI PROTEIN-Protein Complex From Barley Seed Length = 403 | Back alignment and structure |
| >pdb|1MWO|A Chain A, Crystal Structure Analysis Of The Hyperthermostable Pyrocoocus Woesei Alpha-Amylase Length = 435 | Back alignment and structure |
| >pdb|3QGV|A Chain A, Crystal Structure Of A Thermostable Amylase Variant Length = 435 | Back alignment and structure |
| >pdb|3BH4|A Chain A, High Resolution Crystal Structure Of Bacillus Amyloliquefaciens Alpha-Amylase Length = 483 | Back alignment and structure |
| >pdb|1E3X|A Chain A, Native Structure Of Chimaeric Amylase From B. Amyloliquefaciens And B. Licheniformis At 1.92a Length = 483 | Back alignment and structure |
| >pdb|1GCY|A Chain A, High Resolution Crystal Structure Of Maltotetraose-Forming Exo-Amylase Length = 527 | Back alignment and structure |
| >pdb|2AMG|A Chain A, Structure Of Hydrolase (Glycosidase) Length = 418 | Back alignment and structure |
| >pdb|1JDA|A Chain A, Maltotetraose-Forming Exo-Amylase Length = 429 | Back alignment and structure |
| >pdb|1QI3|A Chain A, Mutant (D193n) Maltotetraose-Forming Exo-Amylase In Complex With Maltotetraose Length = 429 | Back alignment and structure |
| >pdb|1QI5|A Chain A, Mutant (D294n) Maltotetraose-Forming Exo-Amylase In Complex With Maltotetraose Length = 429 | Back alignment and structure |
| >pdb|1QI4|A Chain A, Mutant (e219g) Maltotetraose-forming Exo-amylase In Complex With Maltotetraose Length = 429 | Back alignment and structure |
| >pdb|1QPK|A Chain A, Mutant (D193g) Maltotetraose-Forming Exo-Amylase In Complex With Maltotetraose Length = 418 | Back alignment and structure |
| >pdb|1BLI|A Chain A, Bacillus Licheniformis Alpha-Amylase Length = 483 | Back alignment and structure |
| >pdb|1OB0|A Chain A, Kinetic Stabilization Of Bacillus Licheniformis-Amylase Through Introduction Of Hydrophobic Residues At The Surface Length = 483 | Back alignment and structure |
| >pdb|1VJS|A Chain A, Structure Of Alpha-Amylase Precursor Length = 483 | Back alignment and structure |
| >pdb|1UD2|A Chain A, Crystal Structure Of Calcium-Free Alpha-Amylase From Bacillus Sp. Strain Ksm-K38 (Amyk38) Length = 480 | Back alignment and structure |
| >pdb|1UD3|A Chain A, Crystal Structure Of Amyk38 N289h Mutant Length = 480 | Back alignment and structure |
| >pdb|2DIE|A Chain A, Alkaline Alpha-Amylase Amyk From Bacillus Sp. Ksm-1378 Length = 485 | Back alignment and structure |
| >pdb|1HVX|A Chain A, Bacillus Stearothermophilus Alpha-Amylase Length = 515 | Back alignment and structure |
| >pdb|3BC9|A Chain A, Alpha-Amylase B In Complex With Acarbose Length = 599 | Back alignment and structure |
| >pdb|2GUY|A Chain A, Orthorhombic Crystal Structure (Space Group P21212) Of Aspergillus Niger Alpha-Amylase At 1.6 A Resolution Length = 478 | Back alignment and structure |
| >pdb|1W9X|A Chain A, Bacillus Halmapalus Alpha Amylase Length = 481 | Back alignment and structure |
| >pdb|2GJP|A Chain A, Structure Of Bacillus Halmapalus Alpha-Amylase, Crystallized With The Substrate Analogue Acarbose And Maltose Length = 485 | Back alignment and structure |
| >pdb|2TAA|A Chain A, Structure And Possible Catalytic Residues Of Taka-Amylase A Length = 478 | Back alignment and structure |
| >pdb|1WP6|A Chain A, Crystal Structure Of Maltohexaose-producing Amylase From Alkalophilic Bacillus Sp.707. Length = 485 | Back alignment and structure |
| >pdb|2AAA|A Chain A, Calcium Binding In Alpha-Amylases: An X-Ray Diffraction Study At 2.1 Angstroms Resolution Of Two Enzymes From Aspergillus Length = 484 | Back alignment and structure |
| >pdb|3OLD|A Chain A, Crystal Structure Of Alpha-Amylase In Complex With Acarviostatin I03 Length = 496 | Back alignment and structure |
| >pdb|1B2Y|A Chain A, Structure Of Human Pancreatic Alpha-Amylase In Complex With The Carbohydrate Inhibitor Acarbose Length = 496 | Back alignment and structure |
| >pdb|1KGW|A Chain A, Three Dimensional Structure Analysis Of The R337q Variant Of Human Pancreatic Alpha-Mylase Length = 496 | Back alignment and structure |
| >pdb|1KBB|A Chain A, Mechanistic Analyses Of Catalysis In Human Pancreatic Alpha- Amylase: Detailed Kinetic And Structural Studies Of Mutants Of Three Conserved Carboxylic Acids Length = 496 | Back alignment and structure |
| >pdb|1KGU|A Chain A, Three Dimensional Structure Analysis Of The R337a Variant Of Human Pancreatic Alpha-Amylase Length = 496 | Back alignment and structure |
| >pdb|2CPU|A Chain A, Subsite Mapping Of The Active Site Of Human Pancreatic Alpha-Amylase Using Substrates, The Pharmacological Inhibitor Acarbose, And An Active Site Variant Length = 496 | Back alignment and structure |
| >pdb|1XGZ|A Chain A, Structure Of The N298s Variant Of Human Pancreatic Alpha-Amylase Length = 496 | Back alignment and structure |
| >pdb|1CPU|A Chain A, Subsite Mapping Of The Active Site Of Human Pancreatic Alpha-Amylase Using Substrates, The Pharmacological Inhibitor Acarbose, And An Active Site Variant Length = 496 | Back alignment and structure |
| >pdb|1KGX|A Chain A, Three Dimensional Structure Analysis Of The R195q Variant Of Human Pancreatic Alpha Amylase Length = 496 | Back alignment and structure |
| >pdb|1KB3|A Chain A, Three Dimensional Structure Analysis Of The R195a Variant Of Human Pancreatic Alpha Amylase Length = 496 | Back alignment and structure |
| >pdb|1KBK|A Chain A, Mechanistic Analyses Of Catalysis In Human Pancreatic Alpha-amylase: Detailed Kinetic And Structural Studies Of Mutants Of Three Conserved Carboxylic Acids Length = 496 | Back alignment and structure |
| >pdb|1NM9|A Chain A, Crystal Structure Of Recombinant Human Salivary Amylase Mutant W58a Length = 496 | Back alignment and structure |
| >pdb|3BLK|A Chain A, Role Of Aromatic Residues In Starch Binding Length = 496 | Back alignment and structure |
| >pdb|3BLP|X Chain X, Role Of Aromatic Residues In Human Salivary Alpha-Amylase Length = 496 | Back alignment and structure |
| >pdb|1JXJ|A Chain A, Role Of Mobile Loop In The Mechanism Of Human Salivary Amylase Length = 496 | Back alignment and structure |
| >pdb|1JXK|A Chain A, Role Of Ethe Mobile Loop In The Mehanism Of Human Salivary Amylase Length = 491 | Back alignment and structure |
| >pdb|1C8Q|A Chain A, Structure Solution And Refinement Of The Recombinant Human Salivary Amylase Length = 496 | Back alignment and structure |
| >pdb|1Q4N|X Chain X, Structural Studies Of Phe256trp Of Human Salivary Alpha- Amylase: Implications For The Role Of A Conserved Water Molecule And Its Associated Chain In Enzyme Activity Length = 496 | Back alignment and structure |
| >pdb|1LWH|A Chain A, Crystal Structure Of T. Maritima 4-Alpha-Glucanotransferase Length = 441 | Back alignment and structure |
| >pdb|1Z32|X Chain X, Structure-Function Relationships In Human Salivary Alpha- Amylase: Role Of Aromatic Residues Length = 496 | Back alignment and structure |
| >pdb|3DHP|A Chain A, Probing The Role Of Aromatic Residues At The Secondary Saccharide Binding Sites Of Human Salivary Alpha-Amylase In Substrate Hydrolysis And Bacterial Binding Length = 496 | Back alignment and structure |
| >pdb|1BPL|A Chain A, Glycosyltransferase Length = 189 | Back alignment and structure |
| >pdb|1EA9|C Chain C, Cyclomaltodextrinase Length = 583 | Back alignment and structure |
| >pdb|1BPL|B Chain B, Glycosyltransferase Length = 294 | Back alignment and structure |
| >pdb|1BVN|P Chain P, Pig Pancreatic Alpha-Amylase In Complex With The Proteinaceous Inhibitor Tendamistat Length = 496 | Back alignment and structure |
| >pdb|1J0H|A Chain A, Crystal Structure Of Bacillus Stearothermophilus Neopullulanase Length = 588 | Back alignment and structure |
| >pdb|1PPI|A Chain A, The Active Center Of A Mammalian Alpha-Amylase. The Structure Of The Complex Of A Pancreatic Alpha-Amylase With A Carbohydrate Inhibitor Refined To 2.2 Angstroms Resolution Length = 496 | Back alignment and structure |
| >pdb|1PEZ|A Chain A, Bacillus Circulans Strain 251 Mutant A230v Length = 686 | Back alignment and structure |
| >pdb|1JFH|A Chain A, Structure Of A Pancreatic Alpha-Amylase Bound To A Substrate Analogue At 2.03 Angstrom Resolution Length = 496 | Back alignment and structure |
| >pdb|1DHK|A Chain A, Structure Of Porcine Pancreatic Alpha-Amylase Length = 496 | Back alignment and structure |
| >pdb|1PJ9|A Chain A, Bacillus Circulans Strain 251 Loop Mutant 183-195 Length = 686 | Back alignment and structure |
| >pdb|1PIF|A Chain A, Pig Alpha-amylase Length = 496 | Back alignment and structure |
| >pdb|1KCK|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl Transferase Mutant N193g Length = 686 | Back alignment and structure |
| >pdb|1TCM|A Chain A, Cyclodextrin Glycosyltransferase W616a Mutant From Bacillus Circulans Strain 251 Length = 686 | Back alignment and structure |
| >pdb|1VAH|A Chain A, Crystal Structure Of The Pig Pancreatic-Amylase Complexed With R-Nitrophenyl-A-D-Maltoside Length = 496 | Back alignment and structure |
| >pdb|1KXQ|A Chain A, Camelid Vhh Domain In Complex With Porcine Pancreatic Alpha- Amylase Length = 496 | Back alignment and structure |
| >pdb|1UA3|A Chain A, Crystal Structure Of The Pig Pancreatic A-Amylase Complexed With Malto-Oligosaccharides Length = 496 | Back alignment and structure |
| >pdb|1CDG|A Chain A, Nucleotide Sequence And X-Ray Structure Of Cyclodextrin Glycosyltransferase From Bacillus Circulans Strain 251 In A Maltose-Dependent Crystal Form Length = 686 | Back alignment and structure |
| >pdb|1J0J|A Chain A, Crystal Structure Of Neopullulanase E357q Complex With Maltotetraose Length = 588 | Back alignment and structure |
| >pdb|1OSE|A Chain A, Porcine Pancreatic Alpha-Amylase Complexed With Acarbose Length = 496 | Back alignment and structure |
| >pdb|1HX0|A Chain A, Structure Of Pig Pancreatic Alpha-Amylase Complexed With The "truncate" Acarbose Molecule (Pseudotrisaccharide) Length = 496 | Back alignment and structure |
| >pdb|3L2L|A Chain A, X-Ray Crystallographic Analysis Of Pig Pancreatic Alpha-Amylase With Limit Dextrin And Oligosaccharide Length = 496 | Back alignment and structure |
| >pdb|1DTU|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyltransferase: A Mutant Y89dS146P COMPLEXED TO AN Hexasaccharide Inhibitor Length = 686 | Back alignment and structure |
| >pdb|1CXL|A Chain A, Complex Between A Covalent Intermediate And Bacillus Circulans Strain 251 Cgtase E257q Length = 686 | Back alignment and structure |
| >pdb|1CGT|A Chain A, Structure Of Cyclodextrin Glycosyltransferase Refined At 2.0 Angstroms Resolution Length = 684 | Back alignment and structure |
| >pdb|4CGT|A Chain A, Deletion Mutant Delta(145-150), F151d Of Cyclodextrin Glycosyltransferase Length = 678 | Back alignment and structure |
| >pdb|1CGV|A Chain A, Site Directed Mutations Of The Active Site Residue Tyrosine 195 Of Cyclodextrin Glycosyltransferase From Bacillus Circulans Strain 251 Affecting Activity And Product Specificity Length = 686 | Back alignment and structure |
| >pdb|1CGW|A Chain A, Site Directed Mutations Of The Active Site Residue Tyrosine 195 Of Cyclodextrin Glycosyltransferase From Bacillus Circulans Strain 251 Affecting Activity And Product Specificity Length = 686 | Back alignment and structure |
| >pdb|1QHO|A Chain A, Five-Domain Alpha-Amylase From Bacillus Stearothermophilus, MaltoseACARBOSE COMPLEX Length = 686 | Back alignment and structure |
| >pdb|1OT2|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl Transferase Mutant D135n Length = 686 | Back alignment and structure |
| >pdb|1CGX|A Chain A, Site Directed Mutations Of The Active Site Residue Tyrosine 195 Of Cyclodextrin Glyxosyltransferase From Bacillus Circulans Strain 251 Affecting Activity And Product Specificity Length = 686 | Back alignment and structure |
| >pdb|3VM5|A Chain A, Recombinant Medaka Fish Alpha-Amylase Expressed In Yeast Pichia Pastoris Length = 505 | Back alignment and structure |
| >pdb|1CGY|A Chain A, Site Directed Mutations Of The Active Site Residue Tyrosine 195 Of Cyclodextrin Glyxosyltransferase From Bacillus Circulans Strain 251 Affecting Activity And Product Specificity Length = 686 | Back alignment and structure |
| >pdb|6CGT|A Chain A, Hoxa Complex Of Cyclodextrin Glycosyltransferase Mutant Length = 684 | Back alignment and structure |
| >pdb|1D7F|A Chain A, Crystal Structure Of Asparagine 233-Replaced Cyclodextrin Glucanotransferase From Alkalophilic Bacillus Sp. 1011 Determined At 1.9 A Resolution Length = 686 | Back alignment and structure |
| >pdb|1V3K|A Chain A, Crystal Structure Of F283y Mutant Cyclodextrin Glycosyltransferase Length = 686 | Back alignment and structure |
| >pdb|1V3J|A Chain A, Crystal Structure Of F283l Mutant Cyclodextrin Glycosyltransferase Length = 686 | Back alignment and structure |
| >pdb|1SMA|A Chain A, Crystal Structure Of A Maltogenic Amylase Length = 588 | Back alignment and structure |
| >pdb|1CXK|A Chain A, Complex Between A Maltononaose Substrate And Bacillus Circulans Strain 251 Cgtase E257qD229N Length = 686 | Back alignment and structure |
| >pdb|1PAM|A Chain A, Cyclodextrin Glucanotransferase Length = 686 | Back alignment and structure |
| >pdb|1OT1|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyl Transferase Mutant D135a Length = 686 | Back alignment and structure |
| >pdb|1KCL|A Chain A, Bacillus Ciruclans Strain 251 Cyclodextrin Glycosyl Transferase Mutant G179l Length = 686 | Back alignment and structure |
| >pdb|1UKS|A Chain A, Crystal Structure Of F183lF259L MUTANT CYCLODEXTRIN Glucanotransferase Complexed With A Pseudo-Maltotetraose Derived From Acarbose Length = 686 | Back alignment and structure |
| >pdb|2WC7|A Chain A, Crystal Structure Of Nostoc Punctiforme Debranching Enzyme( Npde)(Acarbose Soaked) Length = 488 | Back alignment and structure |
| >pdb|8CGT|A Chain A, Structure Of Cyclodextrin Glycosyltransferase Complexed With A Thio-Maltohexaose Length = 684 | Back alignment and structure |
| >pdb|3BMV|A Chain A, Cyclodextrin Glycosyl Transferase From Thermoanerobacterium Thermosulfurigenes Em1 Mutant S77p Length = 683 | Back alignment and structure |
| >pdb|1JF5|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase 2 Mutant F286a Length = 585 | Back alignment and structure |
| >pdb|1CGU|A Chain A, Catalytic Center Of Cyclodextrin Glycosyltransferase Derived From X-Ray Structure Analysis Combined With Site- Directed Mutagenesis Length = 684 | Back alignment and structure |
| >pdb|1EO5|A Chain A, Bacillus Circulans Strain 251 Cyclodextrin Glycosyltransferase In Complex With Maltoheptaose Length = 686 | Back alignment and structure |
| >pdb|3EDE|A Chain A, Structural Base For Cyclodextrin Hydrolysis Length = 601 | Back alignment and structure |
| >pdb|2ZE0|A Chain A, Alpha-glucosidase Gsj Length = 555 | Back alignment and structure |
| >pdb|1GVI|A Chain A, Thermus Maltogenic Amylase In Complex With Beta-Cd Length = 588 | Back alignment and structure |
| >pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii Length = 488 | Back alignment and structure |
| >pdb|1UOK|A Chain A, Crystal Structure Of B. Cereus Oligo-1,6-Glucosidase Length = 558 | Back alignment and structure |
| >pdb|1BVZ|A Chain A, Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vulgaris R- 47 Length = 585 | Back alignment and structure |
| >pdb|1UKT|A Chain A, Crystal Structure Of Y100l Mutant Cyclodextrin Glucanotransferase Compexed With An Acarbose Length = 686 | Back alignment and structure |
| >pdb|1WZM|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-amylase Ii (tva Ii) Mutatnt R469k Length = 585 | Back alignment and structure |
| >pdb|1WZL|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (Tva Ii) Mutatnt R469l Length = 585 | Back alignment and structure |
| >pdb|1WZK|A Chain A, Thermoactinomyces Vulgaris R-47 Alpha-Amylase Ii (Tva Ii) Mutatnt D465n Length = 585 | Back alignment and structure |
| >pdb|1JF6|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase Mutant F286y Length = 585 | Back alignment and structure |
| >pdb|1BF2|A Chain A, Structure Of Pseudomonas Isoamylase Length = 750 | Back alignment and structure |
| >pdb|3EDD|A Chain A, Structural Base For Cyclodextrin Hydrolysis Length = 601 | Back alignment and structure |
| >pdb|3EDF|A Chain A, Structural Base For Cyclodextrin Hydrolysis Length = 601 | Back alignment and structure |
| >pdb|1A47|A Chain A, Cgtase From Thermoanaerobacterium Thermosulfurigenes Em1 In Complex With A Maltohexaose Inhibitor Length = 683 | Back alignment and structure |
| >pdb|4GKL|A Chain A, Crystal Structure Of A Noncanonic Maltogenic Alpha-amylase Amyb From Thermotoga Neapolitana Length = 422 | Back alignment and structure |
| >pdb|3GBD|A Chain A, Crystal Structure Of The Isomaltulose Synthase Smua From Protaminobacter Rubrum Length = 558 | Back alignment and structure |
| >pdb|3DHU|A Chain A, Crystal Structure Of An Alpha-Amylase From Lactobacillus Plantarum Length = 449 | Back alignment and structure |
| >pdb|1CYG|A Chain A, Cyclodextrin Glucanotransferase (E.C.2.4.1.19) (Cgtase) Length = 680 | Back alignment and structure |
| >pdb|1VFM|A Chain A, Crystal Structure Of Thermoactinomyces Vulgaris R-47 Alpha- Amylase 2ALPHA-Cyclodextrin Complex Length = 585 | Back alignment and structure |
| >pdb|1JL8|A Chain A, Complex Of Alpha-Amylase Ii (Tva Ii) From Thermoactinomyces Vulgaris R-47 With Beta-Cyclodextrin Based On A Co- Crystallization With Methyl Beta-Cyclodextrin Length = 585 | Back alignment and structure |
| >pdb|1G1Y|A Chain A, Crystal Structure Of Alpha-Amylase Ii (Tvaii) From Thermoactinomyces Vulgaris R-47 And Beta-Cyclodextrin Complex Length = 585 | Back alignment and structure |
| >pdb|1H3G|A Chain A, Cyclomaltodextrinase From Flavobacterium Sp. No. 92: From Dna Sequence To Protein Structure Length = 601 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* Length = 405 | Back alignment and structure |
|---|
Score = 318 bits (818), Expect = e-101
Identities = 137/309 (44%), Positives = 204/309 (66%), Gaps = 16/309 (5%)
Query: 509 EILCQGFNWESHK-SGRWYMELKEKATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNL- 566
++L QGFNWES K SG WY + K ++++ G + +WLPPP+ SVS EGYMP LY++
Sbjct: 2 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDID 61
Query: 567 SSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIF-----GGRLNWDD 621
+S+YGN ELK ++ H G++ + D+V+NHRCA Y++ G++ IF GRL+W
Sbjct: 62 ASKYGNAAELKSLIGALHGKGVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGP 121
Query: 622 RAVVADDPHFQ-GRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDF 680
+ DD + G N +G +F AAP+IDH D V++++KEWL WL++++G+D WRLDF
Sbjct: 122 HMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
Query: 681 VRGFWGGYVKDYLEATEPYFAVGEYWDSLSYTY-GEMDHNQDAHRQRIIDWINAASG--- 736
RG+ K Y++ T P AV E WD+++ G+ +++QDAHRQ +++W++ G
Sbjct: 182 ARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 241
Query: 737 TAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQVRSS 796
FD TTKGIL++A++ E WRL D +GK PGV+GWWP++AVTF++NHDTGSTQ +
Sbjct: 242 AGMVFDFTTKGILNAAVEG-ELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQ---A 297
Query: 797 LCSTISQDF 805
+ S
Sbjct: 298 MWPFPSDKV 306
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* Length = 527 | Back alignment and structure |
|---|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* Length = 435 | Back alignment and structure |
|---|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A Length = 599 | Back alignment and structure |
|---|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A Length = 480 | Back alignment and structure |
|---|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* Length = 485 | Back alignment and structure |
|---|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A Length = 483 | Back alignment and structure |
|---|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 Length = 515 | Back alignment and structure |
|---|
| >1hx0_A Alpha amylase (PPA); inhibitor, carbohydrate, pancreas, hydrolase; HET: GLC AC1 BGC MAL; 1.38A {Sus scrofa} SCOP: b.71.1.1 c.1.8.1 PDB: 1wo2_A* 1ua3_A* 1kxq_A 1kxt_A 1kxv_A 1jfh_A* 1vah_A* 1ppi_A* 3l2m_A* 3l2l_A* 1dhk_A* 1ose_A* 1pig_A* 1pif_A* 1bvn_P 3oli_A* 3old_A* 3olg_A* 3ole_A* 3ij8_A* ... Length = 496 | Back alignment and structure |
|---|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* Length = 448 | Back alignment and structure |
|---|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 Length = 484 | Back alignment and structure |
|---|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A Length = 422 | Back alignment and structure |
|---|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A Length = 601 | Back alignment and structure |
|---|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... Length = 686 | Back alignment and structure |
|---|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A Length = 478 | Back alignment and structure |
|---|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 Length = 680 | Back alignment and structure |
|---|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* Length = 471 | Back alignment and structure |
|---|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 | Back alignment and structure |
|---|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* Length = 844 | Back alignment and structure |
|---|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A Length = 683 | Back alignment and structure |
|---|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* Length = 686 | Back alignment and structure |
|---|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A Length = 585 | Back alignment and structure |
|---|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* Length = 588 | Back alignment and structure |
|---|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 Length = 583 | Back alignment and structure |
|---|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A Length = 637 | Back alignment and structure |
|---|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Length = 1108 | Back alignment and structure |
|---|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* Length = 1108 | Back alignment and structure |
|---|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A Length = 488 | Back alignment and structure |
|---|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} Length = 475 | Back alignment and structure |
|---|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} Length = 696 | Back alignment and structure |
|---|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} Length = 449 | Back alignment and structure |
|---|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* Length = 1039 | Back alignment and structure |
|---|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* Length = 1039 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* Length = 655 | Back alignment and structure |
|---|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* Length = 441 | Back alignment and structure |
|---|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A Length = 644 | Back alignment and structure |
|---|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* Length = 695 | Back alignment and structure |
|---|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* Length = 628 | Back alignment and structure |
|---|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 Length = 720 | Back alignment and structure |
|---|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* Length = 669 | Back alignment and structure |
|---|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 Length = 488 | Back alignment and structure |
|---|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} Length = 704 | Back alignment and structure |
|---|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A Length = 424 | Back alignment and structure |
|---|
| >1r7a_A Sucrose phosphorylase; beta-alpha-barrels, dimer, glycoside hydrolase, transferase; 1.77A {Bifidobacterium adolescentis} SCOP: b.71.1.1 c.1.8.1 PDB: 2gdv_A* 2gdu_A* Length = 504 | Back alignment and structure |
|---|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* Length = 637 | Back alignment and structure |
|---|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* Length = 543 | Back alignment and structure |
|---|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 Length = 558 | Back alignment and structure |
|---|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* Length = 589 | Back alignment and structure |
|---|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* Length = 557 | Back alignment and structure |
|---|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} Length = 555 | Back alignment and structure |
|---|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 Length = 570 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 807 | ||||
| d1ht6a2 | 347 | c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hor | 4e-49 | |
| d1mxga2 | 361 | c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeo | 8e-41 | |
| d2d3na2 | 394 | c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillu | 1e-40 | |
| d1gcya2 | 357 | c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan m | 2e-40 | |
| d1e43a2 | 393 | c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera | 1e-35 | |
| d1hvxa2 | 393 | c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillu | 2e-35 | |
| d1hx0a2 | 403 | c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus s | 6e-35 | |
| d1ud2a2 | 390 | c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillu | 3e-30 | |
| d1jaea2 | 378 | c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mea | 3e-29 | |
| d1g94a2 | 354 | c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoa | 2e-25 | |
| d1ua7a2 | 344 | c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillu | 2e-20 | |
| d1j0ha3 | 382 | c.1.8.1 (A:124-505) Neopullulanase, central domain | 2e-17 | |
| d1lwha2 | 391 | c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Ther | 1e-16 | |
| d1iv8a2 | 653 | c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase | 2e-16 | |
| d1wzaa2 | 409 | c.1.8.1 (A:28-436) Bacterial alpha-amylase {Haloth | 5e-16 | |
| d1g5aa2 | 554 | c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysacc | 7e-16 | |
| d1m53a2 | 478 | c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Kle | 1e-15 | |
| d1uoka2 | 479 | c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus | 7e-15 | |
| d2guya2 | 381 | c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill | 7e-15 | |
| d1bf2a3 | 475 | c.1.8.1 (A:163-637) Isoamylase, central domain {Ps | 2e-14 | |
| d1ji1a3 | 432 | c.1.8.1 (A:123-554) Maltogenic amylase, central do | 5e-14 | |
| d1m7xa3 | 396 | c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enz | 1e-13 | |
| d3bmva4 | 406 | c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase | 2e-13 | |
| d2aaaa2 | 381 | c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergill | 2e-13 | |
| d1wzla3 | 382 | c.1.8.1 (A:121-502) Maltogenic amylase, central do | 8e-13 | |
| d1eh9a3 | 400 | c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrol | 1e-12 | |
| d2bhua3 | 420 | c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydro | 6e-12 | |
| d1qhoa4 | 407 | c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase | 7e-12 | |
| d1ea9c3 | 382 | c.1.8.1 (C:122-503) Maltogenic amylase, central do | 2e-11 | |
| d1h3ga3 | 422 | c.1.8.1 (A:96-517) Cyclomaltodextrinase, central d | 4e-11 | |
| d1r7aa2 | 434 | c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobac | 2e-10 | |
| d1gjwa2 | 572 | c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga | 8e-09 | |
| d2fhfa5 | 563 | c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella p | 0.001 |
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Score = 174 bits (442), Expect = 4e-49
Identities = 134/298 (44%), Positives = 198/298 (66%), Gaps = 13/298 (4%)
Query: 509 EILCQGFNWESHK-SGRWYMELKEKATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNL- 566
++L QGFNWES K SG WY + K ++++ G + +WLPPP+ SVS EGYMP LY++
Sbjct: 2 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDID 61
Query: 567 SSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFGGRLN------WD 620
+S+YGN ELK ++ H G++ + D+V+NHRCA Y++ G++ IF G +
Sbjct: 62 ASKYGNAAELKSLIGALHGKGVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGP 121
Query: 621 DRAVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDF 680
D + G N +G +F AAP+IDH D V++++KEWL WL++++G+D WRLDF
Sbjct: 122 HMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQRELKEWLLWLKSDLGFDAWRLDF 181
Query: 681 VRGFWGGYVKDYLEATEPYFAVGEYWDSLSYTY-GEMDHNQDAHRQRIIDWINAASGTAG 739
RG+ K Y++ T P AV E WD+++ G+ +++QDAHRQ +++W++ G A
Sbjct: 182 ARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 241
Query: 740 A---FDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQVR 794
A FD TTKGIL++A++ E WRL D +GK PGV+GWWP++AVTF++NHDTGSTQ
Sbjct: 242 AGMVFDFTTKGILNAAVEG-ELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAM 298
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} Length = 361 | Back information, alignment and structure |
|---|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} Length = 394 | Back information, alignment and structure |
|---|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} Length = 357 | Back information, alignment and structure |
|---|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} Length = 393 | Back information, alignment and structure |
|---|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} Length = 393 | Back information, alignment and structure |
|---|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 403 | Back information, alignment and structure |
|---|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} Length = 390 | Back information, alignment and structure |
|---|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} Length = 378 | Back information, alignment and structure |
|---|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} Length = 354 | Back information, alignment and structure |
|---|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} Length = 344 | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} Length = 382 | Back information, alignment and structure |
|---|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} Length = 391 | Back information, alignment and structure |
|---|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 653 | Back information, alignment and structure |
|---|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} Length = 409 | Back information, alignment and structure |
|---|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} Length = 554 | Back information, alignment and structure |
|---|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} Length = 478 | Back information, alignment and structure |
|---|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} Length = 479 | Back information, alignment and structure |
|---|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} Length = 381 | Back information, alignment and structure |
|---|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} Length = 475 | Back information, alignment and structure |
|---|
| >d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} Length = 432 | Back information, alignment and structure |
|---|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} Length = 396 | Back information, alignment and structure |
|---|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} Length = 406 | Back information, alignment and structure |
|---|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} Length = 381 | Back information, alignment and structure |
|---|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} Length = 382 | Back information, alignment and structure |
|---|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} Length = 400 | Back information, alignment and structure |
|---|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} Length = 420 | Back information, alignment and structure |
|---|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} Length = 407 | Back information, alignment and structure |
|---|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} Length = 382 | Back information, alignment and structure |
|---|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} Length = 422 | Back information, alignment and structure |
|---|
| >d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} Length = 434 | Back information, alignment and structure |
|---|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} Length = 572 | Back information, alignment and structure |
|---|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} Length = 563 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 807 | |||
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 100.0 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 100.0 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 100.0 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 100.0 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 100.0 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 100.0 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 100.0 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 100.0 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 100.0 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 100.0 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 100.0 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 100.0 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 100.0 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 100.0 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 100.0 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 100.0 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 100.0 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 100.0 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 100.0 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 100.0 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 100.0 | |
| d1ji1a3 | 432 | Maltogenic amylase, central domain {Thermoactinomy | 100.0 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 100.0 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 100.0 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 100.0 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 100.0 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 100.0 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 100.0 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 100.0 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 100.0 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 100.0 | |
| d1r7aa2 | 434 | Sucrose phosphorylase {Bifidobacterium adolescenti | 100.0 | |
| d1x1na1 | 523 | Amylomaltase MalQ {Potato (Solanum tuberosum) [Tax | 98.55 | |
| d1tz7a1 | 485 | Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363] | 98.24 | |
| d1eswa_ | 500 | Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} | 98.07 | |
| d1zy9a2 | 348 | Alpha-galactosidase GalA catalytic domain {Thermot | 97.79 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 97.24 | |
| d2f2ha4 | 338 | Putative glucosidase YicI, domain 2 {Escherichia c | 97.16 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 96.87 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 96.7 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 96.52 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 96.36 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 96.23 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 95.87 | |
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 95.75 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 95.75 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 95.37 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 95.31 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 95.22 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 95.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 94.91 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 94.9 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 94.69 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 94.39 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 94.39 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 92.55 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 91.63 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 90.76 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 88.81 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 86.24 | |
| d1edta_ | 265 | Endo-beta-N-acetylglucosaminidase {Streptomyces pl | 86.06 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 83.6 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 82.11 | |
| d2ebna_ | 285 | Endo-beta-N-acetylglucosaminidase {Flavobacterium | 80.81 | |
| d1yhta1 | 344 | Dispersin B, DspB {Actinobacillus actinomycetemcom | 80.5 |
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=100.00 E-value=0 Score=376.87 Aligned_cols=277 Identities=27% Similarity=0.543 Sum_probs=207.9
Q ss_pred CEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC--CCCCCCCCCC---------CCCCCCCCHHHH
Q ss_conf 13463001034799998399999969999985999999799788899--9999854477---------558999999999
Q 003613 508 FEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPPPTESVS--PEGYMPRDLY---------NLSSRYGNIDEL 576 (807)
Q Consensus 508 ~~i~~~~F~Wd~~~~Ggdl~gI~ekLdYLk~LGvt~IyL~PIfe~~s--~hgYd~~Dy~---------~IDp~lGt~edf 576 (807)
+.+++|+|+|+++.+|++|++|++|||||++||||+|||+||+++.+ ++||++.|+| .|||+|||++||
T Consensus 2 ~~~~~q~f~w~~~~~g~~~~~i~~kLdyL~~LGv~aIwL~Pi~~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df 81 (394)
T d2d3na2 2 NGTMMQYFEWYLPNDGNHWNRLNSDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQL 81 (394)
T ss_dssp CCCEEECCCTTCCSSSCHHHHHHHHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHH
T ss_pred CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf 86278877426578897199999989999971999899795701788788897866675544344467768889999999
Q ss_pred HHHHHHHHHCCCEEEEEEEECCCCCCCCC---------CC-------CC-----CCCCC--CC----------------C
Q ss_conf 99999998859699996730444456676---------79-------85-----32369--96----------------7
Q 003613 577 KDVVNKFHDVGMKILGDVVLNHRCAHYQN---------QN-------GV-----WNIFG--GR----------------L 617 (807)
Q Consensus 577 k~LV~aaH~~GIkVILD~V~NH~g~d~~~---------~~-------g~-----~~~~~--~~----------------~ 617 (807)
++||++||++|||||+|+|+||+|..+.. +. +. |..+. +. .
T Consensus 82 ~~Lv~~aH~~GIkVilDvV~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (394)
T d2d3na2 82 QAAVTSLKNNGIQVYGDVVMNHKGGADATEMVRAVEVNPNNRNQEVTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDGV 161 (394)
T ss_dssp HHHHHHHHHTTCEEEEEECCSEECSCSEEEEEEEEEEETTEEEEECSCCEEEEEEEEBCCTTTTTSSCCCCBCGGGEEEE
T ss_pred HHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999879989999712665676643100122357654333345644434443456765567787654444457876
Q ss_pred CCCCCCCCCCC-CCCC--------CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHH
Q ss_conf 88897655799-9878--------89987779988999878889988999999999999994292599983446210899
Q 003613 618 NWDDRAVVADD-PHFQ--------GRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGY 688 (807)
Q Consensus 618 ~w~~~~~~~~~-~~f~--------~~g~~~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA~~f~~~~ 688 (807)
.|......... ..+. ..........+..+|++|+.||+|++++++++++|++++||||||+|+|+|++.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~np~V~~~~~~~~~~w~~~~giDGfR~D~a~~~~~~~ 241 (394)
T d2d3na2 162 DWDQSRRLNNRIYKFRGHGKAWDWEVDTENGNYDYLMYADIDMDHPEVVNELRNWGVWYTNTLGLDGFRIDAVKHIKYSF 241 (394)
T ss_dssp SCCTTTCCSSCEEEECSTTCCCCSSCCCTTSCCCCCSSEEECTTCHHHHHHHHHHHHHHHHHHTCSEEEETTGGGSCHHH
T ss_pred CCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHH
T ss_conf 55566688887540068887656666523234202677621558889987888765654205673147742244377678
Q ss_pred HHHHHHH----C-CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 9999983----2-9948992333697764344553224668999999862599710002024899999760173012120
Q 003613 689 VKDYLEA----T-EPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEYWRLSD 763 (807)
Q Consensus 689 i~~i~~~----~-~~~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~~al~~~~~~~l~~ 763 (807)
+++++++ . ++++++||+|... ...+..|+...+...++|||+++..+..++..++.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~gE~~~~~--------------~~~~~~~~~~~~~~~~~~df~~~~~l~~~~~~~~~~~l~~ 307 (394)
T d2d3na2 242 TRDWINHVRSATGKNMFAVAEFWKND--------------LGAIENYLQKTNWNHSVFDVPLHYNLYNASKSGGNYDMRN 307 (394)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCSC--------------HHHHHHHHHHTTTCSEEECHHHHHHHHHHHHTTTCSCGGG
T ss_pred HHHHHHHHHHHCCCCEEECCCCCCCC--------------CCCCCCHHCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 99999999874087402102123666--------------3212001003344211103789999999984076053999
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCC
Q ss_conf 0299999757687852110534577888888865544
Q 003613 764 EKGKPPGVVGWWPSRAVTFIENHDTGSTQVRSSLCST 800 (807)
Q Consensus 764 ~~~~~~~l~~~~P~~av~FieNHDt~R~~~~~~~~~~ 800 (807)
.... ......|.++++|++|||+.|..+.......
T Consensus 308 ~~~~--~~~~~~~~~~v~fl~NHD~~r~~~~~~~~~~ 342 (394)
T d2d3na2 308 IFNG--TVVQRHPSHAVTFVDNHDSQPEEALESFVEE 342 (394)
T ss_dssp TTTT--CHHHHCGGGEEECSCCTTTSTTSTTCCCCCT
T ss_pred HHHC--CCCCCCHHHEEEECCCCCCCCCCCCCCCCCH
T ss_conf 8721--5110698680576728868652445567319
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
| >d1ji1a3 c.1.8.1 (A:123-554) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]} | Back information, alignment and structure |
|---|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1r7aa2 c.1.8.1 (A:1-434) Sucrose phosphorylase {Bifidobacterium adolescentis [TaxId: 1680]} | Back information, alignment and structure |
|---|
| >d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1tz7a1 c.1.8.1 (A:1-485) Amylomaltase MalQ {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1eswa_ c.1.8.1 (A:) Amylomaltase MalQ {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
| >d1zy9a2 c.1.8.13 (A:178-525) Alpha-galactosidase GalA catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
| >d2f2ha4 c.1.8.13 (A:248-585) Putative glucosidase YicI, domain 2 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
| >d1edta_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Streptomyces plicatus, endoglycosidase H [TaxId: 1922]} | Back information, alignment and structure |
|---|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
| >d2ebna_ c.1.8.5 (A:) Endo-beta-N-acetylglucosaminidase {Flavobacterium meningosepticum, endoglycosidase F1 [TaxId: 238]} | Back information, alignment and structure |
|---|
| >d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} | Back information, alignment and structure |
|---|